Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0004216

Physical Location & Seq

Genomic Coordinates Forward (+)

18646820 .. 18653475

Gene Structure 6656 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g26800.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2322 bp

ATGGCGGGGTTCGACGCCTCCGAATCCCAGCAACAACAAACCCAGCTGTTCAGCGTAGGAACAGAAGTGGAGGTCCGGAGCGACGAGGAAGGGTTCAAAGGAGCGTGGTTCAGAGCTACCATTGTGCAGAGCCCAGCTCCGAGCTCAGCATCGAAGAAGAGGAAGAAGGCTGTGGTGGAGTACAAGACGTTGGTCACCGAAGACGGGTCTCAGCCACTGAAAGAGCACGTGGATTCCGCTTATATAAGGCCTCTGCCGCCTCACGTGGCTGACCAGGATCTCGAAGAAGGCCACATAGTCGACGCCGACTACCGTGACGGCTGGTGGACCGGAGTTATCCGCAAAGTTATCAAGAAGAACTCCAAATATAGTATCTTCTTTGAGAACCCGCCGGACGTTCTGGAATTCGATAGGGATCGTCTGCGTCTCCACGAGGATTGGGTTGCCGGCATTTGGGTCCGGCCCAACAAGCAGGAGATACTGGGTGCTTCAGATTCTCAACCAGAGGAAGAGCATTTGGTCAAACTACTGCCTGTACAGAATGGTTCCAACCATCCTGAGGTCAGTCAGGTGGCTGCACAACAGAAAACCACTGGTGCTGCAGGGGATAACCCTGAATCAACTAATTCAATGAAAAATCTTGAGGAGCAGTCAAGTTATACCCAAAGCATCAAGGATGTAGCGCCTAATGGTATTGCTACAGACTCACGTCCTTTAAAAAAGTTGAAGGACGACAAAGTGTCAGAGGCTACATCATCTGGTACACCACGGCAATTGAGGAAAACTCCCAATGATAAAGAAATTCTATCTGAGTTGGCCACTGGGAGCATGGAAAGCAGTGGAACTAGAGGATCAAGACGAAAGACAAAGCAACAGAAAGATGGTGAGCTAGATAACCAGATGCATTCTGTCAAAAGTAAAGGAAGGCGCTCACAGGCTCTAGTTGGAAGTTCCCAGGAAGCGGTAATATGTGCGCTTCCTAGTCAAGAGAAACATAAGGAAAGAGGTAAGGAAGATTACAGAGTTATTGGTTCTGCTGGAAATGTTGTTCAAAAGGAGGGCATAAGTAAAGAAGCTGAATTACCTCTCATTACTGGGTCGCAAGTCAATGGAAAGGAGGCAGCTCAATATCCATGTGAGATTCCCAACGAAGAGTTGCTGAAGCTCATGATAGATCAGAAGAAGAATGCAAACGGTCAAGCACAAGAAGAGAGCACGGTTATGTCAGCTGAACATGGCAGTGATTCAGTTTTGGATAACCTCCTCCGTAGCCTGGTTCTTTTTCCTGACATGGATTTTAAGCAGCAACCAACTGATTTAAGCAGCCACAAAAGAAAGAGGGGCAGACCTAGAAAGTTGGTGATCGTAAGCTCACAAGCCTCACAGGGAGTTAGGGAACTAAATGGATCAAATGTTGCTGACAAAATTGCTCTAGAAGATCAGAGACTTGACGAAGTTGCTTTGCATGTTCCCGAAGGTCAGGATGCTTCAGATTCGCAAGATGCATCTAGGAGAAATACAGCTGATGTTCCTGGAACAAGGGGTATACCAAATGAAGCTGCTAGGATCCGTGTTCAAGCGTCACAAAATACAGATGATGATGACCGACCTCTCTCCACATGGTTTGGTGGAATGCAGGGTGCAGCAAACATGGATGAATTAAGTAAGACTGTTGAACAAGTTAGGCATGCAAGAGATTCTACTCCAGTTGATTCAGTCAATGACTCTGTGCCGCCAGATGAGAACCAAATTATGCCATTTGTGAAGAGCTCCCCAATCTGGAAAGCAATCGAATCGTTTGACGTGTTCAGAATAATGCCACAAAATCCTCATTTTCGTCCCTTGGTTAAATGTAAAGAGGAATATCGTGAGGGGTTTGCTATTGGCAATATGGTGACCTTTTCCAGTTTGGTGGACAAGATATCGAGTCTGCATTTTGATGATCCTACACAGGTTTTTGATAGCATTTTGGAGAGTCTTCTTGACTTGGAAAAATATGGATTCAATGTTACCATTTTACGTGGGCGTGTGAATGAACTTTTGTCTATCAAACAAAGGCAAGTACAGTTTGAGGGCAAATCAAAAGATGCAGAAAGTAAGATAGTGAAGCAAACTCATGAGAAATCAAAACTTGAAGTTGAGGCTGATAGTATCAAGAAAAGAATAACTGAGTTACAGGAGAAGCATGCATTGATCAAGGCAGCTATAGGGTCTAAAGAACGTGACATTGCTAGCTTGCAGTCGAGTGCTGATGCTATCAATGAGAGCATTAAGAATGCACGTTCTGACTTTGAAAAGACAACTTTGCTCCCTTTGAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046983

