Rroxscaffold_2G00121450

Lipase (class 3)

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
54090239 .. 54095334
5096 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00121450.1

Sequence Viewer

Length: 1950 bp
ATGGAGGCCGAAGCTTCACCGTTTGAGAGCAGTGAGTTGGTGGCGAGTTTCCTGGCGTCGACGCCTTTGCTAAGCGAGTCATGGAGGCTGTGCAGCGTCGCCAACGCCGCCGCTCCATTGGGTTTCGTATCGGAGCGAATCGGAGATGTCGGGTACTTTGCTTTCTCGGCCTGCAGTACCCAAATGATCACGGAGGAGTCAGAATACTACTCCACTTGCAGAAACTTGGTGCCATTGGATAGCGCCGTCGACGGCGACGGTGACCGGCCTTTTTCGGTATTGACCAAAAGTAGTAACAGTAGTATCAATGGAGAAGAAGATGAGGGTGCAGTGATGGTTCATGCAGGGCTGCTCAATCTCTTCTTGTTTCTTCGTAGCTCCCCAGCTTTCATAGACCAGATGTCGGCGCTAATAAATGGAAGCAAGTCCATTGTGATCACAGGCCATTCTATAGCAGGAACAACTGCCTCACTCTGCGCTCTTTGGCTCCTTTGTCACCTGCAATCCGTCTCTTTTACCCTTTCGGTGCTTTGCATTACCTTCGGTTCACCATTACTTGGGAACGAATCGCTTTCGCGAGCAATCCTTAGGGAAAGATGGGGCGGCAATTTTTGCCATGTGGTGTCCAAGTATGACATCATGCCAAGACTCCTCTTCGCTCCTTTAGAGTCCTGCACTCGCCAACTTCATTTCTTGCTGCAATACTGGCAGATGTCTATGTTGGCTTCTTCTCCAGGCAACTTTGGACGGTTTCCAGTACTTCAACTCGGTGAGGAAGAGAAAGCTCAGCTCTTCAGCTTCATATCACTTTATAATTTGCGGGTGTCTTTAATAGCACAAGCAGAAGCAAGAGAAGAGAGAGCAAATAGTTTGTATTGGCCATTTGGGAACTACATGTTTTGCTCACAAGAGGGAGCTATTTGTGTGGATAATGCAGCATCTGTGATCGAGATGATGCGTTTGATGTTTATGACTGGTAATCCCAGTTGCTGTATCGATGATCATCTAAAATACGGACACTATGTTGGGAAGATTTCTTCACAGTTTCTGAATAAGAAAAGCTTCTTGCAAGGGGAAGTGATTCCTGAGTCAAGCTATGAAGCAGGGGTTGCACTGGCATTGCAGTCATCAGGAATAAGTAAACAGGAACCAGCTGCCAGACCGGCGGAAGATTGCCTAAAGAAGGCTAGGGGAATCAGACATATGCGTACACCAAGCCTCAACGCTGCAAACTTAGCCATCAGATATTCCAAGGTTACACCTTACAGAGCTCAAATAGAGTGGTATATGGCATCCTGCGATAAGTCTGATGAGCAACTTGGTTACTACGACTCCTTCAAGCAACGGGGATCATCCAAAAGGGACCACAAAGTCAACATGAACCGGCTCTTGCTTGCTGGATTTTGGAATGATGTGCTCCGCATGCTGGAGAACAACGAGCTGCCTCATGATTTTCACAAGCGAGCAAAATGGGTAAACGCTTCCCAGTTTTACAAGCTCCTGGTAGAGCCACTGGACATCGCAGAGTATTATAGATCTGGTATGCCCCGGAGCAAGGGTCATTACTTGAAGCATGGAAGAGAGAGGAGGTATGAGATTTTCGACAGGTGGTGGAGAGAGAGAGAGGTTGGTCCAGAAGAAAACACTAGTATGAGAAGCAAATTTGCAGGTTTGACTCAGGACTCTTGCTTCTGGGCTAAGGTGGAGGAAGCTAGAGACTGGCTAGCTAATGTTAGAAGCGAGAGTGATGCAAGGAAGCTGGCTCTGATGTGGGAAAATATCAATAACTTTGAAAGGTATGCAACCAGATTAGTTGATTTCAAGGAGGTCTCCAAAGACGTTGTAGCAAAGAATTCGAGCTATTCTAAGTGGGTAGAAGAGTTGAGAGAATTGAAATCTCAGATGCAGCAAATCCGTCCTCAGTTCCCAAGGTTTAGAGATGGTGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

649

Amino Acids

73.6

Weight (kDa)

6.7

Isoelectric Point (pI)

