FvH4_1g24940

Lipase (class 3)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0011011
Physical Location & Seq
Reverse (-)
16736919 .. 16741223
4305 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g24940.t3

Sequence Viewer

Length: 1950 bp
ATGGAAGCCGAAGCTTCACCGTTTGAGAGCAGTGAGCTGGTGGCGAGTTTGCTGGCGTCGACGCCTTTGCTCAGCGACTCATGGAGGCTGTGCAGCCTCTCCAACGCCACAGCTCTTTCGGGTTTCGTATCGGAGCGAATCGGAGATGTCGGCTACTTTGCTTTCTCAGCTTGCAGTATCCAAACGATCACGAACGACTCCGAGTACTACTCCACTTGCAGAAACTTGGTGCCATTGGATAGCGCCGGCGCCGGCGACGGTGACCGTCCTTTTGCGGTGTTGACGAAAAGTGGTAACAGTGGTATGAATGGGAAAGAAGATGAGGATGCAGTGATGGTTCATGCAGGCCTGCTCCGTCTCTTCTTGTCTCTTCGTAGCTCCCAAGCTTTCCAAGACCAGATGTTGGCGCTGATAAATGGAAGCAAGTCCATTGTGATCACAGGCCACTCTATAGGAGGAACAACTGCCTCACTCTGCGCTCTTTGGCTCCTTTGTTACCTGCAATCCATCTCTTCTACCCTTCCGGTGCTTTGCATTACATTCGGTTCACCATTACTTGGTAACGAATCGCTTTCCCGAGCAATCCTTAGGGAAAGATGGGGTGGCAATTTCTGCCATGTGGTGTCTAAGTATGACATCATGCCAAGACTCCTCTTTGCTCCTCTAGAGTCCTGCACTCGCCAACTGCATTTCTTGCTGCAGTACTGGCAGATGTCTATGTTGGCTTCTTCTCCAAGCAACTTTGGACAGCTTCCGGTGCTTCAGCTTGGTGAGGAAGAGAAAGCTCAACTCTTCAGCTTCGTATCACATTATAATTTGCTAGTGTCTTCAGTAGCACAAGCAGAAGCAAGAGAAGAGAAAGCAAATAGTTTGTATTGGCCCTTTGGGAACTACCTGTTTTGCTCACAAGAGGGAGCTATTTGTGTGGAGAATGCAGCATCTGTGATCAAAATGATGCATTTGATGCTTGCGACTGCAGATCCCAGCTACTGCATCGATGATCATCTAAATTATGGACAGTATGTTGGGATGATTTCTTCACAGCTCTTGAAGAAGAAAAGCGTGTTTCAAGGGGAAGTGATTCCGGAGTCAAGCTATGAAGCAGGGGTTGCACTGGCATTGCAGTCATCAGGAATAAGCCAACAGGAACCAACTGCCGGGCCGGCGGTAGATTGCCTCAAGATGGCTAGAGGAATGAGACATCTGCGTACACCAAGCCTGAACTGTGCAAACTTAGCCATCAGGCTATCCAAGGTCGTACCTTACAGAGCTCAAATAGAGTGGTATATGGTATCCTGTGATAAGTCTGATGAGCAACTTGGTTACTATGACTCCTTCAAGCGACGAGGATCATCGAAAAGGGATCATAAAATCAACATGAACCGTCTCTTGCTTTCTGGATTTTGGAATGATGTGCTGCGCATGCTGGAGAACAACGAGCTGCCTCATGATTTTAACAAGCGAGGAAAATGGGTAAACGGTTCCCAGTTCTACAAGCTACTAGTCGAGCCACTCGACATCGCAGAGTACTATAGATCAGATATGCACCGGATCAAGGGTCATTACTTGAAGCATGGAAGAGAGAGGAGGTTTGAGATTTTCGACAGGTGGTGGAGAGAAAGAGAGGTTGGTCCGGAAGAAAACACTAGTGTGAGAAGCAAGTTTGCAGGTTTGACTCAGGATTCTTGCTTCTGGGCGAGGGTGGAGGAAGCTAGAGAGTGTCTAGCTAATGTTAGAAGTGAGACTAATGTAAGGAAGCTGCCTTTGCTGTGGGAAAGTCTTAATAGCTTTGAAATGTATGCAACCAGGTTAGTTGACCGTAAGGAGGTCTCTAAAGACGTTGTAGCAAAGAACTCGAGCTATTCTTTGTGGGTAGAAGAGTTGAGAGAGCTGAAATCACAGATGCAGCAAATCCATCCTTCGGTCCCAAGGTTTAGAGATGGTGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lipase_3