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Agenet DUF724

Protein Analysis

774

Amino Acids

85.93

Weight (kDa)

5.76

Isoelectric Point (pI)

46.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Agenet	PF05641	20 - 87	7.9e-20	Agenet domain
DUF724	PF05266	607 - 790	1e-62	Protein of unknown function (DUF724)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004216)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g26800 FvH4_1g26800 FvH4_1g26800 FvH4_1g26800
malus_domestica	MD09G1286400.v1.1 MD17G1278800.v1.1
prunus_persica	Prupe.3G007100_v2.0.a1 Prupe.3G007100_v2.0.a1 Prupe.3G007100_v2.0.a1 Prupe.3G007100_v2.0.a1 Prupe.3G007100_v2.0.a1 Prupe.3G007100_v2.0.a1 Prupe.3G007100_v2.0.a1 Prupe.3G007100_v2.0.a1
pyrus_communis	pycom09g19350 pycom17g27640
rosa_chinensis	RchiOBHm_Chr3g0487021
rosa_laevigata	RLG00000023038
rosa_multiflora	Rmu_co8314393.1_g000001 Rmu_sc0002834.1_g000013 Rmu_sc0005856.1_g000019 Rmu_sc0012853.1_g000001
rosa_roxburghii	Rroxscaffold_6G00395240
rosa_rugosa	Rorug03G0229700 Rorug03G0229800 Rorug03G0229900 Rorug03G0230000 Rorug03G0230100
rosa_samantha	Rh3AG278800 Rh3BG314700 Rh3CG313000 Rh3DG309600
rosa_wichuraiana	Rw3G024710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	300, 1546
AccIII	TCCGGA	1 cut(s)	75
AciI	CCGC	7 cut(s)	5, 237, 257, 340, 389, 962, 1733
AclWI	GGATC	7 cut(s)	285, 423, 859, 1414, 1561, 1574, 1937
AcoI	YGGCCR	1 cut(s)	816
AcsI	RAATTY	2 cut(s)	404, 801
AcuI	CTGAAG	3 cut(s)	474, 1181, 1473
AcvI	CACGTG	2 cut(s)	229, 265
AcyI	GRCGYC	2 cut(s)	15, 303
AfaI	GTAC	4 cut(s)	182, 537, 763, 2064
AfiI	CCNNNNNNNGG	6 cut(s)	204, 453, 559, 961, 1273, 1779
AflIII	ACRYGT	1 cut(s)	1803
AgsI	TTSAA	9 cut(s)	97, 630, 727, 1052, 1577, 1676, 2005, 2135, 2294
AhdI	GACNNNNNGTC	1 cut(s)	739
AjiI	CACGTC	2 cut(s)	710, 1804
AjnI	CCWGG	4 cut(s)	273, 954, 1272, 1531
AloI	GAACNNNNNNTCC	2 cut(s)	1032, 1064
Alw21I	GWGCWC	4 cut(s)	146, 228, 1217, 1772
Alw26I	GTCTC	3 cut(s)	213, 431, 1438
AlwI	GGATC	7 cut(s)	285, 423, 859, 1414, 1561, 1574, 1937
AlwNI	CAGNNNCTG	1 cut(s)	217
Aor13HI	TCCGGA	1 cut(s)	75
AoxI	GGCC	4 cut(s)	248, 289, 461, 816
