RLG00000018693

Lipase (class 3)

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
33999253 .. 34005719
6467 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000018693

Sequence Viewer

Length: 1959 bp
ATGGAGGCCGAAGCTTCACTGTTTGAGAGCAGTGAGTTGGTGGCGAGTTTCCTGGCGTCGACGCCTTTGCTAAGCGAGTCATGGAGGCTGTGCAGCGTCGCCAACTCCGCCGCTCCATTGGGTTTCGTATCGGAGCGAATCGGAGATGTCGGGTACTTTGCTTTCTCGGCCTGCAGTACCCAAATGATCACGGAGGAGTCGGAATACTACTCCACTTGCAGAAACTTGGTGCCATTGGATAGCGCCGGCGCCGGCGACGGTGACTGGCATTTTTCGGTATTGACCAAAAGTAGTAACAGTAGTATCAATGGAGAAGAAGATGAGGGTGCAGTGATGGTTCATGCAGGGCTGCTCAATCTCTTCTTGTTTTTTCGTAGCTCCCAAGCTTTCAAAGACCAGATGTCGGCGCTGATAAATGGAAGCAAGTCCATTGTGATCACAGGCCATTCTATAGGAGGAACAACTGCCTCACTCTGCGCTCTTTGGCTCCTTTGTTACCTGCAATCCGTCTCTTCTACCCTTTCGGTGCTTTGCATTACCTTCGGTTCACCATTACTTGGGAACGAATTGCTTTCCCGAGCAATCCTTAGGGAAAGATGGGGTGGCAACTTTTGCCATGTGGTGTCCAAGTATGACATCATGCCAAGACTCCTCTTCGCTCCTTTAGAGTCCTGCACTCGCCAACTGCATTTCTTGCTGCAATACTGGCAGATGTCTATGTTGGCTTCTTCTCCAGGCAACTTTGGACAGTTTCCAGTACTTCAACTCGGTGAGGAAGAGAAAGCTCAGCTCTTCAGCTTCATATCACATTATAATTTGCTAGTGTCTTCAATAGCACAAGCAGAAGCCAGAGAAGAGAAAGCAAATAGTTTGTATTGGCCATTTGGGAACTACATGTTTTGCTCACAAGAGGGAGCTATTTGTGTGGAGAATGCAGCATCTGTGATCGAGATGATGCATTTGATGTTTATGACTGGTAATCCCAGTTGCTGTATCGATGATCATCTAAAATACGGACACTATGTTGGGAAGATATCTTCACAGTTTCTGAATAAGAAAAGCTTCTTGCAAGGGGAAGTGATTCCTGAGTCAAGCTATGAAGCAGGGGTTGCACTGGCATTGCAGTCATCAGGAATAAGTAAACAGGAACCAGCTGCCAGACAGGCGGAAGATTGCCTAAAGAAGGCTAGGGGAATGAGACATATGCGTACACGAAGCCTCAACGCTGCAAACTTAGCCATCAGATTATCCAAGGTTACACCTTACAGAGCTCAAATAGAGTGGTATATGGCATCCTGTGATAAGTCTGATGAGCAACTTGGTTACTATGACTCCTTCAAGCAACGGGGATCATCCAAAAGGGACCACAAAGTCAACATGAACCGGCTCTTGCTTGCTGGATTTTGGAATGATGTGCTCCGCATGCTGGAGAACAACGAGCTGCCTCATGATTTTCACAAGCGAGCAAAATGGGTAAACGCTTCCCACTTTTACAAGCTCCTGGTGGAGCCACTGGACATTGCAGAGTATTATAGATCTGGTATGCACCGGATCAAGGGGCATTACTTGAAGAATGGAAGAGAGAGGAGGTTTGAGATTTTTGACAGGTGGTGGAGAGAGAGACAGGTTGGTCAAGAAGAAAACACTAGTATGAGAAGCAAATTTGCAGGTTTGACTCAGGACTCTTGCTTCTGGGCAAGGGTTGAGGAAGCTGGAGAGTGGCTAGCTAATGTTAGAAGCGAGAGTGATGTAAGGAAGCTGCCTTTGCTGTGGGAAAATATCCATATCTTTGAAAGGTATGCAACCAGATTAGTTGACCGTAAGGACGTCTCCAAAGACGTTCTAGCAAAGAATTCAAGCTATTCTTTGTGGGTAGAAGAGTTGAGAGAATTGAAATCTCAGATGCAGCAAATCCATCCTCAGTTCCCAAGGTTTAGAGATGGTGAGTTATTTCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

653

Amino Acids

74.09

Weight (kDa)

6.44

Isoelectric Point (pI)

55.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipase_3 PF01764 106 - 219 1.3e-16 Lipase (class 3)
EDS1_EP PF18117 424 - 634 1.1e-71 Enhanced disease susceptibility 1 protein EP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011011)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 813
AasI GACNNNNNNGTC 2 cut(s) 1370, 1629
AatII GACGTC 1 cut(s) 1830
Acc36I ACCTGC 2 cut(s) 507, 1658
AccB1I GGYRCC 2 cut(s) 229, 248
AccB7I CCANNNNNTGG 1 cut(s) 557
AccBSI CCGCTC 1 cut(s) 113
AccI GTMKAC 1 cut(s) 59
AciI CCGC 4 cut(s) 108, 111, 1166, 1420
AclWI GGATC 2 cut(s) 1357, 1559
AcoI YGGCCR 1 cut(s) 878
AcsI RAATTY 2 cut(s) 1661, 1852
AcuI CTGAAG 1 cut(s) 778
AcyI GRCGYC 4 cut(s) 56, 62, 249, 1827
AfaI GTAC 4 cut(s) 155, 178, 759, 1210
AfiI CCNNNNNNNGG 5 cut(s) 403, 557, 1183, 1426, 1555
AflIII ACRYGT 1 cut(s) 894
AgsI TTSAA 8 cut(s) 391, 764, 831, 1339, 1570, 1793, 1857, 1894
AhdI GACNNNNNGTC 1 cut(s) 400
AhlI ACTAGT 1 cut(s) 1646
AjnI CCWGG 3 cut(s) 51, 733, 1500
Alw21I GWGCWC 2 cut(s) 1273, 1419
Alw26I GTCTC 4 cut(s) 514, 1192, 1615, 1834
AlwI GGATC 2 cut(s) 1357, 1559
AlwNI CAGNNNCTG 3 cut(s) 941, 990, 1048
Ama87I CYCGRG 1 cut(s) 576
AoxI GGCC 4 cut(s) 6, 168, 442, 878
ApeKI GCWGC 9 cut(s) 93, 349, 697, 935, 1154, 1226, 1441, 1759, 1906
ApoI RAATTY 2 cut(s) 1661, 1852
Asp700I GAANNNNTTC 2 cut(s) 1061, 1080
AspLEI GCGC 4 cut(s) 245, 251, 409, 479
AspS9I GGNCC 1 cut(s) 1363
AsuHPI GGTGA 4 cut(s) 272, 540, 782, 1955
AsuNHI GCTAGC 1 cut(s) 1723
AvaI CYCGRG 1 cut(s) 576
AvaII GGWCC 1 cut(s) 1363
AxyI CCTNAGG 1 cut(s) 587
BaeI ACNNNNGTAYC 2 cut(s) 286, 319
BalI TGGCCA 1 cut(s) 880
BanI GGYRCC 2 cut(s) 229, 248
BanII GRGCYC 1 cut(s) 1273
BbsI GAAGAC 1 cut(s) 819
Bbv12I GWGCWC 2 cut(s) 1273, 1419
BbvI GCAGC 9 cut(s) 105, 336, 684, 947, 1141, 1213, 1428, 1746, 1918
