Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0004264

Physical Location & Seq

Genomic Coordinates Forward (+)

81311768 .. 81326804

Gene Structure 15037 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00143340.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1731 bp

ATGCTAAAGCTTGCGGCGTTTTTCGAGCTTGTGATTGTGGTTGTTTGGTTGGGAGTGGCGAGTGTTGATGGAGTTTTTGTGAAGTACCAGACCGGGAGTGGTGTTGTGGAAGGGAAGTTGAATGTTCATTTGGTTGCGCATTCCCATGATGACGTTGGTTGGTTGAAGACTGTTGATCAGTACTATGTTGGATCAAATAACAGCATTCAGGGTGCTTGTGTTGAGAATACGTTGGATTCTGTCGTTGAATCGTTGGTTCGTGATCCGAATAGGAAGTTTGTGTTTGCTGAGATGGCATTTTTCCAAAGATGGTGGTTAACACAGAGTGTGGAAGTTCAAGAACGAGTGCGGAAACTAGTAGATGCTGGCCAGTTAGAGTTTGTAAATGGAGGTTGGTGCATGCATGATGAGGCTGCAGTCCATTACATAGACATGATTGACCAAACAACTCTAGGCCACCTTGCTATAAAGCAGCAGTTCAACAAGACACCTCGAGCGGGGTGGCAAATTGATCCTTTCGGACACTCTGCTGTGCAGGGTTACCTACTTGGAGCTGAGCTTGGATTCGATTCTGTACATTTTGCAAGGATTGATTATCAGGACAGAGCACAGCGTAAGGGAGATAAGTCTCTTGAAGTTATATGGCGTGGATCCAAAACTTTTGGTTCTTCATCTCAGATTTTTGCCAATGCCTTTCCTCGTCACTATAGTCCGCCAGATGGTTTCCATTTTGAAGTTTTTGATGACTTTGTCCCTGTGCAGGATAATCCTCTTATTTTTGACTACAATGTTGAACTGCGCGTTAATGATTTTATTACTGCTGCAATTACCCAAGCAAATGTGACCAGGGGAAATCACATGATGTGGACAATGGGAGATGATTTCCAGTACCAATATGCTGAATCGTGGTTCAAACAAATGGATAAGTTAATTCACTATGTTAATAAGGATGGCCGAGTTAATGCCTTATATTCTACACCGTCTCTCTACACTGATGCTAAAAATGCAGCAAATCAATCATGGCCATTAAAAACTGAGGATTATTTTCCGTATGCAGATATAATAAATGCTTATTGGACCGGTTATTTTACTAGTCGCCCAGGTTTGAAAAGATATATTCGATCACTGAGCGGATATTATTTGGCAGCAAGAGAACTAGAATTTCTGGTTGGAAAGAGAGCAAATGGTTCAAGTACCTATTCCCTTGGAGATGCTTTAGGAATTGCACAGCACCACGATGCTGCCACTGGCACTGCTAAACAACATACAACAAATGACTATGTAAAGCGCCTGTCAATTGGTGTCACTGAGGCAGAAGCTGTTGTCAGTTCTGCTCTGTCGTGCCTAACTACAAATAAATCTGGAGATCAATGTAAAGACCCTGCAGTTACTTTTAGCCAGTGTCGACTACTCAATATCAGTTTCTGCCCTCCAACGGAGGAAGATATTCCAGAAGGGAAGAGCTTGGTTGTTGTGGCATATAATCCTCTTGGATGGAATCGCACTGAGATTGTTAGGATACCTGTTAATTATGATAATCTTGTTGTTCAAGATTCCTCCGGAAACATCCTCGAGATACAATATGTGAGTGTGGATAATGTTACAAGCAATCTAAGAACATTTTATACAGAAGCCTACTTGGGACAGTCATCAAAACAAATTCCCAAGTACTGGCTAATCTTTTCAAGCCTCTGTGCCACCACTTGGTTGGGACACATACTTCATCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0003674 GO:0003824 GO:0004553 GO:0004559 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005975 GO:0005996 GO:0006013 GO:0006464 GO:0006517 GO:0006807 GO:0008150 GO:0008152 GO:0009100 GO:0009987 GO:0015923 GO:0016787 GO:0016798 GO:0019318 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:1901135 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00511 map00511

