Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001182.1

Orthogroup ID

OG0005501

Physical Location & Seq

Genomic Coordinates Reverse (-)

12864 .. 16873

Gene Structure 4010 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001182.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2676 bp

atgggaggcttattgcacctttttgatttcaatcagggcagcatggccaggaagctttttctgcataagaaacatgatggtggccttgatgctccacgaaatagcttggagctgcaaatagaaacttctcagagctataatgatgtgggagatttgccggtgaaagaagttggtcccaaaaagaattatccacttcaaagttcaatgaagaaattgatcaatgaggaaatatccaaacgctcaagtaccaggcacaatggaccaagcattgtggcacggcttatggggatggatatgttgccaatggatacaaaatcagcagttcagccaattgaggacaaacatgaatataggagaacgaagtcttcaaagaaggaaatcaatggaaggagctcagttgatcgtgtctcttccaacttaaattcctccagagagttagatcttgattcctgttatcaaaataatggcacagatgatgctggatggagtgaagatcagaaaattggaaaaccaaggcgtggagaacatcctcaagaggaggaactacagaagttcaagaaagaatttgaagcatggcaagctgccaggtttagggaatgttcaaggattgtcgaaaatgacaacaatcaaggtgagttgcttgctcaagagcacctcaacaaggaaaagacggcagtttctgcaaaatccaagcaaacaacaattgagaagactatggaaagaatagatcacacagtaaaagaaatctcacatgaaagaggtgtttcgtcacatcgtgtagatacaatggatttattcccacctgagtacacaagatctttatcttcaaaaggcagaaccaagagcttagactttgagcaatcctccctgatgaattccaggaagcgagtgaacatatcttctgctcctacaaggatagtaatcttaaaacctggtcctgatagcttttgcaaccatgaagagacttggatcaattccccaagcacttcagagcagaggggtagtatagaagattttcttgaggaggtgaaggatcgactgagatgtgaactccaagggaaggtgcataaaaggggttcagttgtccgaggaagtggaattgagaccccatttagtgaacagccatcggatccaaagcaaattgctcgtcacattgcaaaccaggtcagagaaagtgtgactagggatcttggagtgaatttgcttcgatcagaatcaacaagatcatacagaagtgaaattcaatataatggagcaggttctccagaattcatacatagagatactagaagattcctgttagagagactaagaaatgtttcagaaagagagacagaacttaattctcctgtattaacttctggcagctataggtcatctgcactagactatgaaagggtcagattaaaacaggtgggacatactttggaagctcaaaaagatatgagtttctgggaaagaggaatggtgaaagatgaccatgtaaaaaccagatcattcaggcatggaccagacgacgataagttgctcgatcgagagttgtcccctagaaatctcattaggtccttatctgccccagtatccggaacatcatttgggaagcttcttctggagaaccgccacattttgactggtgctcacattcagaggaagcatgaagccattgaacatgtgtccttggatatgaagagtcggaagaaagaaaggtttaatttcaaagaaaaggtttccaatttcaaatacagttttactcttaggggcagactgtttggaaaaagaattcaatcagcaactgaatcacgtcgtactgaacgttaccctatgaatgacatcaggagtggcccaacagttattaccaactctggagagagacatgataatttcaccgaggtgcctcctagtcctgcatctgtgtgcagcactgctcaggacgatttctgcaggacagctgattgtcttagtccaatatcaactccaaatgcaactccaagagaagatagacttgtgccacaggcattcagagacatcagcgataatctaagtgaactgagaaggcaattgaatcaactcgagtctgatgagccggatgatgcatctgttgaacaggaagtgatggaatctgaaatgtctggactagacaacccggcagaggtttacatacgagatttgcttgttgcttctggtctgtacgatggatcatttgagaaatccttttcgagatgggacacgtttgggaagcccatcagcctctccgtgttcaaagaagtggaggaatcttataaaaagctggccaatgatcacgatagctcaaccaaagatcacaatgggaaggcaaatcacaagttgctacttgatttgttgaacgaagctctttcaactgttcttggacctccattaaacatttctaaattcagaagaaaagctatcaacgcctctgatctgccacctttacgtggtaagaagctgttggattctgtttgggagagtatatgtcattatctataccctccaaacggtagacactatcactccctcgatgaaatagtttcccgggatctgggatcctcactgtggtcggaactggtggaggaagacattaatgttctcggaagagagattgaaactctgattatgagagatcttgttacagaagttttggatgatgtgaagttttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4378 NTPase_1 VARLMGL

