FvH4_1g10290

Domain of unknown function (DUF4378)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0005501
Physical Location & Seq
Reverse (-)
5606282 .. 5611981
5700 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g10290.t1

Sequence Viewer

Length: 2676 bp
ATGGGAGGCTTATTGCACCTTTTTGATTTCAATCAAGGCAGCATGGCCAGGAAGCTTTTTGTGCATAAGAAACATGATGGTGGCCTTGATGCTCCACGAAATAGCTTGGAGATGCAAGTAGAAACTTCTCAGAGCTATTGTGACATGGGAGATTTGCCGGTGAAAGAAGTTGGTCCCAAAAAGAATTATCCACTTGAAAGTTCAATGAAGAAATTGATCAATGAGGAAATATCCAAACGCTCAAGTACCAGGCACAATGGACCAAGCATTGTGGCACGGCTTATGGGGATGGATATGTTGCCAGTGGATATAAAATCAGCAGTTCAGCCAATTGAGAATAAACATGAATATAGGAGAACAAAGTCTTCAAAGAAGGAAATGAATGGAAAGAGCTCAGTTGATCATGTCTCTTCAGACTTAAATTCATCCAGAGAGTTGGATCTCAATTCATTCTATCAAAATAATGGCACAGAGGATGCTGGATGGTGTGAAGATCAGAAAGTTGGAAAACCAAGGCGTGAAGAGCATCCTCAAGAGAAGGAACTACAGAAGTTCAAGAAAGAATTTGAAGCATGGCAAGCTGCCAGGTTTAAGGAATGTTCAAGGATTATCGAAAATGACAGCATATCAGGAGAGTTGCTTGCTCAAGAGCATCTCAACAAGGAAAAGACAGCAGTTTCTGCAAAATCCAAGCAAATGACAATTGAGAAGACTATGGAAAGAATAGATCACAGTGTAAAAGAAATCTCACACAAAAGAGGTGTTTCGTCACATCGTGTAGATGCAATGGATTTATTCCCATCTGAGTACACAAGATCTTTATCTTCAAAAAGCAGAACCAAGAGCTTAGACTTTGAGCAATCCTCCTTGTTGAATTCCAGGAAGAGAGTGAACATATCTTCAACTCCTACAAGGATAGTTATCTTAAAACCTGGTCCTGATAGCTTTTGCAACCATGAAGAGACTTGGATCAATTCTCCAAGCACTTTAGATCAGAGGGGTAGTATAGAAGATTTTCTCGAGGAGGTGAAGGACCGACTGAGATGTGAACTCCAAGGGAAGGTGCATAAAAGGGGTTCAGTTGTCCGAGGAAGTGGAATTGAGACCCCATTTAGTGAACAGCCATCTGATCCAAAGCAAATTGCTCGGCATATTGCAAACCATGTCCGAGAAAGTGTGACTAGGGATCTTGGAGTGAATTTGCTTCGATCAGAATCAACAAGATCATACAGAAGTGAAGTTCAATATGATAGAGCAGGATCCCCAGAATTTATACATAGAGATACTAGAAGGTTCCTGTTAGAGAGACTAAGAAATGTTTCAGAAAGAGAGACCGGATTTAATTCTCCTGTATTTTCTTCTGGCAGCTACGGGTCATCTGCACTAGACTATGAAAGGTTCAAAGTAAAGCAGGTGGGAGATACTTTGGAAGCTCAAAAAGATATGAGTTTCTGGGGAAGGGGAATGGTGAAAGATGACCATGTGAAAACCAGATCCTTCAGGCATGGATCAGATGACGATAAGCTGCTGGATAGAGAATTGTCCCCTAGAAATCTCATTAGGTCCTTATCTGCCCCAGTATCCGGAACATCATTTGGGAAGCTTCTTCTGGAGAACCGCCACATTTTGACTGGTGCTCACATTCGGAGAAAGCATGAAGCCATTGAACATGTGTCCTTGGATATGAAGAGTCAGAAGAAAGAAAGGTTCAATTTCAAAGAAAAGGTTTCCCATTTCAAATACAATTTTACTCTTAAGGGAAGACTGTTTGGAAAAAGAATTCAATCAGTGACTGAATCAAGCCATACTGAACATTACCCTGTGAATGACATCAGGAGTGGTCCAACAGTTATTACCAACTCTAGAGAGAGACATGATAATTTCACTGAGGTGCCTCCTAGTCCTGCATCTGTTTGCAGCACTGCTCAGGACGATTTTTGCAGGACAGCTGATTGTCTTAGTCCAGTATCGACTCCAAATGCAACTCCAAGAGATGACAGATTTGTGCCACAGGCTTTCAGAGACATCAGCGATAATCTAAGTGAACTAAGAAGACAACTGAATCAACTTGAGTCTGATGAGCCTGACGATGCATCAGGTGAACAAGAAGTGGTCGAATCTGAAATGTCTGGACTAGAGAACCCGGCAGAGGTTTACATAAAAGATTTGCTTGTTGCTTCTGGTTTGTACGATGGATCATTCGAGAAATCCTTTTCTAGATATGACACGTCTGGGAAACCCATCAGCCTCTCCGTGTTCAAAGAAGTGGAGGAATCTTATAAAAAGCTGGCCAGTGCAGACGATAACTCAACCAAAGATCACAATGGGAAGGTAAATCACAAGTTGTTCCTTGATTTATTGAACGAAGCTCTTTCAACTATTCTTGGACCTCCATTAAACATGTCTAAATTCAGAAGAAAAGCTATCAACTCTTCTGCCCTGCCACCTTTACGTGGTAAGAAGTTGTTAGATTCTGTTTGGGGGATTATCTATCGTTATGTATACCCTCCAAATGATAAACACTGTCACTCCCTGGATGAAATAGTTGCCCGGGATCTGGGATCCTCGCTGTGGTCAGAACTGGTGGAGGAAGACGTTAATATTCTTGGAAGAGAGATTGAAACTCTGATTATGAGAGATCTTGTTACAGAAGTTTTGAATGATATGAAGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4378 NTPase_1 VARLMGL

Protein Analysis

892

Amino Acids

101.36

Weight (kDa)

7.2

Isoelectric Point (pI)

52.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4378 PF14309 718 - 884 3.1e-33 Domain of unknown function (DUF4378)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2280
AarI CACCTGC 1 cut(s) 1402
Acc36I ACCTGC 1 cut(s) 1402
AccB1I GGYRCC 1 cut(s) 1891
AccI GTMKAC 1 cut(s) 2502
AccIII TCCGGA 1 cut(s) 1583
AciI CCGC 1 cut(s) 1618
AcoI YGGCCR 2 cut(s) 45, 2289
AcsI RAATTY 7 cut(s) 421, 563, 874, 1198, 1268, 1779, 2408
AcuI CTGAAG 2 cut(s) 396, 1483
AdeI CACNNNGTG 1 cut(s) 776
AfaI GTAC 3 cut(s) 247, 809, 2189
AfiI CCNNNNNNNGG 6 cut(s) 1060, 1583, 2149, 2453, 2557, 2571
AflII CTTAAG 1 cut(s) 1754
AflIII ACRYGT 3 cut(s) 1669, 2226, 2400
AjiI CACGTC 1 cut(s) 2229
AjnI CCWGG 6 cut(s) 47, 248, 584, 878, 931, 2532
AleI CACNNNNGTG 1 cut(s) 1889
Alw21I GWGCWC 2 cut(s) 395, 1639
Alw26I GTCTC 7 cut(s) 412, 956, 1097, 1300, 1325, 1864, 2016
AlwNI CAGNNNCTG 2 cut(s) 680, 1793
Ama87I CYCGRG 2 cut(s) 1019, 2550
