FvH4_1g29791

Retrotransposon gag protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0016242
Physical Location & Seq
Forward (+)
23293621 .. 23295241
1621 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g29791.t1

Sequence Viewer

Length: 1461 bp
ATGTCTAGTGCTCCACTAACATCGGGTCAACCGTTAATTTTAGCTTCAAATAGCGCATCCACGACTGGTAGTGCGGCACATCAAGTCTCTGCAGTGACTACTAACGCCACGGTAGTGACAGCCGTTGGTAGTGCGGGACAACCGTATGTAGGTCAAGTGCAACAGTCACAAGCACGGACGACAACACAAGCAGAATTCCAGATTGGGGGCGGCTCGCGACCGTATGACCCCGTTACATATCCATGGGGCTTGCCACCAGGTTACACCCCTCCTTACAAGTCAGTTAATTTGCCACCAAGACCACCAAGCCTAGGATCTTTTCCTTGGGGGTTCTCGCCAAACTTCAACCCGTTGTATGAACCGACAGTTAGTACATCAGCCAGTACGGGACAACAATCCTGGGTCCAAGTATCGGGGATTAATCCATTGTTTGAACCACCGCCTACGAGTGCACCCGCAACCACTGTAGCCGATGTGTCATGGCAGGATCTTAATAATGACATCGATAACATTGATGATGGGATCGGTCGACTGGAACGGGAACACCAGCACCGCGTAGTAGCCACAGTGAAGGAAGTCGGGTTTTTTTCTTTTGAGCCGGGACAAGGCAGTCAGACGCAACAAATACCGATTTCCAATGGGCAGCAAGCTGCACCAGGGTCAAGTAGACCACTTGTGACAACCCCATCGCCTACCCAGCATCAACATTACCCACAACCACGACCAACTCAAACTTACCCCAACTGGGGGCACGATATGAATCAAAGCCATGGTTATCAGGCTCCGCAGCCACATAATCAATTCACTTACCCTCCACCCAATCAGAATTTTCATGCACATCAGTTTCACGGTCAACAACTATGGCCAACCCACCACCAAGGATATGGCCAACAAATTCCCCCACAACAAGGGGATCCTGGCAATCGATGGCAACCTATTCAGAATCAACAACCACTTCCACAACAGGGCCTTGGTGACCAAAATATACCTGTCCTTTTTAACGAAGTTCAAAATTTGGTAGAAGGCATCGTGGGTGATCTGCGTCAGCGGGTGGATAGACCTACTTATACAAAACCATATCCGCCATATGTTGACCAAGTTCCGTTGCCGCATCGATATCGTGTTCCGACTTTCCATTTGTTTTCTGGAGATGCGTATCAGTCCACAGTTGAGCACATTAGACGTTTCATTTCACAGTGTGGTGAGGCGAATAGCGAAGAAAACCGTATGCAGCTGTTTGTTAATTCTCTGACCGGTCTCGCTTTCTCGTGGTTTGTGAATCTTCCATCCAATTCGATCCAAACATGGAGAGATCTAGAGCGAGCATTTCATGATAGGTTTCACAAGGCAGAACAAAACATTCCTGTGGCCGAATTAGCTAAATCTTTCCAGACAAGCAATGAGACGGCTCAAGAATATATAGGATGGTTCAAGCTCCTTAGAACTAGATGCAAAGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Retrotrans_gag

Protein Analysis

487

Amino Acids

54.0

Weight (kDa)

6.4

Isoelectric Point (pI)