BccI CCATC 5 cut(s) 328, 591, 1247, 1923, 1934
BcgI CGANNNNNNTGC 4 cut(s) 49, 83, 523, 557
BciT130I CCWGG 3 cut(s) 53, 735, 1502
BclI TGATCA 3 cut(s) 186, 435, 1000
BcoDI GTCTC 4 cut(s) 514, 1192, 1615, 1834
BcuI ACTAGT 1 cut(s) 1646
BfaI CTAG 5 cut(s) 821, 1188, 1647, 1724, 1844
BfmI CTRYAG 2 cut(s) 172, 450
BfoI RGCGCY 3 cut(s) 246, 252, 410
BfuAI ACCTGC 2 cut(s) 507, 1658
BglI GCCNNNNNGGC 1 cut(s) 1163
BglII AGATCT 1 cut(s) 1535
BlpI GCTNAGC 2 cut(s) 71, 786
BmcAI AGTACT 1 cut(s) 759
Bme1390I CCNGG 3 cut(s) 53, 735, 1502
Bme18I GGWCC 1 cut(s) 1363
BmeRI GACNNNNNGTC 1 cut(s) 400
BmeT110I CYCGRG 1 cut(s) 576
BmgT120I GGNCC 1 cut(s) 1363
BmiI GGNNCC 6 cut(s) 231, 250, 488, 1149, 1364, 1509
BmrFI CCNGG 3 cut(s) 53, 735, 1502
BmrI ACTGGG 1 cut(s) 978
BmsI GCATC 4 cut(s) 945, 947, 1301, 1893
BmtI GCTAGC 1 cut(s) 1727
BmuI ACTGGG 1 cut(s) 978
BpiI GAAGAC 1 cut(s) 819
BpmI CTGGAG 3 cut(s) 717, 1448, 1734
Bpu1102I GCTNAGC 2 cut(s) 71, 786
Bsa29I ATCGAT 1 cut(s) 996
BsaBI GATNNNNATC 1 cut(s) 1002
BsaHI GRCGYC 4 cut(s) 56, 62, 249, 1827
BsaJI CCNNGG 2 cut(s) 1251, 1928
BsaWI WCCGGW 1 cut(s) 1548
BsaXI ACNNNNNCTCC 2 cut(s) 1316, 1346
Bsc4I CCNNNNNNNGG 5 cut(s) 403, 557, 1183, 1426, 1555
Bse118I RCCGGY 3 cut(s) 245, 251, 1383
Bse1I ACTGG 7 cut(s) 269, 710, 755, 979, 984, 1119, 1518
Bse21I CCTNAGG 1 cut(s) 587
Bse3DI GCAATG 2 cut(s) 1118, 1518
Bse8I GATNNNNATC 1 cut(s) 1002
BseBI CCWGG 3 cut(s) 53, 735, 1502
BseCI ATCGAT 1 cut(s) 996
BseDI CCNNGG 2 cut(s) 1251, 1928
BseGI GGATG 3 cut(s) 1292, 1352, 1915
BseJI GATNNNNATC 1 cut(s) 1002
BseLI CCNNNNNNNGG 5 cut(s) 403, 557, 1183, 1426, 1555
BseMI GCAATG 2 cut(s) 1118, 1518
BseMII CTCAG 5 cut(s) 800, 1077, 1691, 1913, 1934
BseNI ACTGG 7 cut(s) 269, 710, 755, 979, 984, 1119, 1518
BseRI GAGGAG 3 cut(s) 209, 641, 1600
BseXI GCAGC 9 cut(s) 105, 336, 684, 947, 1141, 1213, 1428, 1746, 1918
BsgI GTGCAG 3 cut(s) 112, 348, 658
BshFI GGCC 4 cut(s) 8, 170, 444, 880
BshNI GGYRCC 2 cut(s) 229, 248
BshVI ATCGAT 1 cut(s) 996
BsiHKAI GWGCWC 2 cut(s) 1273, 1419
