Rh2AG111600

Domain of unknown function (DUF4378)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0005501
Physical Location & Seq
Reverse (-)
9943925 .. 9947920
3996 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG111600.1

Sequence Viewer

Length: 2676 bp
ATGGGAGGCTTATTGCACCTTTTTGATTTCAATCAGGGCAGCATGGCCAGGAAGCTTTTTCTGCATAAGAAACATGATGGTGGCCTTGATGCTCCACGAAATAGCTTAGAGCTGCAAATAGAAACTTCTCAGAGCTATAATGATGTGGGAGATTTGCCGGTGAAAGAAGTTGGTCCCAAAAAGAATTATCCACTTCAAAGTTCAATGAAGAAATTGATCAATGAGGAAACATCCAAACGCTCAAGTACCAGGCACAATGGACCAAGCATTGTGGCACGGCTTATGGGGATGGATATGTTGCCAATGGATACAAAATCAGCAGTTCAGCCAATTGAGGACAAACATGAATATAGGAGAACGAAGTCTTCAAAGAAGGAAATCAATGGAAGGAGCTCAGTTGATCGTGTCTCTTCCAACTTAAATTCCTCCAGAGAGTTAGATCTTGATTCCTTTTATCAAAATAATGGCACAGATGATGCTGGATGGAGTGAAGATCAGAAAATTGGAAAACCAAGGCGTGAAGAACATCCTCAAGAGGAGGAACTACAGAAGTTCAAGAAAGAATTTGAAGCATGGCAAGCTGCCAGGTTTAGGGAATGTTCAAGGATTGTCGAAAATGACAACAATCAAGGTGAGTTGCTTGCTCAAGAGCACCTCAACAAGGAAAAGACGGCAGTTTCTGCAAAATCCAAGCAAACAACAATTGAGAAGACTATGGAAAGAATAGATCACACAGTAAAAGAAATCTCACATGAAAGAGGTGTTTCGTCACATCGTGTAGATACAATGGATTTATTCCCACCTGAGTACACAAGATCTTTATCTTCAAAAGGCAGAACCAAGAGCTTAGACTTTGAGCAATCATCCCTGATGAATTCCAGGAAGCGAGTGAACATATCTTCTGCTCCTACAAGGATAGTTATCTTAAAACCTGGTCCTGATAGCTTTTGCAACCATGAAGAGACTTGGATCAATTCCCCAAGCACTTCAGAGCAGAGGGGTAGTATAGAAGATTTTCTTGAGGAGGTGAAGGATCGACTGAGATGTGAACTCCAAGGGAAGGTGCATAAAAGGGGTTCAGTTGTCCGAGGAAGTGGAATTGAGACCCCATTTAGTGAACAGCCATCGGATCCAAAGCAAATTGCTCGTCACATTGCAAACCAGGTCAGAGAAAGTGTGACTAGGGATCTTGGAGTGAATTTGCTTCGATCAGAATCAACAAGATCATACAGCAGTGAAATTCAATATAATGGAGCAGGTTCCCCAGAATTCATACATAGAGATACTAGAAGATTCCTGTTAGAGAGACTAAGAAATGTTTCAGAAAGAGAGACAGAACGTAATTCTCCTGTATTAACTTCTGGCAGCTATAGGTCATCTGCACTAGACTATGAAAGGGTCAGATTAAAACATGTGGGACATACTTTGGAAGCTCAAAAAGATATGAGTTTCTGGGGAACAGGAATGGTGAAAGATGACCATGTAAAAACCAGATCATTCAGGCATGGACCAGATGACGATAAGTTGCTCGATCGAGAGTTGTCCCCTAGAAATCTCATTAGGTCCTTATCTGCCCCAGTATCCGGAACATCATTTGGGAAGCTTCTTCTGGAGAACCGCCACATTTTGACTGGTGCTCACATTCAGAGGAAGCATGAAGCCATTGAACATGTGTCCTTGGATATGAAGAGTCGGAAGAAAGAAAGGTTTAATTTCAAAGAAAAGGTTTCCAATTTCAAATACAGTTTTACTCTTAGGGGCAGACTGTTTGGAAAAAGAATTCAATCAGCAACTGAATCACGTCGTACTGAACGTTACCCTATGAATGACATCAGGAGTGGCCCAACAGTTATTACCAACTCTAGAGAGAGACATGATAATTTCACCGAGGTGCCTCCTAGTCCTGCATCTGTGTGCAGCACTGCTCAGGACGATTTCTGCAGGACAGCTGATTGTCTTAGTCCAATATCAACTCCAAATGCAACTCCAAGAGAAGATAGACTTGTGCCACAGGCATTCAGAGACATCAGCGATAATCTAAGTGAACTGAGAAGGCAACTGAATCAACTTGAGTCTGATGAGCCGGATGATGCATCTGTTGAACAGGAAGTGATGGAATCTGAAATGTCTGGACTAGACAACCCGGCAGAGGTTTACATACGAGATTTGCTTGTTGCTTCTGGTCTGTACGATGGATCATTTGAGAAATCCTTTTCGAGATGGGACACGTTTGGGAAGCCCATCAGCCTCTCCGTGTTCAAAGAAGTGGAGGAATCTTATAAAAAGCTGGCCAATGATCACGATAGCTCAACCAAAGATCACAATGGGAAGGCAAATCACAAGTTGCTACTTGATTTGTTGAACGAAGCTCTTTCAACTGTTCTTGGACCTCCATTAAACATTTCTAAATTCAGAAGAAAAGCTATCAACGCCTCTGACCTGCCACCTTTACGTGGTAAGAAGCTGTTGGATTCTGTTTGGGAGAGTATATGTCATTATCTATACCCTCCAAACGGTAGACACTATCACTCCCTCGATGAAATAGTTTCCCGGGATCTGGGATCCTCACCGTGGTCGGAACTGGTGGAGGAAGACTTTAATGTTCTCGGAAGAGAGATTGAAACTCTGATTATGAGAGATCTTGTTACAGAAGTTTTGGATGATGTGAAGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4378 NTPase_1 VARLMGL

Protein Analysis

891

Amino Acids

101.67

Weight (kDa)

6.78

Isoelectric Point (pI)

56.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4378 PF14309 718 - 884 8.1e-35 Domain of unknown function (DUF4378)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2280
Acc36I ACCTGC 2 cut(s) 1247, 2448
AccB1I GGYRCC 1 cut(s) 1891
AccI GTMKAC 1 cut(s) 2518
AccIII TCCGGA 1 cut(s) 1583
AciI CCGC 1 cut(s) 1618
AclI AACGTT 1 cut(s) 1813
AclWI GGATC 9 cut(s) 977, 1041, 1124, 1137, 1194, 2203, 2556, 2562, 2569
AcoI YGGCCR 2 cut(s) 45, 2289
AcsI RAATTY 8 cut(s) 421, 563, 874, 1198, 1239, 1268, 1779, 2408
AcuI CTGAAG 1 cut(s) 972
AdeI CACNNNGTG 1 cut(s) 776
AfaI GTAC 4 cut(s) 247, 809, 1807, 2189
AfiI CCNNNNNNNGG 9 cut(s) 591, 661, 1060, 1583, 2149, 2453, 2513, 2557, 2571
AflIII ACRYGT 3 cut(s) 1411, 1669, 2226
AjiI CACGTC 1 cut(s) 1802
AjnI CCWGG 6 cut(s) 47, 248, 584, 878, 931, 1161
AleI CACNNNNGTG 1 cut(s) 1889
Alw21I GWGCWC 3 cut(s) 395, 654, 1639
Alw26I GTCTC 7 cut(s) 412, 956, 1097, 1300, 1325, 1864, 2016