54.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipase_3 PF01764 106 - 219 1.7e-14 Lipase (class 3)
EDS1_EP PF18117 424 - 634 2.6e-72 Enhanced disease susceptibility 1 protein EP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011011)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 813
AarI CACCTGC 1 cut(s) 507
AasI GACNNNNNNGTC 1 cut(s) 1370
Acc36I ACCTGC 2 cut(s) 507, 1658
AccB1I GGYRCC 1 cut(s) 229
AccB7I CCANNNNNTGG 1 cut(s) 557
AccBSI CCGCTC 1 cut(s) 113
AccI GTMKAC 2 cut(s) 59, 249
AccII CGCG 1 cut(s) 577
AciI CCGC 6 cut(s) 108, 111, 603, 820, 1166, 1420
AclWI GGATC 1 cut(s) 1357
AcoI YGGCCR 1 cut(s) 878
AcsI RAATTY 2 cut(s) 1661, 1852
AcuI CTGAAG 1 cut(s) 778
AcyI GRCGYC 2 cut(s) 56, 62
AfaI GTAC 4 cut(s) 155, 178, 759, 1210
AfiI CCNNNNNNNGG 5 cut(s) 403, 557, 1183, 1426, 1555
AflIII ACRYGT 1 cut(s) 894
AgsI TTSAA 6 cut(s) 764, 1339, 1570, 1793, 1822, 1894
AhdI GACNNNNNGTC 1 cut(s) 400
AhlI ACTAGT 1 cut(s) 1646
AjnI CCWGG 3 cut(s) 51, 733, 1500
Alw21I GWGCWC 2 cut(s) 1273, 1419
Alw26I GTCTC 3 cut(s) 514, 1710, 1834
AlwI GGATC 1 cut(s) 1357
AlwNI CAGNNNCTG 3 cut(s) 941, 990, 1048
AoxI GGCC 5 cut(s) 6, 168, 266, 442, 878
ApeKI GCWGC 8 cut(s) 93, 349, 697, 935, 1154, 1226, 1441, 1906
ApoI RAATTY 2 cut(s) 1661, 1852
Asp700I GAANNNNTTC 2 cut(s) 1061, 1080
AspLEI GCGC 3 cut(s) 245, 409, 479
AspS9I GGNCC 2 cut(s) 1363, 1631
AsuC2I CCSGG 1 cut(s) 1549
AsuHPI GGTGA 5 cut(s) 9, 272, 488, 540, 782
AsuNHI GCTAGC 1 cut(s) 1723
AvaII GGWCC 2 cut(s) 1363, 1631
AxyI CCTNAGG 1 cut(s) 587
BaeI ACNNNNGTAYC 2 cut(s) 286, 319
BalI TGGCCA 1 cut(s) 880
BanI GGYRCC 1 cut(s) 229
BanII GRGCYC 1 cut(s) 1273
Bbv12I GWGCWC 2 cut(s) 1273, 1419
BbvI GCAGC 8 cut(s) 105, 336, 684, 947, 1141, 1213, 1428, 1918
BccI CCATC 4 cut(s) 328, 591, 1247, 1934
BceAI ACGGC 2 cut(s) 230, 268
BcgI CGANNNNNNTGC 8 cut(s) 49, 83, 523, 557, 1730, 1764, 1836, 1870
BciT130I CCWGG 3 cut(s) 53, 735, 1502
BclI TGATCA 3 cut(s) 186, 435, 1000
BcnI CCSGG 1 cut(s) 1549
BcoDI GTCTC 3 cut(s) 514, 1710, 1834
BcuI ACTAGT 1 cut(s) 1646
BfaI CTAG 4 cut(s) 1188, 1647, 1713, 1724
BfmI CTRYAG 2 cut(s) 172, 450
BfoI RGCGCY 2 cut(s) 246, 410
BfuAI ACCTGC 2 cut(s) 507, 1658
BglI GCCNNNNNGGC 1 cut(s) 1163
BglII AGATCT 1 cut(s) 1535
BlpI GCTNAGC 2 cut(s) 71, 786
BmcAI AGTACT 1 cut(s) 759