BsiHKCI CYCGRG 1 cut(s) 576
BsiSI CCGG 4 cut(s) 246, 252, 1384, 1549
BslFI GGGAC 1 cut(s) 1376
BslI CCNNNNNNNGG 5 cut(s) 403, 557, 1183, 1426, 1555
BsmAI GTCTC 4 cut(s) 514, 1192, 1615, 1834
BsmBI CGTCTC 2 cut(s) 514, 1834
BsmFI GGGAC 1 cut(s) 1376
BsmI GAATGC 1 cut(s) 937
BsnI GGCC 4 cut(s) 8, 170, 444, 880
BsoBI CYCGRG 1 cut(s) 576
Bsp1286I GDGCHC 2 cut(s) 1273, 1419
Bsp143I GATC 7 cut(s) 186, 435, 945, 1000, 1349, 1535, 1551
Bsp1720I GCTNAGC 2 cut(s) 71, 786
BspACI CCGC 4 cut(s) 108, 111, 1166, 1420
BspANI GGCC 4 cut(s) 8, 170, 444, 880
BspCNI CTCAG 5 cut(s) 799, 1078, 1690, 1912, 1933
BspDI ATCGAT 1 cut(s) 996
BspHI TCATGA 1 cut(s) 1447
BspLI GGNNCC 6 cut(s) 231, 250, 488, 1149, 1364, 1509
BspMAI CTGCAG 1 cut(s) 176
BspMI ACCTGC 2 cut(s) 507, 1658
BspOI GCTAGC 1 cut(s) 1727
BspPI GGATC 2 cut(s) 1357, 1559
BspQI GCTCTTC 1 cut(s) 797
BspT107I GGYRCC 2 cut(s) 229, 248
BsrBI CCGCTC 1 cut(s) 113
BsrDI GCAATG 2 cut(s) 1118, 1518
BsrFI RCCGGY 3 cut(s) 245, 251, 1383
BsrI ACTGG 7 cut(s) 269, 710, 755, 979, 984, 1119, 1518
BssAI RCCGGY 3 cut(s) 245, 251, 1383
BssECI CCNNGG 2 cut(s) 1251, 1928
BssMI GATC 7 cut(s) 186, 435, 945, 1000, 1349, 1535, 1551
BssNI GRCGYC 4 cut(s) 56, 62, 249, 1827
BssT1I CCWWGG 2 cut(s) 1251, 1928
Bst2UI CCWGG 3 cut(s) 53, 735, 1502
Bst4CI ACNGT 6 cut(s) 21, 260, 299, 750, 1044, 1820
Bst6I CTCTTC 8 cut(s) 365, 517, 659, 771, 797, 849, 1573, 1872
BstACI GRCGYC 4 cut(s) 56, 62, 249, 1827
BstAPI GCANNNNNTGC 3 cut(s) 612, 694, 1109
BstC8I GCNNGC 7 cut(s) 172, 247, 253, 1395, 1424, 1464, 1725
BstDEI CTNAG 8 cut(s) 71, 587, 786, 1086, 1234, 1677, 1899, 1920
BstENI CCTNNNNNAGG 1 cut(s) 1181
BstF5I GGATG 3 cut(s) 1292, 1352, 1915
BstH2I RGCGCY 3 cut(s) 246, 252, 410
BstHHI GCGC 4 cut(s) 245, 251, 409, 479
BstKTI GATC 7 cut(s) 189, 438, 948, 1003, 1352, 1538, 1554
BstMAI GTCTC 4 cut(s) 514, 1192, 1615, 1834
BstMBI GATC 7 cut(s) 186, 435, 945, 1000, 1349, 1535, 1551
BstNI CCWGG 3 cut(s) 53, 735, 1502
BstNSI RCATGY 2 cut(s) 898, 1426
BstSCI CCNGG 3 cut(s) 51, 733, 1500
BstSFI CTRYAG 2 cut(s) 172, 450
BstV1I GCAGC 9 cut(s) 105, 336, 684, 947, 1141, 1213, 1428, 1746, 1918
BstV2I GAAGAC 1 cut(s) 819
BstX2I RGATCY 1 cut(s) 1535
BstYI RGATCY 1 cut(s) 1535
Bsu15I ATCGAT 1 cut(s) 996
Bsu36I CCTNAGG 1 cut(s) 587
BsuRI GGCC 4 cut(s) 8, 170, 444, 880
BsuTUI ATCGAT 1 cut(s) 996
BtsCI GGATG 3 cut(s) 1292, 1352, 1915
BtsI GCAGTG 2 cut(s) 37, 336
BtsIMutI CAGTG 5 cut(s) 17, 37, 336, 1112, 1511
BveI ACCTGC 2 cut(s) 507, 1658
Cac8I GCNNGC 7 cut(s) 172, 247, 253, 1395, 1424, 1464, 1725
CaiI CAGNNNCTG 3 cut(s) 941, 990, 1048
CciI TCATGA 1 cut(s) 1447
CfoI GCGC 4 cut(s) 245, 251, 409, 479
Cfr10I RCCGGY 3 cut(s) 245, 251, 1383
Cfr13I GGNCC 1 cut(s) 1363
ClaI ATCGAT 1 cut(s) 996
CseI GACGC 3 cut(s) 45, 70, 85
Csp6I GTAC 4 cut(s) 154, 177, 758, 1209
CspCI CAANNNNNGTGG 2 cut(s) 1262, 1297
CviAII CATG 8 cut(s) 81, 341, 617, 640, 895, 1378, 1423, 1448
CviQI GTAC 4 cut(s) 154, 177, 758, 1209
DdeI CTNAG 8 cut(s) 71, 587, 786, 1086, 1234, 1677, 1899, 1920
DinI GGCGCC 1 cut(s) 250
DpnI GATC 7 cut(s) 188, 437, 947, 1002, 1351, 1537, 1553
DpnII GATC 7 cut(s) 186, 435, 945, 1000, 1349, 1535, 1551
DrdI GACNNNNNNGTC 2 cut(s) 1370, 1629
DriI GACNNNNNGTC 1 cut(s) 400
DseDI GACNNNNNNGTC 2 cut(s) 1370, 1629
EaeI YGGCCR 1 cut(s) 878
Eam1104I CTCTTC 8 cut(s) 365, 517, 659, 771, 797, 849, 1573, 1872
Eam1105I GACNNNNNGTC 1 cut(s) 400
EarI CTCTTC 8 cut(s) 365, 517, 659, 771, 797, 849, 1573, 1872
EciI GGCGGA 2 cut(s) 97, 1181
Ecl136II GAGCTC 1 cut(s) 1271
Eco130I CCWWGG 2 cut(s) 1251, 1928
Eco24I GRGCYC 1 cut(s) 1273
Eco32I GATATC 1 cut(s) 1035
Eco47I GGWCC 1 cut(s) 1363
Eco53kI GAGCTC 1 cut(s) 1271
Eco57I CTGAAG 1 cut(s) 778
Eco81I CCTNAGG 1 cut(s) 587
Eco88I CYCGRG 1 cut(s) 576
EcoICRI GAGCTC 1 cut(s) 1271
EcoNI CCTNNNNNAGG 1 cut(s) 1181
EcoRI GAATTC 1 cut(s) 1852
EcoRII CCWGG 3 cut(s) 51, 733, 1500
EcoRV GATATC 1 cut(s) 1035
EcoT14I CCWWGG 2 cut(s) 1251, 1928
EcoT22I ATGCAT 1 cut(s) 960
EcoT38I GRGCYC 1 cut(s) 1273
EgeI GGCGCC 1 cut(s) 250
EheI GGCGCC 1 cut(s) 250
ErhI CCWWGG 2 cut(s) 1251, 1928