Protein Analysis

650

Amino Acids

73.14

Weight (kDa)

6.32

Isoelectric Point (pI)

54.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipase_3 PF01764 105 - 219 3.5e-17 Lipase (class 3)
EDS1_EP PF18117 424 - 634 3.8e-70 Enhanced disease susceptibility 1 protein EP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G52430
fragaria_vesca FvH4_1g24940 FvH4_1g24940 FvH4_1g24940
malus_domestica MD15G1136300.v1.1
prunus_persica Prupe.4G276500_v2.0.a1 Prupe.4G276500_v2.0.a1
pyrus_communis pycom15g12290
rosa_chinensis RchiOBHm_Chr2g0122591
rosa_laevigata RLG00000018693
rosa_multiflora Rmu_sc0003133.1_g000001 Rmu_sc0010907.1_g000001
rosa_roxburghii Rroxscaffold_2G00121450
rosa_rugosa Rorug02G0239700 Rorug02G0239800
rosa_samantha Rh2AG298400 Rh2BG307100 Rh2CG285200 Rh2DG322000
rosa_wichuraiana Rw2G023720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 813
Acc16I TGCGCA 1 cut(s) 1421
Acc36I ACCTGC 2 cut(s) 507, 1658
AccB1I GGYRCC 2 cut(s) 229, 248
AccB7I CCANNNNNTGG 2 cut(s) 403, 557
AccI GTMKAC 1 cut(s) 59
AccIII TCCGGA 2 cut(s) 1084, 1633
AciI CCGC 2 cut(s) 275, 1166
AclWI GGATC 4 cut(s) 974, 1357, 1371, 1559
AcuI CTGAAG 3 cut(s) 746, 778, 813
AcyI GRCGYC 3 cut(s) 56, 62, 249
AfaI GTAC 5 cut(s) 206, 704, 1210, 1260, 1529
AfiI CCNNNNNNNGG 7 cut(s) 403, 557, 1157, 1183, 1555, 1825, 1921
AgsI TTSAA 5 cut(s) 1051, 1070, 1339, 1570, 1793
AhlI ACTAGT 2 cut(s) 1501, 1646
AjnI CCWGG 1 cut(s) 1805
AjuI GAANNNNNNNTTGG 2 cut(s) 1611, 1643
AleI CACNNNNGTG 1 cut(s) 1649
Alw21I GWGCWC 1 cut(s) 1273
Alw26I GTCTC 6 cut(s) 362, 372, 1192, 1391, 1736, 1834
AlwI GGATC 4 cut(s) 974, 1357, 1371, 1559
AlwNI CAGNNNCTG 2 cut(s) 941, 990
Ama87I CYCGRG 2 cut(s) 576, 1855
Aor13HI TCCGGA 2 cut(s) 1084, 1633
AoxI GGCC 4 cut(s) 346, 442, 878, 1160
ApeKI GCWGC 7 cut(s) 93, 697, 935, 1417, 1441, 1759, 1906
ArsI GACNNNNNNTTYG 2 cut(s) 254, 286
Asp700I GAANNNNTTC 1 cut(s) 1080
AspLEI GCGC 5 cut(s) 245, 251, 409, 479, 1422
AspS9I GGNCC 4 cut(s) 879, 1160, 1631, 1924
AsuC2I CCSGG 1 cut(s) 1159
AsuHPI GGTGA 4 cut(s) 9, 272, 540, 782
AvaI CYCGRG 2 cut(s) 576, 1855
AvaII GGWCC 2 cut(s) 1631, 1924
AxyI CCTNAGG 1 cut(s) 587
BanI GGYRCC 2 cut(s) 229, 248