ApeKI	GCWGC	8 cut(s)	575, 599, 1121, 1303, 1323, 1559, 1643, 2201
ApoI	RAATTY	2 cut(s)	404, 801
AspLEI	GCGC	3 cut(s)	685, 930, 976
AspS9I	GGNCC	4 cut(s)	73, 327, 457, 462
AsuHPI	GGTGA	4 cut(s)	187, 896, 1372, 1906
AsuNHI	GCTAGC	1 cut(s)	2231
AvaII	GGWCC	3 cut(s)	73, 327, 457
AxyI	CCTNAGG	1 cut(s)	558
BalI	TGGCCA	1 cut(s)	818
BamHI	GGATCC	1 cut(s)	1566
BanII	GRGCYC	3 cut(s)	134, 146, 1772
BarI	GAAGNNNNNNTAC	2 cut(s)	1065, 1097
BauI	CACGAG	1 cut(s)	431
BbrPI	CACGTG	2 cut(s)	229, 265
BbsI	GAAGAC	2 cut(s)	207, 1970
Bbv12I	GWGCWC	4 cut(s)	146, 228, 1217, 1772
BbvI	GCAGC	8 cut(s)	562, 586, 1133, 1315, 1335, 1546, 1655, 2213
BccI	CCATC	2 cut(s)	561, 875
BceAI	ACGGC	2 cut(s)	334, 785
BcgI	CGANNNNNNTGC	2 cut(s)	1776, 1810
BciT130I	CCWGG	4 cut(s)	275, 956, 1274, 1533
BclI	TGATCA	1 cut(s)	2193
BcoDI	GTCTC	3 cut(s)	213, 431, 1438
BfaI	CTAG	9 cut(s)	846, 890, 941, 981, 1350, 1433, 1509, 1563, 2232
BfmI	CTRYAG	3 cut(s)	600, 699, 2205
BfoI	RGCGCY	2 cut(s)	686, 931
BlpI	GCTNAGC	1 cut(s)	145
Bme1390I	CCNGG	4 cut(s)	275, 956, 1274, 1533
Bme18I	GGWCC	3 cut(s)	73, 327, 457
BmeRI	GACNNNNNGTC	1 cut(s)	739
BmgBI	CACGTC	2 cut(s)	710, 1804
BmgT120I	GGNCC	4 cut(s)	73, 327, 457, 462
BmiI	GGNNCC	3 cut(s)	458, 547, 1568
BmrFI	CCNGG	4 cut(s)	275, 956, 1274, 1533
BmrI	ACTGGG	3 cut(s)	491, 831, 1104
BmsI	GCATC	8 cut(s)	158, 678, 891, 1474, 1492, 1514, 2077, 2242
BmtI	GCTAGC	1 cut(s)	2235
BmuI	ACTGGG	3 cut(s)	491, 831, 1104
BoxI	GACNNNNGTC	2 cut(s)	191, 708
BpiI	GAAGAC	2 cut(s)	207, 1970
BplI	GAGNNNNNCTC	4 cut(s)	121, 153, 769, 801
BpmI	CTGGAG	1 cut(s)	1689
Bpu1102I	GCTNAGC	1 cut(s)	145
BpuEI	CTTGAG	1 cut(s)	662
BsaAI	YACGTR	3 cut(s)	229, 265, 2021
BsaBI	GATNNNNATC	1 cut(s)	414
BsaHI	GRCGYC	2 cut(s)	15, 303
BsaI	GGTCTC	1 cut(s)	213
BsaJI	CCNNGG	3 cut(s)	767, 954, 1842
BsaWI	WCCGGW	2 cut(s)	75, 329
Bsc4I	CCNNNNNNNGG	6 cut(s)	204, 453, 559, 961, 1273, 1779
Bse118I	RCCGGY	1 cut(s)	446
Bse1I	ACTGG	6 cut(s)	486, 598, 826, 1099, 1706, 1905
Bse21I	CCTNAGG	1 cut(s)	558
Bse3DI	GCAATG	1 cut(s)	2226
Bse8I	GATNNNNATC	1 cut(s)	414
BseAI	TCCGGA	1 cut(s)	75
