Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0003778

Physical Location & Seq

Genomic Coordinates Forward (+)

10915323 .. 10921422

Gene Structure 6100 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0070800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2850 bp

ATGAAGCCAAGAGATCGCAAAATTATAAATGCCTGTAGTGCAATGAAGAGATTTGGCATTACACCTGCCAAAACAAAGACAGCACTTAAGACACTTCTGAAATTGTATGAAAATAACTGGGAGCTTATCGAAGATGAGAATTACAAAGTACTTTTTGATGTTTTGATGCCAGAGGAACAGAGAGTGGAACCCAAGGGAAAAGAAACTTTGATTCTTGAATCGGAGGGAATGACAACTTCTCACAAAAAAGTTCCATCAAGTGTCAAAACTGAAGTTTCTGAACTTCCAATCAAGAGATTATTCACAGGACAAGAGGAAAAACATGCATCGTCACTCTCCAAATCTTCCTTGGATTCAAATCCATCAAGAAGAGCACATCAGAATTATGGTGATTCTGGTGCATCTCAGCCATTACTGAGAAGAGCCCGCCTAATTAGATGCCGAGAAGAAGCTTTCATCCGTGAATCAAAGCGGGAATTGAAATCAAAGAACAAAGAAGCTCCACCAGATAATAATACTGAAGTTTTTGAACTTCCAACTAAGAGATTATACACAAGACAACAGAAAAAACAGGCATTGTCCCTATCCAAATCATGCATGGAAATACCTCCATCAAGAAGGGCACATCAGAGTGATGATGATCTGTTTACAGATTCTGAAGAAGCTCAACCACTATTGAAAAGAACCCGCCTAAGAGACCAGGAAGGAGAAGCTATGATCTGCGACTCAAAGGGAGTGATTTATAATAACATCAAAAGTCCATCAAATGGTAAAACTGAAGTTGTTGAAGTTCCAACCAATAGATACACAAGACAACGAAAAAAGAAGGCATCCTCTCTCCCCAAATCTTGCGTGGAAACAAGTCTCTCAACAATGGCACATCAGAATGATGGTAGTCTGTTTTATGATTCTGAAGAATCTGAAGAAACTCCACTAATATCTAGAAGAAATCAGGGGAGACACCAGAAAAAGAAAGTTTTGGTTTCTGGGAATAAATTGGTTTCTGGCATTCCACCGCCAGCCAAAAGTCCCATTGTGATATGTCTAGATAGTTCTTCAGATAGTGATGTTTGTAATGTTGATGAAGAAACATTAGAGGCACTGGATGAGGAACCATTGACTGTGGACAACATAGCTTGTGTTTCAGATATGTCACACCACCATCCGAAGGACGTTTTGGTTTCTGGGAATAAATTGGATTCTGGCATTCCACCACCAGCCAAAAGTCCCATTGTGATATGTCTAGAGAATTCTTCAGATAGTGATGTTTGTAATGTTGATAAAGAAAGATTGGAGGCACTGGATGTGGAACCATTGACTGTGGATAACATAGCTTGTGTTTCAGATATGTCACAGATGGATGATGATGAAGACAGGTTGGAGTTACTGAAAGTAGAACCATTGATTGTGGACAGCAGAGGTTGTGTTTTAGATTCGTCACAGGTTGATGTTGCATCATCTCTTTCAAAGGGAGAAGTGAATATTTCTCTGACTTGTAACTCTTTCCCACAGTCTGATATTCATTTTCCATGTATGGAAGTGGTGGAAGAGAGAGGCATTAAATCATATTGCAATCAAGAATGCTCTTTGGCTATAGGAACTGATTCAATTACTGATGAAAATGCAAGGTTCAGAGAGGTGCCCCAGCTACAAAACTCGAAGTCACAAGATGTTCTTGCCATAAAAGATGATTATCAAGGCAGTAATTGCAGTGCTCTAGGATTTCCTACTGAAGTATTTGTATTTCAGAATCTTATCAAGATTGTACCCCATATACCCAAACACATAGATCCTTGTAGATTTGGATGTCTTCACAGTTTAATCGGTTTTCCAATTAAGGATATTGAGAATTTTTTTGGTAAAAGTGGAAAAAGATTAAGGGTTCTCCCAGGCCTGCAATTCTCTAAGTTACGTAATGTGGAGGCTGCTGAGAATTCAGAAGTTGTAAAGTTATCTGTTTATGTAGATAACATAACTAGAGGTGAAGAAAATTTGAAAATTCCCTTGGAAGGTGGAAGAAATGCTGAAGATCTGTCGACATTCTTTTACATGCCTCAGAATGTAGTTTATAAAAATGCCCATGTGAATTTTGCACTTCGTTGTACATCTAACCAGGCTTGGTGTTCACATTGTTTCGGGAATTGTCTCGCATCACCGGTACCATGTGCCTGTGCTATGCAAACTGCGGGTGGGTTTGCGTACGCACCAGGTGGATCGGTCAAGGATACTTTTATGGAAGAATGTTTGTCAGTGATCCAGGAACGTAAACAACACCACTACTTCTATTGTAAAAAATGCCCTCTTGAAAGTTTTAGGAAGAAAAAGAGTTCTAGCCCATGCAAAGGCCATTTATTACAGAAATTTGTAAAGGAATGTTGGTCTAAATGTGGATGCAACAAGAACTGTGGGAACCGGATTATTCAACAAGGCATTTCTTTCAAGCTGCAGGTGTTTTTGACACCCGAAGGGAAAGGGTGGGGTCTTCGAACACTGGAGGACTTGCCGAGAGGGGCTTTTGTTTGTGAGTATGTTGGAGAGATAGTAACAATCACAGAACTATATGAGCGAAATATGCAAAGTGCTGGTAGGAGGCATACATACACGGTGCTACTAGATGCAAACTGGCATTCAAAGGGTGTCTTGAAAGATGAAGAGGCACTTTGCTTAGACGCTACAGTTTATGGAAATGTTGCAAGGTTTATCAACCACAGATGCTCTGATGCTACCTTGGTTCAGATCCCTGTTGAAGTGGAGACTCCTGACCATCACTATTATCATTTTGCAGGTTGCCCTTTTCACAACAAGGAATGTTGCTGCTATGGAAGAGCTTACTTGGGACTATGGCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0007275 GO:0008150 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0010154 GO:0022414 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M16 Peptidase_M16_C

Protein Analysis

949

Amino Acids

106.5

Weight (kDa)

6.46

Isoelectric Point (pI)

56.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WIYLD	PF10440	4 - 59	6.1e-17	Ubiquitin-binding WIYLD domain
Pre-SET	PF05033	660 - 805	2.8e-06	Pre-SET motif
SET	PF00856	825 - 912	2.2e-11	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003778)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42390 AT5G42390
fragaria_vesca	FvH4_1g30291 FvH4_7g03800 FvH4_7g03800 FvH4_7g03800 FvH4_7g03800 FvH4_7g03800 FvH4_7g03800 FvH4_7g03800
malus_domestica	MD00G1159400.v1.1 MD00G1204700.v1.1
prunus_persica	Prupe.7G271900_v2.0.a1 Prupe.7G271900_v2.0.a1 Prupe.7G271900_v2.0.a1 Prupe.7G271900_v2.0.a1 Prupe.7G271900_v2.0.a1
pyrus_communis	pycom290g00010
rosa_chinensis	RchiOBHm_Chr3g0491051
rosa_laevigata	RLG00000022866
rosa_multiflora	Rmu_co8044182.1_g000001 Rmu_ssc0000386.1_g000043