42.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotrans_gag PF03732 411 - 485 1.4e-10 Retrotransposon gag protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 609
AccI GTMKAC 2 cut(s) 529, 667
AccII CGCG 2 cut(s) 217, 555
AclWI GGATC 6 cut(s) 322, 495, 530, 908, 921, 1291
AcoI YGGCCR 3 cut(s) 863, 886, 1368
AcsI RAATTY 4 cut(s) 194, 826, 894, 1012
AdeI CACNNNGTG 1 cut(s) 1199
AfaI GTAC 2 cut(s) 373, 385
AgeI ACCGGT 1 cut(s) 1253
AgsI TTSAA 5 cut(s) 48, 346, 434, 1010, 1432
AjnI CCWGG 4 cut(s) 256, 398, 655, 916
AjuI GAANNNNNNNTTGG 2 cut(s) 186, 218
AleI CACNNNNGTG 1 cut(s) 113
AluBI AGCT 6 cut(s) 44, 650, 1234, 1379, 1435, 1457
AluI AGCT 6 cut(s) 44, 650, 1234, 1379, 1435, 1457
Alw21I GWGCWC 3 cut(s) 13, 454, 1176
Alw26I GTCTC 3 cut(s) 91, 1262, 1397
Alw44I GTGCAC 1 cut(s) 450
AlwI GGATC 6 cut(s) 322, 495, 530, 908, 921, 1291
AoxI GGCC 4 cut(s) 863, 886, 967, 1368
ApaLI GTGCAC 1 cut(s) 450
ApeKI GCWGC 4 cut(s) 643, 650, 787, 1231
ApoI RAATTY 4 cut(s) 194, 826, 894, 1012
ArsI GACNNNNNNTTYG 2 cut(s) 1120, 1152
AseI ATTAAT 1 cut(s) 420
AsiGI ACCGGT 1 cut(s) 1253
AspA2I CCTAGG 1 cut(s) 310
AspLEI GCGC 1 cut(s) 56
AspS9I GGNCC 2 cut(s) 403, 967
AsuC2I CCSGG 1 cut(s) 600
AsuHPI GGTGA 3 cut(s) 986, 1046, 1214
AvaII GGWCC 1 cut(s) 403
AvrII CCTAGG 1 cut(s) 310
BaeGI GKGCMC 2 cut(s) 454, 753
BalI TGGCCA 2 cut(s) 865, 888
BamHI GGATCC 1 cut(s) 913
BauI CACGAG 1 cut(s) 1267
Bbv12I GWGCWC 3 cut(s) 13, 454, 1176
BbvI GCAGC 4 cut(s) 637, 655, 799, 1243
BccI CCATC 5 cut(s) 512, 694, 921, 1294, 1419
BceAI ACGGC 2 cut(s) 107, 1422
BcgI CGANNNNNNTGC 2 cut(s) 1100, 1134
BciT130I CCWGG 4 cut(s) 258, 400, 657, 918
BcnI CCSGG 1 cut(s) 600
BcoDI GTCTC 3 cut(s) 91, 1262, 1397
BfaI CTAG 4 cut(s) 6, 311, 1316, 1446
BfmI CTRYAG 2 cut(s) 90, 465
BglII AGATCT 1 cut(s) 1312
BisI GCNGC 7 cut(s) 75, 211, 644, 651, 788, 1109, 1232
BlnI CCTAGG 1 cut(s) 310
BlsI GCNGC 7 cut(s) 76, 212, 645, 652, 789, 1110, 1233
Bme1390I CCNGG 5 cut(s) 258, 400, 600, 657, 918
Bme18I GGWCC 1 cut(s) 403
BmgT120I GGNCC 2 cut(s) 403, 967
BmiI GGNNCC 3 cut(s) 404, 783, 915
BmrFI CCNGG 5 cut(s) 258, 400, 600, 657, 918
BmrI ACTGGG 1 cut(s) 754
BmsI GCATC 6 cut(s) 65, 709, 1035, 1120, 1141, 1439
BmuI ACTGGG 1 cut(s) 754
BpmI CTGGAG 1 cut(s) 1167
BpuEI CTTGAG 1 cut(s) 1395
BpuMI CCSGG 1 cut(s) 600
Bsa29I ATCGAT 3 cut(s) 504, 925, 1114