Bme1390I CCNGG 4 cut(s) 53, 735, 1502, 1549
Bme18I GGWCC 2 cut(s) 1363, 1631
BmeRI GACNNNNNGTC 1 cut(s) 400
BmgT120I GGNCC 2 cut(s) 1363, 1631
BmiI GGNNCC 4 cut(s) 231, 488, 1149, 1364
BmrFI CCNGG 4 cut(s) 53, 735, 1502, 1549
BmrI ACTGGG 2 cut(s) 978, 1480
BmsI GCATC 5 cut(s) 945, 947, 1301, 1738, 1893
BmtI GCTAGC 1 cut(s) 1727
BmuI ACTGGG 2 cut(s) 978, 1480
BpmI CTGGAG 2 cut(s) 717, 1448
Bpu10I CCTNAGC 1 cut(s) 1698
Bpu1102I GCTNAGC 2 cut(s) 71, 786
BpuMI CCSGG 1 cut(s) 1549
Bsa29I ATCGAT 1 cut(s) 996
BsaBI GATNNNNATC 1 cut(s) 1002
BsaHI GRCGYC 2 cut(s) 56, 62
BsaI GGTCTC 1 cut(s) 1834
BsaJI CCNNGG 3 cut(s) 1251, 1547, 1928
BsaXI ACNNNNNCTCC 4 cut(s) 1316, 1346, 1543, 1573
Bsc4I CCNNNNNNNGG 5 cut(s) 403, 557, 1183, 1426, 1555
Bse118I RCCGGY 3 cut(s) 264, 1162, 1383
Bse1I ACTGG 8 cut(s) 710, 755, 979, 984, 1119, 1486, 1518, 1724
Bse21I CCTNAGG 1 cut(s) 587
Bse3DI GCAATG 1 cut(s) 1118
Bse8I GATNNNNATC 1 cut(s) 1002
BseBI CCWGG 3 cut(s) 53, 735, 1502
BseCI ATCGAT 1 cut(s) 996
BseDI CCNNGG 3 cut(s) 1251, 1547, 1928
BseGI GGATG 2 cut(s) 1292, 1352
BseJI GATNNNNATC 1 cut(s) 1002
BseLI CCNNNNNNNGG 5 cut(s) 403, 557, 1183, 1426, 1555
BseMI GCAATG 1 cut(s) 1118
BseMII CTCAG 5 cut(s) 800, 1077, 1691, 1913, 1934
BseNI ACTGG 8 cut(s) 710, 755, 979, 984, 1119, 1486, 1518, 1724
BseRI GAGGAG 3 cut(s) 209, 641, 1600
BseXI GCAGC 8 cut(s) 105, 336, 684, 947, 1141, 1213, 1428, 1918
BseYI CCCAGC 1 cut(s) 382
BsgI GTGCAG 3 cut(s) 112, 348, 658
Bsh1236I CGCG 1 cut(s) 577
BshFI GGCC 5 cut(s) 8, 170, 268, 444, 880
BshNI GGYRCC 1 cut(s) 229
BshVI ATCGAT 1 cut(s) 996
BsiHKAI GWGCWC 2 cut(s) 1273, 1419
BsiSI CCGG 4 cut(s) 265, 1163, 1384, 1549
BslFI GGGAC 1 cut(s) 1376
BslI CCNNNNNNNGG 5 cut(s) 403, 557, 1183, 1426, 1555
BsmAI GTCTC 3 cut(s) 514, 1710, 1834
BsmBI CGTCTC 1 cut(s) 514
BsmFI GGGAC 1 cut(s) 1376
BsnI GGCC 5 cut(s) 8, 170, 268, 444, 880
Bso31I GGTCTC 1 cut(s) 1834
Bsp1286I GDGCHC 2 cut(s) 1273, 1419
Bsp143I GATC 6 cut(s) 186, 435, 945, 1000, 1349, 1535
Bsp1720I GCTNAGC 2 cut(s) 71, 786
Bsp68I TCGCGA 1 cut(s) 577
BspACI CCGC 6 cut(s) 108, 111, 603, 820, 1166, 1420
BspANI GGCC 5 cut(s) 8, 170, 268, 444, 880
BspCNI CTCAG 5 cut(s) 799, 1078, 1690, 1912, 1933
BspDI ATCGAT 1 cut(s) 996
BspFNI CGCG 1 cut(s) 577
BspHI TCATGA 1 cut(s) 1447
BspLI GGNNCC 4 cut(s) 231, 488, 1149, 1364