Pfam Domains

Protein Families

Alpha-mann_mid Glyco_hydro_38 Glyco_hydro_38C

Protein Analysis

576

Amino Acids

64.92

Weight (kDa)

5.72

Isoelectric Point (pI)

36.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_38N	PF01074	41 - 352	2.9e-78	Glycosyl hydrolases family 38 N-terminal domain
Alpha-mann_mid	PF09261	357 - 449	2.3e-18	Alpha mannosidase middle domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004264)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66150 AT5G66150 AT5G66150
fragaria_vesca	FvH4_1g11550 FvH4_1g11600 FvH4_1g11600 FvH4_1g11600
malus_domestica	MD02G1128700.v1.1 MD02G1129000.v1.1
prunus_persica	Prupe.7G170500_v2.0.a1 Prupe.7G170500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0099191 RchiOBHm_Chr2g0099201
rosa_laevigata	RLG00000016854 RLG00000016860
rosa_multiflora	Rmu_co8341649.1_g000001 Rmu_sc0002025.1_g000008 Rmu_sc0010993.1_g000001
rosa_roxburghii	Rroxscaffold_2G00143340 Rroxscaffold_2G00143370
rosa_rugosa	Rorug02G0077600 Rorug02G0078100 Rorug02G0078100
rosa_samantha	Rh2AG126500 Rh2AG126900 Rh2BG129700 Rh2BG129900 Rh2CG130700 Rh2CG131100 Rh2DG131100 Rh2DG131500
rosa_wichuraiana	Rw2G009780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	138
AccB7I	CCANNNNNTGG	2 cut(s)	1671, 1704
AccBSI	CCGCTC	2 cut(s)	497, 1131
AccI	GTMKAC	1 cut(s)	1405
AccII	CGCG	1 cut(s)	801
AccIII	TCCGGA	1 cut(s)	1559
AciI	CCGC	5 cut(s)	14, 349, 497, 713, 1131
AclWI	GGATC	5 cut(s)	199, 257, 506, 645, 658
AcoI	YGGCCR	3 cut(s)	367, 952, 1022
AcsI	RAATTY	2 cut(s)	1160, 1659
AdeI	CACNNNGTG	1 cut(s)	326
AfaI	GTAC	6 cut(s)	86, 182, 576, 890, 1195, 1670
AfiI	CCNNNNNNNGG	6 cut(s)	497, 719, 760, 1435, 1671, 1704
AgeI	ACCGGT	1 cut(s)	1079
AhlI	ACTAGT	2 cut(s)	355, 1091
AjnI	CCWGG	2 cut(s)	845, 1099
AjuI	GAANNNNNNNTTGG	4 cut(s)	113, 145, 1152, 1184
AluBI	AGCT	6 cut(s)	10, 28, 554, 559, 1319, 1464
AluI	AGCT	6 cut(s)	10, 28, 554, 559, 1319, 1464
Alw21I	GWGCWC	1 cut(s)	610
Alw26I	GTCTC	2 cut(s)	633, 987
AlwI	GGATC	5 cut(s)	199, 257, 506, 645, 658
AlwNI	CAGNNNCTG	2 cut(s)	1319, 1425
Ama87I	CYCGRG	2 cut(s)	492, 1571
Aor13HI	TCCGGA	1 cut(s)	1559
AoxI	GGCC	4 cut(s)	367, 454, 952, 1022
ApeKI	GCWGC	6 cut(s)	413, 472, 821, 1007, 1145, 1241
ApoI	RAATTY	2 cut(s)	1160, 1659
AsiGI	ACCGGT	1 cut(s)	1079