rosa_roxburghii	Rroxscaffold_5G00351210 Rroxscaffold_6G00393270
rosa_rugosa	Rorug03G0245500 Rorug04G0069600 Rorug04G0069700 Rorug04G0070700 Rorug04G0070800
rosa_samantha	Rh3AG295700 Rh3BG331900 Rh3CG329000 Rh3DG329500
rosa_wichuraiana	Rw3G026110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	26, 744, 2070
AarI	CACCTGC	2 cut(s)	73, 2437
Acc36I	ACCTGC	3 cut(s)	73, 2437, 2774
Acc65I	GGTACC	1 cut(s)	2158
AccB1I	GGYRCC	2 cut(s)	1639, 2158
AccB7I	CCANNNNNTGG	1 cut(s)	767
AccI	GTMKAC	1 cut(s)	2036
AciI	CCGC	5 cut(s)	427, 472, 688, 1016, 2186
AclWI	GGATC	4 cut(s)	1784, 2221, 2248, 2731
AcsI	RAATTY	7 cut(s)	1249, 1849, 1933, 1990, 1998, 2086, 2360
AdeI	CACNNNGTG	1 cut(s)	2210
AfaI	GTAC	5 cut(s)	150, 1767, 2104, 2160, 2201
AfiI	CCNNNNNNNGG	4 cut(s)	767, 1168, 2009, 2342
AflII	CTTAAG	1 cut(s)	86
AgeI	ACCGGT	1 cut(s)	2155
AjnI	CCWGG	5 cut(s)	699, 1888, 2112, 2206, 2256
AjuI	GAANNNNNNNTTGG	4 cut(s)	1160, 1192, 1988, 2020
Alw21I	GWGCWC	2 cut(s)	376, 1717
Alw26I	GTCTC	5 cut(s)	690, 869, 952, 2150, 2747
AlwI	GGATC	4 cut(s)	1784, 2221, 2248, 2731
AlwNI	CAGNNNCTG	1 cut(s)	656
AoxI	GGCC	2 cut(s)	1891, 2344
ApeKI	GCWGC	3 cut(s)	1925, 2443, 2814
ApoI	RAATTY	7 cut(s)	1249, 1849, 1933, 1990, 1998, 2086, 2360
AsiGI	ACCGGT	1 cut(s)	2155
Asp700I	GAANNNNTTC	1 cut(s)	1603
Asp718I	GGTACC	1 cut(s)	2158
AsuHPI	GGTGA	3 cut(s)	401, 1994, 2145
AsuII	TTCGAA	1 cut(s)	2485
BaeGI	GKGCMC	2 cut(s)	625, 1644
BanI	GGYRCC	2 cut(s)	1639, 2158
BanII	GRGCYC	1 cut(s)	427
BbsI	GAAGAC	3 cut(s)	1377, 1802, 2474
Bbv12I	GWGCWC	2 cut(s)	376, 1717
BbvI	GCAGC	3 cut(s)	1912, 2430, 2801
BccI	CCATC	8 cut(s)	262, 370, 619, 769, 884, 1170, 1351, 2772
BciT130I	CCWGG	5 cut(s)	701, 1890, 2114, 2208, 2258
BciVI	GTATCC	1 cut(s)	2218
BcoDI	GTCTC	5 cut(s)	690, 869, 952, 2150, 2747
BfaI	CTAG	7 cut(s)	942, 1046, 1244, 1718, 1977, 2331, 2612
BfmI	CTRYAG	4 cut(s)	34, 1593, 2444, 2673
BfrI	CTTAAG	1 cut(s)	86
BfuAI	ACCTGC	3 cut(s)	73, 2437, 2774
BfuI	GTATCC	1 cut(s)	2218
BglII	AGATCT	1 cut(s)	2029
BisI	GCNGC	3 cut(s)	1926, 2444, 2815
BlsI	GCNGC	3 cut(s)	1927, 2445, 2816
BmcAI	AGTACT	1 cut(s)	150
Bme1390I	CCNGG	5 cut(s)	701, 1890, 2114, 2208, 2258