Protein Analysis

891

Amino Acids

101.59

Weight (kDa)

6.76

Isoelectric Point (pI)

55.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005501)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17550 AT2G17550
fragaria_vesca	FvH4_1g10290 FvH4_1g10290 FvH4_1g10290 FvH4_1g10290 FvH4_1g10290 FvH4_1g10290 FvH4_1g10290 FvH4_1g10290 FvH4_1g10290
malus_domestica	MD02G1115000.v1.1 MD15G1231000.v1.1
prunus_persica	Prupe.7G183200_v2.0.a1 Prupe.7G183200_v2.0.a1
pyrus_communis	pycom02g08990 pycom15g20580
rosa_chinensis	RchiOBHm_Chr2g0097131
rosa_laevigata	RLG00000016705
rosa_multiflora	Rmu_sc0001182.1_g000005
rosa_roxburghii	Rroxscaffold_2G00144950
rosa_rugosa	Rorug02G0064400 Rorug02G0064500 Rorug02G0064600
rosa_samantha	Rh2AG111600 Rh2BG113600 Rh2CG115900 Rh2DG114900
rosa_wichuraiana	Rw2G008680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2280
Acc36I	ACCTGC	1 cut(s)	1247
AccB1I	GGYRCC	1 cut(s)	1891
AccB7I	CCANNNNNTGG	1 cut(s)	518
AccI	GTMKAC	1 cut(s)	2518
AccIII	TCCGGA	1 cut(s)	1583
AciI	CCGC	1 cut(s)	1618
AclI	AACGTT	1 cut(s)	1813
AclWI	GGATC	9 cut(s)	977, 1041, 1124, 1137, 1194, 2203, 2556, 2562, 2569
AcoI	YGGCCR	2 cut(s)	45, 2289
AcsI	RAATTY	8 cut(s)	421, 563, 874, 1198, 1239, 1268, 1779, 2408
AcuI	CTGAAG	1 cut(s)	972
AdeI	CACNNNGTG	1 cut(s)	776
AfaI	GTAC	4 cut(s)	247, 809, 1807, 2189
AflIII	ACRYGT	2 cut(s)	1669, 2226
AjiI	CACGTC	1 cut(s)	1802
AjnI	CCWGG	6 cut(s)	47, 248, 584, 878, 931, 1161
AleI	CACNNNNGTG	1 cut(s)	1889
Alw21I	GWGCWC	3 cut(s)	395, 654, 1639
Alw26I	GTCTC	7 cut(s)	412, 956, 1097, 1300, 1325, 1864, 2016
AlwI	GGATC	9 cut(s)	977, 1041, 1124, 1137, 1194, 2203, 2556, 2562, 2569
AlwNI	CAGNNNCTG	2 cut(s)	680, 1793
Ama87I	CYCGRG	2 cut(s)	2069, 2550
Aor13HI	TCCGGA	1 cut(s)	1583
AoxI	GGCC	4 cut(s)	45, 82, 1840, 2289
ApeKI	GCWGC	5 cut(s)	39, 112, 581, 1365, 1917
ApoI	RAATTY	8 cut(s)	421, 563, 874, 1198, 1239, 1268, 1779, 2408
ArsI	GACNNNNNNTTYG	2 cut(s)	1132, 1164
AseI	ATTAAT	1 cut(s)	2598
Asp700I	GAANNNNTTC	2 cut(s)	1014, 1318
