Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005856.1

Orthogroup ID

OG0004216

Physical Location & Seq

Genomic Coordinates Forward (+)

85759 .. 91667

Gene Structure 5909 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005856.1_g000019.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2415 bp

atggcggggttcgatggccccgaatcccagcaacaaaaccagctattcagcgtagggtcagaagtggaagtgaggagcgacgaggacgggttcaaaggagcgtggttcagagccaccattgttcagagcccagctgctagctcagcctcaaagaagaagaagagggcgctggtggagtacaagaccttggtcaccgaagacgggtctcagcagccactgaaagaacaggtcgattccgcttacataaggcctctgccgcctcacgtggctgaccaagatcttgaatacggccacatagtcgacgccgactacaaagacggatggtggaccggagttattgacaaggttatcaagaagaactccaaatataggatcttctttgagaacccgcccgactttctggaattcgagagagaccgtctgcgactccatcaggattgggttgccggcttttgggttcgccccgacaagcaggagatacatagtgcttcggattctcaacaagcggaagagcatcagccgcgactgctgcctgtccaaaatgattccaaccatcctgaggtggctgcacaaccgaaaacttcaggtgctgcaggggataaccctgaatcaactagtttaaggaagaatcttgtggagcagtcaagttttacctcaagcatcaaggatgtagcgcctaatggtggtgctacagactcgcgtcctttgaaaaagttaaaggacgacaaagtgccagaggctacattatctgttacaccacggcaattgaggaaaactccaaatgataaagaaatgctatgtgaattagccactgcgaccagggaaagcagtggaacaagaggatcgagacgagtaagaaaaccggctgttagtcagcagctttttcacgtagagagcttggttggtgaaaagaaagttaagacaaagcaagcgaaagatggtgagctagaaaaccaccgggcgcgcactgtcaaaagtgcgcgcactgtcaaaaatgaaggaaggcgttcgaaggctcaatttggaagtgcctgggaaccggttatatgtgcgcttcctagccaagagagacataaggaaaaaagtaaggaagggtatggagttattggttctactggaaatgttgttcaaaaggagggcataagtaaagaagctgaattgcctctcactatagagtcaaaggtcaatggaaagcaggattcatcagctgaatatccatgtcagattcccaacgaagatttgctgaagctcgtgagagatcagaagaagaatgcaaatggtccagcacaagaaaacagcacggttacgtcagctgaacatggcagtgatccagttttggataaccttctccgtagcctggttctttttccagacatggattttaagcagcaaccaactgaaggaagcagccacaaaagaaagaggggcagacctagaaaggttcctaaaaactttatcggaatcacacaagccgcacagggagtcagggaactaaatggatcaagaaatgttgctgacaaaagttctgtagaagatcagagacttgatgaagttgctttgcatttgcccggagggagagatgcttcagattcacaagatgcgtccaggagaaatacagctgatgttcctggaacaaggggcgtaccaaatgaagctgctaggacccgtgttcaagcatcggaaaatatagatgatgatgaccaacctctctccacatggtttggaggaatacagggtccagcaaacatggatgaattaagtaaaactgttgaacaagttgagcttgccagagattctactccagttgattcagtcagtgacactgtgccagatgagaaccaaattatgccatttgtgaagagctccccaatctggaaagcaattgaatcatttgacgtattcagaataatgccacaaaatccacattttcgtcccttggttaaatgtaaagaggaatatcgcgagggatttgctattggcaatatggtgaccttttccagtttggtggagaagatatcgagtctgcattttgatgaccctatacaggtttttgatagcattctggagagtctttttgacttggaaaaatatggattcaatgttaccgttttacgtgggcgtgtgaacgaacttttgtctatcaaacaaaggcatggacagtttgagggcgaatcaaaagacgtggaaagtaagatggtggagcaaactcaagagaaatcaaaacttgaagatgaagctgattgcatcgagaaaaaaataattgagttaaaggagaagcatgcatcgatccaggcagagataggggctaaagagcgtgacattgctagcttgcagttgagtgtggatgctatcaatgaaagcattaagaacacacgttctgattttgagaaggcagctttggtcccattgagatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046983

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Agenet DUF724

Protein Analysis

804

Amino Acids

89.63

Weight (kDa)

5.89

Isoelectric Point (pI)