BanII GRGCYC 1 cut(s) 1273
BbsI GAAGAC 1 cut(s) 819
Bbv12I GWGCWC 1 cut(s) 1273
BbvI GCAGC 7 cut(s) 105, 684, 947, 1404, 1428, 1746, 1918
BccI CCATC 7 cut(s) 328, 515, 591, 1177, 1247, 1923, 1934
BcgI CGANNNNNNTGC 6 cut(s) 49, 83, 523, 557, 1836, 1870
BciT130I CCWGG 1 cut(s) 1807
BciVI GTATCC 2 cut(s) 188, 1303
BclI TGATCA 3 cut(s) 435, 945, 1000
BcnI CCSGG 1 cut(s) 1159
BcoDI GTCTC 6 cut(s) 362, 372, 1192, 1391, 1736, 1834
BcuI ACTAGT 2 cut(s) 1501, 1646
BfaI CTAG 7 cut(s) 665, 821, 1188, 1502, 1647, 1713, 1724
BfmI CTRYAG 4 cut(s) 450, 698, 975, 1531
BfoI RGCGCY 3 cut(s) 246, 252, 410
BfuAI ACCTGC 2 cut(s) 507, 1658
BfuI GTATCC 2 cut(s) 188, 1303
BglI GCCNNNNNGGC 1 cut(s) 1163
BisI GCNGC 7 cut(s) 94, 698, 936, 1418, 1442, 1760, 1907
BlpI GCTNAGC 1 cut(s) 71
BlsI GCNGC 7 cut(s) 95, 699, 937, 1419, 1443, 1761, 1908
BmcAI AGTACT 3 cut(s) 206, 704, 1529
Bme1390I CCNGG 2 cut(s) 1159, 1807
Bme18I GGWCC 2 cut(s) 1631, 1924
BmeT110I CYCGRG 2 cut(s) 576, 1855
BmgT120I GGNCC 4 cut(s) 879, 1160, 1631, 1924
BmiI GGNNCC 6 cut(s) 231, 250, 488, 1149, 1483, 1926
BmrFI CCNGG 2 cut(s) 1159, 1807
BmrI ACTGGG 1 cut(s) 1480
BmsI GCATC 6 cut(s) 316, 945, 947, 954, 1002, 1893
BmuI ACTGGG 1 cut(s) 1480
BpiI GAAGAC 1 cut(s) 819
BplI GAGNNNNNCTC 2 cut(s) 194, 226
BpmI CTGGAG 1 cut(s) 1448
Bpu1102I GCTNAGC 1 cut(s) 71
BpuEI CTTGAG 1 cut(s) 1163
BpuMI CCSGG 1 cut(s) 1159
Bsa29I ATCGAT 1 cut(s) 996
BsaBI GATNNNNATC 1 cut(s) 1002
BsaHI GRCGYC 3 cut(s) 56, 62, 249
BsaI GGTCTC 1 cut(s) 1834
BsaJI CCNNGG 2 cut(s) 1251, 1928
BsaWI WCCGGW 5 cut(s) 523, 754, 1084, 1548, 1633
BsaXI ACNNNNNCTCC 2 cut(s) 1316, 1346
Bsc4I CCNNNNNNNGG 7 cut(s) 403, 557, 1157, 1183, 1555, 1825, 1921
Bse118I RCCGGY 3 cut(s) 245, 251, 1162
Bse1I ACTGG 3 cut(s) 710, 1119, 1486
Bse21I CCTNAGG 1 cut(s) 587
Bse3DI GCAATG 1 cut(s) 1118
Bse8I GATNNNNATC 1 cut(s) 1002
BseAI TCCGGA 2 cut(s) 1084, 1633
BseBI CCWGG 1 cut(s) 1807
BseCI ATCGAT 1 cut(s) 996
BseDI CCNNGG 2 cut(s) 1251, 1928
BseGI GGATG 3 cut(s) 331, 1035, 1915
BseJI GATNNNNATC 1 cut(s) 1002
BseLI CCNNNNNNNGG 7 cut(s) 403, 557, 1157, 1183, 1555, 1825, 1921
BseMI GCAATG 1 cut(s) 1118
BseMII CTCAG 3 cut(s) 85, 180, 1691
BseNI ACTGG 3 cut(s) 710, 1119, 1486