Aor13HI TCCGGA 1 cut(s) 1583
AoxI GGCC 3 cut(s) 45, 82, 2289
ApeKI GCWGC 5 cut(s) 39, 581, 1365, 1525, 1917
ApoI RAATTY 7 cut(s) 421, 563, 874, 1198, 1268, 1779, 2408
Asp700I GAANNNNTTC 2 cut(s) 1014, 1318
AspS9I GGNCC 7 cut(s) 173, 260, 935, 1033, 1563, 1841, 2387
AsuC2I CCSGG 3 cut(s) 2144, 2551, 2552
AsuHPI GGTGA 4 cut(s) 172, 1039, 1480, 2111
AvaI CYCGRG 2 cut(s) 1019, 2550
AvaII GGWCC 7 cut(s) 173, 260, 935, 1033, 1563, 1841, 2387
BalI TGGCCA 2 cut(s) 47, 2291
BamHI GGATCC 2 cut(s) 1259, 2561
BanI GGYRCC 1 cut(s) 1891
BanII GRGCYC 1 cut(s) 395
BbsI GAAGAC 5 cut(s) 357, 716, 1768, 2059, 2598
Bbv12I GWGCWC 2 cut(s) 395, 1639
BbvI GCAGC 5 cut(s) 51, 568, 1377, 1512, 1929
BccI CCATC 7 cut(s) 71, 283, 477, 808, 1132, 2186, 2249
BceAI ACGGC 1 cut(s) 293
BcgI CGANNNNNNTGC 2 cut(s) 1127, 1161
BciT130I CCWGG 6 cut(s) 49, 250, 586, 880, 933, 2534
BciVI GTATCC 1 cut(s) 1591
BclI TGATCA 2 cut(s) 216, 400
BcnI CCSGG 3 cut(s) 2144, 2551, 2552
BcoDI GTCTC 7 cut(s) 412, 956, 1097, 1300, 1325, 1864, 2016
BfaI CTAG 8 cut(s) 1182, 1287, 1385, 1548, 1863, 1899, 2135, 2217
BfmI CTRYAG 1 cut(s) 545
BfrI CTTAAG 1 cut(s) 1754
BfuAI ACCTGC 1 cut(s) 1402
BfuI GTATCC 1 cut(s) 1591
BglII AGATCT 2 cut(s) 815, 2638
BisI GCNGC 5 cut(s) 40, 582, 1366, 1526, 1918
BlsI GCNGC 5 cut(s) 41, 583, 1367, 1527, 1919
Bme1390I CCNGG 9 cut(s) 49, 250, 586, 880, 933, 2144, 2534, 2551, 2552
Bme18I GGWCC 7 cut(s) 173, 260, 935, 1033, 1563, 1841, 2387
BmeT110I CYCGRG 2 cut(s) 1019, 2550
BmgBI CACGTC 1 cut(s) 2229
BmgT120I GGNCC 7 cut(s) 173, 260, 935, 1033, 1563, 1841, 2387
BmiI GGNNCC 5 cut(s) 175, 1261, 1295, 1893, 2563
BmrFI CCNGG 9 cut(s) 49, 250, 586, 880, 933, 2144, 2534, 2551, 2552
BmrI ACTGGG 1 cut(s) 1571
BmsI GCATC 9 cut(s) 79, 102, 466, 535, 661, 772, 1916, 2080, 2102
BmuI ACTGGG 1 cut(s) 1571
BpiI GAAGAC 5 cut(s) 357, 716, 1768, 2059, 2598
BplI GAGNNNNNCTC 2 cut(s) 848, 880
BpmI CTGGAG 1 cut(s) 1631
Bpu10I CCTNAGC 1 cut(s) 1926
BpuEI CTTGAG 4 cut(s) 226, 516, 630, 2090
BpuMI CCSGG 3 cut(s) 2144, 2551, 2552
BsaAI YACGTR 1 cut(s) 2453