AlwI GGATC 9 cut(s) 977, 1041, 1124, 1137, 1194, 2203, 2556, 2562, 2569
AlwNI CAGNNNCTG 2 cut(s) 680, 1793
Ama87I CYCGRG 1 cut(s) 2550
Aor13HI TCCGGA 1 cut(s) 1583
AoxI GGCC 4 cut(s) 45, 82, 1840, 2289
ApeKI GCWGC 5 cut(s) 39, 112, 581, 1365, 1917
ApoI RAATTY 8 cut(s) 421, 563, 874, 1198, 1239, 1268, 1779, 2408
ArsI GACNNNNNNTTYG 2 cut(s) 1132, 1164
Asp700I GAANNNNTTC 2 cut(s) 1014, 1318
AspS9I GGNCC 7 cut(s) 173, 260, 935, 1508, 1563, 1841, 2387
AsuC2I CCSGG 3 cut(s) 2144, 2551, 2552
AsuHPI GGTGA 6 cut(s) 172, 644, 1039, 1480, 1876, 2559
AvaI CYCGRG 1 cut(s) 2550
AvaII GGWCC 6 cut(s) 173, 260, 935, 1508, 1563, 2387
BalI TGGCCA 2 cut(s) 47, 2291
BamHI GGATCC 2 cut(s) 1129, 2561
BanI GGYRCC 1 cut(s) 1891
BanII GRGCYC 1 cut(s) 395
BbsI GAAGAC 3 cut(s) 357, 716, 2598
Bbv12I GWGCWC 3 cut(s) 395, 654, 1639
BbvI GCAGC 5 cut(s) 51, 99, 568, 1377, 1929
BccI CCATC 8 cut(s) 71, 283, 477, 1132, 2107, 2186, 2214, 2249
BceAI ACGGC 2 cut(s) 293, 687
BcgI CGANNNNNNTGC 2 cut(s) 1127, 1161
BciT130I CCWGG 6 cut(s) 49, 250, 586, 880, 933, 1163
BciVI GTATCC 2 cut(s) 301, 1591
BclI TGATCA 2 cut(s) 216, 2296
BcnI CCSGG 3 cut(s) 2144, 2551, 2552
BcoDI GTCTC 7 cut(s) 412, 956, 1097, 1300, 1325, 1864, 2016
BfaI CTAG 7 cut(s) 1182, 1287, 1385, 1548, 1863, 1899, 2135
BfmI CTRYAG 3 cut(s) 545, 1369, 1939
BfuAI ACCTGC 2 cut(s) 1247, 2448
BfuI GTATCC 2 cut(s) 301, 1591
BglII AGATCT 3 cut(s) 439, 815, 2638
BisI GCNGC 5 cut(s) 40, 113, 582, 1366, 1918
BlsI GCNGC 5 cut(s) 41, 114, 583, 1367, 1919
Bme1390I CCNGG 9 cut(s) 49, 250, 586, 880, 933, 1163, 2144, 2551, 2552
Bme18I GGWCC 6 cut(s) 173, 260, 935, 1508, 1563, 2387
BmeT110I CYCGRG 1 cut(s) 2550
BmgBI CACGTC 1 cut(s) 1802
BmgT120I GGNCC 7 cut(s) 173, 260, 935, 1508, 1563, 1841, 2387
BmiI GGNNCC 5 cut(s) 175, 1131, 1261, 1893, 2563
BmrFI CCNGG 9 cut(s) 49, 250, 586, 880, 933, 1163, 2144, 2551, 2552
BmrI ACTGGG 1 cut(s) 1571
BmsI GCATC 5 cut(s) 79, 466, 1916, 2080, 2102
BmuI ACTGGG 1 cut(s) 1571
BpiI GAAGAC 3 cut(s) 357, 716, 2598
BpmI CTGGAG 2 cut(s) 412, 1631
Bpu10I CCTNAGC 1 cut(s) 1926