43.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004216)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g26800 FvH4_1g26800 FvH4_1g26800 FvH4_1g26800
malus_domestica	MD09G1286400.v1.1 MD17G1278800.v1.1
prunus_persica	Prupe.3G007100_v2.0.a1 Prupe.3G007100_v2.0.a1 Prupe.3G007100_v2.0.a1 Prupe.3G007100_v2.0.a1 Prupe.3G007100_v2.0.a1 Prupe.3G007100_v2.0.a1 Prupe.3G007100_v2.0.a1 Prupe.3G007100_v2.0.a1
pyrus_communis	pycom09g19350 pycom17g27640
rosa_chinensis	RchiOBHm_Chr3g0487021
rosa_laevigata	RLG00000023038
rosa_multiflora	Rmu_co8314393.1_g000001 Rmu_sc0002834.1_g000013 Rmu_sc0005856.1_g000019 Rmu_sc0012853.1_g000001
rosa_roxburghii	Rroxscaffold_6G00395240
rosa_rugosa	Rorug03G0229700 Rorug03G0229800 Rorug03G0229900 Rorug03G0230000 Rorug03G0230100
rosa_samantha	Rh3AG278800 Rh3BG314700 Rh3CG313000 Rh3DG309600
rosa_wichuraiana	Rw3G024710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	300
AccII	CGCG	5 cut(s)	523, 700, 964, 982, 1962
AciI	CCGC	7 cut(s)	5, 237, 257, 389, 506, 521, 1473
AclWI	GGATC	5 cut(s)	380, 850, 1322, 1507, 2281
AcoI	YGGCCR	1 cut(s)	289
AcsI	RAATTY	1 cut(s)	404
AcuI	CTGAAG	4 cut(s)	567, 1265, 1419, 1569
AcvI	CACGTG	1 cut(s)	265
AcyI	GRCGYC	1 cut(s)	303
AfaI	GTAC	2 cut(s)	179, 1644
AfiI	CCNNNNNNNGG	9 cut(s)	201, 369, 453, 559, 683, 1357, 1400, 1872, 2044
AflIII	ACRYGT	1 cut(s)	2372
AgeI	ACCGGT	1 cut(s)	1039
AgsI	TTSAA	9 cut(s)	94, 284, 709, 1130, 1673, 1772, 1886, 2098, 2228
AhlI	ACTAGT	1 cut(s)	614
AjiI	CACGTC	1 cut(s)	2182
AjnI	CCWGG	6 cut(s)	818, 1031, 1356, 1604, 1627, 2289
AjuI	GAANNNNNNNTTGG	2 cut(s)	2381, 2413
AloI	GAACNNNNNNTCC	2 cut(s)	1110, 1142
Alw21I	GWGCWC	1 cut(s)	1865
Alw26I	GTCTC	5 cut(s)	210, 408, 841, 1063, 1534
AlwI	GGATC	5 cut(s)	380, 850, 1322, 1507, 2281
AlwNI	CAGNNNCTG	2 cut(s)	217, 590
AoxI	GGCC	3 cut(s)	16, 248, 289
ApoI	RAATTY	1 cut(s)	404
AsiGI	ACCGGT	1 cut(s)	1039
Asp700I	GAANNNNTTC	1 cut(s)	1006
AspLEI	GCGC	7 cut(s)	169, 676, 964, 966, 982, 984, 1054
AspS9I	GGNCC	6 cut(s)	17, 327, 1280, 1662, 1736, 2401
AsuC2I	CCSGG	2 cut(s)	959, 1569
AsuHPI	GGTGA	4 cut(s)	184, 917, 953, 1999
AsuII	TTCGAA	1 cut(s)	1010
AsuNHI	GCTAGC	2 cut(s)	137, 2324
AvaII	GGWCC	5 cut(s)	327, 1280, 1662, 1736, 2401
AxyI	CCTNAGG	1 cut(s)	558
BanII	GRGCYC	2 cut(s)	131, 1865
BauI	CACGAG	1 cut(s)	1250
BbrPI	CACGTG	1 cut(s)	265