AspS9I	GGNCC	7 cut(s)	173, 260, 935, 1508, 1563, 1841, 2387
AsuC2I	CCSGG	3 cut(s)	2144, 2551, 2552
AsuHPI	GGTGA	5 cut(s)	172, 644, 1039, 1480, 1876
AvaI	CYCGRG	2 cut(s)	2069, 2550
AvaII	GGWCC	6 cut(s)	173, 260, 935, 1508, 1563, 2387
BalI	TGGCCA	2 cut(s)	47, 2291
BamHI	GGATCC	2 cut(s)	1129, 2561
BanI	GGYRCC	1 cut(s)	1891
BanII	GRGCYC	1 cut(s)	395
BbsI	GAAGAC	3 cut(s)	357, 716, 2598
Bbv12I	GWGCWC	3 cut(s)	395, 654, 1639
BbvI	GCAGC	5 cut(s)	51, 99, 568, 1377, 1929
BccI	CCATC	8 cut(s)	71, 283, 477, 1132, 2107, 2186, 2214, 2249
BceAI	ACGGC	2 cut(s)	293, 687
BcgI	CGANNNNNNTGC	2 cut(s)	1127, 1161
BciT130I	CCWGG	6 cut(s)	49, 250, 586, 880, 933, 1163
BciVI	GTATCC	2 cut(s)	301, 1591
BclI	TGATCA	2 cut(s)	216, 2296
BcnI	CCSGG	3 cut(s)	2144, 2551, 2552
BcoDI	GTCTC	7 cut(s)	412, 956, 1097, 1300, 1325, 1864, 2016
BfaI	CTAG	6 cut(s)	1182, 1287, 1385, 1548, 1899, 2135
BfmI	CTRYAG	3 cut(s)	545, 1369, 1939
BfuAI	ACCTGC	1 cut(s)	1247
BfuI	GTATCC	2 cut(s)	301, 1591
BglII	AGATCT	3 cut(s)	439, 815, 2638
BisI	GCNGC	5 cut(s)	40, 113, 582, 1366, 1918
BlsI	GCNGC	5 cut(s)	41, 114, 583, 1367, 1919
Bme1390I	CCNGG	9 cut(s)	49, 250, 586, 880, 933, 1163, 2144, 2551, 2552
Bme18I	GGWCC	6 cut(s)	173, 260, 935, 1508, 1563, 2387
BmeT110I	CYCGRG	2 cut(s)	2069, 2550
BmgBI	CACGTC	1 cut(s)	1802
BmgT120I	GGNCC	7 cut(s)	173, 260, 935, 1508, 1563, 1841, 2387
BmiI	GGNNCC	4 cut(s)	175, 1131, 1893, 2563
BmrFI	CCNGG	9 cut(s)	49, 250, 586, 880, 933, 1163, 2144, 2551, 2552
BmrI	ACTGGG	1 cut(s)	1571
BmsI	GCATC	5 cut(s)	79, 466, 1916, 2080, 2102
BmuI	ACTGGG	1 cut(s)	1571
BpiI	GAAGAC	3 cut(s)	357, 716, 2598
BplI	GAGNNNNNCTC	2 cut(s)	848, 880
BpmI	CTGGAG	4 cut(s)	412, 1248, 1631, 1884
Bpu10I	CCTNAGC	1 cut(s)	1926
BpuEI	CTTGAG	4 cut(s)	226, 516, 630, 1040
BpuMI	CCSGG	3 cut(s)	2144, 2551, 2552
BsaAI	YACGTR	1 cut(s)	2453
BsaBI	GATNNNNATC	4 cut(s)	30, 820, 920, 1213
BsaI	GGTCTC	1 cut(s)	1097
BsaJI	CCNNGG	6 cut(s)	512, 1054, 1087, 1677, 1887, 2550
BsaWI	WCCGGW	1 cut(s)	1583