BsaBI GATNNNNATC 4 cut(s) 30, 820, 920, 1213
BsaI GGTCTC 2 cut(s) 1097, 1325
BsaJI CCNNGG 6 cut(s) 512, 1054, 1087, 1677, 2532, 2550
BsaWI WCCGGW 2 cut(s) 1334, 1583
BsaXI ACNNNNNCTCC 2 cut(s) 2513, 2543
Bsc4I CCNNNNNNNGG 6 cut(s) 1060, 1583, 2149, 2453, 2557, 2571
Bse118I RCCGGY 1 cut(s) 157
Bse1I ACTGG 6 cut(s) 302, 1577, 1636, 1964, 2292, 2586
Bse3DI GCAATG 1 cut(s) 792
Bse8I GATNNNNATC 4 cut(s) 30, 820, 920, 1213
BseAI TCCGGA 1 cut(s) 1583
BseBI CCWGG 6 cut(s) 49, 250, 586, 880, 933, 2534
BseDI CCNNGG 6 cut(s) 512, 1054, 1087, 1677, 2532, 2550
BseGI GGATG 6 cut(s) 294, 425, 481, 488, 526, 2542
BseJI GATNNNNATC 4 cut(s) 30, 820, 920, 1213
BseLI CCNNNNNNNGG 6 cut(s) 1060, 1583, 2149, 2453, 2557, 2571
BseMI GCAATG 1 cut(s) 792
BseMII CTCAG 6 cut(s) 143, 408, 795, 1031, 1878, 1940
BseNI ACTGG 6 cut(s) 302, 1577, 1636, 1964, 2292, 2586
BseRI GAGGAG 1 cut(s) 1037
BseXI GCAGC 5 cut(s) 51, 568, 1377, 1512, 1929
BsgI GTGCAG 2 cut(s) 1365, 2316
BshFI GGCC 3 cut(s) 47, 84, 2291
BshNI GGYRCC 1 cut(s) 1891
BsiHKAI GWGCWC 2 cut(s) 395, 1639
BsiHKCI CYCGRG 2 cut(s) 1019, 2550
BsiSI CCGG 5 cut(s) 158, 1335, 1584, 2144, 2551
BslFI GGGAC 2 cut(s) 159, 1528
BslI CCNNNNNNNGG 6 cut(s) 1060, 1583, 2149, 2453, 2557, 2571
BsmAI GTCTC 7 cut(s) 412, 956, 1097, 1300, 1325, 1864, 2016
BsmFI GGGAC 2 cut(s) 159, 1528
BsnI GGCC 3 cut(s) 47, 84, 2291
Bso31I GGTCTC 2 cut(s) 1097, 1325
BsoBI CYCGRG 2 cut(s) 1019, 2550
Bsp1286I GDGCHC 2 cut(s) 395, 1639
Bsp13I TCCGGA 1 cut(s) 1583
BspACI CCGC 1 cut(s) 1618
BspANI GGCC 3 cut(s) 47, 84, 2291
BspCNI CTCAG 6 cut(s) 142, 407, 796, 1032, 1879, 1939
BspEI TCCGGA 1 cut(s) 1583
BspLI GGNNCC 5 cut(s) 175, 1261, 1295, 1893, 2563
BspMI ACCTGC 1 cut(s) 1402
BspQI GCTCTTC 1 cut(s) 516
BspT107I GGYRCC 1 cut(s) 1891
BspTI CTTAAG 1 cut(s) 1754
BspTNI GGTCTC 2 cut(s) 1097, 1325
BsrDI GCAATG 1 cut(s) 792
BsrFI RCCGGY 1 cut(s) 157
BsrI ACTGG 6 cut(s) 302, 1577, 1636, 1964, 2292, 2586
BssAI RCCGGY 1 cut(s) 157
BssECI CCNNGG 6 cut(s) 512, 1054, 1087, 1677, 2532, 2550