BseBI	CCWGG	4 cut(s)	275, 956, 1274, 1533
BseDI	CCNNGG	3 cut(s)	767, 954, 1842
BseGI	GGATG	4 cut(s)	553, 682, 1489, 1660
BseJI	GATNNNNATC	1 cut(s)	414
BseLI	CCNNNNNNNGG	6 cut(s)	204, 453, 559, 961, 1273, 1779
BseMI	GCAATG	1 cut(s)	2226
BseMII	CTCAG	5 cut(s)	159, 224, 549, 801, 2160
BseNI	ACTGG	6 cut(s)	486, 598, 826, 1099, 1706, 1905
BseRI	GAGGAG	2 cut(s)	659, 1253
BseXI	GCAGC	8 cut(s)	562, 586, 1133, 1315, 1335, 1546, 1655, 2213
BseYI	CCCAGC	3 cut(s)	27, 42, 133
BsgI	GTGCAG	3 cut(s)	146, 561, 1662
BshFI	GGCC	4 cut(s)	250, 291, 463, 818
BsiHKAI	GWGCWC	4 cut(s)	146, 228, 1217, 1772
BsiSI	CCGG	5 cut(s)	76, 330, 392, 447, 460
BslFI	GGGAC	1 cut(s)	1824
BslI	CCNNNNNNNGG	6 cut(s)	204, 453, 559, 961, 1273, 1779
BsmAI	GTCTC	3 cut(s)	213, 431, 1438
BsmBI	CGTCTC	1 cut(s)	431
BsmFI	GGGAC	1 cut(s)	1824
BsmI	GAATGC	4 cut(s)	904, 1192, 1638, 2281
BsnI	GGCC	4 cut(s)	250, 291, 463, 818
Bso31I	GGTCTC	1 cut(s)	213
Bsp1286I	GDGCHC	5 cut(s)	134, 146, 228, 1217, 1772
Bsp13I	TCCGGA	1 cut(s)	75
Bsp1407I	TGTACA	1 cut(s)	535
Bsp1720I	GCTNAGC	1 cut(s)	145
BspACI	CCGC	7 cut(s)	5, 237, 257, 340, 389, 962, 1733
BspANI	GGCC	4 cut(s)	250, 291, 463, 818
BspCNI	CTCAG	5 cut(s)	158, 223, 550, 802, 2161
BspEI	TCCGGA	1 cut(s)	75
BspHI	TCATGA	2 cut(s)	1167, 2116
BspLI	GGNNCC	3 cut(s)	458, 547, 1568
BspMAI	CTGCAG	1 cut(s)	604
BspOI	GCTAGC	1 cut(s)	2235
BspPI	GGATC	7 cut(s)	285, 423, 859, 1414, 1561, 1574, 1937
BspQI	GCTCTTC	2 cut(s)	504, 1760
BspTNI	GGTCTC	1 cut(s)	213
BsrDI	GCAATG	1 cut(s)	2226
BsrFI	RCCGGY	1 cut(s)	446
BsrGI	TGTACA	1 cut(s)	535
BsrI	ACTGG	6 cut(s)	486, 598, 826, 1099, 1706, 1905
BssAI	RCCGGY	1 cut(s)	446
BssECI	CCNNGG	3 cut(s)	767, 954, 1842
BssNAI	GTATAC	1 cut(s)	1547
BssNI	GRCGYC	2 cut(s)	15, 303
BssSI	CACGAG	1 cut(s)	431
BssT1I	CCWWGG	1 cut(s)	1842
Bst1107I	GTATAC	1 cut(s)	1547
Bst2BI	CACGAG	1 cut(s)	431
Bst2UI	CCWGG	4 cut(s)	275, 956, 1274, 1533
Bst4CI	ACNGT	5 cut(s)	314, 1196, 1219, 1672, 2067
Bst6I	CTCTTC	5 cut(s)	152, 504, 1146, 1203, 1760
BstACI	GRCGYC	2 cut(s)	15, 303
BstAUI	TGTACA	1 cut(s)	535
BstBAI	YACGTR	3 cut(s)	229, 265, 2021
BstC8I	GCNNGC	5 cut(s)	448, 1689, 2187, 2233, 2237