BpuEI CTTGAG 5 cut(s) 226, 516, 630, 1040, 2090
BpuMI CCSGG 3 cut(s) 2144, 2551, 2552
BsaAI YACGTR 1 cut(s) 2453
BsaBI GATNNNNATC 4 cut(s) 30, 820, 920, 1213
BsaI GGTCTC 1 cut(s) 1097
BsaJI CCNNGG 7 cut(s) 512, 1054, 1087, 1677, 1887, 2550, 2570
BsaWI WCCGGW 1 cut(s) 1583
BsaXI ACNNNNNCTCC 2 cut(s) 2513, 2543
Bsc4I CCNNNNNNNGG 9 cut(s) 591, 661, 1060, 1583, 2149, 2453, 2513, 2557, 2571
Bse118I RCCGGY 1 cut(s) 157
Bse1I ACTGG 3 cut(s) 1577, 1636, 2586
Bse3DI GCAATG 1 cut(s) 1152
Bse8I GATNNNNATC 4 cut(s) 30, 820, 920, 1213
BseAI TCCGGA 1 cut(s) 1583
BseBI CCWGG 6 cut(s) 49, 250, 586, 880, 933, 1163
BseDI CCNNGG 7 cut(s) 512, 1054, 1087, 1677, 1887, 2550, 2570
BseGI GGATG 7 cut(s) 230, 294, 488, 526, 863, 2092, 2665
BseJI GATNNNNATC 4 cut(s) 30, 820, 920, 1213
BseLI CCNNNNNNNGG 9 cut(s) 591, 661, 1060, 1583, 2149, 2453, 2513, 2557, 2571
BseMI GCAATG 1 cut(s) 1152
BseMII CTCAG 6 cut(s) 143, 408, 795, 1031, 1940, 2039
BseNI ACTGG 3 cut(s) 1577, 1636, 2586
BseRI GAGGAG 2 cut(s) 551, 1037
BseXI GCAGC 5 cut(s) 51, 99, 568, 1377, 1929
BsgI GTGCAG 2 cut(s) 1365, 1936
Bsh1285I CGRYCG 1 cut(s) 1534
BshFI GGCC 4 cut(s) 47, 84, 1842, 2291
BshNI GGYRCC 1 cut(s) 1891
BsiEI CGRYCG 1 cut(s) 1534
BsiHKAI GWGCWC 3 cut(s) 395, 654, 1639
BsiHKCI CYCGRG 1 cut(s) 2550
BsiSI CCGG 5 cut(s) 158, 1584, 2084, 2144, 2551
BslFI GGGAC 4 cut(s) 159, 1431, 1528, 2237
BslI CCNNNNNNNGG 9 cut(s) 591, 661, 1060, 1583, 2149, 2453, 2513, 2557, 2571
BsmAI GTCTC 7 cut(s) 412, 956, 1097, 1300, 1325, 1864, 2016
BsmFI GGGAC 4 cut(s) 159, 1431, 1528, 2237
BsmI GAATGC 1 cut(s) 2015
BsnI GGCC 4 cut(s) 47, 84, 1842, 2291
Bso31I GGTCTC 1 cut(s) 1097
BsoBI CYCGRG 1 cut(s) 2550
Bsp1286I GDGCHC 3 cut(s) 395, 654, 1639
Bsp13I TCCGGA 1 cut(s) 1583
BspACI CCGC 1 cut(s) 1618
BspANI GGCC 4 cut(s) 47, 84, 1842, 2291
BspCNI CTCAG 6 cut(s) 142, 407, 796, 1032, 1939, 2040
BspEI TCCGGA 1 cut(s) 1583
BspLI GGNNCC 5 cut(s) 175, 1131, 1261, 1893, 2563
BspMAI CTGCAG 1 cut(s) 1943
BspMI ACCTGC 2 cut(s) 1247, 2448
BspPI GGATC 9 cut(s) 977, 1041, 1124, 1137, 1194, 2203, 2556, 2562, 2569
