Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0003778

Physical Location & Seq

Genomic Coordinates Reverse (-)

24006623 .. 24014749

Gene Structure 8127 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g30291.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2937 bp

ATGATTGGTGAGAGTTATAGATGGAGTGAGGAGGATTCTGATGATCTCCTTCCAAATGTGCTGGATGCCTTGAATGAGATCGCTTTTCACCCGAAATTCCTTTCTTCTCGTGTTGAGAAGGAAAGGCGGGCTATACTTTCAGAATTACAGATGATGAATACGATAGATTATCGTGTTGACTGCCAGTTGTTACAACATCTACACTCTGAAAACAAGCTAAGCAAAAGGTTCCCGATTGGATTAGAGGAGCAAATTAAGAAGTGGGATGTCGATAAAGTGCGGAAATTTCATGAGCGTTGGTACTTCCCTGCAAATGCAACCTTATACATTGTTGGGGATATTGAAAACATCTCAAAAACAGTTTACCAAATTGAGGCTGTCTTTGGACAAACTGGCCAAGAAAATGGGTCAGCACCTACTCCTAGTGCATTTGGTGCAATGGCTAGTTTCCTTGTCCCTAAGCTTTCAGTTGGCCTGACCGGAAATTTGTCTACTGAAAGATCATCTAATTCCAACGACCAAACAAAACTCCTTAAAAAGGAAAAGCACATTGTTCGTCCTCCTGTGAAGCATAATTGGTCACTGCCTGGAAGTAGTATGGATTTGAAGCCTCCTCAGATTTTTCAGCATGAATTGATTCAGAATTTCTCATTTAATATGTTCTGCAAGATTCCTGTGAACAAGGTTCGAACTTATGGTGACTTGCGCAATGTTCTAATGAAGAGAATCTTTCTTTCTGCTCTGCATTTTCGAATCAATACAAGATACAAGAGTTCAAATCCTCCATTTACTTCAATTGAATTGGATCATAGTGACTCTGGAAGGGAAGGATGCACAGTCACTACTCTTACTGTAACTGCTGAACCCAAGAATTGGCAAACTGCAATAAGAGTTGCTGTTCATGAGGTTAGAAGGCTCAAAGAGTTTGGTGTTACTAAGGGTGAATTGACTCGTTACATAGATGCTTTATTAAAAGATAGTGAGCATCTGGCGGCTATGATAGATAACGTATCTTCTGTTGATAATTTGGATTTCATCATGGAGAGTGATGCACTGGGCCATACAGTAATGGATCAGAGACAAGGACATGATAGTCTGGTTGCTGTCGCTGGAACTGTCACTCTTGAAGAGGTTAACTCAATCGGCGCCAAGGTGTTGGAATTTGTTTCTGATTTTGGAAAGCCTACTGCACCCTTTCCTGCAGCGATTGTTGCTTGTGTTCCAAAGAAAGTGCATGTTGATGGAAAGGGTGAAACTGAGTTCACCATTTCCCCTGATGAGATTACAGCTGCTACGAGAGCTGGATTGGAGGACCCCATCAAGCCTGAGCCAGAGCTTGAGGTTCCAAAAGAATTGATATCTTCATCGCAGTTACAGGAATTGAGGCAGGAGCGCATGCCATCCTTTATCACCTGTAGCCCTGAAACAAGTATGACAAAAATTTATGACAAAGAAACAGGGATCACTAGAGCTCGTCTGTCAAATGGAATTTCTGTAAACTACAAGATTTCAAAAAGTGAGGCTCGGGGAGGTGTGATGAGGCTTATAGTCGGTGGTGGACGGGCTACTGAAAGTTCTGAATCAAAAGGTTCTGTTGTTGTGGGTGTACGAACTCTTAGCGAGGGAGGTCGTGTTGGCAACTTTTCAAGGGAGCAGGTAGAACTTTTCTGTGTGAACCACTTGATTAATTGCTCGTTGGAGTCCACGGAGGAATTTATTTCTATGGAATTCCGCTTCACTTTAAGAGATAATGGGATGCGTGCCGCTTTCCAATTGCTTCACATGGTACTTGAGCATAGCATCTGGCTGGATGATGCATTTGATAGAGCAAGGCAATTATATTTGTCATATTATCGCTCCATCCCTAAAAGCTTGGAGCGCTCAACTGCTCACAAACTCATGCTGGCAATGTTGGACGGAGATGAGCGTTTTGTAGAACCTACACCAACGTCATTGCAAAATTTAACTTTGCAGTCTGTAAAGGATGCAGTGATGAACCAGTTTGTTGGCAATAACATGGAGGTAAGTATAGTTGGGGACTTCTCCGAGGAGGAAATTGAGTCGTGTATTCTTGATTACTTGGGAACAGTTCAATCAGCAAAACATTCTGAGGTTGAGCAGAAGTATGATCCGGTTGTTTTTCGAGCATCTTCTGATCTGCAGTCTCAGCAAGTGTTCTTGAAAGACACGGATGAGAGAGCATGTGCGTATATTGCAGGTCCGGCACCAAATCGTTGGGGTTTTACTGTTGACGGTAAAGACCTGTTTGAGTCGATCACTGACATTTCTTCTTGTGATGATGCGCAGCTGAAATCTGAAGAGCTAGTTGCGGAGGGTAAGGATACTCAGAAAGATCTGCAAAGAAAACTTCGTGGTCACCCGCTTTTCTTTGGTATCACAATGGGGCTCCTGGCTGAGATTATAAATTCCAGACTTTTTACTACGGTCAGAGATTCACTTGGCTTGACATATGATGTGTCATTCGAGTTAAACCTTTTTGATAGGCTGAATCTCGGATGGTATGTCATATCTGTAACATCTACTCCTGGCAAGGTTCACAAAGCTGTTGATGCCGGCAAGAATGTCCTTAGAGGTTTGCATAGCAACAAGATTTCCCAAAGGGAGCTGGACAGGGCAAAACGGACGCTTCTGATGAGACATGAAGCTGAGATCAAGTCAAATGGCTACTGGCTTGGACTTTTAGCTCACTTGCAAGCTTCTTCTGTCCCAAGGAAGGATATTTCTTGCATCAAAGATCTTACTACTTTGTATGAAATTGCTGCTATTGAGGACGTATACCTTGCATATGATCAATTGAGAATAGATGACGATTCTTTATACTCGTGTGTTGGAATTGCTGGGGCTCAAGCTGGTGGTGAAATAACTGGTGAGGACATTTTCTGCCGCTTTGAAATTTTTTCACTGTGTACACGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0007275 GO:0008150 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0010154 GO:0022414 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M16 Peptidase_M16_C

Protein Analysis

979

Amino Acids

109.71

Weight (kDa)

5.58

Isoelectric Point (pI)

41.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M16_C	PF05193	88 - 323	4.9e-12	Peptidase M16 inactive domain
Peptidase_M16_C	PF05193	654 - 745	2.9e-09	Peptidase M16 inactive domain
Peptidase_M16_C	PF05193	802 - 883	4.5e-11	Peptidase M16 inactive domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003778)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42390 AT5G42390
fragaria_vesca	FvH4_1g30291 FvH4_7g03800 FvH4_7g03800 FvH4_7g03800 FvH4_7g03800 FvH4_7g03800 FvH4_7g03800 FvH4_7g03800
malus_domestica	MD00G1159400.v1.1 MD00G1204700.v1.1
prunus_persica	Prupe.7G271900_v2.0.a1 Prupe.7G271900_v2.0.a1 Prupe.7G271900_v2.0.a1 Prupe.7G271900_v2.0.a1 Prupe.7G271900_v2.0.a1
pyrus_communis	pycom290g00010
rosa_chinensis	RchiOBHm_Chr3g0491051
rosa_laevigata	RLG00000022866