BmiI	GGNNCC	6 cut(s)	189, 1113, 1311, 1641, 2160, 2411
BmrFI	CCNGG	5 cut(s)	701, 1890, 2114, 2208, 2258
BmrI	ACTGGG	1 cut(s)	127
BmuI	ACTGGG	1 cut(s)	127
BpiI	GAAGAC	3 cut(s)	1377, 1802, 2474
BpmI	CTGGAG	1 cut(s)	2513
Bpu14I	TTCGAA	1 cut(s)	2485
BsaAI	YACGTR	1 cut(s)	1913
BsaBI	GATNNNNATC	3 cut(s)	357, 639, 1692
BsaI	GGTCTC	1 cut(s)	690
BsaJI	CCNNGG	5 cut(s)	192, 348, 1888, 2004, 2727
BsaWI	WCCGGW	2 cut(s)	2155, 2412
BsaXI	ACNNNNNCTCC	2 cut(s)	2526, 2556
Bsc4I	CCNNNNNNNGG	4 cut(s)	767, 1168, 2009, 2342
Bse118I	RCCGGY	1 cut(s)	2155
Bse1I	ACTGG	5 cut(s)	122, 1107, 1305, 2496, 2627
Bse3DI	GCAATG	1 cut(s)	48
Bse8I	GATNNNNATC	3 cut(s)	357, 639, 1692
BseBI	CCWGG	5 cut(s)	701, 1890, 2114, 2208, 2258
BseDI	CCNNGG	5 cut(s)	192, 348, 1888, 2004, 2727
BseGI	GGATG	8 cut(s)	456, 830, 1111, 1162, 1309, 1366, 1811, 2396
BseJI	GATNNNNATC	3 cut(s)	357, 639, 1692
BseLI	CCNNNNNNNGG	4 cut(s)	767, 1168, 2009, 2342
BseMI	GCAATG	1 cut(s)	48
BseMII	CTCAG	4 cut(s)	407, 419, 1920, 2069
BseNI	ACTGG	5 cut(s)	122, 1107, 1305, 2496, 2627
BseSI	GKGCMC	2 cut(s)	625, 1644
BseXI	GCAGC	3 cut(s)	1912, 2430, 2801
BseYI	CCCAGC	1 cut(s)	1644
BshFI	GGCC	2 cut(s)	1893, 2346
BshNI	GGYRCC	2 cut(s)	1639, 2158
BshTI	ACCGGT	1 cut(s)	2155
BsiHKAI	GWGCWC	2 cut(s)	376, 1717
BsiSI	CCGG	2 cut(s)	2156, 2413
BsiWI	CGTACG	1 cut(s)	2199
BslFI	GGGAC	3 cut(s)	565, 1014, 1212
BslI	CCNNNNNNNGG	4 cut(s)	767, 1168, 2009, 2342
BsmAI	GTCTC	5 cut(s)	690, 869, 952, 2150, 2747
BsmFI	GGGAC	3 cut(s)	565, 1014, 1212
BsmI	GAATGC	4 cut(s)	1008, 1206, 1586, 2626
BsnI	GGCC	2 cut(s)	1893, 2346
Bso31I	GGTCTC	1 cut(s)	690
Bsp119I	TTCGAA	1 cut(s)	2485
Bsp1286I	GDGCHC	5 cut(s)	376, 427, 625, 1644, 1717
Bsp1407I	TGTACA	1 cut(s)	2102
Bsp143I	GATC	8 cut(s)	13, 640, 717, 1789, 2029, 2213, 2253, 2736
BspACI	CCGC	5 cut(s)	427, 472, 688, 1016, 2186
BspANI	GGCC	2 cut(s)	1893, 2346
BspCNI	CTCAG	4 cut(s)	408, 418, 1921, 2068
BspLI	GGNNCC	6 cut(s)	189, 1113, 1311, 1641, 2160, 2411
BspMAI	CTGCAG	1 cut(s)	2448
BspMI	ACCTGC	3 cut(s)	73, 2437, 2774
BspPI	GGATC	4 cut(s)	1784, 2221, 2248, 2731
BspQI	GCTCTTC	3 cut(s)	364, 415, 2818
BspT104I	TTCGAA	1 cut(s)	2485