BsaXI	ACNNNNNCTCC	2 cut(s)	2513, 2543
Bse118I	RCCGGY	1 cut(s)	157
Bse1I	ACTGG	3 cut(s)	1577, 1636, 2586
Bse3DI	GCAATG	1 cut(s)	1152
Bse8I	GATNNNNATC	4 cut(s)	30, 820, 920, 1213
BseAI	TCCGGA	1 cut(s)	1583
BseBI	CCWGG	6 cut(s)	49, 250, 586, 880, 933, 1163
BseDI	CCNNGG	6 cut(s)	512, 1054, 1087, 1677, 1887, 2550
BseGI	GGATG	5 cut(s)	294, 488, 526, 2092, 2665
BseJI	GATNNNNATC	4 cut(s)	30, 820, 920, 1213
BseMI	GCAATG	1 cut(s)	1152
BseMII	CTCAG	6 cut(s)	143, 408, 795, 1031, 1940, 2039
BseNI	ACTGG	3 cut(s)	1577, 1636, 2586
BseRI	GAGGAG	2 cut(s)	551, 1037
BseXI	GCAGC	5 cut(s)	51, 99, 568, 1377, 1929
BsgI	GTGCAG	2 cut(s)	1365, 1936
Bsh1285I	CGRYCG	1 cut(s)	1534
BshFI	GGCC	4 cut(s)	47, 84, 1842, 2291
BshNI	GGYRCC	1 cut(s)	1891
BsiEI	CGRYCG	1 cut(s)	1534
BsiHKAI	GWGCWC	3 cut(s)	395, 654, 1639
BsiHKCI	CYCGRG	2 cut(s)	2069, 2550
BsiSI	CCGG	5 cut(s)	158, 1584, 2084, 2144, 2551
BslFI	GGGAC	4 cut(s)	159, 1431, 1528, 2237
BsmAI	GTCTC	7 cut(s)	412, 956, 1097, 1300, 1325, 1864, 2016
BsmFI	GGGAC	4 cut(s)	159, 1431, 1528, 2237
BsmI	GAATGC	1 cut(s)	2015
BsnI	GGCC	4 cut(s)	47, 84, 1842, 2291
Bso31I	GGTCTC	1 cut(s)	1097
BsoBI	CYCGRG	2 cut(s)	2069, 2550
Bsp1286I	GDGCHC	3 cut(s)	395, 654, 1639
Bsp13I	TCCGGA	1 cut(s)	1583
BspACI	CCGC	1 cut(s)	1618
BspANI	GGCC	4 cut(s)	47, 84, 1842, 2291
BspCNI	CTCAG	6 cut(s)	142, 407, 796, 1032, 1939, 2040
BspEI	TCCGGA	1 cut(s)	1583
BspLI	GGNNCC	4 cut(s)	175, 1131, 1893, 2563
BspMAI	CTGCAG	1 cut(s)	1943
BspMI	ACCTGC	1 cut(s)	1247
BspPI	GGATC	9 cut(s)	977, 1041, 1124, 1137, 1194, 2203, 2556, 2562, 2569
BspT107I	GGYRCC	1 cut(s)	1891
BspTNI	GGTCTC	1 cut(s)	1097
BsrDI	GCAATG	1 cut(s)	1152
BsrFI	RCCGGY	1 cut(s)	157
BsrI	ACTGG	3 cut(s)	1577, 1636, 2586
BssAI	RCCGGY	1 cut(s)	157
BssECI	CCNNGG	6 cut(s)	512, 1054, 1087, 1677, 1887, 2550
BssT1I	CCWWGG	3 cut(s)	512, 1054, 1677
Bst2UI	CCWGG	6 cut(s)	49, 250, 586, 880, 933, 1163
Bst4CI	ACNGT	7 cut(s)	736, 1745, 1767, 1849, 2380, 2516, 2571
Bst6I	CTCTTC	4 cut(s)	415, 954, 1682, 2605