BseRI GAGGAG 3 cut(s) 641, 651, 1600
BseXI GCAGC 7 cut(s) 105, 684, 947, 1404, 1428, 1746, 1918
BseYI CCCAGC 1 cut(s) 983
BsgI GTGCAG 2 cut(s) 112, 658
BshFI GGCC 4 cut(s) 348, 444, 880, 1162
BshNI GGYRCC 2 cut(s) 229, 248
BshVI ATCGAT 1 cut(s) 996
BsiHKAI GWGCWC 1 cut(s) 1273
BsiHKCI CYCGRG 2 cut(s) 576, 1855
BsiSI CCGG 9 cut(s) 246, 252, 524, 755, 1085, 1158, 1163, 1549, 1634
BslFI GGGAC 1 cut(s) 1910
BslI CCNNNNNNNGG 7 cut(s) 403, 557, 1157, 1183, 1555, 1825, 1921
BsmAI GTCTC 6 cut(s) 362, 372, 1192, 1391, 1736, 1834
BsmBI CGTCTC 2 cut(s) 362, 1391
BsmFI GGGAC 1 cut(s) 1910
BsmI GAATGC 1 cut(s) 937
BsnI GGCC 4 cut(s) 348, 444, 880, 1162
Bso31I GGTCTC 1 cut(s) 1834
BsoBI CYCGRG 2 cut(s) 576, 1855
Bsp1286I GDGCHC 1 cut(s) 1273
Bsp13I TCCGGA 2 cut(s) 1084, 1633
Bsp143I GATC 9 cut(s) 186, 435, 945, 979, 1000, 1349, 1363, 1535, 1551
Bsp1720I GCTNAGC 1 cut(s) 71
BspACI CCGC 2 cut(s) 275, 1166
BspANI GGCC 4 cut(s) 348, 444, 880, 1162
BspCNI CTCAG 3 cut(s) 84, 179, 1690
BspDI ATCGAT 1 cut(s) 996
BspEI TCCGGA 2 cut(s) 1084, 1633
BspHI TCATGA 1 cut(s) 1447
BspLI GGNNCC 6 cut(s) 231, 250, 488, 1149, 1483, 1926
BspMAI CTGCAG 2 cut(s) 702, 979
BspMI ACCTGC 2 cut(s) 507, 1658
BspPI GGATC 4 cut(s) 974, 1357, 1371, 1559
BspT107I GGYRCC 2 cut(s) 229, 248
BspTNI GGTCTC 1 cut(s) 1834
BsrDI GCAATG 1 cut(s) 1118
BsrFI RCCGGY 3 cut(s) 245, 251, 1162
BsrI ACTGG 3 cut(s) 710, 1119, 1486
BssAI RCCGGY 3 cut(s) 245, 251, 1162
BssECI CCNNGG 2 cut(s) 1251, 1928
BssMI GATC 9 cut(s) 186, 435, 945, 979, 1000, 1349, 1363, 1535, 1551
BssNI GRCGYC 3 cut(s) 56, 62, 249
BssT1I CCWWGG 2 cut(s) 1251, 1928
Bst2UI CCWGG 1 cut(s) 1807
Bst4CI ACNGT 9 cut(s) 21, 260, 266, 299, 1020, 1226, 1385, 1481, 1820
Bst6I CTCTTC 8 cut(s) 365, 375, 517, 771, 797, 849, 1573, 1872
BstACI GRCGYC 3 cut(s) 56, 62, 249
BstAPI GCANNNNNTGC 4 cut(s) 612, 694, 964, 1109
BstC8I GCNNGC 9 cut(s) 54, 172, 247, 253, 346, 350, 969, 1164, 1424
BstDEI CTNAG 6 cut(s) 71, 166, 587, 627, 1234, 1677
BstEII GGTNACC 1 cut(s) 260
BstF5I GGATG 3 cut(s) 331, 1035, 1915
BstH2I RGCGCY 3 cut(s) 246, 252, 410
BstHHI GCGC 5 cut(s) 245, 251, 409, 479, 1422
BstKTI GATC 9 cut(s) 189, 438, 948, 982, 1003, 1352, 1366, 1538, 1554
BstMAI GTCTC 6 cut(s) 362, 372, 1192, 1391, 1736, 1834