Asp700I	GAANNNNTTC	1 cut(s)	1446
AspLEI	GCGC	3 cut(s)	139, 801, 1290
AspS9I	GGNCC	1 cut(s)	1077
AsuC2I	CCSGG	1 cut(s)	94
AvaI	CYCGRG	2 cut(s)	492, 1571
AvaII	GGWCC	1 cut(s)	1077
BalI	TGGCCA	2 cut(s)	369, 1024
BamHI	GGATCC	1 cut(s)	650
BbsI	GAAGAC	1 cut(s)	173
Bbv12I	GWGCWC	1 cut(s)	610
BbvI	GCAGC	6 cut(s)	400, 484, 808, 1019, 1157, 1228
BccI	CCATC	6 cut(s)	62, 286, 303, 713, 944, 1488
BciT130I	CCWGG	2 cut(s)	847, 1101
BciVI	GTATCC	1 cut(s)	1512
BclI	TGATCA	1 cut(s)	175
BcnI	CCSGG	1 cut(s)	94
BcoDI	GTCTC	2 cut(s)	633, 987
BcuI	ACTAGT	2 cut(s)	355, 1091
BfaI	CTAG	5 cut(s)	356, 452, 1092, 1157, 1729
BfmI	CTRYAG	3 cut(s)	414, 706, 1383
BfoI	RGCGCY	1 cut(s)	1291
BfuI	GTATCC	1 cut(s)	1512
BisI	GCNGC	7 cut(s)	15, 414, 473, 822, 1008, 1146, 1242
BlpI	GCTNAGC	1 cut(s)	555
BlsI	GCNGC	7 cut(s)	16, 415, 474, 823, 1009, 1147, 1243
BmcAI	AGTACT	2 cut(s)	182, 1670
Bme1390I	CCNGG	3 cut(s)	94, 847, 1101
Bme18I	GGWCC	1 cut(s)	1077
BmeT110I	CYCGRG	2 cut(s)	492, 1571
BmgT120I	GGNCC	1 cut(s)	1077
BmiI	GGNNCC	1 cut(s)	652
BmrFI	CCNGG	3 cut(s)	94, 847, 1101
BmsI	GCATC	4 cut(s)	352, 985, 1201, 1228
BpiI	GAAGAC	1 cut(s)	173
BpmI	CTGGAG	1 cut(s)	1383
Bpu1102I	GCTNAGC	1 cut(s)	555
BpuMI	CCSGG	1 cut(s)	94
BsaJI	CCNNGG	3 cut(s)	846, 1099, 1204
BsaWI	WCCGGW	2 cut(s)	1079, 1559
BsaXI	ACNNNNNCTCC	2 cut(s)	63, 93
Bsc4I	CCNNNNNNNGG	6 cut(s)	497, 719, 760, 1435, 1671, 1704
Bse118I	RCCGGY	1 cut(s)	1079
Bse1I	ACTGG	5 cut(s)	370, 886, 1252, 1399, 1676
BseAI	TCCGGA	1 cut(s)	1559
BseBI	CCWGG	2 cut(s)	847, 1101
BseDI	CCNNGG	3 cut(s)	846, 1099, 1204
BseGI	GGATG	3 cut(s)	955, 1499, 1566
BseLI	CCNNNNNNNGG	6 cut(s)	497, 719, 760, 1435, 1671, 1704
BseMII	CTCAG	7 cut(s)	279, 546, 689, 1026, 1118, 1299, 1497
BseNI	ACTGG	5 cut(s)	370, 886, 1252, 1399, 1676
BseXI	GCAGC	6 cut(s)	400, 484, 808, 1019, 1157, 1228
BsgI	GTGCAG	2 cut(s)	554, 779
Bsh1236I	CGCG	1 cut(s)	801
BshFI	GGCC	4 cut(s)	369, 456, 954, 1024
BshTI	ACCGGT	1 cut(s)	1079
BsiHKAI	GWGCWC	1 cut(s)	610
BsiHKCI	CYCGRG	2 cut(s)	492, 1571
BsiSI	CCGG	3 cut(s)	93, 1080, 1560
BslFI	GGGAC	3 cut(s)	737, 1656, 1725
BslI	CCNNNNNNNGG	6 cut(s)	497, 719, 760, 1435, 1671, 1704
BsmAI	GTCTC	2 cut(s)	633, 987
BsmBI	CGTCTC	1 cut(s)	987
BsmFI	GGGAC	3 cut(s)	737, 1656, 1725
BsmI	GAATGC	2 cut(s)	139, 204