BspT107I GGYRCC 1 cut(s) 1891
BspTNI GGTCTC 1 cut(s) 1097
BsrDI GCAATG 1 cut(s) 1152
BsrFI RCCGGY 1 cut(s) 157
BsrI ACTGG 3 cut(s) 1577, 1636, 2586
BssAI RCCGGY 1 cut(s) 157
BssECI CCNNGG 7 cut(s) 512, 1054, 1087, 1677, 1887, 2550, 2570
BssT1I CCWWGG 3 cut(s) 512, 1054, 1677
Bst2UI CCWGG 6 cut(s) 49, 250, 586, 880, 933, 1163
Bst4CI ACNGT 7 cut(s) 736, 1745, 1767, 1849, 2380, 2516, 2571
Bst6I CTCTTC 4 cut(s) 415, 954, 1682, 2605
BstAPI GCANNNNNTGC 1 cut(s) 680
BstBAI YACGTR 1 cut(s) 2453
BstC8I GCNNGC 3 cut(s) 579, 642, 2289
BstDSI CCRYGG 1 cut(s) 2570
BstENI CCTNNNNNAGG 1 cut(s) 659
BstF5I GGATG 7 cut(s) 230, 294, 488, 526, 863, 2092, 2665
BstMAI GTCTC 7 cut(s) 412, 956, 1097, 1300, 1325, 1864, 2016
BstMCI CGRYCG 1 cut(s) 1534
BstMWI GCNNNNNNNGC 4 cut(s) 61, 578, 680, 2429
BstNI CCWGG 6 cut(s) 49, 250, 586, 880, 933, 1163
BstNSI RCATGY 2 cut(s) 1415, 1673
BstSCI CCNGG 9 cut(s) 47, 248, 584, 878, 931, 1161, 2142, 2549, 2550
BstSFI CTRYAG 3 cut(s) 545, 1369, 1939
BstV1I GCAGC 5 cut(s) 51, 99, 568, 1377, 1929
BstV2I GAAGAC 3 cut(s) 357, 716, 2598
BstX2I RGATCY 7 cut(s) 439, 815, 1129, 1186, 2554, 2561, 2638
BstYI RGATCY 7 cut(s) 439, 815, 1129, 1186, 2554, 2561, 2638
BsuI GTATCC 2 cut(s) 301, 1591
BsuRI GGCC 4 cut(s) 47, 84, 1842, 2291
BtgI CCRYGG 1 cut(s) 2570
BtrI CACGTC 1 cut(s) 1802
BtsCI GGATG 7 cut(s) 230, 294, 488, 526, 863, 2092, 2665
BtsI GCAGTG 2 cut(s) 1240, 1920
BtsIMutI CAGTG 2 cut(s) 1240, 1920
BveI ACCTGC 2 cut(s) 1247, 2448
Cac8I GCNNGC 3 cut(s) 579, 642, 2289
CaiI CAGNNNCTG 2 cut(s) 680, 1793
Cfr10I RCCGGY 1 cut(s) 157
Cfr13I GGNCC 7 cut(s) 173, 260, 935, 1508, 1563, 1841, 2387
Cfr9I CCCGGG 1 cut(s) 2550
CsiI ACCWGGT 2 cut(s) 931, 1161
Csp6I GTAC 4 cut(s) 246, 808, 1806, 2188
CspCI CAANNNNNGTGG 2 cut(s) 252, 287
CviQI GTAC 4 cut(s) 246, 808, 1806, 2188
DraIII CACNNNGTG 1 cut(s) 776
EaeI YGGCCR 2 cut(s) 45, 2289
Eam1104I CTCTTC 4 cut(s) 415, 954, 1682, 2605
EarI CTCTTC 4 cut(s) 415, 954, 1682, 2605
Ecl136II GAGCTC 1 cut(s) 393
Eco130I CCWWGG 3 cut(s) 512, 1054, 1677