BssNAI GTATAC 1 cut(s) 2503
BssT1I CCWWGG 3 cut(s) 512, 1054, 1677
Bst1107I GTATAC 1 cut(s) 2503
Bst2UI CCWGG 6 cut(s) 49, 250, 586, 880, 933, 2534
Bst4CI ACNGT 4 cut(s) 734, 1767, 1849, 2525
Bst6I CTCTTC 7 cut(s) 415, 516, 878, 954, 1682, 2437, 2605
BstAFI CTTAAG 1 cut(s) 1754
BstAPI GCANNNNNTGC 1 cut(s) 680
BstBAI YACGTR 1 cut(s) 2453
BstC8I GCNNGC 3 cut(s) 579, 642, 2289
BstF5I GGATG 6 cut(s) 294, 425, 481, 488, 526, 2542
BstMAI GTCTC 7 cut(s) 412, 956, 1097, 1300, 1325, 1864, 2016
BstMWI GCNNNNNNNGC 4 cut(s) 61, 523, 578, 680
BstNI CCWGG 6 cut(s) 49, 250, 586, 880, 933, 2534
BstNSI RCATGY 2 cut(s) 1673, 2404
BstSCI CCNGG 9 cut(s) 47, 248, 584, 878, 931, 2142, 2532, 2549, 2550
BstSFI CTRYAG 1 cut(s) 545
BstV1I GCAGC 5 cut(s) 51, 568, 1377, 1512, 1929
BstV2I GAAGAC 5 cut(s) 357, 716, 1768, 2059, 2598
BstX2I RGATCY 8 cut(s) 439, 815, 1186, 1259, 1493, 2554, 2561, 2638
BstXI CCANNNNNNTGG 1 cut(s) 436
BstYI RGATCY 8 cut(s) 439, 815, 1186, 1259, 1493, 2554, 2561, 2638
BstZ17I GTATAC 1 cut(s) 2503
BsuI GTATCC 1 cut(s) 1591
BsuRI GGCC 3 cut(s) 47, 84, 2291
BtrI CACGTC 1 cut(s) 2229
BtsCI GGATG 6 cut(s) 294, 425, 481, 488, 526, 2542
BtsI GCAGTG 1 cut(s) 1920
BtsIMutI CAGTG 7 cut(s) 309, 739, 1794, 1884, 1920, 2299, 2521
BveI ACCTGC 1 cut(s) 1402
Cac8I GCNNGC 3 cut(s) 579, 642, 2289
CaiI CAGNNNCTG 2 cut(s) 680, 1793
Cfr10I RCCGGY 1 cut(s) 157
Cfr13I GGNCC 7 cut(s) 173, 260, 935, 1033, 1563, 1841, 2387
Cfr9I CCCGGG 1 cut(s) 2550
CsiI ACCWGGT 1 cut(s) 931
Csp6I GTAC 3 cut(s) 246, 808, 2188
CspCI CAANNNNNGTGG 2 cut(s) 252, 287
CviQI GTAC 3 cut(s) 246, 808, 2188
DraIII CACNNNGTG 1 cut(s) 776
EaeI YGGCCR 2 cut(s) 45, 2289
Eam1104I CTCTTC 7 cut(s) 415, 516, 878, 954, 1682, 2437, 2605
EarI CTCTTC 7 cut(s) 415, 516, 878, 954, 1682, 2437, 2605
Ecl136II GAGCTC 1 cut(s) 393
Eco130I CCWWGG 3 cut(s) 512, 1054, 1677
Eco24I GRGCYC 1 cut(s) 395
Eco31I GGTCTC 2 cut(s) 1097, 1325
Eco47I GGWCC 7 cut(s) 173, 260, 935, 1033, 1563, 1841, 2387
Eco53kI GAGCTC 1 cut(s) 393
Eco57I CTGAAG 2 cut(s) 396, 1483