BsnI	GGCC	4 cut(s)	369, 456, 954, 1024
BsoBI	CYCGRG	2 cut(s)	492, 1571
Bsp1286I	GDGCHC	1 cut(s)	610
Bsp13I	TCCGGA	1 cut(s)	1559
Bsp1407I	TGTACA	1 cut(s)	574
Bsp143I	GATC	7 cut(s)	175, 191, 262, 511, 650, 1121, 1366
Bsp1720I	GCTNAGC	1 cut(s)	555
BspACI	CCGC	5 cut(s)	14, 349, 497, 713, 1131
BspANI	GGCC	4 cut(s)	369, 456, 954, 1024
BspCNI	CTCAG	7 cut(s)	280, 547, 688, 1027, 1119, 1300, 1498
BspEI	TCCGGA	1 cut(s)	1559
BspFNI	CGCG	1 cut(s)	801
BspLI	GGNNCC	1 cut(s)	652
BspMAI	CTGCAG	2 cut(s)	418, 1387
BspPI	GGATC	5 cut(s)	199, 257, 506, 645, 658
BspQI	GCTCTTC	1 cut(s)	1454
BsrBI	CCGCTC	2 cut(s)	497, 1131
BsrFI	RCCGGY	1 cut(s)	1079
BsrGI	TGTACA	1 cut(s)	574
BsrI	ACTGG	5 cut(s)	370, 886, 1252, 1399, 1676
BssAI	RCCGGY	1 cut(s)	1079
BssECI	CCNNGG	3 cut(s)	846, 1099, 1204
BssMI	GATC	7 cut(s)	175, 191, 262, 511, 650, 1121, 1366
BssT1I	CCWWGG	1 cut(s)	1204
Bst2UI	CCWGG	2 cut(s)	847, 1101
Bst4CI	ACNGT	3 cut(s)	172, 981, 1647
Bst6I	CTCTTC	1 cut(s)	1454
BstAUI	TGTACA	1 cut(s)	574
BstC8I	GCNNGC	3 cut(s)	12, 367, 401
BstDEI	CTNAG	8 cut(s)	288, 555, 675, 1035, 1127, 1308, 1506, 1613
BstEII	GGTNACC	1 cut(s)	539
BstF5I	GGATG	3 cut(s)	955, 1499, 1566
BstFNI	CGCG	1 cut(s)	801
BstH2I	RGCGCY	1 cut(s)	1291
BstHHI	GCGC	3 cut(s)	139, 801, 1290
BstKTI	GATC	7 cut(s)	178, 194, 265, 514, 653, 1124, 1369
BstMAI	GTCTC	2 cut(s)	633, 987
BstMBI	GATC	7 cut(s)	175, 191, 262, 511, 650, 1121, 1366
BstMWI	GCNNNNNNNGC	2 cut(s)	293, 1004
BstNI	CCWGG	2 cut(s)	847, 1101
BstNSI	RCATGY	1 cut(s)	403
BstPI	GGTNACC	1 cut(s)	539
BstSCI	CCNGG	3 cut(s)	92, 845, 1099
BstSFI	CTRYAG	3 cut(s)	414, 706, 1383
BstUI	CGCG	1 cut(s)	801
BstV1I	GCAGC	6 cut(s)	400, 484, 808, 1019, 1157, 1228
BstV2I	GAAGAC	1 cut(s)	173
BstX2I	RGATCY	1 cut(s)	650
BstXI	CCANNNNNNTGG	1 cut(s)	1708
BstYI	RGATCY	1 cut(s)	650
BsuI	GTATCC	1 cut(s)	1512
BsuRI	GGCC	4 cut(s)	369, 456, 954, 1024
BtsCI	GGATG	3 cut(s)	955, 1499, 1566
BtsI	GCAGTG	1 cut(s)	1251
BtsIMutI	CAGTG	7 cut(s)	990, 1124, 1245, 1251, 1305, 1406, 1503
Cac8I	GCNNGC	3 cut(s)	12, 367, 401
CaiI	CAGNNNCTG	2 cut(s)	1319, 1425
CfoI	GCGC	3 cut(s)	139, 801, 1290
Cfr10I	RCCGGY	1 cut(s)	1079
Cfr13I	GGNCC	1 cut(s)	1077
Csp6I	GTAC	6 cut(s)	85, 181, 575, 889, 1194, 1669
CspAI	ACCGGT	1 cut(s)	1079
CspCI	CAANNNNNGTGG	2 cut(s)	293, 328