BspMAI CTGCAG 1 cut(s) 176
BspMI ACCTGC 2 cut(s) 507, 1658
BspOI GCTAGC 1 cut(s) 1727
BspPI GGATC 1 cut(s) 1357
BspQI GCTCTTC 1 cut(s) 797
BspT107I GGYRCC 1 cut(s) 229
BspTNI GGTCTC 1 cut(s) 1834
BsrBI CCGCTC 1 cut(s) 113
BsrDI GCAATG 1 cut(s) 1118
BsrFI RCCGGY 3 cut(s) 264, 1162, 1383
BsrI ACTGG 8 cut(s) 710, 755, 979, 984, 1119, 1486, 1518, 1724
BssAI RCCGGY 3 cut(s) 264, 1162, 1383
BssECI CCNNGG 3 cut(s) 1251, 1547, 1928
BssMI GATC 6 cut(s) 186, 435, 945, 1000, 1349, 1535
BssNI GRCGYC 2 cut(s) 56, 62
BssT1I CCWWGG 2 cut(s) 1251, 1928
Bst2UI CCWGG 3 cut(s) 53, 735, 1502
Bst4CI ACNGT 5 cut(s) 21, 260, 299, 750, 1044
Bst6I CTCTTC 7 cut(s) 365, 659, 771, 797, 849, 1573, 1872
BstACI GRCGYC 2 cut(s) 56, 62
BstAPI GCANNNNNTGC 2 cut(s) 612, 1109
BstC8I GCNNGC 7 cut(s) 172, 579, 1395, 1424, 1464, 1725, 1761
BstEII GGTNACC 1 cut(s) 260
BstENI CCTNNNNNAGG 1 cut(s) 1181
BstF5I GGATG 2 cut(s) 1292, 1352
BstFNI CGCG 1 cut(s) 577
BstH2I RGCGCY 2 cut(s) 246, 410
BstHHI GCGC 3 cut(s) 245, 409, 479
BstKTI GATC 6 cut(s) 189, 438, 948, 1003, 1352, 1538
BstMAI GTCTC 3 cut(s) 514, 1710, 1834
BstMBI GATC 6 cut(s) 186, 435, 945, 1000, 1349, 1535
BstMWI GCNNNNNNNGC 8 cut(s) 107, 167, 612, 706, 1109, 1163, 1235, 1423
BstNI CCWGG 3 cut(s) 53, 735, 1502
BstNSI RCATGY 2 cut(s) 898, 1426
BstPI GGTNACC 1 cut(s) 260
BstSCI CCNGG 4 cut(s) 51, 733, 1500, 1547
BstSFI CTRYAG 2 cut(s) 172, 450
BstUI CGCG 1 cut(s) 577
BstV1I GCAGC 8 cut(s) 105, 336, 684, 947, 1141, 1213, 1428, 1918
BstX2I RGATCY 1 cut(s) 1535
BstYI RGATCY 1 cut(s) 1535
Bsu15I ATCGAT 1 cut(s) 996
Bsu36I CCTNAGG 1 cut(s) 587
BsuRI GGCC 5 cut(s) 8, 170, 268, 444, 880
BsuTUI ATCGAT 1 cut(s) 996
BtgZI GCGATG 1 cut(s) 1504
BtsCI GGATG 2 cut(s) 1292, 1352
BtsI GCAGTG 2 cut(s) 37, 336
BtsIMutI CAGTG 4 cut(s) 37, 336, 1112, 1511
BtuMI TCGCGA 1 cut(s) 577
BveI ACCTGC 2 cut(s) 507, 1658
Cac8I GCNNGC 7 cut(s) 172, 579, 1395, 1424, 1464, 1725, 1761
CaiI CAGNNNCTG 3 cut(s) 941, 990, 1048
CciI TCATGA 1 cut(s) 1447
CfoI GCGC 3 cut(s) 245, 409, 479
Cfr10I RCCGGY 3 cut(s) 264, 1162, 1383
Cfr13I GGNCC 2 cut(s) 1363, 1631
ClaI ATCGAT 1 cut(s) 996
CseI GACGC 3 cut(s) 45, 70, 85
Csp6I GTAC 4 cut(s) 154, 177, 758, 1209
CspCI CAANNNNNGTGG 2 cut(s) 1262, 1297
CviAII CATG 9 cut(s) 81, 341, 617, 640, 895, 1378, 1423, 1448, 1574