Esp3I CGTCTC 2 cut(s) 514, 1834
FaeI CATG 8 cut(s) 84, 344, 620, 643, 898, 1381, 1426, 1451
FalI AAGNNNNNCTT 4 cut(s) 1046, 1078, 1849, 1881
FaqI GGGAC 1 cut(s) 1376
FatI CATG 8 cut(s) 80, 340, 616, 639, 894, 1377, 1422, 1447
FauNDI CATATG 1 cut(s) 1203
FbaI TGATCA 3 cut(s) 186, 435, 1000
FblI GTMKAC 1 cut(s) 59
FokI GGATG 3 cut(s) 1279, 1339, 1902
FriOI GRGCYC 1 cut(s) 1273
FspBI CTAG 5 cut(s) 821, 1188, 1647, 1724, 1844
GlaI GCGC 4 cut(s) 244, 250, 408, 478
GsuI CTGGAG 3 cut(s) 717, 1448, 1734
HaeII RGCGCY 3 cut(s) 246, 252, 410
HaeIII GGCC 4 cut(s) 8, 170, 444, 880
HapII CCGG 4 cut(s) 246, 252, 1384, 1549
HgaI GACGC 3 cut(s) 45, 70, 85
HhaI GCGC 4 cut(s) 245, 251, 409, 479
Hin1I GRCGYC 4 cut(s) 56, 62, 249, 1827
Hin1II CATG 8 cut(s) 84, 344, 620, 643, 898, 1381, 1426, 1451
Hin6I GCGC 4 cut(s) 243, 249, 407, 477
HinP1I GCGC 4 cut(s) 243, 249, 407, 477
HincII GTYRAC 3 cut(s) 60, 1375, 1816
HindII GTYRAC 3 cut(s) 60, 1375, 1816
HindIII AAGCTT 3 cut(s) 12, 384, 1060
HpaII CCGG 4 cut(s) 246, 252, 1384, 1549
HphI GGTGA 4 cut(s) 272, 540, 782, 1955
Hpy166II GTNNAC 7 cut(s) 60, 548, 1142, 1211, 1375, 1477, 1816
Hpy188I TCNGA 7 cut(s) 133, 143, 202, 1050, 1244, 1309, 1902
Hpy188III TCNNGA 7 cut(s) 576, 949, 1085, 1131, 1448, 1634, 1679
Hpy8I GTNNAC 7 cut(s) 60, 548, 1142, 1211, 1375, 1477, 1816
Hpy99I CGWCG 4 cut(s) 61, 64, 101, 260
HpyAV CCTTC 3 cut(s) 550, 1177, 1345
HpyCH4III ACNGT 6 cut(s) 21, 260, 299, 750, 1044, 1820
HpyCH4IV ACGT 2 cut(s) 1827, 1839
HpyF3I CTNAG 8 cut(s) 71, 587, 786, 1086, 1234, 1677, 1899, 1920
HpySE526I ACGT 2 cut(s) 1827, 1839
Hsp92I GRCGYC 4 cut(s) 56, 62, 249, 1827
Hsp92II CATG 8 cut(s) 84, 344, 620, 643, 898, 1381, 1426, 1451
HspAI GCGC 4 cut(s) 243, 249, 407, 477
KasI GGCGCC 1 cut(s) 248
KroI GCCGGC 2 cut(s) 245, 251
KroNI GCCGGC 2 cut(s) 247, 253
Ksp22I TGATCA 3 cut(s) 186, 435, 1000
Kzo9I GATC 7 cut(s) 186, 435, 945, 1000, 1349, 1535, 1551
LguI GCTCTTC 1 cut(s) 797
LmnI GCTCC 9 cut(s) 118, 133, 383, 492, 664, 914, 1422, 1503, 1507
Lsp1109I GCAGC 9 cut(s) 105, 336, 684, 947, 1141, 1213, 1428, 1746, 1918