BstAPI	GCANNNNNTGC	1 cut(s)	680
BstBAI	YACGTR	1 cut(s)	2453
BstC8I	GCNNGC	3 cut(s)	579, 642, 2289
BstENI	CCTNNNNNAGG	1 cut(s)	659
BstF5I	GGATG	5 cut(s)	294, 488, 526, 2092, 2665
BstMAI	GTCTC	7 cut(s)	412, 956, 1097, 1300, 1325, 1864, 2016
BstMCI	CGRYCG	1 cut(s)	1534
BstMWI	GCNNNNNNNGC	4 cut(s)	61, 578, 680, 2429
BstNI	CCWGG	6 cut(s)	49, 250, 586, 880, 933, 1163
BstNSI	RCATGY	1 cut(s)	1673
BstSCI	CCNGG	9 cut(s)	47, 248, 584, 878, 931, 1161, 2142, 2549, 2550
BstSFI	CTRYAG	3 cut(s)	545, 1369, 1939
BstV1I	GCAGC	5 cut(s)	51, 99, 568, 1377, 1929
BstV2I	GAAGAC	3 cut(s)	357, 716, 2598
BstX2I	RGATCY	7 cut(s)	439, 815, 1129, 1186, 2554, 2561, 2638
BstYI	RGATCY	7 cut(s)	439, 815, 1129, 1186, 2554, 2561, 2638
BsuI	GTATCC	2 cut(s)	301, 1591
BsuRI	GGCC	4 cut(s)	47, 84, 1842, 2291
BtrI	CACGTC	1 cut(s)	1802
BtsCI	GGATG	5 cut(s)	294, 488, 526, 2092, 2665
BtsI	GCAGTG	1 cut(s)	1920
BtsIMutI	CAGTG	2 cut(s)	1920, 2567
BveI	ACCTGC	1 cut(s)	1247
Cac8I	GCNNGC	3 cut(s)	579, 642, 2289
CaiI	CAGNNNCTG	2 cut(s)	680, 1793
Cfr10I	RCCGGY	1 cut(s)	157
Cfr13I	GGNCC	7 cut(s)	173, 260, 935, 1508, 1563, 1841, 2387
Cfr9I	CCCGGG	1 cut(s)	2550
CsiI	ACCWGGT	2 cut(s)	931, 1161
Csp6I	GTAC	4 cut(s)	246, 808, 1806, 2188
CspCI	CAANNNNNGTGG	2 cut(s)	252, 287
CviQI	GTAC	4 cut(s)	246, 808, 1806, 2188
DraIII	CACNNNGTG	1 cut(s)	776
EaeI	YGGCCR	2 cut(s)	45, 2289
Eam1104I	CTCTTC	4 cut(s)	415, 954, 1682, 2605
EarI	CTCTTC	4 cut(s)	415, 954, 1682, 2605
Ecl136II	GAGCTC	1 cut(s)	393
Eco130I	CCWWGG	3 cut(s)	512, 1054, 1677
Eco24I	GRGCYC	1 cut(s)	395
Eco31I	GGTCTC	1 cut(s)	1097
Eco47I	GGWCC	6 cut(s)	173, 260, 935, 1508, 1563, 2387
Eco53kI	GAGCTC	1 cut(s)	393
Eco57I	CTGAAG	1 cut(s)	972
Eco88I	CYCGRG	2 cut(s)	2069, 2550
EcoICRI	GAGCTC	1 cut(s)	393
EcoNI	CCTNNNNNAGG	1 cut(s)	659
EcoO109I	RGGNCCY	1 cut(s)	1563
EcoRI	GAATTC	3 cut(s)	874, 1268, 1779
EcoRII	CCWGG	6 cut(s)	47, 248, 584, 878, 931, 1161
EcoT14I	CCWWGG	3 cut(s)	512, 1054, 1677
EcoT22I	ATGCAT	1 cut(s)	2095