BsaBI GATNNNNATC 2 cut(s) 759, 1155
BsaI GGTCTC 1 cut(s) 1262
BsaJI CCNNGG 9 cut(s) 108, 242, 310, 323, 399, 656, 769, 877, 970
BsaWI WCCGGW 1 cut(s) 1253
BsaXI ACNNNNNCTCC 2 cut(s) 796, 826
Bse118I RCCGGY 1 cut(s) 1253
Bse1I ACTGG 4 cut(s) 70, 381, 537, 749
Bse3DI GCAATG 1 cut(s) 1405
Bse8I GATNNNNATC 2 cut(s) 759, 1155
BseBI CCWGG 4 cut(s) 258, 400, 657, 918
BseCI ATCGAT 3 cut(s) 504, 925, 1114
BseDI CCNNGG 9 cut(s) 108, 242, 310, 323, 399, 656, 769, 877, 970
BseGI GGATG 3 cut(s) 56, 1286, 1430
BseJI GATNNNNATC 2 cut(s) 759, 1155
BseMI GCAATG 1 cut(s) 1405
BseNI ACTGG 4 cut(s) 70, 381, 537, 749
BseSI GKGCMC 2 cut(s) 454, 753
BseXI GCAGC 4 cut(s) 637, 655, 799, 1243
BseYI CCCAGC 1 cut(s) 696
BsgI GTGCAG 1 cut(s) 636
Bsh1236I CGCG 2 cut(s) 217, 555
Bsh1285I CGRYCG 2 cut(s) 221, 529
BshFI GGCC 4 cut(s) 865, 888, 969, 1370
BshTI ACCGGT 1 cut(s) 1253
BshVI ATCGAT 3 cut(s) 504, 925, 1114
BsiEI CGRYCG 2 cut(s) 221, 529
BsiHKAI GWGCWC 3 cut(s) 13, 454, 1176
BsiSI CCGG 2 cut(s) 599, 1254
BslFI GGGAC 3 cut(s) 150, 402, 615
BsmAI GTCTC 3 cut(s) 91, 1262, 1397
BsmBI CGTCTC 1 cut(s) 1397
BsmFI GGGAC 3 cut(s) 150, 402, 615
BsnI GGCC 4 cut(s) 865, 888, 969, 1370
Bso31I GGTCTC 1 cut(s) 1262
Bsp1286I GDGCHC 4 cut(s) 13, 454, 753, 1176
Bsp143I GATC 7 cut(s) 314, 487, 522, 913, 1036, 1296, 1312
Bsp19I CCATGG 2 cut(s) 242, 769
Bsp68I TCGCGA 1 cut(s) 217
BspANI GGCC 4 cut(s) 865, 888, 969, 1370
BspDI ATCGAT 3 cut(s) 504, 925, 1114
BspFNI CGCG 2 cut(s) 217, 555
BspHI TCATGA 1 cut(s) 1330
BspLI GGNNCC 3 cut(s) 404, 783, 915
BspMAI CTGCAG 1 cut(s) 94
BspPI GGATC 6 cut(s) 322, 495, 530, 908, 921, 1291
BspTNI GGTCTC 1 cut(s) 1262
BsrDI GCAATG 1 cut(s) 1405
BsrFI RCCGGY 1 cut(s) 1253
BsrI ACTGG 4 cut(s) 70, 381, 537, 749
BssAI RCCGGY 1 cut(s) 1253
BssECI CCNNGG 9 cut(s) 108, 242, 310, 323, 399, 656, 769, 877, 970
BssMI GATC 7 cut(s) 314, 487, 522, 913, 1036, 1296, 1312
BssSI CACGAG 1 cut(s) 1267
BssT1I CCWWGG 6 cut(s) 242, 310, 323, 769, 877, 970
Bst2BI CACGAG 1 cut(s) 1267
Bst2UI CCWGG 4 cut(s) 258, 400, 657, 918
BstC8I GCNNGC 4 cut(s) 215, 251, 648, 1323
BstDEI CTNAG 1 cut(s) 1439
BstDSI CCRYGG 3 cut(s) 108, 242, 769
BstEII GGTNACC 1 cut(s) 974
BstF5I GGATG 3 cut(s) 56, 1286, 1430
BstFNI CGCG 2 cut(s) 217, 555
BstHHI GCGC 1 cut(s) 56
BstKTI GATC 7 cut(s) 317, 490, 525, 916, 1039, 1299, 1315
BstMAI GTCTC 3 cut(s) 91, 1262, 1397