LweI GCATC 4 cut(s) 945, 947, 1301, 1893
MaeI CTAG 5 cut(s) 821, 1188, 1647, 1724, 1844
MaeII ACGT 2 cut(s) 1827, 1839
MaeIII GTNAC 5 cut(s) 260, 293, 494, 1255, 1322
MalI GATC 7 cut(s) 188, 437, 947, 1002, 1351, 1537, 1553
MbiI CCGCTC 1 cut(s) 113
MboI GATC 7 cut(s) 186, 435, 945, 1000, 1349, 1535, 1551
MflI RGATCY 1 cut(s) 1535
MhlI GDGCHC 2 cut(s) 1273, 1419
MlsI TGGCCA 1 cut(s) 880
MluCI AATT 5 cut(s) 566, 814, 1661, 1852, 1889
MluNI TGGCCA 1 cut(s) 880
Mly113I GGCGCC 1 cut(s) 249
MlyI GAGTC 8 cut(s) 86, 206, 642, 677, 1097, 1325, 1669, 1676
MmeI TCCRAC 1 cut(s) 180
Mox20I TGGCCA 1 cut(s) 880
Mph1103I ATGCAT 1 cut(s) 960
MreI CGCCGGCG 2 cut(s) 245, 251
MroNI GCCGGC 2 cut(s) 245, 251
MroXI GAANNNNTTC 2 cut(s) 1061, 1080
MscI TGGCCA 1 cut(s) 880
MslI CAYNNNNRTG 1 cut(s) 1649
Msp20I TGGCCA 1 cut(s) 880
MspA1I CMGCKG 1 cut(s) 1154
MspI CCGG 4 cut(s) 246, 252, 1384, 1549
MspR9I CCNGG 3 cut(s) 53, 735, 1502
Mva1269I GAATGC 1 cut(s) 937
MvaI CCWGG 3 cut(s) 53, 735, 1502
NaeI GCCGGC 2 cut(s) 247, 253
NarI GGCGCC 1 cut(s) 249
NdeI CATATG 1 cut(s) 1203
NdeII GATC 7 cut(s) 186, 435, 945, 1000, 1349, 1535, 1551
NgoMIV GCCGGC 2 cut(s) 245, 251
NheI GCTAGC 1 cut(s) 1723
NlaIII CATG 8 cut(s) 84, 344, 620, 643, 898, 1381, 1426, 1451
NlaIV GGNNCC 6 cut(s) 231, 250, 488, 1149, 1364, 1509
NmeAIII GCCGAG 1 cut(s) 146
NmuCI GTSAC 1 cut(s) 260
NsiI ATGCAT 1 cut(s) 960
NspI RCATGY 2 cut(s) 898, 1426
PaeI GCATGC 1 cut(s) 1426
PagI TCATGA 1 cut(s) 1447
PciI ACATGT 1 cut(s) 894
PciSI GCTCTTC 1 cut(s) 797
PctI GAATGC 1 cut(s) 937
PdiI GCCGGC 2 cut(s) 247, 253
PdmI GAANNNNTTC 2 cut(s) 1061, 1080
PfeI GAWTC 2 cut(s) 138, 1081
PflMI CCANNNNNTGG 1 cut(s) 557
PleI GAGTC 8 cut(s) 85, 205, 642, 676, 1096, 1325, 1669, 1676
PluTI GGCGCC 1 cut(s) 252
PpsI GAGTC 8 cut(s) 85, 205, 642, 676, 1096, 1325, 1669, 1676
PscI ACATGT 1 cut(s) 894
PsiI TTATAA 1 cut(s) 813
Psp124BI GAGCTC 1 cut(s) 1273
Psp6I CCWGG 3 cut(s) 51, 733, 1500
PspGI CCWGG 3 cut(s) 51, 733, 1500
PspN4I GGNNCC 6 cut(s) 231, 250, 488, 1149, 1364, 1509