EcoT38I	GRGCYC	1 cut(s)	395
ErhI	CCWWGG	3 cut(s)	512, 1054, 1677
FalI	AAGNNNNNCTT	4 cut(s)	1002, 1034, 1986, 2018
FaqI	GGGAC	4 cut(s)	159, 1431, 1528, 2237
FbaI	TGATCA	2 cut(s)	216, 2296
FblI	GTMKAC	1 cut(s)	2518
Fnu4HI	GCNGC	5 cut(s)	40, 113, 582, 1366, 1918
FokI	GGATG	5 cut(s)	301, 495, 513, 2099, 2672
FriOI	GRGCYC	1 cut(s)	395
Fsp4HI	GCNGC	5 cut(s)	40, 113, 582, 1366, 1918
FspBI	CTAG	6 cut(s)	1182, 1287, 1385, 1548, 1899, 2135
GluI	GCNGC	5 cut(s)	40, 113, 582, 1366, 1918
GsuI	CTGGAG	4 cut(s)	412, 1248, 1631, 1884
HaeIII	GGCC	4 cut(s)	47, 84, 1842, 2291
HapII	CCGG	5 cut(s)	158, 1584, 2084, 2144, 2551
HindIII	AAGCTT	2 cut(s)	53, 1601
HpaII	CCGG	5 cut(s)	158, 1584, 2084, 2144, 2551
HphI	GGTGA	5 cut(s)	172, 644, 1039, 1480, 1876
Hpy166II	GTNNAC	7 cut(s)	810, 892, 1049, 1118, 2045, 2155, 2519
Hpy8I	GTNNAC	7 cut(s)	810, 892, 1049, 1118, 2045, 2155, 2519
Hpy99I	CGWCG	2 cut(s)	1520, 1806
HpyAV	CCTTC	6 cut(s)	367, 381, 1024, 1054, 2046, 2323
HpyCH4III	ACNGT	7 cut(s)	736, 1745, 1767, 1849, 2380, 2516, 2571
HpyCH4IV	ACGT	4 cut(s)	1801, 1813, 2228, 2452
HpyF10VI	GCNNNNNNNGC	4 cut(s)	61, 578, 680, 2429
HpySE526I	ACGT	4 cut(s)	1801, 1813, 2228, 2452
Kpn2I	TCCGGA	1 cut(s)	1583
Ksp22I	TGATCA	2 cut(s)	216, 2296
LmnI	GCTCC	5 cut(s)	97, 109, 390, 910, 1253
Lsp1109I	GCAGC	5 cut(s)	51, 99, 568, 1377, 1929
LweI	GCATC	5 cut(s)	79, 466, 1916, 2080, 2102
MabI	ACCWGGT	2 cut(s)	931, 1161
MaeI	CTAG	6 cut(s)	1182, 1287, 1385, 1548, 1899, 2135
MaeII	ACGT	4 cut(s)	1801, 1813, 2228, 2452
MaeIII	GTNAC	5 cut(s)	768, 1148, 1177, 1814, 2644
MfeI	CAATTG	3 cut(s)	330, 702, 2057
MflI	RGATCY	7 cut(s)	439, 815, 1129, 1186, 2554, 2561, 2638
MhlI	GDGCHC	3 cut(s)	395, 654, 1639
MlsI	TGGCCA	2 cut(s)	47, 2291
MluNI	TGGCCA	2 cut(s)	47, 2291
MlyI	GAGTC	2 cut(s)	1699, 2081
MmeI	TCCRAC	4 cut(s)	438, 1673, 2448, 2556
Mox20I	TGGCCA	2 cut(s)	47, 2291
Mph1103I	ATGCAT	1 cut(s)	2095
MroI	TCCGGA	1 cut(s)	1583
MroXI	GAANNNNTTC	2 cut(s)	1014, 1318
MscI	TGGCCA	2 cut(s)	47, 2291