BspT107I	GGYRCC	2 cut(s)	1639, 2158
BspTI	CTTAAG	1 cut(s)	86
BspTNI	GGTCTC	1 cut(s)	690
BsrDI	GCAATG	1 cut(s)	48
BsrFI	RCCGGY	1 cut(s)	2155
BsrGI	TGTACA	1 cut(s)	2102
BsrI	ACTGG	5 cut(s)	122, 1107, 1305, 2496, 2627
BssAI	RCCGGY	1 cut(s)	2155
BssECI	CCNNGG	5 cut(s)	192, 348, 1888, 2004, 2727
BssMI	GATC	8 cut(s)	13, 640, 717, 1789, 2029, 2213, 2253, 2736
BssT1I	CCWWGG	4 cut(s)	192, 348, 2004, 2727
Bst2UI	CCWGG	5 cut(s)	701, 1890, 2114, 2208, 2258
Bst4CI	ACNGT	7 cut(s)	1123, 1321, 1512, 1817, 2405, 2605, 2677
Bst6I	CTCTTC	6 cut(s)	41, 364, 415, 1542, 2646, 2818
BstAFI	CTTAAG	1 cut(s)	86
BstAPI	GCANNNNNTGC	1 cut(s)	1707
BstAUI	TGTACA	1 cut(s)	2102
BstBAI	YACGTR	1 cut(s)	1913
BstBI	TTCGAA	1 cut(s)	2485
BstC8I	GCNNGC	3 cut(s)	427, 1020, 1895
BstDEI	CTNAG	8 cut(s)	405, 416, 540, 692, 1905, 1929, 2055, 2665
BstF5I	GGATG	8 cut(s)	456, 830, 1111, 1162, 1309, 1366, 1811, 2396
BstKTI	GATC	8 cut(s)	16, 643, 720, 1792, 2032, 2216, 2256, 2739
BstMAI	GTCTC	5 cut(s)	690, 869, 952, 2150, 2747
BstMBI	GATC	8 cut(s)	13, 640, 717, 1789, 2029, 2213, 2253, 2736
BstMWI	GCNNNNNNNGC	3 cut(s)	38, 1707, 2572
BstNI	CCWGG	5 cut(s)	701, 1890, 2114, 2208, 2258
BstNSI	RCATGY	2 cut(s)	326, 2053
BstSCI	CCNGG	5 cut(s)	699, 1888, 2112, 2206, 2256
BstSFI	CTRYAG	4 cut(s)	34, 1593, 2444, 2673
BstSLI	GKGCMC	2 cut(s)	625, 1644
BstSNI	TACGTA	1 cut(s)	1913
BstV1I	GCAGC	3 cut(s)	1912, 2430, 2801
BstV2I	GAAGAC	3 cut(s)	1377, 1802, 2474
BstX2I	RGATCY	3 cut(s)	1789, 2029, 2736
BstYI	RGATCY	3 cut(s)	1789, 2029, 2736
BsuI	GTATCC	1 cut(s)	2218
BsuRI	GGCC	2 cut(s)	1893, 2346
BtsCI	GGATG	8 cut(s)	456, 830, 1111, 1162, 1309, 1366, 1811, 2396
BtsI	GCAGTG	1 cut(s)	1717
BtsIMutI	CAGTG	5 cut(s)	1100, 1298, 1717, 2256, 2489
BveI	ACCTGC	3 cut(s)	73, 2437, 2774
Cac8I	GCNNGC	3 cut(s)	427, 1020, 1895
CaiI	CAGNNNCTG	1 cut(s)	656
Cfr10I	RCCGGY	1 cut(s)	2155
CseI	GACGC	1 cut(s)	2678
CsiI	ACCWGGT	1 cut(s)	2206
Csp6I	GTAC	5 cut(s)	149, 1766, 2103, 2159, 2200
CspAI	ACCGGT	1 cut(s)	2155
CspCI	CAANNNNNGTGG	2 cut(s)	2386, 2421
CviAII	CATG	8 cut(s)	323, 594, 598, 1530, 2050, 2081, 2163, 2337
CviQI	GTAC	5 cut(s)	149, 1766, 2103, 2159, 2200