BstDEI	CTNAG	5 cut(s)	145, 210, 558, 810, 2169
BstDSI	CCRYGG	1 cut(s)	767
BstEII	GGTNACC	2 cut(s)	193, 1894
BstF5I	GGATG	4 cut(s)	553, 682, 1489, 1660
BstH2I	RGCGCY	2 cut(s)	686, 931
BstHHI	GCGC	3 cut(s)	685, 930, 976
BstMAI	GTCTC	3 cut(s)	213, 431, 1438
BstMWI	GCNNNNNNNGC	3 cut(s)	256, 469, 834
BstNI	CCWGG	4 cut(s)	275, 956, 1274, 1533
BstNSI	RCATGY	3 cut(s)	1469, 1691, 2189
BstPAI	GACNNNNGTC	2 cut(s)	191, 708
BstPI	GGTNACC	2 cut(s)	193, 1894
BstSCI	CCNGG	4 cut(s)	273, 954, 1272, 1531
BstSFI	CTRYAG	3 cut(s)	600, 699, 2205
BstV1I	GCAGC	8 cut(s)	562, 586, 1133, 1315, 1335, 1546, 1655, 2213
BstV2I	GAAGAC	2 cut(s)	207, 1970
BstX2I	RGATCY	2 cut(s)	277, 1566
BstXI	CCANNNNNNTGG	1 cut(s)	1912
BstYI	RGATCY	2 cut(s)	277, 1566
BstZ17I	GTATAC	1 cut(s)	1547
Bsu36I	CCTNAGG	1 cut(s)	558
BsuRI	GGCC	4 cut(s)	250, 291, 463, 818
BtgI	CCRYGG	1 cut(s)	767
BtrI	CACGTC	2 cut(s)	710, 1804
BtsCI	GGATG	4 cut(s)	553, 682, 1489, 1660
BtsI	GCAGTG	2 cut(s)	844, 1246
BtsIMutI	CAGTG	5 cut(s)	215, 591, 819, 844, 1246
Cac8I	GCNNGC	5 cut(s)	448, 1689, 2187, 2233, 2237
CaiI	CAGNNNCTG	1 cut(s)	217
CciI	TCATGA	2 cut(s)	1167, 2116
CfoI	GCGC	3 cut(s)	685, 930, 976
Cfr10I	RCCGGY	1 cut(s)	446
Cfr13I	GGNCC	4 cut(s)	73, 327, 457, 462
CseI	GACGC	4 cut(s)	23, 311, 413, 1569
Csp6I	GTAC	4 cut(s)	181, 536, 762, 2063
CspCI	CAANNNNNGTGG	6 cut(s)	419, 454, 756, 791, 1606, 1641
CviQI	GTAC	4 cut(s)	181, 536, 762, 2063
DdeI	CTNAG	5 cut(s)	145, 210, 558, 810, 2169
DraI	TTTAAA	1 cut(s)	717
DriI	GACNNNNNGTC	1 cut(s)	739
EaeI	YGGCCR	1 cut(s)	816
Eam1104I	CTCTTC	5 cut(s)	152, 504, 1146, 1203, 1760
Eam1105I	GACNNNNNGTC	1 cut(s)	739
EarI	CTCTTC	5 cut(s)	152, 504, 1146, 1203, 1760
Ecl136II	GAGCTC	2 cut(s)	144, 1770
Eco130I	CCWWGG	1 cut(s)	1842
Eco147I	AGGCCT	1 cut(s)	250
Eco24I	GRGCYC	3 cut(s)	134, 146, 1772
Eco31I	GGTCTC	1 cut(s)	213
Eco32I	GATATC	1 cut(s)	1923
Eco47I	GGWCC	3 cut(s)	73, 327, 457
Eco53kI	GAGCTC	2 cut(s)	144, 1770
Eco57I	CTGAAG	3 cut(s)	474, 1181, 1473
Eco72I	CACGTG	2 cut(s)	229, 265
Eco81I	CCTNAGG	1 cut(s)	558
Eco91I	GGTNACC	2 cut(s)	193, 1894
EcoICRI	GAGCTC	2 cut(s)	144, 1770
