FvH4_1g11600

Lysosomal

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0004264
Physical Location & Seq
Reverse (-)
6338637 .. 6346336
7700 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g11600.t3

Sequence Viewer

Length: 3018 bp
ATGCTGAAGCTCGCGGTTTTTTTCGAGTGTGTGATTGGTTTGATCTGGTTTTTGGGAGTGGTGAGTGTTGATGGAGTTTATGTGAAGTACCAGACCGGGAGTGGTGTTGTGGAAGGGAAGCTGAATGTTCATTTGGTTGCGCATTCCCATGATGACGTTGGTTGGTTGAAGACTGTTGATCAGTACTATGTTGGATCAAATAACAGCATTCAGGGTGCTTGTGTTGAGAACACGTTGGATTCTGTTGTGGAATCGTTGGTTCGTGATCCGAATAGGAAGTTTGTGTTTGCTGAGATGGCATTTTTCCAAAGATGGTGGTTGACACAAAGTGTGGAGGTTCAAGAACGAGTGTGGAAACTAGTAGATGCTGGCCAGTTGGAGTTTGTAAATGGAGGTTGGTGCATGCATGATGAGGCAGCAGTCCATTATATAGATATGATTGATCAAACAACTCTAGGCCACCTTGCTATAAAGCAGCAGTTCAACAAGACACCTCGAGCCGGGTGGCAAATTGATCCTTTCGGACATTCTGCTGTGCAAGGTTACTTACTTGGAGCTGAGCTTGGATTCGATTCTGTACATTTTGCAAGGATTGATTATCAGGACAGAGCACAGCGAAAGGGAGATAAATCTCTTGAAGTTATATGGCATGGATCCAAAACTTTTGGTTCTTCATCTCAGATTTTTGCCAATGCCTTTCCTCGTCACTATAGTCCTCCAGAGGGTTTCCATTTTGAAGTTTTTGATGACTTTGTCCCTGTGCAGGATAATCCTCTTATTTTTGACTACAATGTTGAACAGCGCGTAAATGATTTTATTACTGCTGCAATTACCCAAGCAAATGTAACTCGAACAAATCACATGATGTGGACAATGGGAGATGATTTCCAATACCAATATGCTGAATCTTGGTTCAAACAAATGGACAAGTTAATTCATTATGTTAATAAGGATGGCCGAGTTAATGCCTTATATTCTACACCATCTCTCTACACCGATGCTAAAAATGCAGCAAATCAGTCATGGCCATTGAAAACTGAGGATTATTTTCCGTATGCAGATCAAATAAATGCTTATTGGACCGGTTATTTTACTAGTCGCCCAGGATTGAAACGATATATTCGATCACTGAGTGGATATTATTTGGCAGCAAGAGAACTAGAATTTCTGGTTGGAAAGAGAGCAAATGGTTCCAATACCTTTTCACTTGGAGATGCTTTAGGAATTGCACAGCACCATGATGCTGCCACTGGCACTGCTAAGCAACATACAACAAATGACTATGTAAAGCGCCTGTCAATTGGTGTCTCTGAGGCAGAAGCTGTTGTCAGTTCTGCTCTGTTGTGCCTAACTACAAATAAATCTGGAGATCAATGTAAAGACCCTGCAGTTACTTTTAGCCAGTGTCGATTACTAAATATCAGTTTCTGCCCTCCAACTGAGGAGGATATTCCAGCAGGGAAGAGCTTGGTTGTTGTGGCATATAATCCTCTTGGATGGAATCGCACTGAGATTGTTAGGATACCTGTTAATGATGCTAATCTTGTTGTTCAAGATTCCTCCGGAAACACCCTCGAGACACAATATGCAAGTGTGGATAATGTTACAAGCAATCTAAGAACTTTTTATACAGAAGCCTACTTGGGAAAGTCATCAAAAGAAATTCCCAAGTACTGGCTAATCTTTCAAGCCTCTGTGCCTCCTCTTGGTTGGGACACATACTTCATCTCAAGAGGAGCTACAGGGAAAAGAAGAGTTGGACTTCTCGCTGTGAAGGACAGTTCACAGAATGAGACCATTGACATTGGACCAGGAGATCTGAAGATGTCCTTTTCTTCTGCTTCTGGACAGCTCAAGCGGATGTATAACTCTAAAACAGGAGTTGATGTACCAATACAGCAGAGCTACCTCTGGTATGGTTCAAGCACCGCTGCGCAGGCTTCAGGTGCATATATATTTCGGCCTAATGGTGCCCCTCCAACTATTGTCTCAAGATCTGTACCTTTCAAGGTCTTTCGTGGACCATTATTCGATGAGATTCACCAAGAGTTCAGTTCATGGATCTATCAGGTCACTAGAGTTTACAGAGATAAAGAGCATGCTGAAGTTGAATATACTATTGGTCCAATTCCTACTGACGATGGTCTTGGTAAAGAGGTTATCACACGAATGACAGCAAACATGCAGACAAACAAGGTGTTTTATACCGATTCCAATGGGAGGGACTTCATTGAAAGGGTACGAGATTATAGGGCAGACTGGAACCTTTCAGTTAATCAACCTGTTGCCGGAAACTACTATCCACTAAACCTTGGGATCTTTACTTCTGATAACAAATCTGAGTTCTCAGTCTTGGTTGATCGTGCCACTGGAGGATCCAGCATTCAAGATGGACAAGTAGAGATGATGCTACATAGGCGTCTACTGGTCGATGATCGTAGAGGGGTGGGTGAAGCCCTTGATGAAACAGTTTGCATCAGCAATAATACATGTCAAGGACTAACGGTTCGAGGAAACTACTATATGAGCATAAACCAGTACGGGGATGGTGCTCAATGGCGTCGCACAACTGGACAAGAAGTTTACTCGCCACTTCTTCTAGCTTTCACGCATGAGAATATGGAGAACTGGAATGCATCTCATGTGACAAAAGGGTCTGTCATGGATTCAAGTTACAGCTTGCCCCACAATGTTGCTTTGATTACTCTTCAGGAGTTGGATGGTGGAAGTGCACTTCTTCGTCTAGCACATCTATATGAGGCTGGTGAAGCTCCTCAATATTCAACATTGGCCAAAGTTGAACTGAAGAAGATGCTAACAGGAAAAACGATAAAGGAGTTGAAAGAAATGAGCTTGTCAGCAAACCAAGAGAAGTCAGGGATGAAGAAGATGAAATGGCATGTCGAGGGTTCGACAGGAGAAGAACCTACACCAGTAAGAGGCGGCCCTGTCGATAGTTCAACTCTTGTTGTTGAGCTTGGACCCATGGAGATACGTACTTTCTTATTGAAATTCTAG

Protein Analysis

1006

Amino Acids

112.65

Weight (kDa)

5.83

Isoelectric Point (pI)

35.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_38N PF01074 2 - 255 6.3e-56 Glycosyl hydrolases family 38 N-terminal domain
Alpha-mann_mid PF09261 260 - 350 2e-17 Alpha mannosidase middle domain
Laman-like_dom PF21260 442 - 478 5.4e-08 Lysosomal alpha-mannosidase-like, central domain
Glyco_hydro_38C PF07748 507 - 716 2.2e-45 Glycosyl hydrolases family 38 C-terminal domain
Glyco_hydro38C2 PF17677 799 - 903 1.9e-07 Glycosyl hydrolases family 38 C-terminal beta sandwich domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2653
Acc16I TGCGCA 2 cut(s) 141, 1935
AccB1I GGYRCC 1 cut(s) 1970
AccB7I CCANNNNNTGG 1 cut(s) 1674
AccI GTMKAC 1 cut(s) 2422
AccII CGCG 2 cut(s) 14, 804
AccIII TCCGGA 1 cut(s) 1562
AciI CCGC 4 cut(s) 14, 1858, 1929, 2943
AclWI GGATC 9 cut(s) 202, 260, 509, 648, 661, 2069, 2324, 2370, 2383
AcoI YGGCCR 4 cut(s) 370, 955, 1025, 2790
AcsI RAATTY 3 cut(s) 1163, 1662, 3011
AcuI CTGAAG 6 cut(s) 26, 1841, 1926, 2124, 2693, 2825
AcyI GRCGYC 2 cut(s) 2419, 2560
AdeI CACNNNGTG 2 cut(s) 329, 1133
AfaI GTAC 9 cut(s) 89, 185, 579, 1673, 1890, 2001, 2241, 2540, 2998