CviAII	CATG	6 cut(s)	146, 400, 404, 433, 859, 1020
CviQI	GTAC	6 cut(s)	85, 181, 575, 889, 1194, 1669
DdeI	CTNAG	8 cut(s)	288, 555, 675, 1035, 1127, 1308, 1506, 1613
DpnI	GATC	7 cut(s)	177, 193, 264, 513, 652, 1123, 1368
DpnII	GATC	7 cut(s)	175, 191, 262, 511, 650, 1121, 1366
DraIII	CACNNNGTG	1 cut(s)	326
EaeI	YGGCCR	3 cut(s)	367, 952, 1022
Eam1104I	CTCTTC	1 cut(s)	1454
EarI	CTCTTC	1 cut(s)	1454
EciI	GGCGGA	1 cut(s)	702
Eco130I	CCWWGG	1 cut(s)	1204
Eco47I	GGWCC	1 cut(s)	1077
Eco88I	CYCGRG	2 cut(s)	492, 1571
Eco91I	GGTNACC	1 cut(s)	539
EcoO65I	GGTNACC	1 cut(s)	539
EcoRII	CCWGG	2 cut(s)	845, 1099
EcoT14I	CCWWGG	1 cut(s)	1204
EcoT22I	ATGCAT	1 cut(s)	405
ErhI	CCWWGG	1 cut(s)	1204
Esp3I	CGTCTC	1 cut(s)	987
FaeI	CATG	6 cut(s)	149, 403, 407, 436, 862, 1023
FaqI	GGGAC	3 cut(s)	737, 1656, 1725
FatI	CATG	6 cut(s)	145, 399, 403, 432, 858, 1019
FauI	CCCGC	1 cut(s)	490
FbaI	TGATCA	1 cut(s)	175
FblI	GTMKAC	1 cut(s)	1405
Fnu4HI	GCNGC	7 cut(s)	15, 414, 473, 822, 1008, 1146, 1242
FokI	GGATG	3 cut(s)	962, 1506, 1553
Fsp4HI	GCNGC	7 cut(s)	15, 414, 473, 822, 1008, 1146, 1242
FspBI	CTAG	5 cut(s)	356, 452, 1092, 1157, 1729
FspI	TGCGCA	1 cut(s)	138
GlaI	GCGC	3 cut(s)	138, 800, 1289
GluI	GCNGC	7 cut(s)	15, 414, 473, 822, 1008, 1146, 1242
GsuI	CTGGAG	1 cut(s)	1383
HaeII	RGCGCY	1 cut(s)	1291
HaeIII	GGCC	4 cut(s)	369, 456, 954, 1024
HapII	CCGG	3 cut(s)	93, 1080, 1560
HhaI	GCGC	3 cut(s)	139, 801, 1290
Hin1II	CATG	6 cut(s)	149, 403, 407, 436, 862, 1023
Hin6I	GCGC	3 cut(s)	137, 799, 1288
HinP1I	GCGC	3 cut(s)	137, 799, 1288
HincII	GTYRAC	2 cut(s)	318, 1406
HindII	GTYRAC	2 cut(s)	318, 1406
HindIII	AAGCTT	1 cut(s)	8
HinfI	GANTC	7 cut(s)	236, 248, 564, 569, 902, 1498, 1553
HpaI	GTTAAC	1 cut(s)	318
HpaII	CCGG	3 cut(s)	93, 1080, 1560
Hpy166II	GTNNAC	3 cut(s)	318, 867, 1406
Hpy188I	TCNGA	3 cut(s)	267, 521, 678
Hpy188III	TCNNGA	9 cut(s)	260, 338, 599, 632, 1362, 1451, 1550, 1560, 1573
Hpy8I	GTNNAC	3 cut(s)	318, 867, 1406
HpyAV	CCTTC	2 cut(s)	104, 1448
HpyCH4III	ACNGT	3 cut(s)	172, 981, 1647
HpyCH4IV	ACGT	2 cut(s)	153, 230
HpyF10VI	GCNNNNNNNGC	2 cut(s)	293, 1004
HpyF3I	CTNAG	8 cut(s)	288, 555, 675, 1035, 1127, 1308, 1506, 1613
HpySE526I	ACGT	2 cut(s)	153, 230
Hsp92II	CATG	6 cut(s)	149, 403, 407, 436, 862, 1023
HspAI	GCGC	3 cut(s)	137, 799, 1288
Kpn2I	TCCGGA	1 cut(s)	1559