EcoO65I	GGTNACC	2 cut(s)	193, 1894
EcoRI	GAATTC	1 cut(s)	404
EcoRII	CCWGG	4 cut(s)	273, 954, 1272, 1531
EcoRV	GATATC	1 cut(s)	1923
EcoT14I	CCWWGG	1 cut(s)	1842
EcoT22I	ATGCAT	3 cut(s)	906, 1507, 2191
EcoT38I	GRGCYC	3 cut(s)	134, 146, 1772
ErhI	CCWWGG	1 cut(s)	1842
Esp3I	CGTCTC	1 cut(s)	431
FaqI	GGGAC	1 cut(s)	1824
FauI	CCCGC	1 cut(s)	396
FbaI	TGATCA	1 cut(s)	2193
FblI	GTMKAC	2 cut(s)	300, 1546
FokI	GGATG	4 cut(s)	540, 689, 1496, 1667
FriOI	GRGCYC	3 cut(s)	134, 146, 1772
FspBI	CTAG	9 cut(s)	846, 890, 941, 981, 1350, 1433, 1509, 1563, 2232
GlaI	GCGC	3 cut(s)	684, 929, 975
GsaI	CCCAGC	3 cut(s)	31, 46, 137
GsuI	CTGGAG	1 cut(s)	1689
HaeII	RGCGCY	2 cut(s)	686, 931
HaeIII	GGCC	4 cut(s)	250, 291, 463, 818
HapII	CCGG	5 cut(s)	76, 330, 392, 447, 460
HgaI	GACGC	4 cut(s)	23, 311, 413, 1569
HhaI	GCGC	3 cut(s)	685, 930, 976
Hin1I	GRCGYC	2 cut(s)	15, 303
Hin6I	GCGC	3 cut(s)	683, 928, 974
HinP1I	GCGC	3 cut(s)	683, 928, 974
HincII	GTYRAC	1 cut(s)	301
HindII	GTYRAC	1 cut(s)	301
HpaII	CCGG	5 cut(s)	76, 330, 392, 447, 460
HphI	GGTGA	4 cut(s)	187, 896, 1372, 1906
Hpy166II	GTNNAC	5 cut(s)	301, 327, 764, 1547, 1915
Hpy8I	GTNNAC	5 cut(s)	301, 327, 764, 1547, 1915
Hpy99I	CGWCG	3 cut(s)	17, 86, 305
HpyAV	CCTTC	6 cut(s)	83, 160, 281, 721, 918, 1469
HpyCH4III	ACNGT	5 cut(s)	314, 1196, 1219, 1672, 2067
HpyCH4IV	ACGT	9 cut(s)	188, 228, 264, 396, 709, 1803, 2020, 2221, 2281
HpyF10VI	GCNNNNNNNGC	3 cut(s)	256, 469, 834
HpyF3I	CTNAG	5 cut(s)	145, 210, 558, 810, 2169
HpySE526I	ACGT	9 cut(s)	188, 228, 264, 396, 709, 1803, 2020, 2221, 2281
Hsp92I	GRCGYC	2 cut(s)	15, 303
HspAI	GCGC	3 cut(s)	683, 928, 974
Kpn2I	TCCGGA	1 cut(s)	75
KroI	GCCGGC	1 cut(s)	446
KroNI	GCCGGC	1 cut(s)	448
Ksp22I	TGATCA	1 cut(s)	2193
LguI	GCTCTTC	2 cut(s)	504, 1760
LmnI	GCTCC	7 cut(s)	78, 101, 142, 646, 825, 1775, 2313
Lsp1109I	GCAGC	8 cut(s)	562, 586, 1133, 1315, 1335, 1546, 1655, 2213
LweI	GCATC	8 cut(s)	158, 678, 891, 1474, 1492, 1514, 2077, 2242
MaeI	CTAG	9 cut(s)	846, 890, 941, 981, 1350, 1433, 1509, 1563, 2232
MaeII	ACGT	9 cut(s)	188, 228, 264, 396, 709, 1803, 2020, 2221, 2281