AfiI CCNNNNNNNGG 9 cut(s) 500, 722, 763, 1674, 1706, 2220, 2288, 2542, 2939
AflIII ACRYGT 2 cut(s) 231, 2489
AgeI ACCGGT 1 cut(s) 1082
AhlI ACTAGT 2 cut(s) 358, 1094
AjnI CCWGG 2 cut(s) 1102, 1810
AjuI GAANNNNNNNTTGG 6 cut(s) 116, 148, 1155, 1187, 2103, 2135
AloI GAACNNNNNNTCC 2 cut(s) 2490, 2522
Alw21I GWGCWC 3 cut(s) 613, 2554, 2734
Alw26I GTCTC 4 cut(s) 1312, 1571, 1787, 1993
Alw44I GTGCAC 1 cut(s) 2730
AlwI GGATC 9 cut(s) 202, 260, 509, 648, 661, 2069, 2324, 2370, 2383
AlwNI CAGNNNCTG 2 cut(s) 1322, 1428
Ama87I CYCGRG 2 cut(s) 495, 1574
Aor13HI TCCGGA 1 cut(s) 1562
AoxI GGCC 7 cut(s) 370, 457, 955, 1025, 1961, 2790, 2944
ApaLI GTGCAC 1 cut(s) 2730
ApeKI GCWGC 7 cut(s) 416, 475, 824, 1010, 1148, 1244, 1931
ApoI RAATTY 3 cut(s) 1163, 1662, 3011
ArsI GACNNNNNNTTYG 2 cut(s) 2490, 2522
AsiGI ACCGGT 1 cut(s) 1082
AspLEI GCGC 4 cut(s) 142, 804, 1293, 1936
AspS9I GGNCC 6 cut(s) 1080, 1808, 2021, 2123, 2945, 2981
AsuC2I CCSGG 2 cut(s) 97, 502
AsuHPI GGTGA 4 cut(s) 73, 2033, 2462, 2777
AvaI CYCGRG 2 cut(s) 495, 1574
AvaII GGWCC 5 cut(s) 1080, 1808, 2021, 2123, 2981
BaeGI GKGCMC 2 cut(s) 1975, 2734
BalI TGGCCA 3 cut(s) 372, 1027, 2792
BamHI GGATCC 2 cut(s) 653, 2375
BanI GGYRCC 1 cut(s) 1970
BbsI GAAGAC 1 cut(s) 176
Bbv12I GWGCWC 3 cut(s) 613, 2554, 2734
BbvI GCAGC 7 cut(s) 428, 487, 811, 1022, 1160, 1231, 1918
BciT130I CCWGG 2 cut(s) 1104, 1812
BciVI GTATCC 1 cut(s) 1515
BclI TGATCA 2 cut(s) 178, 442
BcnI CCSGG 2 cut(s) 97, 502
BcoDI GTCTC 4 cut(s) 1312, 1571, 1787, 1993
BcuI ACTAGT 2 cut(s) 358, 1094
BfaI CTAG 8 cut(s) 359, 455, 1095, 1160, 2076, 2600, 2744, 3016
BfmI CTRYAG 3 cut(s) 709, 1386, 1740
BfoI RGCGCY 1 cut(s) 1294
BfuI GTATCC 1 cut(s) 1515
BglII AGATCT 2 cut(s) 1816, 1994
BisI GCNGC 8 cut(s) 417, 476, 825, 1011, 1149, 1245, 1932, 2944
BlpI GCTNAGC 2 cut(s) 558, 1260
BlsI GCNGC 8 cut(s) 418, 477, 826, 1012, 1150, 1246, 1933, 2945
BmcAI AGTACT 2 cut(s) 185, 1673
Bme1390I CCNGG 4 cut(s) 97, 502, 1104, 1812
Bme18I GGWCC 5 cut(s) 1080, 1808, 2021, 2123, 2981
BmeT110I CYCGRG 2 cut(s) 495, 1574
BmgT120I GGNCC 6 cut(s) 1080, 1808, 2021, 2123, 2945, 2981
BmiI GGNNCC 6 cut(s) 655, 1192, 1972, 2264, 2377, 2983
BmrFI CCNGG 4 cut(s) 97, 502, 1104, 1812