CviQI GTAC 4 cut(s) 154, 177, 758, 1209
DpnI GATC 6 cut(s) 188, 437, 947, 1002, 1351, 1537
DpnII GATC 6 cut(s) 186, 435, 945, 1000, 1349, 1535
DrdI GACNNNNNNGTC 1 cut(s) 1370
DriI GACNNNNNGTC 1 cut(s) 400
DseDI GACNNNNNNGTC 1 cut(s) 1370
EaeI YGGCCR 1 cut(s) 878
Eam1104I CTCTTC 7 cut(s) 365, 659, 771, 797, 849, 1573, 1872
Eam1105I GACNNNNNGTC 1 cut(s) 400
EarI CTCTTC 7 cut(s) 365, 659, 771, 797, 849, 1573, 1872
EciI GGCGGA 1 cut(s) 1181
Ecl136II GAGCTC 1 cut(s) 1271
Eco130I CCWWGG 2 cut(s) 1251, 1928
Eco24I GRGCYC 1 cut(s) 1273
Eco31I GGTCTC 1 cut(s) 1834
Eco47I GGWCC 2 cut(s) 1363, 1631
Eco53kI GAGCTC 1 cut(s) 1271
Eco57I CTGAAG 1 cut(s) 778
Eco81I CCTNAGG 1 cut(s) 587
Eco91I GGTNACC 1 cut(s) 260
EcoICRI GAGCTC 1 cut(s) 1271
EcoNI CCTNNNNNAGG 1 cut(s) 1181
EcoO65I GGTNACC 1 cut(s) 260
EcoRI GAATTC 1 cut(s) 1852
EcoRII CCWGG 3 cut(s) 51, 733, 1500
EcoT14I CCWWGG 2 cut(s) 1251, 1928
EcoT38I GRGCYC 1 cut(s) 1273
ErhI CCWWGG 2 cut(s) 1251, 1928
Esp3I CGTCTC 1 cut(s) 514
FaeI CATG 9 cut(s) 84, 344, 620, 643, 898, 1381, 1426, 1451, 1577
FalI AAGNNNNNCTT 2 cut(s) 1046, 1078
FaqI GGGAC 1 cut(s) 1376
FatI CATG 9 cut(s) 80, 340, 616, 639, 894, 1377, 1422, 1447, 1573
FauI CCCGC 1 cut(s) 813
FauNDI CATATG 1 cut(s) 1203
FbaI TGATCA 3 cut(s) 186, 435, 1000
FblI GTMKAC 2 cut(s) 59, 249
FokI GGATG 2 cut(s) 1279, 1339
FriOI GRGCYC 1 cut(s) 1273
FspBI CTAG 4 cut(s) 1188, 1647, 1713, 1724
GlaI GCGC 3 cut(s) 244, 408, 478
GsaI CCCAGC 1 cut(s) 386
GsuI CTGGAG 2 cut(s) 717, 1448
HaeII RGCGCY 2 cut(s) 246, 410
HaeIII GGCC 5 cut(s) 8, 170, 268, 444, 880
HapII CCGG 4 cut(s) 265, 1163, 1384, 1549
HgaI GACGC 3 cut(s) 45, 70, 85
HhaI GCGC 3 cut(s) 245, 409, 479
Hin1I GRCGYC 2 cut(s) 56, 62
Hin1II CATG 9 cut(s) 84, 344, 620, 643, 898, 1381, 1426, 1451, 1577
Hin6I GCGC 3 cut(s) 243, 407, 477
HinP1I GCGC 3 cut(s) 243, 407, 477
HincII GTYRAC 3 cut(s) 60, 250, 1375
HindII GTYRAC 3 cut(s) 60, 250, 1375
HindIII AAGCTT 2 cut(s) 12, 1060
HpaII CCGG 4 cut(s) 265, 1163, 1384, 1549
HphI GGTGA 5 cut(s) 9, 272, 488, 540, 782
Hpy166II GTNNAC 7 cut(s) 60, 250, 548, 1142, 1211, 1375, 1477
Hpy188I TCNGA 9 cut(s) 133, 143, 202, 1050, 1199, 1244, 1309, 1767, 1902
Hpy188III TCNNGA 7 cut(s) 576, 949, 1085, 1131, 1448, 1634, 1679
Hpy8I GTNNAC 7 cut(s) 60, 250, 548, 1142, 1211, 1375, 1477