MaeIII	GTNAC	7 cut(s)	193, 314, 1581, 1894, 2008, 2172, 2222
MfeI	CAATTG	1 cut(s)	773
MflI	RGATCY	2 cut(s)	277, 1566
MhlI	GDGCHC	5 cut(s)	134, 146, 228, 1217, 1772
MlsI	TGGCCA	1 cut(s)	818
MluCI	AATT	8 cut(s)	404, 625, 773, 801, 1079, 1425, 1658, 1749
MluNI	TGGCCA	1 cut(s)	818
MlyI	GAGTC	4 cut(s)	698, 1718, 1936, 1984
MmeI	TCCRAC	2 cut(s)	573, 925
Mox20I	TGGCCA	1 cut(s)	818
Mph1103I	ATGCAT	3 cut(s)	906, 1507, 2191
MroI	TCCGGA	1 cut(s)	75
MroNI	GCCGGC	1 cut(s)	446
MscI	TGGCCA	1 cut(s)	818
MseI	TTAA	6 cut(s)	716, 1299, 1319, 1661, 1848, 2271
MslI	CAYNNNNRTG	3 cut(s)	1220, 1239, 1938
Msp20I	TGGCCA	1 cut(s)	818
MspA1I	CMGCKG	3 cut(s)	46, 1229, 1523
MspI	CCGG	5 cut(s)	76, 330, 392, 447, 460
MspR9I	CCNGG	4 cut(s)	275, 956, 1274, 1533
MunI	CAATTG	1 cut(s)	773
Mva1269I	GAATGC	4 cut(s)	904, 1192, 1638, 2281
MvaI	CCWGG	4 cut(s)	275, 956, 1274, 1533
MwoI	GCNNNNNNNGC	3 cut(s)	256, 469, 834
NaeI	GCCGGC	1 cut(s)	448
NgoMIV	GCCGGC	1 cut(s)	446
NheI	GCTAGC	1 cut(s)	2231
NlaIV	GGNNCC	3 cut(s)	458, 547, 1568
NmuCI	GTSAC	5 cut(s)	193, 314, 1581, 1894, 2222
NsiI	ATGCAT	3 cut(s)	906, 1507, 2191
NspI	RCATGY	3 cut(s)	1469, 1691, 2189
PaeI	GCATGC	2 cut(s)	1691, 2189
PagI	TCATGA	2 cut(s)	1167, 2116
PceI	AGGCCT	1 cut(s)	250
PciSI	GCTCTTC	2 cut(s)	504, 1760
PcsI	WCGNNNNNNNCGW	1 cut(s)	18
PctI	GAATGC	4 cut(s)	904, 1192, 1638, 2281
PdiI	GCCGGC	1 cut(s)	448
PfoI	TCCNGGA	1 cut(s)	1531
PleI	GAGTC	4 cut(s)	698, 1718, 1935, 1983
PmaCI	CACGTG	2 cut(s)	229, 265
PmlI	CACGTG	2 cut(s)	229, 265
PpsI	GAGTC	4 cut(s)	698, 1718, 1935, 1983
Ppu21I	YACGTR	3 cut(s)	229, 265, 2021
PshAI	GACNNNNGTC	2 cut(s)	191, 708
Psp124BI	GAGCTC	2 cut(s)	146, 1772
Psp6I	CCWGG	4 cut(s)	273, 954, 1272, 1531
PspCI	CACGTG	2 cut(s)	229, 265
PspEI	GGTNACC	2 cut(s)	193, 1894
PspFI	CCCAGC	3 cut(s)	27, 42, 133
PspGI	CCWGG	4 cut(s)	273, 954, 1272, 1531
PspN4I	GGNNCC	3 cut(s)	458, 547, 1568
PspPI	GGNCC	4 cut(s)	73, 327, 457, 462
PstI	CTGCAG	1 cut(s)	604
PstNI	CAGNNNCTG	1 cut(s)	217
PsuI	RGATCY	2 cut(s)	277, 1566
PvuII	CAGCTG	3 cut(s)	46, 1229, 1523
RsaI	GTAC	4 cut(s)	182, 537, 763, 2064
RsaNI	GTAC	4 cut(s)	181, 536, 762, 2063