rosa_multiflora	Rmu_co8044182.1_g000001 Rmu_ssc0000386.1_g000043
rosa_roxburghii	Rroxscaffold_5G00351210 Rroxscaffold_6G00393270
rosa_rugosa	Rorug03G0245500 Rorug04G0069600 Rorug04G0069700 Rorug04G0070700 Rorug04G0070800
rosa_samantha	Rh3AG295700 Rh3BG331900 Rh3CG329000 Rh3DG329500
rosa_wichuraiana	Rw3G026110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2423
AasI	GACNNNNNNGTC	1 cut(s)	1092
Acc16I	TGCGCA	2 cut(s)	707, 2304
Acc36I	ACCTGC	2 cut(s)	1645, 2207
AccB1I	GGYRCC	2 cut(s)	1145, 2224
AccB7I	CCANNNNNTGG	1 cut(s)	873
AccI	GTMKAC	2 cut(s)	491, 2796
AciI	CCGC	8 cut(s)	127, 280, 992, 1732, 1764, 2330, 2381, 2905
AclWI	GGATC	4 cut(s)	813, 1080, 1469, 2123
AcoI	YGGCCR	1 cut(s)	394
AcuI	CTGAAG	1 cut(s)	2337
AcyI	GRCGYC	1 cut(s)	1146
AfaI	GTAC	4 cut(s)	302, 1608, 1788, 2929
AfeI	AGCGCT	1 cut(s)	1880
AfiI	CCNNNNNNNGG	4 cut(s)	373, 538, 873, 2734
AjnI	CCWGG	3 cut(s)	586, 2409, 2545
Alw21I	GWGCWC	1 cut(s)	1474
Alw26I	GTCTC	3 cut(s)	1072, 2169, 2650
AlwI	GGATC	4 cut(s)	813, 1080, 1469, 2123
Ama87I	CYCGRG	1 cut(s)	1524
Aor51HI	AGCGCT	1 cut(s)	1880
AoxI	GGCC	3 cut(s)	394, 472, 1057
ApeKI	GCWGC	4 cut(s)	1202, 1289, 2305, 2780
ArsI	GACNNNNNNTTYG	2 cut(s)	469, 501
AseI	ATTAAT	1 cut(s)	1686
Asp700I	GAANNNNTTC	1 cut(s)	636
AspLEI	GCGC	5 cut(s)	708, 1148, 1395, 1881, 2305
AspS9I	GGNCC	3 cut(s)	1057, 1312, 2219
AsuII	TTCGAA	2 cut(s)	688, 751
AvaI	CYCGRG	1 cut(s)	1524
AvaII	GGWCC	2 cut(s)	1312, 2219
BaeI	ACNNNNGTAYC	2 cut(s)	757, 790
BalI	TGGCCA	1 cut(s)	396
BanI	GGYRCC	2 cut(s)	1145, 2224
BanII	GRGCYC	3 cut(s)	1474, 2409, 2866
BauI	CACGAG	2 cut(s)	108, 2842
Bbv12I	GWGCWC	1 cut(s)	1474
BbvI	GCAGC	4 cut(s)	1214, 1276, 2317, 2767
BccI	CCATC	6 cut(s)	15, 1235, 1325, 1408, 1868, 2511
BcgI	CGANNNNNNTGC	2 cut(s)	536, 570
BciT130I	CCWGG	3 cut(s)	588, 2411, 2547
BciVI	GTATCC	1 cut(s)	2335
BclI	TGATCA	1 cut(s)	2809
BcoDI	GTCTC	3 cut(s)	1072, 2169, 2650
BfaI	CTAG	4 cut(s)	423, 444, 1467, 2324
BfmI	CTRYAG	3 cut(s)	1200, 1414, 2159
BfoI	RGCGCY	2 cut(s)	1149, 1882
BfuAI	ACCTGC	2 cut(s)	1645, 2207
BfuI	GTATCC	1 cut(s)	2335
BglII	AGATCT	2 cut(s)	2353, 2755
BisI	GCNGC	7 cut(s)	993, 1203, 1290, 1764, 2306, 2781, 2905
BlpI	GCTNAGC	1 cut(s)	218