Eco24I GRGCYC 1 cut(s) 395
Eco31I GGTCTC 1 cut(s) 1097
Eco47I GGWCC 6 cut(s) 173, 260, 935, 1508, 1563, 2387
Eco53kI GAGCTC 1 cut(s) 393
Eco57I CTGAAG 1 cut(s) 972
Eco88I CYCGRG 1 cut(s) 2550
EcoICRI GAGCTC 1 cut(s) 393
EcoNI CCTNNNNNAGG 1 cut(s) 659
EcoO109I RGGNCCY 1 cut(s) 1563
EcoRI GAATTC 3 cut(s) 874, 1268, 1779
EcoRII CCWGG 6 cut(s) 47, 248, 584, 878, 931, 1161
EcoT14I CCWWGG 3 cut(s) 512, 1054, 1677
EcoT22I ATGCAT 1 cut(s) 2095
EcoT38I GRGCYC 1 cut(s) 395
ErhI CCWWGG 3 cut(s) 512, 1054, 1677
FalI AAGNNNNNCTT 4 cut(s) 1002, 1034, 1986, 2018
FaqI GGGAC 4 cut(s) 159, 1431, 1528, 2237
FbaI TGATCA 2 cut(s) 216, 2296
FblI GTMKAC 1 cut(s) 2518
Fnu4HI GCNGC 5 cut(s) 40, 113, 582, 1366, 1918
FokI GGATG 7 cut(s) 217, 301, 495, 513, 850, 2099, 2672
FriOI GRGCYC 1 cut(s) 395
Fsp4HI GCNGC 5 cut(s) 40, 113, 582, 1366, 1918
FspBI CTAG 7 cut(s) 1182, 1287, 1385, 1548, 1863, 1899, 2135
GluI GCNGC 5 cut(s) 40, 113, 582, 1366, 1918
GsuI CTGGAG 2 cut(s) 412, 1631
HaeIII GGCC 4 cut(s) 47, 84, 1842, 2291
HapII CCGG 5 cut(s) 158, 1584, 2084, 2144, 2551
HindIII AAGCTT 2 cut(s) 53, 1601
HpaII CCGG 5 cut(s) 158, 1584, 2084, 2144, 2551
HphI GGTGA 6 cut(s) 172, 644, 1039, 1480, 1876, 2559
Hpy166II GTNNAC 7 cut(s) 810, 892, 1049, 1118, 2045, 2155, 2519
Hpy8I GTNNAC 7 cut(s) 810, 892, 1049, 1118, 2045, 2155, 2519
Hpy99I CGWCG 1 cut(s) 1806
HpyAV CCTTC 6 cut(s) 367, 381, 1024, 1054, 2046, 2323
HpyCH4III ACNGT 7 cut(s) 736, 1745, 1767, 1849, 2380, 2516, 2571
HpyCH4IV ACGT 5 cut(s) 1339, 1801, 1813, 2228, 2452
HpyF10VI GCNNNNNNNGC 4 cut(s) 61, 578, 680, 2429
HpySE526I ACGT 5 cut(s) 1339, 1801, 1813, 2228, 2452
Kpn2I TCCGGA 1 cut(s) 1583
Ksp22I TGATCA 2 cut(s) 216, 2296
LmnI GCTCC 4 cut(s) 97, 390, 910, 1253
Lsp1109I GCAGC 5 cut(s) 51, 99, 568, 1377, 1929
LweI GCATC 5 cut(s) 79, 466, 1916, 2080, 2102
MabI ACCWGGT 2 cut(s) 931, 1161
MaeI CTAG 7 cut(s) 1182, 1287, 1385, 1548, 1863, 1899, 2135
MaeII ACGT 5 cut(s) 1339, 1801, 1813, 2228, 2452
MaeIII GTNAC 5 cut(s) 768, 1148, 1177, 1814, 2644
MfeI CAATTG 2 cut(s) 330, 702