RseI	CAYNNNNRTG	3 cut(s)	1220, 1239, 1938
SacI	GAGCTC	2 cut(s)	146, 1772
SalI	GTCGAC	1 cut(s)	299
SapI	GCTCTTC	2 cut(s)	504, 1760
SaqAI	TTAA	6 cut(s)	716, 1299, 1319, 1661, 1848, 2271
Sau96I	GGNCC	4 cut(s)	73, 327, 457, 462
SchI	GAGTC	4 cut(s)	698, 1718, 1936, 1984
ScrFI	CCNGG	4 cut(s)	275, 956, 1274, 1533
SduI	GDGCHC	5 cut(s)	134, 146, 228, 1217, 1772
SfaNI	GCATC	8 cut(s)	158, 678, 891, 1474, 1492, 1514, 2077, 2242
SfcI	CTRYAG	3 cut(s)	600, 699, 2205
SinI	GGWCC	3 cut(s)	73, 327, 457
SmiMI	CAYNNNNRTG	3 cut(s)	1220, 1239, 1938
SmlI	CTYRAG	1 cut(s)	641
SmoI	CTYRAG	1 cut(s)	641
SphI	GCATGC	2 cut(s)	1691, 2189
Sse9I	AATT	8 cut(s)	404, 625, 773, 801, 1079, 1425, 1658, 1749
SseBI	AGGCCT	1 cut(s)	250
SsiI	CCGC	7 cut(s)	5, 237, 257, 340, 389, 962, 1733
SspMI	CTAG	9 cut(s)	846, 890, 941, 981, 1350, 1433, 1509, 1563, 2232
SstI	GAGCTC	2 cut(s)	146, 1772
StuI	AGGCCT	1 cut(s)	250
StyD4I	CCNGG	4 cut(s)	273, 954, 1272, 1531
StyI	CCWWGG	1 cut(s)	1842
TaaI	ACNGT	5 cut(s)	314, 1196, 1219, 1672, 2067
TaiI	ACGT	9 cut(s)	191, 231, 267, 399, 712, 1806, 2023, 2224, 2284
TaqI	TCGA	8 cut(s)	12, 152, 282, 300, 408, 1791, 1925, 2243
TaqII	GACCGA	1 cut(s)	1620
TasI	AATT	8 cut(s)	404, 625, 773, 801, 1079, 1425, 1658, 1749
TatI	WGTACW	3 cut(s)	180, 535, 2062
TauI	GCSGC	2 cut(s)	259, 1735
Tru1I	TTAA	6 cut(s)	716, 1299, 1319, 1661, 1848, 2271
Tru9I	TTAA	6 cut(s)	716, 1299, 1319, 1661, 1848, 2271
TscAI	CASTG	5 cut(s)	222, 598, 826, 844, 1246
TseFI	GTSAC	5 cut(s)	193, 314, 1581, 1894, 2222
TseI	GCWGC	8 cut(s)	575, 599, 1121, 1303, 1323, 1559, 1643, 2201
Tsp45I	GTSAC	5 cut(s)	193, 314, 1581, 1894, 2222
TspDTI	ATGAA	4 cut(s)	647, 1569, 1671, 2049
TspGWI	ACGGA	2 cut(s)	1256, 1559
TspRI	CASTG	5 cut(s)	222, 598, 826, 844, 1246
VpaK11BI	GGWCC	3 cut(s)	73, 327, 457
XapI	RAATTY	2 cut(s)	404, 801
XbaI	TCTAGA	1 cut(s)	1432
XceI	RCATGY	3 cut(s)	1469, 1691, 2189
XcmI	CCANNNNNNNNNTGG	1 cut(s)	826
XmiI	GTMKAC	2 cut(s)	300, 1546
XspI	CTAG	9 cut(s)	846, 890, 941, 981, 1350, 1433, 1509, 1563, 2232
Zsp2I	ATGCAT	3 cut(s)	906, 1507, 2191

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.