BmsI GCATC 9 cut(s) 355, 988, 1204, 1231, 1525, 2397, 2484, 2645, 2802
BoxI GACNNNNGTC 1 cut(s) 2142
BpiI GAAGAC 1 cut(s) 176
BpmI CTGGAG 3 cut(s) 702, 1386, 2391
Bpu1102I GCTNAGC 2 cut(s) 558, 1260
BpuEI CTTGAG 3 cut(s) 1714, 1838, 1975
BpuMI CCSGG 2 cut(s) 97, 502
BsaAI YACGTR 1 cut(s) 2996
BsaBI GATNNNNATC 1 cut(s) 1539
BsaHI GRCGYC 2 cut(s) 2419, 2560
BsaI GGTCTC 1 cut(s) 1787
BsaJI CCNNGG 3 cut(s) 1102, 2311, 2985
BsaWI WCCGGW 2 cut(s) 1082, 1562
BsaXI ACNNNNNCTCC 4 cut(s) 66, 96, 1872, 1902
Bsc4I CCNNNNNNNGG 9 cut(s) 500, 722, 763, 1674, 1706, 2220, 2288, 2542, 2939
Bse118I RCCGGY 1 cut(s) 1082
Bse8I GATNNNNATC 1 cut(s) 1539
BseAI TCCGGA 1 cut(s) 1562
BseBI CCWGG 2 cut(s) 1104, 1812
BseDI CCNNGG 3 cut(s) 1102, 2311, 2985
BseGI GGATG 6 cut(s) 958, 1502, 1866, 2551, 2725, 2886
BseJI GATNNNNATC 1 cut(s) 1539
BseLI CCNNNNNNNGG 9 cut(s) 500, 722, 763, 1674, 1706, 2220, 2288, 2542, 2939
BseRI GAGGAG 4 cut(s) 1457, 1692, 1749, 2763
BseSI GKGCMC 2 cut(s) 1975, 2734
BseXI GCAGC 7 cut(s) 428, 487, 811, 1022, 1160, 1231, 1918
BsgI GTGCAG 1 cut(s) 782
Bsh1236I CGCG 2 cut(s) 14, 804
BshFI GGCC 7 cut(s) 372, 459, 957, 1027, 1963, 2792, 2946
BshNI GGYRCC 1 cut(s) 1970
BshTI ACCGGT 1 cut(s) 1082
BsiHKAI GWGCWC 3 cut(s) 613, 2554, 2734
BsiHKCI CYCGRG 2 cut(s) 495, 1574
BsiSI CCGG 5 cut(s) 96, 501, 1083, 1563, 2289
BslFI GGGAC 3 cut(s) 740, 1727, 2237
BslI CCNNNNNNNGG 9 cut(s) 500, 722, 763, 1674, 1706, 2220, 2288, 2542, 2939
BsmAI GTCTC 4 cut(s) 1312, 1571, 1787, 1993
BsmFI GGGAC 3 cut(s) 740, 1727, 2237
BsmI GAATGC 4 cut(s) 142, 207, 2382, 2638
BsnI GGCC 7 cut(s) 372, 459, 957, 1027, 1963, 2792, 2946
Bso31I GGTCTC 1 cut(s) 1787
BsoBI CYCGRG 2 cut(s) 495, 1574
Bsp1286I GDGCHC 4 cut(s) 613, 1975, 2554, 2734
Bsp13I TCCGGA 1 cut(s) 1562
Bsp1407I TGTACA 1 cut(s) 577
Bsp1720I GCTNAGC 2 cut(s) 558, 1260
Bsp19I CCATGG 1 cut(s) 2985
BspACI CCGC 4 cut(s) 14, 1858, 1929, 2943
BspANI GGCC 7 cut(s) 372, 459, 957, 1027, 1963, 2792, 2946
BspEI TCCGGA 1 cut(s) 1562
BspFNI CGCG 2 cut(s) 14, 804
BspLI GGNNCC 6 cut(s) 655, 1192, 1972, 2264, 2377, 2983
BspMAI CTGCAG 1 cut(s) 1390
BspPI GGATC 9 cut(s) 202, 260, 509, 648, 661, 2069, 2324, 2370, 2383
BspQI GCTCTTC 1 cut(s) 1457
BspT107I GGYRCC 1 cut(s) 1970
BspTNI GGTCTC 1 cut(s) 1787