BstMBI GATC 9 cut(s) 186, 435, 945, 979, 1000, 1349, 1363, 1535, 1551
BstNI CCWGG 1 cut(s) 1807
BstNSI RCATGY 1 cut(s) 1426
BstPI GGTNACC 1 cut(s) 260
BstSCI CCNGG 2 cut(s) 1157, 1805
BstSFI CTRYAG 4 cut(s) 450, 698, 975, 1531
BstV1I GCAGC 7 cut(s) 105, 684, 947, 1404, 1428, 1746, 1918
BstV2I GAAGAC 1 cut(s) 819
BstX2I RGATCY 1 cut(s) 979
BstYI RGATCY 1 cut(s) 979
Bsu15I ATCGAT 1 cut(s) 996
Bsu36I CCTNAGG 1 cut(s) 587
BsuI GTATCC 2 cut(s) 188, 1303
BsuRI GGCC 4 cut(s) 348, 444, 880, 1162
BsuTUI ATCGAT 1 cut(s) 996
BtgZI GCGATG 1 cut(s) 1504
BtsCI GGATG 3 cut(s) 331, 1035, 1915
BtsI GCAGTG 2 cut(s) 37, 336
BtsIMutI CAGTG 4 cut(s) 37, 304, 336, 1112
BveI ACCTGC 2 cut(s) 507, 1658
Cac8I GCNNGC 9 cut(s) 54, 172, 247, 253, 346, 350, 969, 1164, 1424
CaiI CAGNNNCTG 2 cut(s) 941, 990
CciI TCATGA 1 cut(s) 1447
CfoI GCGC 5 cut(s) 245, 251, 409, 479, 1422
Cfr10I RCCGGY 3 cut(s) 245, 251, 1162
Cfr13I GGNCC 4 cut(s) 879, 1160, 1631, 1924
ClaI ATCGAT 1 cut(s) 996
CseI GACGC 2 cut(s) 45, 70
CsiI ACCWGGT 1 cut(s) 1805
Csp6I GTAC 5 cut(s) 205, 703, 1209, 1259, 1528
CspCI CAANNNNNGTGG 2 cut(s) 1262, 1297
CviAII CATG 8 cut(s) 81, 341, 617, 640, 1378, 1423, 1448, 1574
CviQI GTAC 5 cut(s) 205, 703, 1209, 1259, 1528
DdeI CTNAG 6 cut(s) 71, 166, 587, 627, 1234, 1677
DinI GGCGCC 1 cut(s) 250
DpnI GATC 9 cut(s) 188, 437, 947, 981, 1002, 1351, 1365, 1537, 1553
DpnII GATC 9 cut(s) 186, 435, 945, 979, 1000, 1349, 1363, 1535, 1551
Eam1104I CTCTTC 8 cut(s) 365, 375, 517, 771, 797, 849, 1573, 1872
EarI CTCTTC 8 cut(s) 365, 375, 517, 771, 797, 849, 1573, 1872
Ecl136II GAGCTC 1 cut(s) 1271
Eco130I CCWWGG 2 cut(s) 1251, 1928
Eco147I AGGCCT 1 cut(s) 348
Eco24I GRGCYC 1 cut(s) 1273
Eco31I GGTCTC 1 cut(s) 1834
Eco47I GGWCC 2 cut(s) 1631, 1924
Eco53kI GAGCTC 1 cut(s) 1271
Eco57I CTGAAG 3 cut(s) 746, 778, 813
Eco81I CCTNAGG 1 cut(s) 587
Eco88I CYCGRG 2 cut(s) 576, 1855
Eco91I GGTNACC 1 cut(s) 260
EcoICRI GAGCTC 1 cut(s) 1271
EcoO65I GGTNACC 1 cut(s) 260
EcoRII CCWGG 1 cut(s) 1805
EcoT14I CCWWGG 2 cut(s) 1251, 1928
EcoT22I ATGCAT 1 cut(s) 960
EcoT38I GRGCYC 1 cut(s) 1273
EgeI GGCGCC 1 cut(s) 250
EheI GGCGCC 1 cut(s) 250
ErhI CCWWGG 2 cut(s) 1251, 1928
Esp3I CGTCTC 2 cut(s) 362, 1391