BstMBI GATC 7 cut(s) 314, 487, 522, 913, 1036, 1296, 1312
BstMCI CGRYCG 2 cut(s) 221, 529
BstMWI GCNNNNNNNGC 2 cut(s) 697, 1376
BstNI CCWGG 4 cut(s) 258, 400, 657, 918
BstPI GGTNACC 1 cut(s) 974
BstSCI CCNGG 5 cut(s) 256, 398, 598, 655, 916
BstSFI CTRYAG 2 cut(s) 90, 465
BstSLI GKGCMC 2 cut(s) 454, 753
BstUI CGCG 2 cut(s) 217, 555
BstV1I GCAGC 4 cut(s) 637, 655, 799, 1243
BstX2I RGATCY 4 cut(s) 314, 487, 913, 1312
BstXI CCANNNNNNTGG 1 cut(s) 884
BstYI RGATCY 4 cut(s) 314, 487, 913, 1312
Bsu15I ATCGAT 3 cut(s) 504, 925, 1114
BsuRI GGCC 4 cut(s) 865, 888, 969, 1370
BsuTUI ATCGAT 3 cut(s) 504, 925, 1114
BtgI CCRYGG 3 cut(s) 108, 242, 769
BtgZI GCGATG 1 cut(s) 672
BtsCI GGATG 3 cut(s) 56, 1286, 1430
BtsI GCAGTG 1 cut(s) 99
BtsIMutI CAGTG 4 cut(s) 99, 462, 573, 1202
BtuMI TCGCGA 1 cut(s) 217
Cac8I GCNNGC 4 cut(s) 215, 251, 648, 1323
CciI TCATGA 1 cut(s) 1330
CfoI GCGC 1 cut(s) 56
Cfr10I RCCGGY 1 cut(s) 1253
Cfr13I GGNCC 2 cut(s) 403, 967
ClaI ATCGAT 3 cut(s) 504, 925, 1114
CseI GACGC 2 cut(s) 625, 1031
CsiI ACCWGGT 1 cut(s) 256
Csp6I GTAC 2 cut(s) 372, 384
CspAI ACCGGT 1 cut(s) 1253
CviAII CATG 6 cut(s) 243, 480, 770, 833, 1305, 1331
CviQI GTAC 2 cut(s) 372, 384
DdeI CTNAG 1 cut(s) 1439
DpnI GATC 7 cut(s) 316, 489, 524, 915, 1038, 1298, 1314
DpnII GATC 7 cut(s) 314, 487, 522, 913, 1036, 1296, 1312
DraIII CACNNNGTG 1 cut(s) 1199
DrdI GACNNNNNNGTC 1 cut(s) 609
DseDI GACNNNNNNGTC 1 cut(s) 609
EaeI YGGCCR 3 cut(s) 863, 886, 1368
EciI GGCGGA 1 cut(s) 1071
Eco130I CCWWGG 6 cut(s) 242, 310, 323, 769, 877, 970
Eco31I GGTCTC 1 cut(s) 1262
Eco32I GATATC 1 cut(s) 1118
Eco47I GGWCC 1 cut(s) 403
Eco91I GGTNACC 1 cut(s) 974
EcoO109I RGGNCCY 1 cut(s) 967
EcoO65I GGTNACC 1 cut(s) 974
EcoRI GAATTC 1 cut(s) 194
EcoRII CCWGG 4 cut(s) 256, 398, 655, 916
EcoRV GATATC 1 cut(s) 1118
EcoT14I CCWWGG 6 cut(s) 242, 310, 323, 769, 877, 970
ErhI CCWWGG 6 cut(s) 242, 310, 323, 769, 877, 970
Esp3I CGTCTC 1 cut(s) 1397
FaeI CATG 6 cut(s) 246, 483, 773, 836, 1308, 1334
FaqI GGGAC 3 cut(s) 150, 402, 615
FatI CATG 6 cut(s) 242, 479, 769, 832, 1304, 1330
FauI CCCGC 3 cut(s) 127, 463, 1041
FauNDI CATATG 1 cut(s) 1087
FblI GTMKAC 2 cut(s) 529, 667
Fnu4HI GCNGC 7 cut(s) 75, 211, 644, 651, 788, 1109, 1232
FokI GGATG 3 cut(s) 43, 1273, 1437
Fsp4HI GCNGC 7 cut(s) 75, 211, 644, 651, 788, 1109, 1232
FspBI CTAG 4 cut(s) 6, 311, 1316, 1446
GlaI GCGC 1 cut(s) 55