BsrFI RCCGGY 1 cut(s) 1082
BsrGI TGTACA 1 cut(s) 577
BssAI RCCGGY 1 cut(s) 1082
BssECI CCNNGG 3 cut(s) 1102, 2311, 2985
BssNI GRCGYC 2 cut(s) 2419, 2560
BssT1I CCWWGG 2 cut(s) 2311, 2985
Bst2UI CCWGG 2 cut(s) 1104, 1812
Bst4CI ACNGT 4 cut(s) 175, 1781, 2470, 2506
Bst6I CTCTTC 3 cut(s) 1457, 1747, 2712
BstACI GRCGYC 2 cut(s) 2419, 2560
BstAUI TGTACA 1 cut(s) 577
BstBAI YACGTR 1 cut(s) 2996
BstC8I GCNNGC 6 cut(s) 12, 370, 404, 1938, 2100, 2681
BstDSI CCRYGG 1 cut(s) 2985
BstF5I GGATG 6 cut(s) 958, 1502, 1866, 2551, 2725, 2886
BstFNI CGCG 2 cut(s) 14, 804
BstH2I RGCGCY 1 cut(s) 1294
BstHHI GCGC 4 cut(s) 142, 804, 1293, 1936
BstMAI GTCTC 4 cut(s) 1312, 1571, 1787, 1993
BstMWI GCNNNNNNNGC 6 cut(s) 296, 1007, 1937, 1946, 2416, 2768
BstNI CCWGG 2 cut(s) 1104, 1812
BstNSI RCATGY 5 cut(s) 406, 2102, 2185, 2493, 2903
BstPAI GACNNNNGTC 1 cut(s) 2142
BstSCI CCNGG 4 cut(s) 95, 500, 1102, 1810
BstSFI CTRYAG 3 cut(s) 709, 1386, 1740
BstSLI GKGCMC 2 cut(s) 1975, 2734
BstSNI TACGTA 1 cut(s) 2996
BstUI CGCG 2 cut(s) 14, 804
BstV1I GCAGC 7 cut(s) 428, 487, 811, 1022, 1160, 1231, 1918
BstV2I GAAGAC 1 cut(s) 176
BstX2I RGATCY 6 cut(s) 653, 1816, 1994, 2061, 2316, 2375
BstYI RGATCY 6 cut(s) 653, 1816, 1994, 2061, 2316, 2375
BsuI GTATCC 1 cut(s) 1515
BsuRI GGCC 7 cut(s) 372, 459, 957, 1027, 1963, 2792, 2946
BtgI CCRYGG 1 cut(s) 2985
BtsCI GGATG 6 cut(s) 958, 1502, 1866, 2551, 2725, 2886
BtsI GCAGTG 1 cut(s) 1254
BtsIMutI CAGTG 6 cut(s) 1127, 1248, 1254, 1409, 1506, 2367
Cac8I GCNNGC 6 cut(s) 12, 370, 404, 1938, 2100, 2681
CaiI CAGNNNCTG 2 cut(s) 1322, 1428
CfoI GCGC 4 cut(s) 142, 804, 1293, 1936
Cfr10I RCCGGY 1 cut(s) 1082
Cfr13I GGNCC 6 cut(s) 1080, 1808, 2021, 2123, 2945, 2981
CseI GACGC 2 cut(s) 2408, 2549
Csp6I GTAC 9 cut(s) 88, 184, 578, 1672, 1889, 2000, 2240, 2539, 2997
CspAI ACCGGT 1 cut(s) 1082
CspCI CAANNNNNGTGG 2 cut(s) 296, 331
CviQI GTAC 9 cut(s) 88, 184, 578, 1672, 1889, 2000, 2240, 2539, 2997
DraIII CACNNNGTG 2 cut(s) 329, 1133
DrdI GACNNNNNNGTC 1 cut(s) 2653
DseDI GACNNNNNNGTC 1 cut(s) 2653
EaeI YGGCCR 4 cut(s) 370, 955, 1025, 2790
Eam1104I CTCTTC 3 cut(s) 1457, 1747, 2712
EarI CTCTTC 3 cut(s) 1457, 1747, 2712
Eco105I TACGTA 1 cut(s) 2996
Eco130I CCWWGG 2 cut(s) 2311, 2985