DdeI	CTNAG	8 cut(s)	405, 416, 540, 692, 1905, 1929, 2055, 2665
DpnI	GATC	8 cut(s)	15, 642, 719, 1791, 2031, 2215, 2255, 2738
DpnII	GATC	8 cut(s)	13, 640, 717, 1789, 2029, 2213, 2253, 2736
DraIII	CACNNNGTG	1 cut(s)	2210
Eam1104I	CTCTTC	6 cut(s)	41, 364, 415, 1542, 2646, 2818
EarI	CTCTTC	6 cut(s)	41, 364, 415, 1542, 2646, 2818
Eco105I	TACGTA	1 cut(s)	1913
Eco130I	CCWWGG	4 cut(s)	192, 348, 2004, 2727
Eco147I	AGGCCT	1 cut(s)	1893
Eco24I	GRGCYC	1 cut(s)	427
Eco31I	GGTCTC	1 cut(s)	690
EcoRI	GAATTC	2 cut(s)	1249, 1933
EcoRII	CCWGG	5 cut(s)	699, 1888, 2112, 2206, 2256
EcoT14I	CCWWGG	4 cut(s)	192, 348, 2004, 2727
EcoT22I	ATGCAT	2 cut(s)	328, 599
EcoT38I	GRGCYC	1 cut(s)	427
ErhI	CCWWGG	4 cut(s)	192, 348, 2004, 2727
FaeI	CATG	8 cut(s)	326, 597, 601, 1533, 2053, 2084, 2166, 2340
FalI	AAGNNNNNCTT	6 cut(s)	1659, 1691, 2624, 2656, 2643, 2675
FaqI	GGGAC	3 cut(s)	565, 1014, 1212
FatI	CATG	8 cut(s)	322, 593, 597, 1529, 2049, 2080, 2162, 2336
FauI	CCCGC	4 cut(s)	434, 465, 695, 2179
FblI	GTMKAC	1 cut(s)	2036
Fnu4HI	GCNGC	3 cut(s)	1926, 2444, 2815
FokI	GGATG	8 cut(s)	443, 817, 1118, 1149, 1316, 1373, 1818, 2403
FriOI	GRGCYC	1 cut(s)	427
Fsp4HI	GCNGC	3 cut(s)	1926, 2444, 2815
FspBI	CTAG	7 cut(s)	942, 1046, 1244, 1718, 1977, 2331, 2612
GluI	GCNGC	3 cut(s)	1926, 2444, 2815
GsaI	CCCAGC	1 cut(s)	1648
GsuI	CTGGAG	1 cut(s)	2513
HaeIII	GGCC	2 cut(s)	1893, 2346
HapII	CCGG	2 cut(s)	2156, 2413
HgaI	GACGC	1 cut(s)	2678
Hin1II	CATG	8 cut(s)	326, 597, 601, 1533, 2053, 2084, 2166, 2340
HincII	GTYRAC	1 cut(s)	2037
HindII	GTYRAC	1 cut(s)	2037
HindIII	AAGCTT	1 cut(s)	450
HpaII	CCGG	2 cut(s)	2156, 2413
HphI	GGTGA	3 cut(s)	401, 1994, 2145
Hpy166II	GTNNAC	6 cut(s)	648, 1126, 1411, 2037, 2126, 2267
Hpy8I	GTNNAC	6 cut(s)	648, 1126, 1411, 2037, 2126, 2267
HpyAV	CCTTC	6 cut(s)	612, 698, 820, 1162, 2003, 2459
HpyCH4III	ACNGT	7 cut(s)	1123, 1321, 1512, 1817, 2405, 2605, 2677
HpyCH4IV	ACGT	3 cut(s)	1173, 1912, 2263
HpyF10VI	GCNNNNNNNGC	3 cut(s)	38, 1707, 2572
HpyF3I	CTNAG	8 cut(s)	405, 416, 540, 692, 1905, 1929, 2055, 2665
HpySE526I	ACGT	3 cut(s)	1173, 1912, 2263
Hsp92II	CATG	8 cut(s)	326, 597, 601, 1533, 2053, 2084, 2166, 2340