FaeI CATG 8 cut(s) 84, 344, 620, 643, 1381, 1426, 1451, 1577
FaqI GGGAC 1 cut(s) 1910
FatI CATG 8 cut(s) 80, 340, 616, 639, 1377, 1422, 1447, 1573
FbaI TGATCA 3 cut(s) 435, 945, 1000
FblI GTMKAC 1 cut(s) 59
Fnu4HI GCNGC 7 cut(s) 94, 698, 936, 1418, 1442, 1760, 1907
FokI GGATG 3 cut(s) 338, 1042, 1902
FriOI GRGCYC 1 cut(s) 1273
Fsp4HI GCNGC 7 cut(s) 94, 698, 936, 1418, 1442, 1760, 1907
FspBI CTAG 7 cut(s) 665, 821, 1188, 1502, 1647, 1713, 1724
FspI TGCGCA 1 cut(s) 1421
GlaI GCGC 5 cut(s) 244, 250, 408, 478, 1421
GluI GCNGC 7 cut(s) 94, 698, 936, 1418, 1442, 1760, 1907
GsaI CCCAGC 1 cut(s) 987
GsuI CTGGAG 1 cut(s) 1448
HaeII RGCGCY 3 cut(s) 246, 252, 410
HaeIII GGCC 4 cut(s) 348, 444, 880, 1162
HapII CCGG 9 cut(s) 246, 252, 524, 755, 1085, 1158, 1163, 1549, 1634
HgaI GACGC 2 cut(s) 45, 70
HhaI GCGC 5 cut(s) 245, 251, 409, 479, 1422
Hin1I GRCGYC 3 cut(s) 56, 62, 249
Hin1II CATG 8 cut(s) 84, 344, 620, 643, 1381, 1426, 1451, 1577
Hin6I GCGC 5 cut(s) 243, 249, 407, 477, 1420
HinP1I GCGC 5 cut(s) 243, 249, 407, 477, 1420
HincII GTYRAC 3 cut(s) 60, 282, 1816
HindII GTYRAC 3 cut(s) 60, 282, 1816
HindIII AAGCTT 2 cut(s) 12, 384
HpaII CCGG 9 cut(s) 246, 252, 524, 755, 1085, 1158, 1163, 1549, 1634
HphI GGTGA 4 cut(s) 9, 272, 540, 782
Hpy166II GTNNAC 6 cut(s) 60, 282, 548, 1211, 1477, 1816
Hpy188I TCNGA 5 cut(s) 133, 143, 202, 1309, 1540
Hpy8I GTNNAC 6 cut(s) 60, 282, 548, 1211, 1477, 1816
Hpy99I CGWCG 4 cut(s) 61, 64, 260, 1347
HpyAV CCTTC 3 cut(s) 530, 1345, 1929
HpyCH4III ACNGT 9 cut(s) 21, 260, 266, 299, 1020, 1226, 1385, 1481, 1820
HpyCH4IV ACGT 1 cut(s) 1839
HpyF3I CTNAG 6 cut(s) 71, 166, 587, 627, 1234, 1677
HpySE526I ACGT 1 cut(s) 1839
Hsp92I GRCGYC 3 cut(s) 56, 62, 249
Hsp92II CATG 8 cut(s) 84, 344, 620, 643, 1381, 1426, 1451, 1577
HspAI GCGC 5 cut(s) 243, 249, 407, 477, 1420
KasI GGCGCC 1 cut(s) 248
Kpn2I TCCGGA 2 cut(s) 1084, 1633
KroI GCCGGC 3 cut(s) 245, 251, 1162
KroNI GCCGGC 3 cut(s) 247, 253, 1164
Ksp22I TGATCA 3 cut(s) 435, 945, 1000
Kzo9I GATC 9 cut(s) 186, 435, 945, 979, 1000, 1349, 1363, 1535, 1551
LmnI GCTCC 6 cut(s) 133, 357, 383, 492, 664, 914
Lsp1109I GCAGC 7 cut(s) 105, 684, 947, 1404, 1428, 1746, 1918
LweI GCATC 6 cut(s) 316, 945, 947, 954, 1002, 1893
MabI ACCWGGT 1 cut(s) 1805