MseI	TTAA	8 cut(s)	419, 926, 1341, 1355, 1406, 1710, 2396, 2598
MslI	CAYNNNNRTG	3 cut(s)	78, 1889, 1912
Msp20I	TGGCCA	2 cut(s)	47, 2291
MspA1I	CMGCKG	1 cut(s)	1949
MspI	CCGG	5 cut(s)	158, 1584, 2084, 2144, 2551
MspR9I	CCNGG	9 cut(s)	49, 250, 586, 880, 933, 1163, 2144, 2551, 2552
MunI	CAATTG	3 cut(s)	330, 702, 2057
Mva1269I	GAATGC	1 cut(s)	2015
MvaI	CCWGG	6 cut(s)	49, 250, 586, 880, 933, 1163
MwoI	GCNNNNNNNGC	4 cut(s)	61, 578, 680, 2429
NciI	CCSGG	3 cut(s)	2144, 2551, 2552
NlaIV	GGNNCC	4 cut(s)	175, 1131, 1893, 2563
NmuCI	GTSAC	3 cut(s)	768, 1148, 1177
NsiI	ATGCAT	1 cut(s)	2095
NspI	RCATGY	1 cut(s)	1673
OliI	CACNNNNGTG	1 cut(s)	1889
PaeR7I	CTCGAG	1 cut(s)	2069
PciI	ACATGT	1 cut(s)	1669
PcsI	WCGNNNNNNNCGW	1 cut(s)	1810
PctI	GAATGC	1 cut(s)	2015
PdmI	GAANNNNTTC	2 cut(s)	1014, 1318
PfeI	GAWTC	8 cut(s)	446, 1214, 1293, 1796, 2062, 2117, 2273, 2471
PflMI	CCANNNNNTGG	1 cut(s)	518
PfoI	TCCNGGA	1 cut(s)	878
PkrI	GCNGC	5 cut(s)	41, 114, 583, 1367, 1919
Ple19I	CGATCG	1 cut(s)	1534
PleI	GAGTC	2 cut(s)	1698, 2080
PpsI	GAGTC	2 cut(s)	1698, 2080
Ppu21I	YACGTR	1 cut(s)	2453
PpuMI	RGGWCCY	1 cut(s)	1563
PscI	ACATGT	1 cut(s)	1669
PshBI	ATTAAT	1 cut(s)	2598
PsiI	TTATAA	1 cut(s)	2280
Psp124BI	GAGCTC	1 cut(s)	395
Psp1406I	AACGTT	1 cut(s)	1813
Psp5II	RGGWCCY	1 cut(s)	1563
Psp6I	CCWGG	6 cut(s)	47, 248, 584, 878, 931, 1161
PspGI	CCWGG	6 cut(s)	47, 248, 584, 878, 931, 1161
PspN4I	GGNNCC	4 cut(s)	175, 1131, 1893, 2563
PspPI	GGNCC	7 cut(s)	173, 260, 935, 1508, 1563, 1841, 2387
PspPPI	RGGWCCY	1 cut(s)	1563
PspXI	VCTCGAGB	1 cut(s)	2069
PstI	CTGCAG	1 cut(s)	1943
PstNI	CAGNNNCTG	2 cut(s)	680, 1793
PsuI	RGATCY	7 cut(s)	439, 815, 1129, 1186, 2554, 2561, 2638
PvuI	CGATCG	1 cut(s)	1534
PvuII	CAGCTG	1 cut(s)	1949
RsaI	GTAC	4 cut(s)	247, 809, 1807, 2189
RsaNI	GTAC	4 cut(s)	246, 808, 1806, 2188
RseI	CAYNNNNRTG	3 cut(s)	78, 1889, 1912
SacI	GAGCTC	1 cut(s)	395
SaqAI	TTAA	8 cut(s)	419, 926, 1341, 1355, 1406, 1710, 2396, 2598
SatI	GCNGC	5 cut(s)	40, 113, 582, 1366, 1918