Eco31I GGTCTC 1 cut(s) 1787
Eco47I GGWCC 5 cut(s) 1080, 1808, 2021, 2123, 2981
Eco57I CTGAAG 6 cut(s) 26, 1841, 1926, 2124, 2693, 2825
Eco88I CYCGRG 2 cut(s) 495, 1574
EcoRII CCWGG 2 cut(s) 1102, 1810
EcoT14I CCWWGG 2 cut(s) 2311, 2985
EcoT22I ATGCAT 2 cut(s) 408, 2638
ErhI CCWWGG 2 cut(s) 2311, 2985
FalI AAGNNNNNCTT 2 cut(s) 1814, 1846
FaqI GGGAC 3 cut(s) 740, 1727, 2237
FbaI TGATCA 2 cut(s) 178, 442
FblI GTMKAC 1 cut(s) 2422
Fnu4HI GCNGC 8 cut(s) 417, 476, 825, 1011, 1149, 1245, 1932, 2944
FokI GGATG 6 cut(s) 965, 1509, 1873, 2558, 2732, 2893
Fsp4HI GCNGC 8 cut(s) 417, 476, 825, 1011, 1149, 1245, 1932, 2944
FspBI CTAG 8 cut(s) 359, 455, 1095, 1160, 2076, 2600, 2744, 3016
FspI TGCGCA 2 cut(s) 141, 1935
GlaI GCGC 4 cut(s) 141, 803, 1292, 1935
GluI GCNGC 8 cut(s) 417, 476, 825, 1011, 1149, 1245, 1932, 2944
GsuI CTGGAG 3 cut(s) 702, 1386, 2391
HaeII RGCGCY 1 cut(s) 1294
HaeIII GGCC 7 cut(s) 372, 459, 957, 1027, 1963, 2792, 2946
HapII CCGG 5 cut(s) 96, 501, 1083, 1563, 2289
HgaI GACGC 2 cut(s) 2408, 2549
HhaI GCGC 4 cut(s) 142, 804, 1293, 1936
Hin1I GRCGYC 2 cut(s) 2419, 2560
Hin6I GCGC 4 cut(s) 140, 802, 1291, 1934
HinP1I GCGC 4 cut(s) 140, 802, 1291, 1934
HincII GTYRAC 1 cut(s) 321
HindII GTYRAC 1 cut(s) 321
HpaII CCGG 5 cut(s) 96, 501, 1083, 1563, 2289
HphI GGTGA 4 cut(s) 73, 2033, 2462, 2777
Hpy166II GTNNAC 8 cut(s) 321, 870, 1784, 2021, 2083, 2423, 2584, 2732
Hpy188I TCNGA 7 cut(s) 270, 524, 681, 1312, 1821, 2329, 2341
Hpy8I GTNNAC 8 cut(s) 321, 870, 1784, 2021, 2083, 2423, 2584, 2732
Hpy99I CGWCG 1 cut(s) 2565
HpyAV CCTTC 2 cut(s) 107, 1768
HpyCH4III ACNGT 4 cut(s) 175, 1781, 2470, 2506
HpyCH4IV ACGT 3 cut(s) 156, 233, 2995
HpyF10VI GCNNNNNNNGC 6 cut(s) 296, 1007, 1937, 1946, 2416, 2768
HpySE526I ACGT 3 cut(s) 156, 233, 2995
Hsp92I GRCGYC 2 cut(s) 2419, 2560
HspAI GCGC 4 cut(s) 140, 802, 1291, 1934
Kpn2I TCCGGA 1 cut(s) 1562
Ksp22I TGATCA 2 cut(s) 178, 442
LguI GCTCTTC 1 cut(s) 1457
LmnI GCTCC 3 cut(s) 554, 1736, 2776
Lsp1109I GCAGC 7 cut(s) 428, 487, 811, 1022, 1160, 1231, 1918
LweI GCATC 9 cut(s) 355, 988, 1204, 1231, 1525, 2397, 2484, 2645, 2802
MaeI CTAG 8 cut(s) 359, 455, 1095, 1160, 2076, 2600, 2744, 3016
MaeII ACGT 3 cut(s) 156, 233, 2995