BlsI	GCNGC	7 cut(s)	994, 1204, 1291, 1765, 2307, 2782, 2906
Bme1390I	CCNGG	3 cut(s)	588, 2411, 2547
Bme18I	GGWCC	2 cut(s)	1312, 2219
BmeT110I	CYCGRG	1 cut(s)	1524
BmgT120I	GGNCC	3 cut(s)	1057, 1312, 2219
BmiI	GGNNCC	6 cut(s)	230, 1147, 1314, 1344, 2226, 2408
BmrFI	CCNGG	3 cut(s)	588, 2411, 2547
BmrI	ACTGGG	1 cut(s)	1064
BmuI	ACTGGG	1 cut(s)	1064
BplI	GAGNNNNNCTC	2 cut(s)	1121, 1153
Bpu10I	CCTNAGC	2 cut(s)	459, 1326
Bpu1102I	GCTNAGC	1 cut(s)	218
Bpu14I	TTCGAA	2 cut(s)	688, 751
BpuEI	CTTGAG	3 cut(s)	1358, 1811, 2850
BsaHI	GRCGYC	1 cut(s)	1146
BsaJI	CCNNGG	4 cut(s)	1149, 1704, 2046, 2729
BsaWI	WCCGGW	2 cut(s)	479, 2131
BsaXI	ACNNNNNCTCC	4 cut(s)	1617, 1647, 2527, 2557
Bsc4I	CCNNNNNNNGG	4 cut(s)	373, 538, 873, 2734
Bse118I	RCCGGY	1 cut(s)	2573
Bse1I	ACTGG	6 cut(s)	184, 397, 1059, 1999, 2693, 2890
Bse3DI	GCAATG	4 cut(s)	444, 715, 1914, 1952
BseBI	CCWGG	3 cut(s)	588, 2411, 2547
BseDI	CCNNGG	4 cut(s)	1149, 1704, 2046, 2729
BseLI	CCNNNNNNNGG	4 cut(s)	373, 538, 873, 2734
BseMI	GCAATG	4 cut(s)	444, 715, 1914, 1952
BseMII	CTCAG	8 cut(s)	629, 1248, 1317, 2100, 2180, 2360, 2406, 2658
BseNI	ACTGG	6 cut(s)	184, 397, 1059, 1999, 2693, 2890
BseRI	GAGGAG	4 cut(s)	44, 260, 603, 2063
BseXI	GCAGC	4 cut(s)	1214, 1276, 2317, 2767
BseYI	CCCAGC	1 cut(s)	2858
BsgI	GTGCAG	1 cut(s)	1173
BshFI	GGCC	3 cut(s)	396, 474, 1059
BshNI	GGYRCC	2 cut(s)	1145, 2224
BsiHKAI	GWGCWC	1 cut(s)	1474
BsiHKCI	CYCGRG	1 cut(s)	1524
BsiSI	CCGG	4 cut(s)	480, 2132, 2222, 2574
BslFI	GGGAC	3 cut(s)	440, 2051, 2711
BslI	CCNNNNNNNGG	4 cut(s)	373, 538, 873, 2734
BsmAI	GTCTC	3 cut(s)	1072, 2169, 2650
BsmFI	GGGAC	3 cut(s)	440, 2051, 2711
BsnI	GGCC	3 cut(s)	396, 474, 1059
BsoBI	CYCGRG	1 cut(s)	1524
Bsp119I	TTCGAA	2 cut(s)	688, 751
Bsp1286I	GDGCHC	3 cut(s)	1474, 2409, 2866
Bsp1407I	TGTACA	1 cut(s)	2927
Bsp1720I	GCTNAGC	1 cut(s)	218
BspACI	CCGC	8 cut(s)	127, 280, 992, 1732, 1764, 2330, 2381, 2905
BspANI	GGCC	3 cut(s)	396, 474, 1059
BspCNI	CTCAG	8 cut(s)	628, 1249, 1318, 2101, 2179, 2359, 2407, 2659
BspHI	TCATGA	2 cut(s)	289, 901
BspLI	GGNNCC	6 cut(s)	230, 1147, 1314, 1344, 2226, 2408
BspMAI	CTGCAG	2 cut(s)	1204, 2163
BspMI	ACCTGC	2 cut(s)	1645, 2207
BspPI	GGATC	4 cut(s)	813, 1080, 1469, 2123
BspQI	GCTCTTC	1 cut(s)	2313