Ksp22I	TGATCA	1 cut(s)	175
KspAI	GTTAAC	1 cut(s)	318
Kzo9I	GATC	7 cut(s)	175, 191, 262, 511, 650, 1121, 1366
LguI	GCTCTTC	1 cut(s)	1454
LmnI	GCTCC	1 cut(s)	551
Lsp1109I	GCAGC	6 cut(s)	400, 484, 808, 1019, 1157, 1228
LweI	GCATC	4 cut(s)	352, 985, 1201, 1228
MaeI	CTAG	5 cut(s)	356, 452, 1092, 1157, 1729
MaeII	ACGT	2 cut(s)	153, 230
MaeIII	GTNAC	6 cut(s)	539, 701, 841, 1303, 1387, 1600
MalI	GATC	7 cut(s)	177, 193, 264, 513, 652, 1123, 1368
MbiI	CCGCTC	2 cut(s)	497, 1131
MboI	GATC	7 cut(s)	175, 191, 262, 511, 650, 1121, 1366
MboII	GAAGA	4 cut(s)	178, 660, 1454, 1471
MfeI	CAATTG	1 cut(s)	1296
MflI	RGATCY	1 cut(s)	650
MhlI	GDGCHC	1 cut(s)	610
MlsI	TGGCCA	2 cut(s)	369, 1024
MluCI	AATT	8 cut(s)	507, 825, 930, 1160, 1221, 1296, 1528, 1659
MluNI	TGGCCA	2 cut(s)	369, 1024
MmeI	TCCRAC	4 cut(s)	169, 213, 1150, 1457
Mox20I	TGGCCA	2 cut(s)	369, 1024
Mph1103I	ATGCAT	1 cut(s)	405
MroI	TCCGGA	1 cut(s)	1559
MroXI	GAANNNNTTC	1 cut(s)	1446
MscI	TGGCCA	2 cut(s)	369, 1024
MseI	TTAA	7 cut(s)	317, 804, 929, 942, 960, 1028, 1527
MslI	CAYNNNNRTG	3 cut(s)	144, 431, 1236
Msp20I	TGGCCA	2 cut(s)	369, 1024
MspI	CCGG	3 cut(s)	93, 1080, 1560
MspR9I	CCNGG	3 cut(s)	94, 847, 1101
MunI	CAATTG	1 cut(s)	1296
Mva1269I	GAATGC	2 cut(s)	139, 204
MvaI	CCWGG	2 cut(s)	847, 1101
MvnI	CGCG	1 cut(s)	801
MwoI	GCNNNNNNNGC	2 cut(s)	293, 1004
NciI	CCSGG	1 cut(s)	94
NdeII	GATC	7 cut(s)	175, 191, 262, 511, 650, 1121, 1366
NlaIII	CATG	6 cut(s)	149, 403, 407, 436, 862, 1023
NlaIV	GGNNCC	1 cut(s)	652
NmeAIII	GCCGAG	1 cut(s)	980
NmuCI	GTSAC	3 cut(s)	701, 841, 1303
NsbI	TGCGCA	1 cut(s)	138
NsiI	ATGCAT	1 cut(s)	405
NspI	RCATGY	1 cut(s)	403
PaeI	GCATGC	1 cut(s)	403
PaeR7I	CTCGAG	2 cut(s)	492, 1571
PciSI	GCTCTTC	1 cut(s)	1454
PctI	GAATGC	2 cut(s)	139, 204
PdmI	GAANNNNTTC	1 cut(s)	1446
PfeI	GAWTC	7 cut(s)	236, 248, 564, 569, 902, 1498, 1553
PflFI	GACNNNGTC	1 cut(s)	749
PflMI	CCANNNNNTGG	2 cut(s)	1671, 1704
PinAI	ACCGGT	1 cut(s)	1079
PkrI	GCNGC	7 cut(s)	16, 415, 474, 823, 1009, 1147, 1243
Psp6I	CCWGG	2 cut(s)	845, 1099
PspEI	GGTNACC	1 cut(s)	539
PspGI	CCWGG	2 cut(s)	845, 1099
PspN4I	GGNNCC	1 cut(s)	652
PspPI	GGNCC	1 cut(s)	1077
PspXI	VCTCGAGB	1 cut(s)	492
PsrI	GAACNNNNNNTAC	2 cut(s)	1609, 1641
PstI	CTGCAG	2 cut(s)	418, 1387
PstNI	CAGNNNCTG	2 cut(s)	1319, 1425