MaeI CTAG 7 cut(s) 665, 821, 1188, 1502, 1647, 1713, 1724
MaeII ACGT 1 cut(s) 1839
MaeIII GTNAC 5 cut(s) 260, 293, 494, 560, 1322
MalI GATC 9 cut(s) 188, 437, 947, 981, 1002, 1351, 1365, 1537, 1553
MboI GATC 9 cut(s) 186, 435, 945, 979, 1000, 1349, 1363, 1535, 1551
MflI RGATCY 1 cut(s) 979
MhlI GDGCHC 1 cut(s) 1273
MluCI AATT 3 cut(s) 607, 814, 1009
Mly113I GGCGCC 1 cut(s) 249
MlyI GAGTC 7 cut(s) 71, 191, 642, 677, 1097, 1325, 1669
MmeI TCCRAC 1 cut(s) 126
Mph1103I ATGCAT 1 cut(s) 960
MreI CGCCGGCG 2 cut(s) 245, 251
MroI TCCGGA 2 cut(s) 1084, 1633
MroNI GCCGGC 3 cut(s) 245, 251, 1162
MroXI GAANNNNTTC 1 cut(s) 1080
MseI TTAA 2 cut(s) 1455, 1782
MslI CAYNNNNRTG 1 cut(s) 1649
MspI CCGG 9 cut(s) 246, 252, 524, 755, 1085, 1158, 1163, 1549, 1634
MspR9I CCNGG 2 cut(s) 1159, 1807
Mva1269I GAATGC 1 cut(s) 937
MvaI CCWGG 1 cut(s) 1807
NaeI GCCGGC 3 cut(s) 247, 253, 1164
NarI GGCGCC 1 cut(s) 249
NciI CCSGG 1 cut(s) 1159
NdeII GATC 9 cut(s) 186, 435, 945, 979, 1000, 1349, 1363, 1535, 1551
NgoMIV GCCGGC 3 cut(s) 245, 251, 1162
NlaIII CATG 8 cut(s) 84, 344, 620, 643, 1381, 1426, 1451, 1577
NlaIV GGNNCC 6 cut(s) 231, 250, 488, 1149, 1483, 1926
NmuCI GTSAC 1 cut(s) 260
NsbI TGCGCA 1 cut(s) 1421
NsiI ATGCAT 1 cut(s) 960
NspI RCATGY 1 cut(s) 1426
OliI CACNNNNGTG 1 cut(s) 1649
PaeI GCATGC 1 cut(s) 1426
PaeR7I CTCGAG 1 cut(s) 1855
PagI TCATGA 1 cut(s) 1447
PceI AGGCCT 1 cut(s) 348
PcsI WCGNNNNNNNCGW 1 cut(s) 1512
PctI GAATGC 1 cut(s) 937
PdiI GCCGGC 3 cut(s) 247, 253, 1164
PdmI GAANNNNTTC 1 cut(s) 1080
PfeI GAWTC 4 cut(s) 138, 566, 1081, 1682
PflMI CCANNNNNTGG 2 cut(s) 403, 557
PkrI GCNGC 7 cut(s) 95, 699, 937, 1419, 1443, 1761, 1908
PleI GAGTC 7 cut(s) 71, 191, 642, 676, 1096, 1325, 1669
PluTI GGCGCC 1 cut(s) 252
PpsI GAGTC 7 cut(s) 71, 191, 642, 676, 1096, 1325, 1669
PsiI TTATAA 1 cut(s) 813
Psp124BI GAGCTC 1 cut(s) 1273
Psp6I CCWGG 1 cut(s) 1805
PspEI GGTNACC 1 cut(s) 260
PspFI CCCAGC 1 cut(s) 983
PspGI CCWGG 1 cut(s) 1805
PspN4I GGNNCC 6 cut(s) 231, 250, 488, 1149, 1483, 1926
PspPI GGNCC 4 cut(s) 879, 1160, 1631, 1924
PspXI VCTCGAGB 1 cut(s) 1855
PstI CTGCAG 2 cut(s) 702, 979
PstNI CAGNNNCTG 2 cut(s) 941, 990
PsuI RGATCY 1 cut(s) 979
RsaI GTAC 5 cut(s) 206, 704, 1210, 1260, 1529