BbsI	GAAGAC	1 cut(s)	204
Bbv12I	GWGCWC	1 cut(s)	1865
BccI	CCATC	6 cut(s)	8, 315, 438, 561, 932, 2188
BceAI	ACGGC	2 cut(s)	304, 776
BcgI	CGANNNNNNTGC	2 cut(s)	1952, 1986
BciT130I	CCWGG	6 cut(s)	820, 1033, 1358, 1606, 1629, 2291
BcnI	CCSGG	2 cut(s)	959, 1569
BcoDI	GTCTC	5 cut(s)	210, 408, 841, 1063, 1534
BcuI	ACTAGT	1 cut(s)	614
BfaI	CTAG	7 cut(s)	138, 615, 947, 1059, 1434, 1659, 2325
BfmI	CTRYAG	4 cut(s)	591, 690, 1170, 1527
BfoI	RGCGCY	2 cut(s)	170, 677
BglII	AGATCT	1 cut(s)	277
BlpI	GCTNAGC	1 cut(s)	142
Bme1390I	CCNGG	8 cut(s)	820, 959, 1033, 1358, 1569, 1606, 1629, 2291
Bme18I	GGWCC	5 cut(s)	327, 1280, 1662, 1736, 2401
BmgBI	CACGTC	1 cut(s)	2182
BmgT120I	GGNCC	6 cut(s)	17, 327, 1280, 1662, 1736, 2401
BmiI	GGNNCC	6 cut(s)	19, 1038, 1443, 1664, 1737, 2403
BmrFI	CCNGG	8 cut(s)	820, 959, 1033, 1358, 1569, 1606, 1629, 2291
BmsI	GCATC	8 cut(s)	523, 669, 1570, 1588, 1685, 2253, 2291, 2335
BmtI	GCTAGC	2 cut(s)	141, 2328
BoxI	GACNNNNGTC	2 cut(s)	188, 699
BpiI	GAAGAC	1 cut(s)	204
BplI	GAGNNNNNCTC	2 cut(s)	760, 792
BpmI	CTGGAG	2 cut(s)	1785, 2084
Bpu1102I	GCTNAGC	1 cut(s)	142
Bpu14I	TTCGAA	1 cut(s)	1010
BpuEI	CTTGAG	2 cut(s)	640, 2193
BpuMI	CCSGG	2 cut(s)	959, 1569
Bsa29I	ATCGAT	1 cut(s)	2285
BsaAI	YACGTR	3 cut(s)	265, 889, 2114
BsaHI	GRCGYC	1 cut(s)	303
BsaI	GGTCTC	2 cut(s)	210, 408
BsaJI	CCNNGG	5 cut(s)	186, 758, 819, 1032, 1935
BsaWI	WCCGGW	2 cut(s)	329, 1039
Bsc4I	CCNNNNNNNGG	9 cut(s)	201, 369, 453, 559, 683, 1357, 1400, 1872, 2044
Bse118I	RCCGGY	3 cut(s)	446, 862, 1039
Bse1I	ACTGG	4 cut(s)	1120, 1331, 1802, 1998
Bse21I	CCTNAGG	1 cut(s)	558
Bse3DI	GCAATG	1 cut(s)	2319
BseBI	CCWGG	6 cut(s)	820, 1033, 1358, 1606, 1629, 2291
BseCI	ATCGAT	1 cut(s)	2285
BseDI	CCNNGG	5 cut(s)	186, 758, 819, 1032, 1935
BseGI	GGATG	5 cut(s)	326, 553, 673, 1756, 2350
BseLI	CCNNNNNNNGG	9 cut(s)	201, 369, 453, 559, 683, 1357, 1400, 1872, 2044
BseMI	GCAATG	1 cut(s)	2319
BseMII	CTCAG	3 cut(s)	156, 221, 549
BseNI	ACTGG	4 cut(s)	1120, 1331, 1802, 1998
BsePI	GCGCGC	2 cut(s)	962, 980
BseRI	GAGGAG	1 cut(s)	88
BseYI	CCCAGC	2 cut(s)	27, 130
BsgI	GTGCAG	1 cut(s)	552
Bsh1236I	CGCG	5 cut(s)	523, 700, 964, 982, 1962
BshFI	GGCC	3 cut(s)	18, 250, 291
BshTI	ACCGGT	1 cut(s)	1039
BshVI	ATCGAT	1 cut(s)	2285
BsiHKAI	GWGCWC	1 cut(s)	1865
BsiSI	CCGG	6 cut(s)	330, 447, 863, 958, 1040, 1569