PsuI	RGATCY	1 cut(s)	650
PsyI	GACNNNGTC	1 cut(s)	749
RsaI	GTAC	6 cut(s)	86, 182, 576, 890, 1195, 1670
RsaNI	GTAC	6 cut(s)	85, 181, 575, 889, 1194, 1669
RseI	CAYNNNNRTG	3 cut(s)	144, 431, 1236
SalI	GTCGAC	1 cut(s)	1404
SapI	GCTCTTC	1 cut(s)	1454
SaqAI	TTAA	7 cut(s)	317, 804, 929, 942, 960, 1028, 1527
SatI	GCNGC	7 cut(s)	15, 414, 473, 822, 1008, 1146, 1242
Sau3AI	GATC	7 cut(s)	175, 191, 262, 511, 650, 1121, 1366
Sau96I	GGNCC	1 cut(s)	1077
ScaI	AGTACT	2 cut(s)	182, 1670
ScrFI	CCNGG	3 cut(s)	94, 847, 1101
SduI	GDGCHC	1 cut(s)	610
SfaNI	GCATC	4 cut(s)	352, 985, 1201, 1228
SfcI	CTRYAG	3 cut(s)	414, 706, 1383
Sfr274I	CTCGAG	2 cut(s)	492, 1571
SinI	GGWCC	1 cut(s)	1077
SlaI	CTCGAG	2 cut(s)	492, 1571
SmiMI	CAYNNNNRTG	3 cut(s)	144, 431, 1236
SmlI	CTYRAG	2 cut(s)	492, 1571
SmoI	CTYRAG	2 cut(s)	492, 1571
SpeI	ACTAGT	2 cut(s)	355, 1091
SphI	GCATGC	1 cut(s)	403
Sse9I	AATT	8 cut(s)	507, 825, 930, 1160, 1221, 1296, 1528, 1659
SsiI	CCGC	5 cut(s)	14, 349, 497, 713, 1131
SspMI	CTAG	5 cut(s)	356, 452, 1092, 1157, 1729
StyD4I	CCNGG	3 cut(s)	92, 845, 1099
StyI	CCWWGG	1 cut(s)	1204
TaaI	ACNGT	3 cut(s)	172, 981, 1647
TaiI	ACGT	2 cut(s)	156, 233
TaqI	TCGA	6 cut(s)	24, 493, 567, 1120, 1405, 1572
TasI	AATT	8 cut(s)	507, 825, 930, 1160, 1221, 1296, 1528, 1659
TatI	WGTACW	3 cut(s)	180, 574, 1668
TauI	GCSGC	1 cut(s)	17
TfiI	GAWTC	7 cut(s)	236, 248, 564, 569, 902, 1498, 1553
Tru1I	TTAA	7 cut(s)	317, 804, 929, 942, 960, 1028, 1527
Tru9I	TTAA	7 cut(s)	317, 804, 929, 942, 960, 1028, 1527
TscAI	CASTG	7 cut(s)	997, 1131, 1252, 1258, 1312, 1406, 1510
TseFI	GTSAC	3 cut(s)	701, 841, 1303
TseI	GCWGC	6 cut(s)	413, 472, 821, 1007, 1145, 1241
Tsp45I	GTSAC	3 cut(s)	701, 841, 1303
TspDTI	ATGAA	3 cut(s)	116, 660, 1712
TspGWI	ACGGA	2 cut(s)	1038, 1451
TspRI	CASTG	7 cut(s)	997, 1131, 1252, 1258, 1312, 1406, 1510
Tth111I	GACNNNGTC	1 cut(s)	749
Van91I	CCANNNNNTGG	2 cut(s)	1671, 1704
VpaK11BI	GGWCC	1 cut(s)	1077
XapI	RAATTY	2 cut(s)	1160, 1659
XceI	RCATGY	1 cut(s)	403
XcmI	CCANNNNNNNNNTGG	3 cut(s)	95, 152, 1705
XhoI	CTCGAG	2 cut(s)	492, 1571
XmiI	GTMKAC	1 cut(s)	1405
XmnI	GAANNNNTTC	1 cut(s)	1446
XspI	CTAG	5 cut(s)	356, 452, 1092, 1157, 1729
ZrmI	AGTACT	2 cut(s)	182, 1670
Zsp2I	ATGCAT	1 cut(s)	405

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.