Eco88I CYCGRG 2 cut(s) 1019, 2550
EcoICRI GAGCTC 1 cut(s) 393
EcoO109I RGGNCCY 1 cut(s) 1563
EcoRI GAATTC 2 cut(s) 874, 1779
EcoRII CCWGG 6 cut(s) 47, 248, 584, 878, 931, 2532
EcoT14I CCWWGG 3 cut(s) 512, 1054, 1677
EcoT22I ATGCAT 1 cut(s) 2095
EcoT38I GRGCYC 1 cut(s) 395
ErhI CCWWGG 3 cut(s) 512, 1054, 1677
FalI AAGNNNNNCTT 2 cut(s) 2154, 2186
FaqI GGGAC 2 cut(s) 159, 1528
FbaI TGATCA 2 cut(s) 216, 400
FblI GTMKAC 1 cut(s) 2502
Fnu4HI GCNGC 5 cut(s) 40, 582, 1366, 1526, 1918
FokI GGATG 6 cut(s) 301, 412, 488, 495, 513, 2549
FriOI GRGCYC 1 cut(s) 395
Fsp4HI GCNGC 5 cut(s) 40, 582, 1366, 1526, 1918
FspBI CTAG 8 cut(s) 1182, 1287, 1385, 1548, 1863, 1899, 2135, 2217
GluI GCNGC 5 cut(s) 40, 582, 1366, 1526, 1918
GsuI CTGGAG 1 cut(s) 1631
HaeIII GGCC 3 cut(s) 47, 84, 2291
HapII CCGG 5 cut(s) 158, 1335, 1584, 2144, 2551
HindIII AAGCTT 2 cut(s) 53, 1601
HinfI GANTC 9 cut(s) 1214, 1690, 1796, 1972, 2062, 2072, 2117, 2273, 2471
HpaII CCGG 5 cut(s) 158, 1335, 1584, 2144, 2551
HphI GGTGA 4 cut(s) 172, 1039, 1480, 2111
Hpy166II GTNNAC 8 cut(s) 810, 892, 1049, 1118, 2045, 2102, 2155, 2503
Hpy8I GTNNAC 8 cut(s) 810, 892, 1049, 1118, 2045, 2102, 2155, 2503
HpyAV CCTTC 8 cut(s) 367, 532, 1024, 1054, 1284, 1452, 1507, 2323
HpyCH4III ACNGT 4 cut(s) 734, 1767, 1849, 2525
HpyCH4IV ACGT 3 cut(s) 2228, 2452, 2595
HpyF10VI GCNNNNNNNGC 4 cut(s) 61, 523, 578, 680
HpySE526I ACGT 3 cut(s) 2228, 2452, 2595
Kpn2I TCCGGA 1 cut(s) 1583
Ksp22I TGATCA 2 cut(s) 216, 400
LguI GCTCTTC 1 cut(s) 516
LmnI GCTCC 1 cut(s) 97
Lsp1109I GCAGC 5 cut(s) 51, 568, 1377, 1512, 1929
LweI GCATC 9 cut(s) 79, 102, 466, 535, 661, 772, 1916, 2080, 2102
MabI ACCWGGT 1 cut(s) 931
MaeI CTAG 8 cut(s) 1182, 1287, 1385, 1548, 1863, 1899, 2135, 2217
MaeII ACGT 3 cut(s) 2228, 2452, 2595
MaeIII GTNAC 6 cut(s) 140, 768, 1177, 1789, 2525, 2644
MfeI CAATTG 2 cut(s) 330, 702
MflI RGATCY 8 cut(s) 439, 815, 1186, 1259, 1493, 2554, 2561, 2638
MhlI GDGCHC 2 cut(s) 395, 1639
MlsI TGGCCA 2 cut(s) 47, 2291
MluNI TGGCCA 2 cut(s) 47, 2291
MlyI GAGTC 3 cut(s) 1699, 1966, 2081