GluI GCNGC 7 cut(s) 75, 211, 644, 651, 788, 1109, 1232
GsaI CCCAGC 1 cut(s) 700
GsuI CTGGAG 1 cut(s) 1167
HaeIII GGCC 4 cut(s) 865, 888, 969, 1370
HapII CCGG 2 cut(s) 599, 1254
HgaI GACGC 2 cut(s) 625, 1031
HhaI GCGC 1 cut(s) 56
Hin1II CATG 6 cut(s) 246, 483, 773, 836, 1308, 1334
Hin6I GCGC 1 cut(s) 54
HinP1I GCGC 1 cut(s) 54
HincII GTYRAC 4 cut(s) 29, 530, 854, 1093
HindII GTYRAC 4 cut(s) 29, 530, 854, 1093
HindIII AAGCTT 1 cut(s) 1455
HinfI GANTC 3 cut(s) 760, 943, 1279
HpaII CCGG 2 cut(s) 599, 1254
HphI GGTGA 3 cut(s) 986, 1046, 1214
Hpy166II GTNNAC 7 cut(s) 29, 452, 530, 668, 854, 1093, 1164
Hpy188I TCNGA 5 cut(s) 615, 825, 942, 1128, 1251
Hpy188III TCNNGA 7 cut(s) 199, 216, 1146, 1316, 1331, 1390, 1412
Hpy8I GTNNAC 7 cut(s) 29, 452, 530, 668, 854, 1093, 1164
HpyAV CCTTC 2 cut(s) 565, 1016
HpyCH4IV ACGT 1 cut(s) 1183
HpyCH4V TGCA 7 cut(s) 92, 160, 452, 653, 836, 1231, 1452
HpyF10VI GCNNNNNNNGC 2 cut(s) 697, 1376
HpyF3I CTNAG 1 cut(s) 1439
HpySE526I ACGT 1 cut(s) 1183
Hsp92II CATG 6 cut(s) 246, 483, 773, 836, 1308, 1334
HspAI GCGC 1 cut(s) 54
Kzo9I GATC 7 cut(s) 314, 487, 522, 913, 1036, 1296, 1312
LmnI GCTCC 3 cut(s) 16, 787, 1440
Lsp1109I GCAGC 4 cut(s) 637, 655, 799, 1243
LweI GCATC 6 cut(s) 65, 709, 1035, 1120, 1141, 1439
MabI ACCWGGT 1 cut(s) 256
MaeI CTAG 4 cut(s) 6, 311, 1316, 1446
MaeII ACGT 1 cut(s) 1183
MaeIII GTNAC 7 cut(s) 94, 115, 165, 232, 260, 676, 974
MalI GATC 7 cut(s) 316, 489, 524, 915, 1038, 1298, 1314
MboI GATC 7 cut(s) 314, 487, 522, 913, 1036, 1296, 1312
MboII GAAGA 2 cut(s) 1229, 1274
MflI RGATCY 4 cut(s) 314, 487, 913, 1312
MhlI GDGCHC 4 cut(s) 13, 454, 753, 1176
MlsI TGGCCA 2 cut(s) 865, 888
MluNI TGGCCA 2 cut(s) 865, 888
MmeI TCCRAC 1 cut(s) 1151
MnlI CCTC 3 cut(s) 279, 822, 1198
Mox20I TGGCCA 2 cut(s) 865, 888
MscI TGGCCA 2 cut(s) 865, 888
MseI TTAA 7 cut(s) 35, 285, 420, 492, 999, 1242, 1459
MslI CAYNNNNRTG 3 cut(s) 113, 241, 1364
Msp20I TGGCCA 2 cut(s) 865, 888
MspA1I CMGCKG 2 cut(s) 1048, 1234
MspI CCGG 2 cut(s) 599, 1254
MspR9I CCNGG 5 cut(s) 258, 400, 600, 657, 918
MvaI CCWGG 4 cut(s) 258, 400, 657, 918
MvnI CGCG 2 cut(s) 217, 555
MwoI GCNNNNNNNGC 2 cut(s) 697, 1376
NciI CCSGG 1 cut(s) 600
NcoI CCATGG 2 cut(s) 242, 769
NdeI CATATG 1 cut(s) 1087
NdeII GATC 7 cut(s) 314, 487, 522, 913, 1036, 1296, 1312
NlaIII CATG 6 cut(s) 246, 483, 773, 836, 1308, 1334