KpnI	GGTACC	1 cut(s)	2162
Kzo9I	GATC	8 cut(s)	13, 640, 717, 1789, 2029, 2213, 2253, 2736
LguI	GCTCTTC	3 cut(s)	364, 415, 2818
LmnI	GCTCC	2 cut(s)	121, 505
Lsp1109I	GCAGC	3 cut(s)	1912, 2430, 2801
MabI	ACCWGGT	1 cut(s)	2206
MaeI	CTAG	7 cut(s)	942, 1046, 1244, 1718, 1977, 2331, 2612
MaeII	ACGT	3 cut(s)	1173, 1912, 2263
MaeIII	GTNAC	9 cut(s)	330, 1152, 1350, 1383, 1437, 1496, 1662, 1908, 2542
MalI	GATC	8 cut(s)	15, 642, 719, 1791, 2031, 2215, 2255, 2738
MboI	GATC	8 cut(s)	13, 640, 717, 1789, 2029, 2213, 2253, 2736
MflI	RGATCY	3 cut(s)	1789, 2029, 2736
MhlI	GDGCHC	5 cut(s)	376, 427, 625, 1644, 1717
MlyI	GAGTC	2 cut(s)	719, 2749
MmeI	TCCRAC	4 cut(s)	560, 818, 1359, 2512
Mph1103I	ATGCAT	2 cut(s)	328, 599
MroXI	GAANNNNTTC	1 cut(s)	1603
MseI	TTAA	5 cut(s)	87, 1560, 1820, 1836, 1877
MslI	CAYNNNNRTG	2 cut(s)	630, 885
MspCI	CTTAAG	1 cut(s)	86
MspI	CCGG	2 cut(s)	2156, 2413
MspR9I	CCNGG	5 cut(s)	701, 1890, 2114, 2208, 2258
Mva1269I	GAATGC	4 cut(s)	1008, 1206, 1586, 2626
MvaI	CCWGG	5 cut(s)	701, 1890, 2114, 2208, 2258
MwoI	GCNNNNNNNGC	3 cut(s)	38, 1707, 2572
NdeII	GATC	8 cut(s)	13, 640, 717, 1789, 2029, 2213, 2253, 2736
NlaIII	CATG	8 cut(s)	326, 597, 601, 1533, 2053, 2084, 2166, 2340
NlaIV	GGNNCC	6 cut(s)	189, 1113, 1311, 1641, 2160, 2411
NmeAIII	GCCGAG	2 cut(s)	467, 2529
NmuCI	GTSAC	5 cut(s)	330, 1152, 1350, 1437, 1662
NsiI	ATGCAT	2 cut(s)	328, 599
NspI	RCATGY	2 cut(s)	326, 2053
NspV	TTCGAA	1 cut(s)	2485
PaqCI	CACCTGC	2 cut(s)	73, 2437
PceI	AGGCCT	1 cut(s)	1893
PciSI	GCTCTTC	3 cut(s)	364, 415, 2818
PctI	GAATGC	4 cut(s)	1008, 1206, 1586, 2626
PdmI	GAANNNNTTC	1 cut(s)	1603
Pfl23II	CGTACG	1 cut(s)	2199
PflMI	CCANNNNNTGG	1 cut(s)	767
PfoI	TCCNGGA	1 cut(s)	2256
PinAI	ACCGGT	1 cut(s)	2155
PkrI	GCNGC	3 cut(s)	1927, 2445, 2816
PleI	GAGTC	2 cut(s)	719, 2749
PpsI	GAGTC	2 cut(s)	719, 2749
Ppu21I	YACGTR	1 cut(s)	1913
PsiI	TTATAA	3 cut(s)	26, 744, 2070
Psp6I	CCWGG	5 cut(s)	699, 1888, 2112, 2206, 2256
PspFI	CCCAGC	1 cut(s)	1644
PspGI	CCWGG	5 cut(s)	699, 1888, 2112, 2206, 2256
PspLI	CGTACG	1 cut(s)	2199
PspN4I	GGNNCC	6 cut(s)	189, 1113, 1311, 1641, 2160, 2411
PstI	CTGCAG	1 cut(s)	2448