BslFI	GGGAC	2 cut(s)	1917, 2387
BslI	CCNNNNNNNGG	9 cut(s)	201, 369, 453, 559, 683, 1357, 1400, 1872, 2044
BsmAI	GTCTC	5 cut(s)	210, 408, 841, 1063, 1534
BsmBI	CGTCTC	1 cut(s)	841
BsmFI	GGGAC	2 cut(s)	1917, 2387
BsmI	GAATGC	2 cut(s)	1276, 2058
BsnI	GGCC	3 cut(s)	18, 250, 291
Bso31I	GGTCTC	2 cut(s)	210, 408
Bsp119I	TTCGAA	1 cut(s)	1010
Bsp1286I	GDGCHC	2 cut(s)	131, 1865
Bsp143I	GATC	8 cut(s)	277, 372, 842, 1258, 1327, 1499, 1534, 2286
Bsp1720I	GCTNAGC	1 cut(s)	142
Bsp68I	TCGCGA	1 cut(s)	1962
BspACI	CCGC	7 cut(s)	5, 237, 257, 389, 506, 521, 1473
BspANI	GGCC	3 cut(s)	18, 250, 291
BspCNI	CTCAG	3 cut(s)	155, 220, 550
BspDI	ATCGAT	1 cut(s)	2285
BspFNI	CGCG	5 cut(s)	523, 700, 964, 982, 1962
BspLI	GGNNCC	6 cut(s)	19, 1038, 1443, 1664, 1737, 2403
BspMAI	CTGCAG	1 cut(s)	595
BspOI	GCTAGC	2 cut(s)	141, 2328
BspPI	GGATC	5 cut(s)	380, 850, 1322, 1507, 2281
BspQI	GCTCTTC	2 cut(s)	504, 1853
BspT104I	TTCGAA	1 cut(s)	1010
BspTNI	GGTCTC	2 cut(s)	210, 408
BsrDI	GCAATG	1 cut(s)	2319
BsrFI	RCCGGY	3 cut(s)	446, 862, 1039
BsrI	ACTGG	4 cut(s)	1120, 1331, 1802, 1998
BssAI	RCCGGY	3 cut(s)	446, 862, 1039
BssECI	CCNNGG	5 cut(s)	186, 758, 819, 1032, 1935
BssHII	GCGCGC	2 cut(s)	962, 980
BssMI	GATC	8 cut(s)	277, 372, 842, 1258, 1327, 1499, 1534, 2286
BssNI	GRCGYC	1 cut(s)	303
BssSI	CACGAG	1 cut(s)	1250
BssT1I	CCWWGG	2 cut(s)	186, 1935
Bst2BI	CACGAG	1 cut(s)	1250
Bst2UI	CCWGG	6 cut(s)	820, 1033, 1358, 1606, 1629, 2291
Bst4CI	ACNGT	8 cut(s)	419, 970, 988, 1303, 1768, 1825, 2107, 2160
Bst6I	CTCTTC	3 cut(s)	155, 504, 1853
BstACI	GRCGYC	1 cut(s)	303
BstBAI	YACGTR	3 cut(s)	265, 889, 2114
BstBI	TTCGAA	1 cut(s)	1010
BstC8I	GCNNGC	9 cut(s)	139, 448, 930, 964, 982, 1785, 2280, 2326, 2330
BstDEI	CTNAG	3 cut(s)	142, 207, 558
BstDSI	CCRYGG	1 cut(s)	758
BstEII	GGTNACC	2 cut(s)	190, 1987
BstF5I	GGATG	5 cut(s)	326, 553, 673, 1756, 2350
BstFNI	CGCG	5 cut(s)	523, 700, 964, 982, 1962
BstH2I	RGCGCY	2 cut(s)	170, 677
BstHHI	GCGC	7 cut(s)	169, 676, 964, 966, 982, 984, 1054
BstKTI	GATC	8 cut(s)	280, 375, 845, 1261, 1330, 1502, 1537, 2289
BstMAI	GTCTC	5 cut(s)	210, 408, 841, 1063, 1534
BstMBI	GATC	8 cut(s)	277, 372, 842, 1258, 1327, 1499, 1534, 2286
BstMWI	GCNNNNNNNGC	5 cut(s)	143, 256, 520, 526, 529
BstNI	CCWGG	6 cut(s)	820, 1033, 1358, 1606, 1629, 2291
BstNSI	RCATGY	1 cut(s)	2282