MmeI TCCRAC 3 cut(s) 417, 484, 1868
Mox20I TGGCCA 2 cut(s) 47, 2291
Mph1103I ATGCAT 1 cut(s) 2095
MroI TCCGGA 1 cut(s) 1583
MroXI GAANNNNTTC 2 cut(s) 1014, 1318
MscI TGGCCA 2 cut(s) 47, 2291
MseI TTAA 7 cut(s) 419, 591, 926, 1341, 1755, 2396, 2598
MslI CAYNNNNRTG 2 cut(s) 78, 1889
Msp20I TGGCCA 2 cut(s) 47, 2291
MspA1I CMGCKG 1 cut(s) 1949
MspCI CTTAAG 1 cut(s) 1754
MspI CCGG 5 cut(s) 158, 1335, 1584, 2144, 2551
MspR9I CCNGG 9 cut(s) 49, 250, 586, 880, 933, 2144, 2534, 2551, 2552
MunI CAATTG 2 cut(s) 330, 702
MvaI CCWGG 6 cut(s) 49, 250, 586, 880, 933, 2534
MwoI GCNNNNNNNGC 4 cut(s) 61, 523, 578, 680
NciI CCSGG 3 cut(s) 2144, 2551, 2552
NlaIV GGNNCC 5 cut(s) 175, 1261, 1295, 1893, 2563
NmeAIII GCCGAG 1 cut(s) 1126
NmuCI GTSAC 5 cut(s) 140, 768, 1177, 1789, 2525
NsiI ATGCAT 1 cut(s) 2095
NspI RCATGY 2 cut(s) 1673, 2404
OliI CACNNNNGTG 1 cut(s) 1889
PaeR7I CTCGAG 1 cut(s) 1019
PaqCI CACCTGC 1 cut(s) 1402
PciI ACATGT 2 cut(s) 1669, 2400
PciSI GCTCTTC 1 cut(s) 516
PdmI GAANNNNTTC 2 cut(s) 1014, 1318
PfeI GAWTC 6 cut(s) 1214, 1796, 2062, 2117, 2273, 2471
PfoI TCCNGGA 1 cut(s) 878
PkrI GCNGC 5 cut(s) 41, 583, 1367, 1527, 1919
PleI GAGTC 3 cut(s) 1698, 1966, 2080
PpsI GAGTC 3 cut(s) 1698, 1966, 2080
Ppu21I YACGTR 1 cut(s) 2453
PpuMI RGGWCCY 1 cut(s) 1563
PscI ACATGT 2 cut(s) 1669, 2400
PsiI TTATAA 1 cut(s) 2280
Psp124BI GAGCTC 1 cut(s) 395
Psp5II RGGWCCY 1 cut(s) 1563
Psp6I CCWGG 6 cut(s) 47, 248, 584, 878, 931, 2532
PspGI CCWGG 6 cut(s) 47, 248, 584, 878, 931, 2532
PspN4I GGNNCC 5 cut(s) 175, 1261, 1295, 1893, 2563
PspPI GGNCC 7 cut(s) 173, 260, 935, 1033, 1563, 1841, 2387
PspPPI RGGWCCY 1 cut(s) 1563
PstNI CAGNNNCTG 2 cut(s) 680, 1793
PsuI RGATCY 8 cut(s) 439, 815, 1186, 1259, 1493, 2554, 2561, 2638
PvuII CAGCTG 1 cut(s) 1949
RsaI GTAC 3 cut(s) 247, 809, 2189
RsaNI GTAC 3 cut(s) 246, 808, 2188
RseI CAYNNNNRTG 2 cut(s) 78, 1889
SacI GAGCTC 1 cut(s) 395
SapI GCTCTTC 1 cut(s) 516
SaqAI TTAA 7 cut(s) 419, 591, 926, 1341, 1755, 2396, 2598
SatI GCNGC 5 cut(s) 40, 582, 1366, 1526, 1918