BspT104I	TTCGAA	2 cut(s)	688, 751
BspT107I	GGYRCC	2 cut(s)	1145, 2224
BsrDI	GCAATG	4 cut(s)	444, 715, 1914, 1952
BsrFI	RCCGGY	1 cut(s)	2573
BsrGI	TGTACA	1 cut(s)	2927
BsrI	ACTGG	6 cut(s)	184, 397, 1059, 1999, 2693, 2890
BssAI	RCCGGY	1 cut(s)	2573
BssECI	CCNNGG	4 cut(s)	1149, 1704, 2046, 2729
BssNAI	GTATAC	1 cut(s)	2797
BssNI	GRCGYC	1 cut(s)	1146
BssSI	CACGAG	2 cut(s)	108, 2842
BssT1I	CCWWGG	2 cut(s)	1149, 2729
Bst1107I	GTATAC	1 cut(s)	2797
Bst2BI	CACGAG	2 cut(s)	108, 2842
Bst2UI	CCWGG	3 cut(s)	588, 2411, 2547
Bst6I	CTCTTC	3 cut(s)	716, 1122, 2313
BstACI	GRCGYC	1 cut(s)	1146
BstAPI	GCANNNNNTGC	1 cut(s)	434
BstAUI	TGTACA	1 cut(s)	2927
BstBI	TTCGAA	2 cut(s)	688, 751
BstC8I	GCNNGC	6 cut(s)	129, 1397, 1761, 1905, 2575, 2715
BstDSI	CCRYGG	1 cut(s)	1704
BstEII	GGTNACC	1 cut(s)	2375
BstENI	CCTNNNNNAGG	1 cut(s)	536
BstH2I	RGCGCY	2 cut(s)	1149, 1882
BstHHI	GCGC	5 cut(s)	708, 1148, 1395, 1881, 2305
BstMAI	GTCTC	3 cut(s)	1072, 2169, 2650
BstMWI	GCNNNNNNNGC	8 cut(s)	434, 1211, 1298, 1878, 2167, 2213, 2222, 2570
BstNI	CCWGG	3 cut(s)	588, 2411, 2547
BstNSI	RCATGY	3 cut(s)	1238, 1399, 2205
BstPI	GGTNACC	1 cut(s)	2375
BstSCI	CCNGG	3 cut(s)	586, 2409, 2545
BstSFI	CTRYAG	3 cut(s)	1200, 1414, 2159
BstV1I	GCAGC	4 cut(s)	1214, 1276, 2317, 2767
BstX2I	RGATCY	2 cut(s)	2353, 2755
BstXI	CCANNNNNNTGG	4 cut(s)	404, 1156, 2006, 2235
BstYI	RGATCY	2 cut(s)	2353, 2755
BstZ17I	GTATAC	1 cut(s)	2797
BsuI	GTATCC	1 cut(s)	2335
BsuRI	GGCC	3 cut(s)	396, 474, 1059
BtgI	CCRYGG	1 cut(s)	1704
BtgZI	GCGATG	1 cut(s)	1350
BtsI	GCAGTG	2 cut(s)	581, 1995
BtsIMutI	CAGTG	5 cut(s)	581, 1052, 1995, 2277, 2921
BveI	ACCTGC	2 cut(s)	1645, 2207
Cac8I	GCNNGC	6 cut(s)	129, 1397, 1761, 1905, 2575, 2715
CciI	TCATGA	2 cut(s)	289, 901
CfoI	GCGC	5 cut(s)	708, 1148, 1395, 1881, 2305
Cfr10I	RCCGGY	1 cut(s)	2573
Cfr13I	GGNCC	3 cut(s)	1057, 1312, 2219
CseI	GACGC	1 cut(s)	2653
Csp6I	GTAC	4 cut(s)	301, 1607, 1787, 2928
CviQI	GTAC	4 cut(s)	301, 1607, 1787, 2928
DinI	GGCGCC	1 cut(s)	1147
DrdI	GACNNNNNNGTC	1 cut(s)	1092
DseDI	GACNNNNNNGTC	1 cut(s)	1092
EaeI	YGGCCR	1 cut(s)	394
Eam1104I	CTCTTC	3 cut(s)	716, 1122, 2313
EarI	CTCTTC	3 cut(s)	716, 1122, 2313
Ecl136II	GAGCTC	1 cut(s)	1472