BstPAI	GACNNNNGTC	2 cut(s)	188, 699
BstPI	GGTNACC	2 cut(s)	190, 1987
BstSCI	CCNGG	8 cut(s)	818, 957, 1031, 1356, 1567, 1604, 1627, 2289
BstSFI	CTRYAG	4 cut(s)	591, 690, 1170, 1527
BstUI	CGCG	5 cut(s)	523, 700, 964, 982, 1962
BstV2I	GAAGAC	1 cut(s)	204
BstX2I	RGATCY	2 cut(s)	277, 372
BstXI	CCANNNNNNTGG	1 cut(s)	2005
BstYI	RGATCY	2 cut(s)	277, 372
Bsu15I	ATCGAT	1 cut(s)	2285
Bsu36I	CCTNAGG	1 cut(s)	558
BsuRI	GGCC	3 cut(s)	18, 250, 291
BsuTUI	ATCGAT	1 cut(s)	2285
BtgI	CCRYGG	1 cut(s)	758
BtrI	CACGTC	1 cut(s)	2182
BtsCI	GGATG	5 cut(s)	326, 553, 673, 1756, 2350
BtsI	GCAGTG	3 cut(s)	810, 835, 1330
BtsIMutI	CAGTG	8 cut(s)	215, 810, 835, 966, 984, 1330, 1821, 1822
BtuMI	TCGCGA	1 cut(s)	1962
Cac8I	GCNNGC	9 cut(s)	139, 448, 930, 964, 982, 1785, 2280, 2326, 2330
CaiI	CAGNNNCTG	2 cut(s)	217, 590
CfoI	GCGC	7 cut(s)	169, 676, 964, 966, 982, 984, 1054
Cfr10I	RCCGGY	3 cut(s)	446, 862, 1039
Cfr13I	GGNCC	6 cut(s)	17, 327, 1280, 1662, 1736, 2401
ClaI	ATCGAT	1 cut(s)	2285
CseI	GACGC	3 cut(s)	311, 689, 1590
Csp6I	GTAC	2 cut(s)	178, 1643
CspAI	ACCGGT	1 cut(s)	1039
CspCI	CAANNNNNGTGG	6 cut(s)	747, 782, 1702, 1737, 2163, 2198
CviAII	CATG	7 cut(s)	1218, 1319, 1375, 1716, 1747, 2153, 2279
CviQI	GTAC	2 cut(s)	178, 1643
DdeI	CTNAG	3 cut(s)	142, 207, 558
DpnI	GATC	8 cut(s)	279, 374, 844, 1260, 1329, 1501, 1536, 2288
DpnII	GATC	8 cut(s)	277, 372, 842, 1258, 1327, 1499, 1534, 2286
EaeI	YGGCCR	1 cut(s)	289
Eam1104I	CTCTTC	3 cut(s)	155, 504, 1853
EarI	CTCTTC	3 cut(s)	155, 504, 1853
Ecl136II	GAGCTC	1 cut(s)	1863
Eco130I	CCWWGG	2 cut(s)	186, 1935
Eco147I	AGGCCT	1 cut(s)	250
Eco24I	GRGCYC	2 cut(s)	131, 1865
Eco31I	GGTCTC	2 cut(s)	210, 408
Eco32I	GATATC	1 cut(s)	2016
Eco47I	GGWCC	5 cut(s)	327, 1280, 1662, 1736, 2401
Eco53kI	GAGCTC	1 cut(s)	1863
Eco57I	CTGAAG	4 cut(s)	567, 1265, 1419, 1569
Eco72I	CACGTG	1 cut(s)	265
Eco81I	CCTNAGG	1 cut(s)	558
Eco91I	GGTNACC	2 cut(s)	190, 1987
EcoICRI	GAGCTC	1 cut(s)	1863
EcoO109I	RGGNCCY	1 cut(s)	1662
EcoO65I	GGTNACC	2 cut(s)	190, 1987
EcoRI	GAATTC	1 cut(s)	404
EcoRII	CCWGG	6 cut(s)	818, 1031, 1356, 1604, 1627, 2289
EcoRV	GATATC	1 cut(s)	2016
EcoT14I	CCWWGG	2 cut(s)	186, 1935
EcoT22I	ATGCAT	1 cut(s)	2284
EcoT38I	GRGCYC	2 cut(s)	131, 1865
ErhI	CCWWGG	2 cut(s)	186, 1935
Esp3I	CGTCTC	1 cut(s)	841
FaeI	CATG	7 cut(s)	1221, 1322, 1378, 1719, 1750, 2156, 2282