MflI RGATCY 7 cut(s) 439, 815, 1129, 1186, 2554, 2561, 2638
MhlI GDGCHC 3 cut(s) 395, 654, 1639
MlsI TGGCCA 2 cut(s) 47, 2291
MluNI TGGCCA 2 cut(s) 47, 2291
MlyI GAGTC 2 cut(s) 1699, 2081
MmeI TCCRAC 4 cut(s) 438, 1673, 2448, 2556
Mox20I TGGCCA 2 cut(s) 47, 2291
Mph1103I ATGCAT 1 cut(s) 2095
MroI TCCGGA 1 cut(s) 1583
MroXI GAANNNNTTC 2 cut(s) 1014, 1318
MscI TGGCCA 2 cut(s) 47, 2291
MseI TTAA 7 cut(s) 419, 926, 1355, 1406, 1710, 2396, 2598
MslI CAYNNNNRTG 3 cut(s) 78, 1889, 1912
Msp20I TGGCCA 2 cut(s) 47, 2291
MspA1I CMGCKG 1 cut(s) 1949
MspI CCGG 5 cut(s) 158, 1584, 2084, 2144, 2551
MspR9I CCNGG 9 cut(s) 49, 250, 586, 880, 933, 1163, 2144, 2551, 2552
MunI CAATTG 2 cut(s) 330, 702
Mva1269I GAATGC 1 cut(s) 2015
MvaI CCWGG 6 cut(s) 49, 250, 586, 880, 933, 1163
MwoI GCNNNNNNNGC 4 cut(s) 61, 578, 680, 2429
NciI CCSGG 3 cut(s) 2144, 2551, 2552
NlaIV GGNNCC 5 cut(s) 175, 1131, 1261, 1893, 2563
NmuCI GTSAC 3 cut(s) 768, 1148, 1177
NsiI ATGCAT 1 cut(s) 2095
NspI RCATGY 2 cut(s) 1415, 1673
OliI CACNNNNGTG 1 cut(s) 1889
PciI ACATGT 2 cut(s) 1411, 1669
PcsI WCGNNNNNNNCGW 1 cut(s) 1810
PctI GAATGC 1 cut(s) 2015
PdmI GAANNNNTTC 2 cut(s) 1014, 1318
PfeI GAWTC 8 cut(s) 446, 1214, 1293, 1796, 2062, 2117, 2273, 2471
PfoI TCCNGGA 1 cut(s) 878
PkrI GCNGC 5 cut(s) 41, 114, 583, 1367, 1919
Ple19I CGATCG 1 cut(s) 1534
PleI GAGTC 2 cut(s) 1698, 2080
PpsI GAGTC 2 cut(s) 1698, 2080
Ppu21I YACGTR 1 cut(s) 2453
PpuMI RGGWCCY 1 cut(s) 1563
PscI ACATGT 2 cut(s) 1411, 1669
PsiI TTATAA 1 cut(s) 2280
Psp124BI GAGCTC 1 cut(s) 395
Psp1406I AACGTT 1 cut(s) 1813
Psp5II RGGWCCY 1 cut(s) 1563
Psp6I CCWGG 6 cut(s) 47, 248, 584, 878, 931, 1161
PspGI CCWGG 6 cut(s) 47, 248, 584, 878, 931, 1161
PspN4I GGNNCC 5 cut(s) 175, 1131, 1261, 1893, 2563
PspPI GGNCC 7 cut(s) 173, 260, 935, 1508, 1563, 1841, 2387
PspPPI RGGWCCY 1 cut(s) 1563
PstI CTGCAG 1 cut(s) 1943
PstNI CAGNNNCTG 2 cut(s) 680, 1793
PsuI RGATCY 7 cut(s) 439, 815, 1129, 1186, 2554, 2561, 2638
PvuI CGATCG 1 cut(s) 1534
PvuII CAGCTG 1 cut(s) 1949
RsaI GTAC 4 cut(s) 247, 809, 1807, 2189