RsaNI GTAC 5 cut(s) 205, 703, 1209, 1259, 1528
RseI CAYNNNNRTG 1 cut(s) 1649
SacI GAGCTC 1 cut(s) 1273
SalI GTCGAC 1 cut(s) 58
SaqAI TTAA 2 cut(s) 1455, 1782
SatI GCNGC 7 cut(s) 94, 698, 936, 1418, 1442, 1760, 1907
Sau3AI GATC 9 cut(s) 186, 435, 945, 979, 1000, 1349, 1363, 1535, 1551
Sau96I GGNCC 4 cut(s) 879, 1160, 1631, 1924
ScaI AGTACT 3 cut(s) 206, 704, 1529
SchI GAGTC 7 cut(s) 71, 191, 642, 677, 1097, 1325, 1669
ScrFI CCNGG 2 cut(s) 1159, 1807
SduI GDGCHC 1 cut(s) 1273
SexAI ACCWGGT 1 cut(s) 1805
SfaNI GCATC 6 cut(s) 316, 945, 947, 954, 1002, 1893
SfcI CTRYAG 4 cut(s) 450, 698, 975, 1531
SfoI GGCGCC 1 cut(s) 250
Sfr274I CTCGAG 1 cut(s) 1855
SgrAI CRCCGGYG 2 cut(s) 245, 251
SgrDI CGTCGACG 1 cut(s) 58
SinI GGWCC 2 cut(s) 1631, 1924
SlaI CTCGAG 1 cut(s) 1855
SmiMI CAYNNNNRTG 1 cut(s) 1649
SmlI CTYRAG 2 cut(s) 1178, 1855
SmoI CTYRAG 2 cut(s) 1178, 1855
SpeI ACTAGT 2 cut(s) 1501, 1646
SphI GCATGC 1 cut(s) 1426
Sse9I AATT 3 cut(s) 607, 814, 1009
SseBI AGGCCT 1 cut(s) 348
SsiI CCGC 2 cut(s) 275, 1166
SspDI GGCGCC 1 cut(s) 248
SspMI CTAG 7 cut(s) 665, 821, 1188, 1502, 1647, 1713, 1724
SstI GAGCTC 1 cut(s) 1273
StuI AGGCCT 1 cut(s) 348
StyD4I CCNGG 2 cut(s) 1157, 1805
StyI CCWWGG 2 cut(s) 1251, 1928
TaaI ACNGT 9 cut(s) 21, 260, 266, 299, 1020, 1226, 1385, 1481, 1820
TaiI ACGT 1 cut(s) 1842
TaqI TCGA 7 cut(s) 59, 996, 1355, 1506, 1515, 1602, 1856
TaqII GACCGA 1 cut(s) 1912
TasI AATT 3 cut(s) 607, 814, 1009
TatI WGTACW 3 cut(s) 204, 702, 1527
TfiI GAWTC 4 cut(s) 138, 566, 1081, 1682
Tru1I TTAA 2 cut(s) 1455, 1782
Tru9I TTAA 2 cut(s) 1455, 1782
TscAI CASTG 4 cut(s) 37, 304, 336, 1119
TseFI GTSAC 1 cut(s) 260
TseI GCWGC 7 cut(s) 93, 697, 935, 1417, 1441, 1759, 1906
Tsp45I GTSAC 1 cut(s) 260
TspDTI ATGAA 4 cut(s) 320, 329, 1113, 1394
TspGWI ACGGA 1 cut(s) 344
TspRI CASTG 4 cut(s) 37, 304, 336, 1119
Van91I CCANNNNNTGG 2 cut(s) 403, 557
VpaK11BI GGWCC 2 cut(s) 1631, 1924
XbaI TCTAGA 1 cut(s) 664
XceI RCATGY 1 cut(s) 1426
XhoI CTCGAG 1 cut(s) 1855
XmiI GTMKAC 1 cut(s) 59
XmnI GAANNNNTTC 1 cut(s) 1080
XspI CTAG 7 cut(s) 665, 821, 1188, 1502, 1647, 1713, 1724
ZrmI AGTACT 3 cut(s) 206, 704, 1529
Zsp2I ATGCAT 1 cut(s) 960
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.