Eco130I	CCWWGG	2 cut(s)	1149, 2729
Eco24I	GRGCYC	3 cut(s)	1474, 2409, 2866
Eco32I	GATATC	1 cut(s)	1359
Eco47I	GGWCC	2 cut(s)	1312, 2219
Eco47III	AGCGCT	1 cut(s)	1880
Eco53kI	GAGCTC	1 cut(s)	1472
Eco57I	CTGAAG	1 cut(s)	2337
Eco88I	CYCGRG	1 cut(s)	1524
Eco91I	GGTNACC	1 cut(s)	2375
EcoICRI	GAGCTC	1 cut(s)	1472
EcoNI	CCTNNNNNAGG	1 cut(s)	536
EcoO109I	RGGNCCY	1 cut(s)	1312
EcoO65I	GGTNACC	1 cut(s)	2375
EcoRI	GAATTC	1 cut(s)	1727
EcoRII	CCWGG	3 cut(s)	586, 2409, 2545
EcoRV	GATATC	1 cut(s)	1359
EcoT14I	CCWWGG	2 cut(s)	1149, 2729
EcoT22I	ATGCAT	1 cut(s)	1819
EcoT38I	GRGCYC	3 cut(s)	1474, 2409, 2866
EgeI	GGCGCC	1 cut(s)	1147
EheI	GGCGCC	1 cut(s)	1147
ErhI	CCWWGG	2 cut(s)	1149, 2729
FalI	AAGNNNNNCTT	2 cut(s)	713, 745
FaqI	GGGAC	3 cut(s)	440, 2051, 2711
FauI	CCCGC	2 cut(s)	120, 2388
FauNDI	CATATG	2 cut(s)	2470, 2806
FbaI	TGATCA	1 cut(s)	2809
FblI	GTMKAC	2 cut(s)	491, 2796
Fnu4HI	GCNGC	7 cut(s)	993, 1203, 1290, 1764, 2306, 2781, 2905
FriOI	GRGCYC	3 cut(s)	1474, 2409, 2866
Fsp4HI	GCNGC	7 cut(s)	993, 1203, 1290, 1764, 2306, 2781, 2905
FspBI	CTAG	4 cut(s)	423, 444, 1467, 2324
FspI	TGCGCA	2 cut(s)	707, 2304
GlaI	GCGC	5 cut(s)	707, 1147, 1394, 1880, 2304
GluI	GCNGC	7 cut(s)	993, 1203, 1290, 1764, 2306, 2781, 2905
GsaI	CCCAGC	1 cut(s)	2862
HaeII	RGCGCY	2 cut(s)	1149, 1882
HaeIII	GGCC	3 cut(s)	396, 474, 1059
HapII	CCGG	4 cut(s)	480, 2132, 2222, 2574
HgaI	GACGC	1 cut(s)	2653
HhaI	GCGC	5 cut(s)	708, 1148, 1395, 1881, 2305
Hin1I	GRCGYC	1 cut(s)	1146
Hin6I	GCGC	5 cut(s)	706, 1146, 1393, 1879, 2303
HinP1I	GCGC	5 cut(s)	706, 1146, 1393, 1879, 2303
HincII	GTYRAC	3 cut(s)	178, 1135, 2251
HindII	GTYRAC	3 cut(s)	178, 1135, 2251
HindIII	AAGCTT	3 cut(s)	461, 1870, 2715
HpaI	GTTAAC	1 cut(s)	1135
HpaII	CCGG	4 cut(s)	480, 2132, 2222, 2574
Hpy188III	TCNNGA	8 cut(s)	232, 290, 819, 902, 1124, 2072, 2179, 2430
HpyAV	CCTTC	6 cut(s)	59, 112, 816, 821, 906, 2728
HpyCH4IV	ACGT	3 cut(s)	1008, 1949, 2793
HpyF10VI	GCNNNNNNNGC	8 cut(s)	434, 1211, 1298, 1878, 2167, 2213, 2222, 2570
HpySE526I	ACGT	3 cut(s)	1008, 1949, 2793
Hsp92I	GRCGYC	1 cut(s)	1146
HspAI	GCGC	5 cut(s)	706, 1146, 1393, 1879, 2303
KasI	GGCGCC	1 cut(s)	1145
KroI	GCCGGC	1 cut(s)	2573
KroNI	GCCGGC	1 cut(s)	2575