Hpy99I CGWCG 6 cut(s) 61, 64, 101, 251, 254, 260
HpyAV CCTTC 3 cut(s) 550, 1177, 1345
HpyCH4III ACNGT 5 cut(s) 21, 260, 299, 750, 1044
HpyCH4IV ACGT 1 cut(s) 1839
HpyF10VI GCNNNNNNNGC 8 cut(s) 107, 167, 612, 706, 1109, 1163, 1235, 1423
HpySE526I ACGT 1 cut(s) 1839
Hsp92I GRCGYC 2 cut(s) 56, 62
Hsp92II CATG 9 cut(s) 84, 344, 620, 643, 898, 1381, 1426, 1451, 1577
HspAI GCGC 3 cut(s) 243, 407, 477
Ksp22I TGATCA 3 cut(s) 186, 435, 1000
Kzo9I GATC 6 cut(s) 186, 435, 945, 1000, 1349, 1535
LguI GCTCTTC 1 cut(s) 797
LmnI GCTCC 9 cut(s) 118, 133, 383, 492, 664, 914, 1422, 1503, 1551
Lsp1109I GCAGC 8 cut(s) 105, 336, 684, 947, 1141, 1213, 1428, 1918
LweI GCATC 5 cut(s) 945, 947, 1301, 1738, 1893
MaeI CTAG 4 cut(s) 1188, 1647, 1713, 1724
MaeII ACGT 1 cut(s) 1839
MaeIII GTNAC 5 cut(s) 260, 293, 494, 1255, 1322
MalI GATC 6 cut(s) 188, 437, 947, 1002, 1351, 1537
MbiI CCGCTC 1 cut(s) 113
MboI GATC 6 cut(s) 186, 435, 945, 1000, 1349, 1535
MflI RGATCY 1 cut(s) 1535
MhlI GDGCHC 2 cut(s) 1273, 1419
MlsI TGGCCA 1 cut(s) 880
MluCI AATT 5 cut(s) 607, 814, 1661, 1852, 1889
MluNI TGGCCA 1 cut(s) 880
MlyI GAGTC 8 cut(s) 86, 206, 642, 677, 1097, 1325, 1669, 1676
Mox20I TGGCCA 1 cut(s) 880
MroXI GAANNNNTTC 2 cut(s) 1061, 1080
MscI TGGCCA 1 cut(s) 880
MseI TTAA 1 cut(s) 830
MslI CAYNNNNRTG 1 cut(s) 1649
Msp20I TGGCCA 1 cut(s) 880
MspA1I CMGCKG 1 cut(s) 1154
MspI CCGG 4 cut(s) 265, 1163, 1384, 1549
MspR9I CCNGG 4 cut(s) 53, 735, 1502, 1549
MvaI CCWGG 3 cut(s) 53, 735, 1502
MvnI CGCG 1 cut(s) 577
MwoI GCNNNNNNNGC 8 cut(s) 107, 167, 612, 706, 1109, 1163, 1235, 1423
NciI CCSGG 1 cut(s) 1549
NdeI CATATG 1 cut(s) 1203
NdeII GATC 6 cut(s) 186, 435, 945, 1000, 1349, 1535
NheI GCTAGC 1 cut(s) 1723
NlaIII CATG 9 cut(s) 84, 344, 620, 643, 898, 1381, 1426, 1451, 1577
NlaIV GGNNCC 4 cut(s) 231, 488, 1149, 1364
NmeAIII GCCGAG 1 cut(s) 146
NmuCI GTSAC 2 cut(s) 260, 494
NruI TCGCGA 1 cut(s) 577
NspI RCATGY 2 cut(s) 898, 1426
PaeI GCATGC 1 cut(s) 1426
PagI TCATGA 1 cut(s) 1447
PaqCI CACCTGC 1 cut(s) 507
PciI ACATGT 1 cut(s) 894
PciSI GCTCTTC 1 cut(s) 797
PdmI GAANNNNTTC 2 cut(s) 1061, 1080
PfeI GAWTC 4 cut(s) 138, 566, 1081, 1194
PflMI CCANNNNNTGG 1 cut(s) 557
PleI GAGTC 8 cut(s) 85, 205, 642, 676, 1096, 1325, 1669, 1676
PpsI GAGTC 8 cut(s) 85, 205, 642, 676, 1096, 1325, 1669, 1676
PscI ACATGT 1 cut(s) 894