MaeIII GTNAC 8 cut(s) 542, 704, 844, 1390, 1603, 2071, 2644, 2672
MfeI CAATTG 1 cut(s) 1299
MflI RGATCY 6 cut(s) 653, 1816, 1994, 2061, 2316, 2375
MhlI GDGCHC 4 cut(s) 613, 1975, 2554, 2734
MlsI TGGCCA 3 cut(s) 372, 1027, 2792
MluCI AATT 9 cut(s) 510, 828, 933, 1163, 1224, 1299, 1662, 2127, 3011
MluNI TGGCCA 3 cut(s) 372, 1027, 2792
MmeI TCCRAC 8 cut(s) 172, 216, 357, 1153, 1460, 1738, 2003, 2697
Mox20I TGGCCA 3 cut(s) 372, 1027, 2792
Mph1103I ATGCAT 2 cut(s) 408, 2638
MroI TCCGGA 1 cut(s) 1562
MscI TGGCCA 3 cut(s) 372, 1027, 2792
MseI TTAA 5 cut(s) 932, 945, 963, 1530, 2274
MslI CAYNNNNRTG 4 cut(s) 147, 1239, 2168, 2754
Msp20I TGGCCA 3 cut(s) 372, 1027, 2792
MspA1I CMGCKG 1 cut(s) 1931
MspI CCGG 5 cut(s) 96, 501, 1083, 1563, 2289
MspR9I CCNGG 4 cut(s) 97, 502, 1104, 1812
MunI CAATTG 1 cut(s) 1299
Mva1269I GAATGC 4 cut(s) 142, 207, 2382, 2638
MvaI CCWGG 2 cut(s) 1104, 1812
MvnI CGCG 2 cut(s) 14, 804
MwoI GCNNNNNNNGC 6 cut(s) 296, 1007, 1937, 1946, 2416, 2768
NciI CCSGG 2 cut(s) 97, 502
NcoI CCATGG 1 cut(s) 2985
NlaIV GGNNCC 6 cut(s) 655, 1192, 1972, 2264, 2377, 2983
NmeAIII GCCGAG 1 cut(s) 983
NmuCI GTSAC 3 cut(s) 704, 2071, 2644
NsbI TGCGCA 2 cut(s) 141, 1935
NsiI ATGCAT 2 cut(s) 408, 2638
NspI RCATGY 5 cut(s) 406, 2102, 2185, 2493, 2903
PaeI GCATGC 2 cut(s) 406, 2102
PaeR7I CTCGAG 2 cut(s) 495, 1574
PciI ACATGT 1 cut(s) 2489
PciSI GCTCTTC 1 cut(s) 1457
PcsI WCGNNNNNNNCGW 1 cut(s) 1120
PctI GAATGC 4 cut(s) 142, 207, 2382, 2638
PflFI GACNNNGTC 1 cut(s) 752
PflMI CCANNNNNTGG 1 cut(s) 1674
PinAI ACCGGT 1 cut(s) 1082
PkrI GCNGC 8 cut(s) 418, 477, 826, 1012, 1150, 1246, 1933, 2945
Ppu21I YACGTR 1 cut(s) 2996
PscI ACATGT 1 cut(s) 2489
PshAI GACNNNNGTC 1 cut(s) 2142
Psp6I CCWGG 2 cut(s) 1102, 1810
PspGI CCWGG 2 cut(s) 1102, 1810
PspN4I GGNNCC 6 cut(s) 655, 1192, 1972, 2264, 2377, 2983
PspPI GGNCC 6 cut(s) 1080, 1808, 2021, 2123, 2945, 2981
PspXI VCTCGAGB 1 cut(s) 495
PsrI GAACNNNNNNTAC 2 cut(s) 1612, 1644
PstI CTGCAG 1 cut(s) 1390
PstNI CAGNNNCTG 2 cut(s) 1322, 1428
PsuI RGATCY 6 cut(s) 653, 1816, 1994, 2061, 2316, 2375
PsyI GACNNNGTC 1 cut(s) 752
RsaI GTAC 9 cut(s) 89, 185, 579, 1673, 1890, 2001, 2241, 2540, 2998
RsaNI GTAC 9 cut(s) 88, 184, 578, 1672, 1889, 2000, 2240, 2539, 2997
RseI CAYNNNNRTG 4 cut(s) 147, 1239, 2168, 2754