Ksp22I	TGATCA	1 cut(s)	2809
KspAI	GTTAAC	1 cut(s)	1135
LguI	GCTCTTC	1 cut(s)	2313
LmnI	GCTCC	7 cut(s)	247, 1390, 1651, 1862, 1876, 2412, 2623
Lsp1109I	GCAGC	4 cut(s)	1214, 1276, 2317, 2767
MaeI	CTAG	4 cut(s)	423, 444, 1467, 2324
MaeII	ACGT	3 cut(s)	1008, 1949, 2793
MboII	GAAGA	9 cut(s)	96, 733, 1005, 1139, 1353, 2142, 2280, 2330, 2712
MfeI	CAATTG	3 cut(s)	795, 1772, 2813
MflI	RGATCY	2 cut(s)	2353, 2755
MhlI	GDGCHC	3 cut(s)	1474, 2409, 2866
MlsI	TGGCCA	1 cut(s)	396
MluNI	TGGCCA	1 cut(s)	396
Mly113I	GGCGCC	1 cut(s)	1146
MlyI	GAGTC	5 cut(s)	809, 943, 1709, 2069, 2279
MmeI	TCCRAC	5 cut(s)	537, 1137, 1677, 1893, 2830
Mox20I	TGGCCA	1 cut(s)	396
Mph1103I	ATGCAT	1 cut(s)	1819
MroNI	GCCGGC	1 cut(s)	2573
MroXI	GAANNNNTTC	1 cut(s)	636
MscI	TGGCCA	1 cut(s)	396
MseI	TTAA	9 cut(s)	255, 534, 654, 971, 1134, 1686, 1742, 1964, 2489
MslI	CAYNNNNRTG	1 cut(s)	1239
Msp20I	TGGCCA	1 cut(s)	396
MspA1I	CMGCKG	2 cut(s)	1289, 2308
MspI	CCGG	4 cut(s)	480, 2132, 2222, 2574
MspR9I	CCNGG	3 cut(s)	588, 2411, 2547
MunI	CAATTG	3 cut(s)	795, 1772, 2813
MvaI	CCWGG	3 cut(s)	588, 2411, 2547
MwoI	GCNNNNNNNGC	8 cut(s)	434, 1211, 1298, 1878, 2167, 2213, 2222, 2570
NaeI	GCCGGC	1 cut(s)	2575
NarI	GGCGCC	1 cut(s)	1146
NdeI	CATATG	2 cut(s)	2470, 2806
NgoMIV	GCCGGC	1 cut(s)	2573
NlaIV	GGNNCC	6 cut(s)	230, 1147, 1314, 1344, 2226, 2408
NmuCI	GTSAC	6 cut(s)	579, 698, 812, 838, 1117, 2375
NsbI	TGCGCA	2 cut(s)	707, 2304
NsiI	ATGCAT	1 cut(s)	1819
NspI	RCATGY	3 cut(s)	1238, 1399, 2205
NspV	TTCGAA	2 cut(s)	688, 751
PaeI	GCATGC	1 cut(s)	1399
PagI	TCATGA	2 cut(s)	289, 901
PciSI	GCTCTTC	1 cut(s)	2313
PdiI	GCCGGC	1 cut(s)	2575
PdmI	GAANNNNTTC	1 cut(s)	636
PfeI	GAWTC	9 cut(s)	35, 637, 670, 726, 753, 1580, 2453, 2509, 2831
PflMI	CCANNNNNTGG	1 cut(s)	873
PkrI	GCNGC	7 cut(s)	994, 1204, 1291, 1765, 2307, 2782, 2906
PleI	GAGTC	5 cut(s)	809, 943, 1708, 2068, 2278
PluTI	GGCGCC	1 cut(s)	1149
PpsI	GAGTC	5 cut(s)	809, 943, 1708, 2068, 2278
PpuMI	RGGWCCY	1 cut(s)	1312
PshBI	ATTAAT	1 cut(s)	1686
PsiI	TTATAA	1 cut(s)	2423
Psp124BI	GAGCTC	1 cut(s)	1474
Psp5II	RGGWCCY	1 cut(s)	1312
Psp6I	CCWGG	3 cut(s)	586, 2409, 2545
PspEI	GGTNACC	1 cut(s)	2375
PspFI	CCCAGC	1 cut(s)	2858
PspGI	CCWGG	3 cut(s)	586, 2409, 2545