FalI	AAGNNNNNCTT	2 cut(s)	1767, 1799
FaqI	GGGAC	2 cut(s)	1917, 2387
FatI	CATG	7 cut(s)	1217, 1318, 1374, 1715, 1746, 2152, 2278
FauI	CCCGC	1 cut(s)	396
FblI	GTMKAC	1 cut(s)	300
FokI	GGATG	5 cut(s)	333, 540, 680, 1763, 2357
FriOI	GRGCYC	2 cut(s)	131, 1865
FspBI	CTAG	7 cut(s)	138, 615, 947, 1059, 1434, 1659, 2325
GlaI	GCGC	7 cut(s)	168, 675, 963, 965, 981, 983, 1053
GsaI	CCCAGC	2 cut(s)	31, 134
GsuI	CTGGAG	2 cut(s)	1785, 2084
HaeII	RGCGCY	2 cut(s)	170, 677
HaeIII	GGCC	3 cut(s)	18, 250, 291
HapII	CCGG	6 cut(s)	330, 447, 863, 958, 1040, 1569
HgaI	GACGC	3 cut(s)	311, 689, 1590
HhaI	GCGC	7 cut(s)	169, 676, 964, 966, 982, 984, 1054
Hin1I	GRCGYC	1 cut(s)	303
Hin1II	CATG	7 cut(s)	1221, 1322, 1378, 1719, 1750, 2156, 2282
Hin6I	GCGC	7 cut(s)	167, 674, 962, 964, 980, 982, 1052
HinP1I	GCGC	7 cut(s)	167, 674, 962, 964, 980, 982, 1052
HincII	GTYRAC	1 cut(s)	301
HindII	GTYRAC	1 cut(s)	301
HpaII	CCGG	6 cut(s)	330, 447, 863, 958, 1040, 1569
HphI	GGTGA	4 cut(s)	184, 917, 953, 1999
Hpy166II	GTNNAC	3 cut(s)	301, 327, 2125
Hpy8I	GTNNAC	3 cut(s)	301, 327, 2125
Hpy99I	CGWCG	2 cut(s)	83, 305
HpyAV	CCTTC	7 cut(s)	992, 996, 1006, 1085, 1355, 1394, 2383
HpyCH4III	ACNGT	8 cut(s)	419, 970, 988, 1303, 1768, 1825, 2107, 2160
HpyCH4IV	ACGT	7 cut(s)	264, 888, 1307, 1896, 2113, 2181, 2374
HpyCH4V	TGCA	8 cut(s)	569, 593, 1274, 1561, 2026, 2244, 2282, 2332
HpyF10VI	GCNNNNNNNGC	5 cut(s)	143, 256, 520, 526, 529
HpyF3I	CTNAG	3 cut(s)	142, 207, 558
HpySE526I	ACGT	7 cut(s)	264, 888, 1307, 1896, 2113, 2181, 2374
Hsp92I	GRCGYC	1 cut(s)	303
Hsp92II	CATG	7 cut(s)	1221, 1322, 1378, 1719, 1750, 2156, 2282
HspAI	GCGC	7 cut(s)	167, 674, 962, 964, 980, 982, 1052
KroI	GCCGGC	1 cut(s)	446
KroNI	GCCGGC	1 cut(s)	448
Kzo9I	GATC	8 cut(s)	277, 372, 842, 1258, 1327, 1499, 1534, 2286
LguI	GCTCTTC	2 cut(s)	504, 1853
LmnI	GCTCC	5 cut(s)	75, 98, 637, 1868, 2200
LweI	GCATC	8 cut(s)	523, 669, 1570, 1588, 1685, 2253, 2291, 2335
MaeI	CTAG	7 cut(s)	138, 615, 947, 1059, 1434, 1659, 2325
MaeII	ACGT	7 cut(s)	264, 888, 1307, 1896, 2113, 2181, 2374
MaeIII	GTNAC	7 cut(s)	190, 751, 1303, 1817, 1987, 2101, 2315
MalI	GATC	8 cut(s)	279, 374, 844, 1260, 1329, 1501, 1536, 2288
MboI	GATC	8 cut(s)	277, 372, 842, 1258, 1327, 1499, 1534, 2286
MfeI	CAATTG	2 cut(s)	764, 1881
MflI	RGATCY	2 cut(s)	277, 372