SapI GCTCTTC 1 cut(s) 1457
SaqAI TTAA 5 cut(s) 932, 945, 963, 1530, 2274
SatI GCNGC 8 cut(s) 417, 476, 825, 1011, 1149, 1245, 1932, 2944
Sau96I GGNCC 6 cut(s) 1080, 1808, 2021, 2123, 2945, 2981
ScaI AGTACT 2 cut(s) 185, 1673
ScrFI CCNGG 4 cut(s) 97, 502, 1104, 1812
SduI GDGCHC 4 cut(s) 613, 1975, 2554, 2734
SfaNI GCATC 9 cut(s) 355, 988, 1204, 1231, 1525, 2397, 2484, 2645, 2802
SfcI CTRYAG 3 cut(s) 709, 1386, 1740
Sfr274I CTCGAG 2 cut(s) 495, 1574
SinI GGWCC 5 cut(s) 1080, 1808, 2021, 2123, 2981
SlaI CTCGAG 2 cut(s) 495, 1574
SmiMI CAYNNNNRTG 4 cut(s) 147, 1239, 2168, 2754
SmlI CTYRAG 5 cut(s) 495, 1574, 1729, 1853, 1990
SmoI CTYRAG 5 cut(s) 495, 1574, 1729, 1853, 1990
SnaBI TACGTA 1 cut(s) 2996
SpeI ACTAGT 2 cut(s) 358, 1094
SphI GCATGC 2 cut(s) 406, 2102
Sse9I AATT 9 cut(s) 510, 828, 933, 1163, 1224, 1299, 1662, 2127, 3011
SsiI CCGC 4 cut(s) 14, 1858, 1929, 2943
SspI AATATT 1 cut(s) 2780
SspMI CTAG 8 cut(s) 359, 455, 1095, 1160, 2076, 2600, 2744, 3016
StyD4I CCNGG 4 cut(s) 95, 500, 1102, 1810
StyI CCWWGG 2 cut(s) 2311, 2985
TaaI ACNGT 4 cut(s) 175, 1781, 2470, 2506
TaiI ACGT 3 cut(s) 159, 236, 2998
TasI AATT 9 cut(s) 510, 828, 933, 1163, 1224, 1299, 1662, 2127, 3011
TatI WGTACW 3 cut(s) 183, 577, 1671
TauI GCSGC 1 cut(s) 2946
Tru1I TTAA 5 cut(s) 932, 945, 963, 1530, 2274
Tru9I TTAA 5 cut(s) 932, 945, 963, 1530, 2274
TscAI CASTG 6 cut(s) 1134, 1255, 1261, 1409, 1513, 2374
TseFI GTSAC 3 cut(s) 704, 2071, 2644
TseI GCWGC 7 cut(s) 416, 475, 824, 1010, 1148, 1244, 1931
Tsp45I GTSAC 3 cut(s) 704, 2071, 2644
TspDTI ATGAA 9 cut(s) 119, 663, 926, 1714, 2046, 2218, 2478, 2897, 2906
TspGWI ACGGA 1 cut(s) 1041
TspRI CASTG 6 cut(s) 1134, 1255, 1261, 1409, 1513, 2374
Tth111I GACNNNGTC 1 cut(s) 752
Van91I CCANNNNNTGG 1 cut(s) 1674
VneI GTGCAC 1 cut(s) 2730
VpaK11BI GGWCC 5 cut(s) 1080, 1808, 2021, 2123, 2981
XapI RAATTY 3 cut(s) 1163, 1662, 3011
XceI RCATGY 5 cut(s) 406, 2102, 2185, 2493, 2903
XcmI CCANNNNNNNNNTGG 3 cut(s) 98, 155, 2543
XhoI CTCGAG 2 cut(s) 495, 1574
XmiI GTMKAC 1 cut(s) 2422
XspI CTAG 8 cut(s) 359, 455, 1095, 1160, 2076, 2600, 2744, 3016
ZrmI AGTACT 2 cut(s) 185, 1673
Zsp2I ATGCAT 2 cut(s) 408, 2638
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.