PspN4I	GGNNCC	6 cut(s)	230, 1147, 1314, 1344, 2226, 2408
PspPI	GGNCC	3 cut(s)	1057, 1312, 2219
PspPPI	RGGWCCY	1 cut(s)	1312
PstI	CTGCAG	2 cut(s)	1204, 2163
PsuI	RGATCY	2 cut(s)	2353, 2755
PvuII	CAGCTG	2 cut(s)	1289, 2308
RsaI	GTAC	4 cut(s)	302, 1608, 1788, 2929
RsaNI	GTAC	4 cut(s)	301, 1607, 1787, 2928
RseI	CAYNNNNRTG	1 cut(s)	1239
SacI	GAGCTC	1 cut(s)	1474
SapI	GCTCTTC	1 cut(s)	2313
SaqAI	TTAA	9 cut(s)	255, 534, 654, 971, 1134, 1686, 1742, 1964, 2489
SatI	GCNGC	7 cut(s)	993, 1203, 1290, 1764, 2306, 2781, 2905
Sau96I	GGNCC	3 cut(s)	1057, 1312, 2219
SchI	GAGTC	5 cut(s)	809, 943, 1709, 2069, 2279
ScrFI	CCNGG	3 cut(s)	588, 2411, 2547
SduI	GDGCHC	3 cut(s)	1474, 2409, 2866
SfcI	CTRYAG	3 cut(s)	1200, 1414, 2159
SfoI	GGCGCC	1 cut(s)	1147
SfuI	TTCGAA	2 cut(s)	688, 751
SinI	GGWCC	2 cut(s)	1312, 2219
SmiMI	CAYNNNNRTG	1 cut(s)	1239
SmlI	CTYRAG	3 cut(s)	1337, 1790, 2865
SmoI	CTYRAG	3 cut(s)	1337, 1790, 2865
SphI	GCATGC	1 cut(s)	1399
SsiI	CCGC	8 cut(s)	127, 280, 992, 1732, 1764, 2330, 2381, 2905
SspDI	GGCGCC	1 cut(s)	1145
SspMI	CTAG	4 cut(s)	423, 444, 1467, 2324
SstI	GAGCTC	1 cut(s)	1474
StyD4I	CCNGG	3 cut(s)	586, 2409, 2545
StyI	CCWWGG	2 cut(s)	1149, 2729
TaiI	ACGT	3 cut(s)	1011, 1952, 2796
TaqI	TCGA	6 cut(s)	270, 688, 751, 2143, 2273, 2484
TatI	WGTACW	1 cut(s)	2927
TauI	GCSGC	3 cut(s)	995, 1766, 2907
TfiI	GAWTC	9 cut(s)	35, 637, 670, 726, 753, 1580, 2453, 2509, 2831
Tru1I	TTAA	9 cut(s)	255, 534, 654, 971, 1134, 1686, 1742, 1964, 2489
Tru9I	TTAA	9 cut(s)	255, 534, 654, 971, 1134, 1686, 1742, 1964, 2489
TscAI	CASTG	5 cut(s)	588, 1059, 1995, 2284, 2928
TseFI	GTSAC	6 cut(s)	579, 698, 812, 838, 1117, 2375
TseI	GCWGC	4 cut(s)	1202, 1289, 2305, 2780
Tsp45I	GTSAC	6 cut(s)	579, 698, 812, 838, 1117, 2375
TspGWI	ACGGA	4 cut(s)	1721, 1932, 2204, 2656
TspRI	CASTG	5 cut(s)	588, 1059, 1995, 2284, 2928
Van91I	CCANNNNNTGG	1 cut(s)	873
VpaK11BI	GGWCC	2 cut(s)	1312, 2219
VspI	ATTAAT	1 cut(s)	1686
XagI	CCTNNNNNAGG	1 cut(s)	536
XceI	RCATGY	3 cut(s)	1238, 1399, 2205
XmiI	GTMKAC	2 cut(s)	491, 2796
XmnI	GAANNNNTTC	1 cut(s)	636
XspI	CTAG	4 cut(s)	423, 444, 1467, 2324
Zsp2I	ATGCAT	1 cut(s)	1819

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.