MhlI	GDGCHC	2 cut(s)	131, 1865
MluCI	AATT	9 cut(s)	404, 764, 803, 1019, 1157, 1754, 1842, 1881, 2259
MlyI	GAGTC	6 cut(s)	420, 689, 1184, 1491, 2029, 2077
MmeI	TCCRAC	1 cut(s)	573
Mph1103I	ATGCAT	1 cut(s)	2284
MroNI	GCCGGC	1 cut(s)	446
MroXI	GAANNNNTTC	1 cut(s)	1006
MseI	TTAA	8 cut(s)	620, 716, 918, 1383, 1757, 1941, 2267, 2364
MslI	CAYNNNNRTG	2 cut(s)	1323, 2031
MspA1I	CMGCKG	4 cut(s)	134, 1208, 1313, 1619
MspI	CCGG	6 cut(s)	330, 447, 863, 958, 1040, 1569
MspR9I	CCNGG	8 cut(s)	820, 959, 1033, 1358, 1569, 1606, 1629, 2291
MunI	CAATTG	2 cut(s)	764, 1881
Mva1269I	GAATGC	2 cut(s)	1276, 2058
MvaI	CCWGG	6 cut(s)	820, 1033, 1358, 1606, 1629, 2291
MvnI	CGCG	5 cut(s)	523, 700, 964, 982, 1962
MwoI	GCNNNNNNNGC	5 cut(s)	143, 256, 520, 526, 529
NaeI	GCCGGC	1 cut(s)	448
NciI	CCSGG	2 cut(s)	959, 1569
NdeII	GATC	8 cut(s)	277, 372, 842, 1258, 1327, 1499, 1534, 2286
NgoMIV	GCCGGC	1 cut(s)	446
NheI	GCTAGC	2 cut(s)	137, 2324
NlaIII	CATG	7 cut(s)	1221, 1322, 1378, 1719, 1750, 2156, 2282
NlaIV	GGNNCC	6 cut(s)	19, 1038, 1443, 1664, 1737, 2403
NmuCI	GTSAC	4 cut(s)	190, 1817, 1987, 2315
NruI	TCGCGA	1 cut(s)	1962
NsiI	ATGCAT	1 cut(s)	2284
NspI	RCATGY	1 cut(s)	2282
NspV	TTCGAA	1 cut(s)	1010
PaeI	GCATGC	1 cut(s)	2282
PauI	GCGCGC	2 cut(s)	962, 980
PceI	AGGCCT	1 cut(s)	250
PciSI	GCTCTTC	2 cut(s)	504, 1853
PcsI	WCGNNNNNNNCGW	1 cut(s)	18
PctI	GAATGC	2 cut(s)	1276, 2058
PdiI	GCCGGC	1 cut(s)	448
PdmI	GAANNNNTTC	1 cut(s)	1006
PfoI	TCCNGGA	2 cut(s)	1604, 1627
PinAI	ACCGGT	1 cut(s)	1039
PleI	GAGTC	6 cut(s)	420, 689, 1183, 1490, 2028, 2076
PmaCI	CACGTG	1 cut(s)	265
PmlI	CACGTG	1 cut(s)	265
PpsI	GAGTC	6 cut(s)	420, 689, 1183, 1490, 2028, 2076
Ppu21I	YACGTR	3 cut(s)	265, 889, 2114
PpuMI	RGGWCCY	1 cut(s)	1662
PshAI	GACNNNNGTC	2 cut(s)	188, 699
Psp124BI	GAGCTC	1 cut(s)	1865
Psp5II	RGGWCCY	1 cut(s)	1662
Psp6I	CCWGG	6 cut(s)	818, 1031, 1356, 1604, 1627, 2289
PspCI	CACGTG	1 cut(s)	265
PspEI	GGTNACC	2 cut(s)	190, 1987
PspFI	CCCAGC	2 cut(s)	27, 130
PspGI	CCWGG	6 cut(s)	818, 1031, 1356, 1604, 1627, 2289
PspN4I	GGNNCC	6 cut(s)	19, 1038, 1443, 1664, 1737, 2403
PspPI	GGNCC	6 cut(s)	17, 327, 1280, 1662, 1736, 2401
PspPPI	RGGWCCY	1 cut(s)	1662
PstI	CTGCAG	1 cut(s)	595
PstNI	CAGNNNCTG	2 cut(s)	217, 590
PsuI	RGATCY	2 cut(s)	277, 372
PteI	GCGCGC	2 cut(s)	962, 980
PvuII	CAGCTG	4 cut(s)	134, 1208, 1313, 1619