RsaNI GTAC 4 cut(s) 246, 808, 1806, 2188
RseI CAYNNNNRTG 3 cut(s) 78, 1889, 1912
SacI GAGCTC 1 cut(s) 395
SaqAI TTAA 7 cut(s) 419, 926, 1355, 1406, 1710, 2396, 2598
SatI GCNGC 5 cut(s) 40, 113, 582, 1366, 1918
Sau96I GGNCC 7 cut(s) 173, 260, 935, 1508, 1563, 1841, 2387
SchI GAGTC 2 cut(s) 1699, 2081
ScrFI CCNGG 9 cut(s) 49, 250, 586, 880, 933, 1163, 2144, 2551, 2552
SduI GDGCHC 3 cut(s) 395, 654, 1639
SexAI ACCWGGT 2 cut(s) 931, 1161
SfaNI GCATC 5 cut(s) 79, 466, 1916, 2080, 2102
SfcI CTRYAG 3 cut(s) 545, 1369, 1939
SinI GGWCC 6 cut(s) 173, 260, 935, 1508, 1563, 2387
SmaI CCCGGG 1 cut(s) 2552
SmiMI CAYNNNNRTG 3 cut(s) 78, 1889, 1912
SmlI CTYRAG 5 cut(s) 241, 531, 645, 1019, 2069
SmoI CTYRAG 5 cut(s) 241, 531, 645, 1019, 2069
SsiI CCGC 1 cut(s) 1618
SspMI CTAG 7 cut(s) 1182, 1287, 1385, 1548, 1863, 1899, 2135
SstI GAGCTC 1 cut(s) 395
StyD4I CCNGG 9 cut(s) 47, 248, 584, 878, 931, 1161, 2142, 2549, 2550
StyI CCWWGG 3 cut(s) 512, 1054, 1677
TaaI ACNGT 7 cut(s) 736, 1745, 1767, 1849, 2380, 2516, 2571
TaiI ACGT 5 cut(s) 1342, 1804, 1816, 2231, 2455
TaqI TCGA 7 cut(s) 612, 1036, 1207, 1530, 1534, 2216, 2535
TatI WGTACW 1 cut(s) 807
TfiI GAWTC 8 cut(s) 446, 1214, 1293, 1796, 2062, 2117, 2273, 2471
Tru1I TTAA 7 cut(s) 419, 926, 1355, 1406, 1710, 2396, 2598
Tru9I TTAA 7 cut(s) 419, 926, 1355, 1406, 1710, 2396, 2598
TscAI CASTG 2 cut(s) 1240, 1927
TseFI GTSAC 3 cut(s) 768, 1148, 1177
TseI GCWGC 5 cut(s) 39, 112, 581, 1365, 1917
Tsp45I GTSAC 3 cut(s) 768, 1148, 1177
TspGWI ACGGA 1 cut(s) 2242
TspMI CCCGGG 1 cut(s) 2550
TspRI CASTG 2 cut(s) 1240, 1927
VpaK11BI GGWCC 6 cut(s) 173, 260, 935, 1508, 1563, 2387
XagI CCTNNNNNAGG 1 cut(s) 659
XapI RAATTY 8 cut(s) 421, 563, 874, 1198, 1239, 1268, 1779, 2408
XbaI TCTAGA 1 cut(s) 1862
XceI RCATGY 2 cut(s) 1415, 1673
XcmI CCANNNNNNNNNTGG 1 cut(s) 1628
XmaI CCCGGG 1 cut(s) 2550
XmiI GTMKAC 1 cut(s) 2518
XmnI GAANNNNTTC 2 cut(s) 1014, 1318
XspI CTAG 7 cut(s) 1182, 1287, 1385, 1548, 1863, 1899, 2135
Zsp2I ATGCAT 1 cut(s) 2095
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.