PstNI	CAGNNNCTG	1 cut(s)	656
PsuI	RGATCY	3 cut(s)	1789, 2029, 2736
RsaI	GTAC	5 cut(s)	150, 1767, 2104, 2160, 2201
RsaNI	GTAC	5 cut(s)	149, 1766, 2103, 2159, 2200
RseI	CAYNNNNRTG	2 cut(s)	630, 885
SalI	GTCGAC	1 cut(s)	2035
SapI	GCTCTTC	3 cut(s)	364, 415, 2818
SaqAI	TTAA	5 cut(s)	87, 1560, 1820, 1836, 1877
SatI	GCNGC	3 cut(s)	1926, 2444, 2815
Sau3AI	GATC	8 cut(s)	13, 640, 717, 1789, 2029, 2213, 2253, 2736
ScaI	AGTACT	1 cut(s)	150
SchI	GAGTC	2 cut(s)	719, 2749
ScrFI	CCNGG	5 cut(s)	701, 1890, 2114, 2208, 2258
SduI	GDGCHC	5 cut(s)	376, 427, 625, 1644, 1717
SexAI	ACCWGGT	1 cut(s)	2206
SfcI	CTRYAG	4 cut(s)	34, 1593, 2444, 2673
SfuI	TTCGAA	1 cut(s)	2485
SmiMI	CAYNNNNRTG	2 cut(s)	630, 885
SmlI	CTYRAG	1 cut(s)	86
SmoI	CTYRAG	1 cut(s)	86
SnaBI	TACGTA	1 cut(s)	1913
SseBI	AGGCCT	1 cut(s)	1893
SsiI	CCGC	5 cut(s)	427, 472, 688, 1016, 2186
SspI	AATATT	1 cut(s)	1483
SspMI	CTAG	7 cut(s)	942, 1046, 1244, 1718, 1977, 2331, 2612
StuI	AGGCCT	1 cut(s)	1893
StyD4I	CCNGG	5 cut(s)	699, 1888, 2112, 2206, 2256
StyI	CCWWGG	4 cut(s)	192, 348, 2004, 2727
TaaI	ACNGT	7 cut(s)	1123, 1321, 1512, 1817, 2405, 2605, 2677
TaiI	ACGT	3 cut(s)	1176, 1915, 2266
TaqI	TCGA	4 cut(s)	129, 1658, 2036, 2485
TaqII	GACCGA	1 cut(s)	2206
TatI	WGTACW	2 cut(s)	148, 2102
Tru1I	TTAA	5 cut(s)	87, 1560, 1820, 1836, 1877
Tru9I	TTAA	5 cut(s)	87, 1560, 1820, 1836, 1877
TscAI	CASTG	5 cut(s)	1107, 1305, 1717, 2256, 2496
TseFI	GTSAC	5 cut(s)	330, 1152, 1350, 1437, 1662
TseI	GCWGC	3 cut(s)	1925, 2443, 2814
Tsp45I	GTSAC	5 cut(s)	330, 1152, 1350, 1437, 1662
TspDTI	ATGAA	9 cut(s)	17, 59, 123, 445, 1098, 1383, 1511, 1632, 2664
TspGWI	ACGGA	1 cut(s)	449
TspRI	CASTG	5 cut(s)	1107, 1305, 1717, 2256, 2496
Van91I	CCANNNNNTGG	1 cut(s)	767
Vha464I	CTTAAG	1 cut(s)	86
XapI	RAATTY	7 cut(s)	1249, 1849, 1933, 1990, 1998, 2086, 2360
XbaI	TCTAGA	3 cut(s)	941, 1045, 1243
XceI	RCATGY	2 cut(s)	326, 2053
XcmI	CCANNNNNNNNNTGG	3 cut(s)	346, 595, 850
XmiI	GTMKAC	1 cut(s)	2036
XmnI	GAANNNNTTC	1 cut(s)	1603
XspI	CTAG	7 cut(s)	942, 1046, 1244, 1718, 1977, 2331, 2612
ZrmI	AGTACT	1 cut(s)	150
Zsp2I	ATGCAT	2 cut(s)	328, 599

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.