Sau96I	GGNCC	7 cut(s)	173, 260, 935, 1508, 1563, 1841, 2387
SchI	GAGTC	2 cut(s)	1699, 2081
ScrFI	CCNGG	9 cut(s)	49, 250, 586, 880, 933, 1163, 2144, 2551, 2552
SduI	GDGCHC	3 cut(s)	395, 654, 1639
SexAI	ACCWGGT	2 cut(s)	931, 1161
SfaNI	GCATC	5 cut(s)	79, 466, 1916, 2080, 2102
SfcI	CTRYAG	3 cut(s)	545, 1369, 1939
Sfr274I	CTCGAG	1 cut(s)	2069
SinI	GGWCC	6 cut(s)	173, 260, 935, 1508, 1563, 2387
SlaI	CTCGAG	1 cut(s)	2069
SmaI	CCCGGG	1 cut(s)	2552
SmiMI	CAYNNNNRTG	3 cut(s)	78, 1889, 1912
SmlI	CTYRAG	5 cut(s)	241, 531, 645, 1019, 2069
SmoI	CTYRAG	5 cut(s)	241, 531, 645, 1019, 2069
SsiI	CCGC	1 cut(s)	1618
SspMI	CTAG	6 cut(s)	1182, 1287, 1385, 1548, 1899, 2135
SstI	GAGCTC	1 cut(s)	395
StyD4I	CCNGG	9 cut(s)	47, 248, 584, 878, 931, 1161, 2142, 2549, 2550
StyI	CCWWGG	3 cut(s)	512, 1054, 1677
TaaI	ACNGT	7 cut(s)	736, 1745, 1767, 1849, 2380, 2516, 2571
TaiI	ACGT	4 cut(s)	1804, 1816, 2231, 2455
TaqI	TCGA	8 cut(s)	612, 1036, 1207, 1530, 1534, 2070, 2216, 2535
TatI	WGTACW	1 cut(s)	807
TfiI	GAWTC	8 cut(s)	446, 1214, 1293, 1796, 2062, 2117, 2273, 2471
Tru1I	TTAA	8 cut(s)	419, 926, 1341, 1355, 1406, 1710, 2396, 2598
Tru9I	TTAA	8 cut(s)	419, 926, 1341, 1355, 1406, 1710, 2396, 2598
TscAI	CASTG	2 cut(s)	1927, 2574
TseFI	GTSAC	3 cut(s)	768, 1148, 1177
TseI	GCWGC	5 cut(s)	39, 112, 581, 1365, 1917
Tsp45I	GTSAC	3 cut(s)	768, 1148, 1177
TspGWI	ACGGA	1 cut(s)	2242
TspMI	CCCGGG	1 cut(s)	2550
TspRI	CASTG	2 cut(s)	1927, 2574
Van91I	CCANNNNNTGG	1 cut(s)	518
VpaK11BI	GGWCC	6 cut(s)	173, 260, 935, 1508, 1563, 2387
VspI	ATTAAT	1 cut(s)	2598
XagI	CCTNNNNNAGG	1 cut(s)	659
XapI	RAATTY	8 cut(s)	421, 563, 874, 1198, 1239, 1268, 1779, 2408
XceI	RCATGY	1 cut(s)	1673
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1628
XhoI	CTCGAG	1 cut(s)	2069
XmaI	CCCGGG	1 cut(s)	2550
XmiI	GTMKAC	1 cut(s)	2518
XmnI	GAANNNNTTC	2 cut(s)	1014, 1318
XspI	CTAG	6 cut(s)	1182, 1287, 1385, 1548, 1899, 2135
Zsp2I	ATGCAT	1 cut(s)	2095

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.