Sau96I GGNCC 7 cut(s) 173, 260, 935, 1033, 1563, 1841, 2387
SchI GAGTC 3 cut(s) 1699, 1966, 2081
ScrFI CCNGG 9 cut(s) 49, 250, 586, 880, 933, 2144, 2534, 2551, 2552
SduI GDGCHC 2 cut(s) 395, 1639
SexAI ACCWGGT 1 cut(s) 931
SfaNI GCATC 9 cut(s) 79, 102, 466, 535, 661, 772, 1916, 2080, 2102
SfcI CTRYAG 1 cut(s) 545
Sfr274I CTCGAG 1 cut(s) 1019
SinI GGWCC 7 cut(s) 173, 260, 935, 1033, 1563, 1841, 2387
SlaI CTCGAG 1 cut(s) 1019
SmaI CCCGGG 1 cut(s) 2552
SmiMI CAYNNNNRTG 2 cut(s) 78, 1889
SmlI CTYRAG 6 cut(s) 241, 531, 645, 1019, 1754, 2069
SmoI CTYRAG 6 cut(s) 241, 531, 645, 1019, 1754, 2069
SsiI CCGC 1 cut(s) 1618
SspI AATATT 1 cut(s) 2602
SspMI CTAG 8 cut(s) 1182, 1287, 1385, 1548, 1863, 1899, 2135, 2217
SstI GAGCTC 1 cut(s) 395
StyD4I CCNGG 9 cut(s) 47, 248, 584, 878, 931, 2142, 2532, 2549, 2550
StyI CCWWGG 3 cut(s) 512, 1054, 1677
TaaI ACNGT 4 cut(s) 734, 1767, 1849, 2525
TaiI ACGT 3 cut(s) 2231, 2455, 2598
TaqI TCGA 6 cut(s) 612, 1020, 1207, 1970, 2115, 2202
TaqII GACCGA 1 cut(s) 1050
TatI WGTACW 1 cut(s) 807
TfiI GAWTC 6 cut(s) 1214, 1796, 2062, 2117, 2273, 2471
Tru1I TTAA 7 cut(s) 419, 591, 926, 1341, 1755, 2396, 2598
Tru9I TTAA 7 cut(s) 419, 591, 926, 1341, 1755, 2396, 2598
TscAI CASTG 7 cut(s) 309, 739, 1794, 1891, 1927, 2299, 2528
TseFI GTSAC 5 cut(s) 140, 768, 1177, 1789, 2525
TseI GCWGC 5 cut(s) 39, 581, 1365, 1525, 1917
Tsp45I GTSAC 5 cut(s) 140, 768, 1177, 1789, 2525
TspGWI ACGGA 1 cut(s) 2242
TspMI CCCGGG 1 cut(s) 2550
TspRI CASTG 7 cut(s) 309, 739, 1794, 1891, 1927, 2299, 2528
Vha464I CTTAAG 1 cut(s) 1754
VpaK11BI GGWCC 7 cut(s) 173, 260, 935, 1033, 1563, 1841, 2387
XapI RAATTY 7 cut(s) 421, 563, 874, 1198, 1268, 1779, 2408
XbaI TCTAGA 2 cut(s) 1862, 2216
XceI RCATGY 2 cut(s) 1673, 2404
XcmI CCANNNNNNNNNTGG 1 cut(s) 1628
XhoI CTCGAG 1 cut(s) 1019
XmaI CCCGGG 1 cut(s) 2550
XmiI GTMKAC 1 cut(s) 2502
XmnI GAANNNNTTC 2 cut(s) 1014, 1318
XspI CTAG 8 cut(s) 1182, 1287, 1385, 1548, 1863, 1899, 2135, 2217
Zsp2I ATGCAT 1 cut(s) 2095
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.