PspPI GGNCC 1 cut(s) 1363
PstI CTGCAG 1 cut(s) 176
PstNI CAGNNNCTG 3 cut(s) 941, 990, 1048
PsuI RGATCY 1 cut(s) 1535
PvuII CAGCTG 1 cut(s) 1154
RsaI GTAC 4 cut(s) 155, 178, 759, 1210
RsaNI GTAC 4 cut(s) 154, 177, 758, 1209
RseI CAYNNNNRTG 1 cut(s) 1649
SacI GAGCTC 1 cut(s) 1273
SalI GTCGAC 1 cut(s) 58
SapI GCTCTTC 1 cut(s) 797
Sau3AI GATC 7 cut(s) 186, 435, 945, 1000, 1349, 1535, 1551
Sau96I GGNCC 1 cut(s) 1363
ScaI AGTACT 1 cut(s) 759
SchI GAGTC 8 cut(s) 86, 206, 642, 677, 1097, 1325, 1669, 1676
ScrFI CCNGG 3 cut(s) 53, 735, 1502
SduI GDGCHC 2 cut(s) 1273, 1419
SfaNI GCATC 4 cut(s) 945, 947, 1301, 1893
SfcI CTRYAG 2 cut(s) 172, 450
SfoI GGCGCC 1 cut(s) 250
SgrAI CRCCGGYG 2 cut(s) 245, 251
SgrDI CGTCGACG 1 cut(s) 58
SinI GGWCC 1 cut(s) 1363
SmiMI CAYNNNNRTG 1 cut(s) 1649
SpeI ACTAGT 1 cut(s) 1646
SphI GCATGC 1 cut(s) 1426
Sse9I AATT 5 cut(s) 566, 814, 1661, 1852, 1889
SsiI CCGC 4 cut(s) 108, 111, 1166, 1420
SspDI GGCGCC 1 cut(s) 248
SspMI CTAG 5 cut(s) 821, 1188, 1647, 1724, 1844
SstI GAGCTC 1 cut(s) 1273
StyD4I CCNGG 3 cut(s) 51, 733, 1500
StyI CCWWGG 2 cut(s) 1251, 1928
TaaI ACNGT 6 cut(s) 21, 260, 299, 750, 1044, 1820
TaiI ACGT 2 cut(s) 1830, 1842
TaqI TCGA 3 cut(s) 59, 948, 996
TasI AATT 5 cut(s) 566, 814, 1661, 1852, 1889
TatI WGTACW 1 cut(s) 757
TauI GCSGC 1 cut(s) 113
TfiI GAWTC 2 cut(s) 138, 1081
TscAI CASTG 5 cut(s) 24, 37, 336, 1119, 1518
TseFI GTSAC 1 cut(s) 260
TseI GCWGC 9 cut(s) 93, 349, 697, 935, 1154, 1226, 1441, 1759, 1906
Tsp45I GTSAC 1 cut(s) 260
TspDTI ATGAA 4 cut(s) 329, 790, 1113, 1394
TspGWI ACGGA 3 cut(s) 206, 496, 1029
TspRI CASTG 5 cut(s) 24, 37, 336, 1119, 1518
Van91I CCANNNNNTGG 1 cut(s) 557
VpaK11BI GGWCC 1 cut(s) 1363
XagI CCTNNNNNAGG 1 cut(s) 1181
XapI RAATTY 2 cut(s) 1661, 1852
XceI RCATGY 2 cut(s) 898, 1426
XmiI GTMKAC 1 cut(s) 59
XmnI GAANNNNTTC 2 cut(s) 1061, 1080
XspI CTAG 5 cut(s) 821, 1188, 1647, 1724, 1844
ZraI GACGTC 1 cut(s) 1828
ZrmI AGTACT 1 cut(s) 759
Zsp2I ATGCAT 1 cut(s) 960
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.