PsiI TTATAA 1 cut(s) 813
Psp124BI GAGCTC 1 cut(s) 1273
Psp6I CCWGG 3 cut(s) 51, 733, 1500
PspEI GGTNACC 1 cut(s) 260
PspFI CCCAGC 1 cut(s) 382
PspGI CCWGG 3 cut(s) 51, 733, 1500
PspN4I GGNNCC 4 cut(s) 231, 488, 1149, 1364
PspPI GGNCC 2 cut(s) 1363, 1631
PstI CTGCAG 1 cut(s) 176
PstNI CAGNNNCTG 3 cut(s) 941, 990, 1048
PsuI RGATCY 1 cut(s) 1535
PvuII CAGCTG 1 cut(s) 1154
RruI TCGCGA 1 cut(s) 577
RsaI GTAC 4 cut(s) 155, 178, 759, 1210
RsaNI GTAC 4 cut(s) 154, 177, 758, 1209
RseI CAYNNNNRTG 1 cut(s) 1649
SacI GAGCTC 1 cut(s) 1273
SalI GTCGAC 2 cut(s) 58, 248
SapI GCTCTTC 1 cut(s) 797
SaqAI TTAA 1 cut(s) 830
Sau3AI GATC 6 cut(s) 186, 435, 945, 1000, 1349, 1535
Sau96I GGNCC 2 cut(s) 1363, 1631
ScaI AGTACT 1 cut(s) 759
SchI GAGTC 8 cut(s) 86, 206, 642, 677, 1097, 1325, 1669, 1676
ScrFI CCNGG 4 cut(s) 53, 735, 1502, 1549
SduI GDGCHC 2 cut(s) 1273, 1419
SfaNI GCATC 5 cut(s) 945, 947, 1301, 1738, 1893
SfcI CTRYAG 2 cut(s) 172, 450
SgrDI CGTCGACG 2 cut(s) 58, 248
SinI GGWCC 2 cut(s) 1363, 1631
SmiMI CAYNNNNRTG 1 cut(s) 1649
SpeI ACTAGT 1 cut(s) 1646
SphI GCATGC 1 cut(s) 1426
Sse9I AATT 5 cut(s) 607, 814, 1661, 1852, 1889
SsiI CCGC 6 cut(s) 108, 111, 603, 820, 1166, 1420
SspMI CTAG 4 cut(s) 1188, 1647, 1713, 1724
SstI GAGCTC 1 cut(s) 1273
StyD4I CCNGG 4 cut(s) 51, 733, 1500, 1547
StyI CCWWGG 2 cut(s) 1251, 1928
TaaI ACNGT 5 cut(s) 21, 260, 299, 750, 1044
TaiI ACGT 1 cut(s) 1842
TaqI TCGA 6 cut(s) 59, 249, 948, 996, 1602, 1856
TasI AATT 5 cut(s) 607, 814, 1661, 1852, 1889
TatI WGTACW 1 cut(s) 757
TauI GCSGC 3 cut(s) 110, 113, 606
TfiI GAWTC 4 cut(s) 138, 566, 1081, 1194
Tru1I TTAA 1 cut(s) 830
Tru9I TTAA 1 cut(s) 830
TscAI CASTG 4 cut(s) 37, 336, 1119, 1518
TseFI GTSAC 2 cut(s) 260, 494
TseI GCWGC 8 cut(s) 93, 349, 697, 935, 1154, 1226, 1441, 1906
Tsp45I GTSAC 2 cut(s) 260, 494
TspDTI ATGAA 6 cut(s) 329, 379, 677, 790, 1113, 1394
TspGWI ACGGA 4 cut(s) 206, 496, 1029, 1904
TspRI CASTG 4 cut(s) 37, 336, 1119, 1518
Van91I CCANNNNNTGG 1 cut(s) 557
VpaK11BI GGWCC 2 cut(s) 1363, 1631
XagI CCTNNNNNAGG 1 cut(s) 1181
XapI RAATTY 2 cut(s) 1661, 1852
XceI RCATGY 2 cut(s) 898, 1426
XmiI GTMKAC 2 cut(s) 59, 249
XmnI GAANNNNTTC 2 cut(s) 1061, 1080
XspI CTAG 4 cut(s) 1188, 1647, 1713, 1724
ZrmI AGTACT 1 cut(s) 759
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.