NlaIV GGNNCC 3 cut(s) 404, 783, 915
NmuCI GTSAC 5 cut(s) 94, 115, 165, 676, 974
NruI TCGCGA 1 cut(s) 217
OliI CACNNNNGTG 1 cut(s) 113
PagI TCATGA 1 cut(s) 1330
PcsI WCGNNNNNNNCGW 1 cut(s) 29
PfeI GAWTC 3 cut(s) 760, 943, 1279
PinAI ACCGGT 1 cut(s) 1253
PkrI GCNGC 7 cut(s) 76, 212, 645, 652, 789, 1110, 1233
PshBI ATTAAT 1 cut(s) 420
Psp6I CCWGG 4 cut(s) 256, 398, 655, 916
PspEI GGTNACC 1 cut(s) 974
PspFI CCCAGC 1 cut(s) 696
PspGI CCWGG 4 cut(s) 256, 398, 655, 916
PspN4I GGNNCC 3 cut(s) 404, 783, 915
PspPI GGNCC 2 cut(s) 403, 967
PstI CTGCAG 1 cut(s) 94
PsuI RGATCY 4 cut(s) 314, 487, 913, 1312
PvuII CAGCTG 1 cut(s) 1234
RruI TCGCGA 1 cut(s) 217
RsaI GTAC 2 cut(s) 373, 385
RsaNI GTAC 2 cut(s) 372, 384
RseI CAYNNNNRTG 3 cut(s) 113, 241, 1364
SalI GTCGAC 1 cut(s) 528
SaqAI TTAA 7 cut(s) 35, 285, 420, 492, 999, 1242, 1459
SatI GCNGC 7 cut(s) 75, 211, 644, 651, 788, 1109, 1232
Sau3AI GATC 7 cut(s) 314, 487, 522, 913, 1036, 1296, 1312
Sau96I GGNCC 2 cut(s) 403, 967
ScrFI CCNGG 5 cut(s) 258, 400, 600, 657, 918
SduI GDGCHC 4 cut(s) 13, 454, 753, 1176
SexAI ACCWGGT 1 cut(s) 256
SfaNI GCATC 6 cut(s) 65, 709, 1035, 1120, 1141, 1439
SfcI CTRYAG 2 cut(s) 90, 465
SinI GGWCC 1 cut(s) 403
SmiMI CAYNNNNRTG 3 cut(s) 113, 241, 1364
SmlI CTYRAG 1 cut(s) 1410
SmoI CTYRAG 1 cut(s) 1410
SspMI CTAG 4 cut(s) 6, 311, 1316, 1446
StyD4I CCNGG 5 cut(s) 256, 398, 598, 655, 916
StyI CCWWGG 6 cut(s) 242, 310, 323, 769, 877, 970
TaiI ACGT 1 cut(s) 1186
TaqI TCGA 5 cut(s) 504, 529, 925, 1114, 1295
TaqII GACCGA 1 cut(s) 515
TatI WGTACW 1 cut(s) 371
TauI GCSGC 3 cut(s) 77, 213, 1111
TfiI GAWTC 3 cut(s) 760, 943, 1279
Tru1I TTAA 7 cut(s) 35, 285, 420, 492, 999, 1242, 1459
Tru9I TTAA 7 cut(s) 35, 285, 420, 492, 999, 1242, 1459
TscAI CASTG 4 cut(s) 99, 469, 573, 1202
TseFI GTSAC 5 cut(s) 94, 115, 165, 676, 974
TseI GCWGC 4 cut(s) 643, 650, 787, 1231
Tsp45I GTSAC 5 cut(s) 94, 115, 165, 676, 974
TspDTI ATGAA 5 cut(s) 372, 773, 821, 1177, 1319
TspGWI ACGGA 2 cut(s) 190, 1092
TspRI CASTG 4 cut(s) 99, 469, 573, 1202
VneI GTGCAC 1 cut(s) 450
VpaK11BI GGWCC 1 cut(s) 403
VspI ATTAAT 1 cut(s) 420
XapI RAATTY 4 cut(s) 194, 826, 894, 1012
XbaI TCTAGA 1 cut(s) 1315
XcmI CCANNNNNNNNNTGG 2 cut(s) 881, 1142
XmaJI CCTAGG 1 cut(s) 310
XmiI GTMKAC 2 cut(s) 529, 667
XspI CTAG 4 cut(s) 6, 311, 1316, 1446
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.