RruI	TCGCGA	1 cut(s)	1962
RsaI	GTAC	2 cut(s)	179, 1644
RsaNI	GTAC	2 cut(s)	178, 1643
RseI	CAYNNNNRTG	2 cut(s)	1323, 2031
SacI	GAGCTC	1 cut(s)	1865
SalI	GTCGAC	1 cut(s)	299
SapI	GCTCTTC	2 cut(s)	504, 1853
SaqAI	TTAA	8 cut(s)	620, 716, 918, 1383, 1757, 1941, 2267, 2364
Sau3AI	GATC	8 cut(s)	277, 372, 842, 1258, 1327, 1499, 1534, 2286
Sau96I	GGNCC	6 cut(s)	17, 327, 1280, 1662, 1736, 2401
SchI	GAGTC	6 cut(s)	420, 689, 1184, 1491, 2029, 2077
ScrFI	CCNGG	8 cut(s)	820, 959, 1033, 1358, 1569, 1606, 1629, 2291
SduI	GDGCHC	2 cut(s)	131, 1865
SfaNI	GCATC	8 cut(s)	523, 669, 1570, 1588, 1685, 2253, 2291, 2335
SfcI	CTRYAG	4 cut(s)	591, 690, 1170, 1527
SfuI	TTCGAA	1 cut(s)	1010
SinI	GGWCC	5 cut(s)	327, 1280, 1662, 1736, 2401
SmiMI	CAYNNNNRTG	2 cut(s)	1323, 2031
SmlI	CTYRAG	2 cut(s)	655, 2208
SmoI	CTYRAG	2 cut(s)	655, 2208
SpeI	ACTAGT	1 cut(s)	614
SphI	GCATGC	1 cut(s)	2282
Sse9I	AATT	9 cut(s)	404, 764, 803, 1019, 1157, 1754, 1842, 1881, 2259
SseBI	AGGCCT	1 cut(s)	250
SsiI	CCGC	7 cut(s)	5, 237, 257, 389, 506, 521, 1473
SspMI	CTAG	7 cut(s)	138, 615, 947, 1059, 1434, 1659, 2325
SstI	GAGCTC	1 cut(s)	1865
StuI	AGGCCT	1 cut(s)	250
StyD4I	CCNGG	8 cut(s)	818, 957, 1031, 1356, 1567, 1604, 1627, 2289
StyI	CCWWGG	2 cut(s)	186, 1935
TaaI	ACNGT	8 cut(s)	419, 970, 988, 1303, 1768, 1825, 2107, 2160
TaiI	ACGT	7 cut(s)	267, 891, 1310, 1899, 2116, 2184, 2377
TaqI	TCGA	9 cut(s)	12, 231, 300, 408, 845, 1010, 2018, 2247, 2285
TasI	AATT	9 cut(s)	404, 764, 803, 1019, 1157, 1754, 1842, 1881, 2259
TatI	WGTACW	1 cut(s)	177
TauI	GCSGC	3 cut(s)	259, 523, 1475
Tru1I	TTAA	8 cut(s)	620, 716, 918, 1383, 1757, 1941, 2267, 2364
Tru9I	TTAA	8 cut(s)	620, 716, 918, 1383, 1757, 1941, 2267, 2364
TscAI	CASTG	8 cut(s)	222, 817, 835, 973, 991, 1330, 1822, 1828
TseFI	GTSAC	4 cut(s)	190, 1817, 1987, 2315
Tsp45I	GTSAC	4 cut(s)	190, 1817, 1987, 2315
TspDTI	ATGAA	7 cut(s)	1011, 1191, 1563, 1665, 1767, 2247, 2370
TspGWI	ACGGA	2 cut(s)	333, 1340
TspRI	CASTG	8 cut(s)	222, 817, 835, 973, 991, 1330, 1822, 1828
VpaK11BI	GGWCC	5 cut(s)	327, 1280, 1662, 1736, 2401
XapI	RAATTY	1 cut(s)	404
XceI	RCATGY	1 cut(s)	2282
XmiI	GTMKAC	1 cut(s)	300
XmnI	GAANNNNTTC	1 cut(s)	1006
XspI	CTAG	7 cut(s)	138, 615, 947, 1059, 1434, 1659, 2325
Zsp2I	ATGCAT	1 cut(s)	2284

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.