metalloendopeptidase activity
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G42390 AT5G42390 |
| fragaria_vesca | FvH4_1g30291 FvH4_7g03800 FvH4_7g03800 FvH4_7g03800 FvH4_7g03800 FvH4_7g03800 FvH4_7g03800 FvH4_7g03800 |
| malus_domestica | MD00G1159400.v1.1 MD00G1204700.v1.1 |
| prunus_persica | Prupe.7G271900_v2.0.a1 Prupe.7G271900_v2.0.a1 Prupe.7G271900_v2.0.a1 Prupe.7G271900_v2.0.a1 Prupe.7G271900_v2.0.a1 |
| pyrus_communis | pycom290g00010 |
| rosa_chinensis | RchiOBHm_Chr3g0491051 |
| rosa_laevigata | RLG00000022866 |
| rosa_multiflora | Rmu_co8044182.1_g000001 Rmu_ssc0000386.1_g000043 |
| rosa_roxburghii | Rroxscaffold_5G00351210 Rroxscaffold_6G00393270 |
| rosa_rugosa | Rorug03G0245500 Rorug04G0069600 Rorug04G0069700 Rorug04G0070700 Rorug04G0070800 |
| rosa_samantha | Rh3AG295700 Rh3BG331900 Rh3CG329000 Rh3DG329500 |
| rosa_wichuraiana | Rw3G026110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3257 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1914 |
| AatII | GACGTC | 2 cut(s) | 151, 344 |
| Acc16I | TGCGCA | 1 cut(s) | 3138 |
| Acc36I | ACCTGC | 2 cut(s) | 2467, 3029 |
| AccB1I | GGYRCC | 1 cut(s) | 1967 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1695 |
| AccI | GTMKAC | 2 cut(s) | 121, 3630 |
| AccII | CGCG | 2 cut(s) | 762, 996 |
| AciI | CCGC | 7 cut(s) | 5, 82, 644, 949, 1814, 2586, 3215 |
| AclWI | GGATC | 7 cut(s) | 426, 691, 783, 1635, 1902, 2291, 3195 |
| AcoI | YGGCCR | 2 cut(s) | 479, 1216 |
| AcuI | CTGAAG | 2 cut(s) | 1821, 3741 |
| AcyI | GRCGYC | 3 cut(s) | 148, 341, 1968 |
| AdeI | CACNNNGTG | 1 cut(s) | 353 |
| AfaI | GTAC | 8 cut(s) | 472, 847, 1124, 2430, 2610, 2913, 3605, 3674 |
| AfeI | AGCGCT | 1 cut(s) | 2702 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 41, 242, 1195, 1360, 1695, 3740 |
| AflIII | ACRYGT | 2 cut(s) | 733, 1772 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 147 |
| AjnI | CCWGG | 5 cut(s) | 523, 1408, 3243, 3379, 3748 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 907, 939 |
| Alw21I | GWGCWC | 2 cut(s) | 250, 2296 |
| Alw26I | GTCTC | 5 cut(s) | 1894, 2927, 2991, 3316, 3484 |
| AlwI | GGATC | 7 cut(s) | 426, 691, 783, 1635, 1902, 2291, 3195 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3044 |
| Ama87I | CYCGRG | 1 cut(s) | 2346 |
| Aor51HI | AGCGCT | 1 cut(s) | 2702 |
| AoxI | GGCC | 6 cut(s) | 112, 479, 1216, 1294, 1879, 3791 |
| ApaI | GGGCCC | 1 cut(s) | 116 |
| ApeKI | GCWGC | 5 cut(s) | 464, 2024, 2111, 3139, 3614 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 307, 339 |
| AseI | ATTAAT | 2 cut(s) | 1578, 2508 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 304, 1458, 2464 |
| AspLEI | GCGC | 6 cut(s) | 618, 1876, 1970, 2217, 2703, 3139 |
| AspS9I | GGNCC | 8 cut(s) | 44, 112, 113, 164, 446, 1879, 2134, 3041 |
| AsuC2I | CCSGG | 1 cut(s) | 168 |
| AsuHPI | GGTGA | 7 cut(s) | 569, 902, 1775, 2077, 2084, 2224, 3719 |
| AsuII | TTCGAA | 1 cut(s) | 1510 |
| AvaI | CYCGRG | 1 cut(s) | 2346 |
| AvaII | GGWCC | 5 cut(s) | 44, 164, 446, 2134, 3041 |
| AxyI | CCTNAGG | 1 cut(s) | 335 |
| BaeGI | GKGCMC | 1 cut(s) | 116 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1579, 1612 |
| BalI | TGGCCA | 2 cut(s) | 481, 1218 |
| BanI | GGYRCC | 1 cut(s) | 1967 |
| BanII | GRGCYC | 5 cut(s) | 116, 787, 2296, 3243, 3700 |
| BauI | CACGAG | 2 cut(s) | 930, 1724 |
| BbsI | GAAGAC | 1 cut(s) | 320 |
| Bbv12I | GWGCWC | 2 cut(s) | 250, 2296 |
| BbvI | GCAGC | 5 cut(s) | 476, 2036, 2098, 3151, 3601 |
| BccI | CCATC | 7 cut(s) | 59, 479, 580, 819, 2057, 2230, 3345 |
| BceAI | ACGGC | 2 cut(s) | 286, 962 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1358, 1392, 3596, 3630 |
| BciT130I | CCWGG | 5 cut(s) | 525, 1410, 3245, 3381, 3750 |
| BclI | TGATCA | 2 cut(s) | 1339, 3643 |
| BcnI | CCSGG | 1 cut(s) | 168 |
| BcoDI | GTCTC | 5 cut(s) | 1894, 2927, 2991, 3316, 3484 |
| BfaI | CTAG | 6 cut(s) | 279, 1245, 1266, 2289, 3114, 3158 |
| BfmI | CTRYAG | 3 cut(s) | 2022, 2236, 3150 |
| BfoI | RGCGCY | 2 cut(s) | 1971, 2704 |
| BfuAI | ACCTGC | 2 cut(s) | 2467, 3029 |
| BglII | AGATCT | 2 cut(s) | 865, 3589 |
| BisI | GCNGC | 8 cut(s) | 6, 465, 1815, 2025, 2112, 2586, 3140, 3615 |
| BlpI | GCTNAGC | 1 cut(s) | 1040 |
| BlsI | GCNGC | 8 cut(s) | 7, 466, 1816, 2026, 2113, 2587, 3141, 3616 |
| Bme1390I | CCNGG | 6 cut(s) | 168, 525, 1410, 3245, 3381, 3750 |
| Bme18I | GGWCC | 5 cut(s) | 44, 164, 446, 2134, 3041 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 147 |
| BmeT110I | CYCGRG | 1 cut(s) | 2346 |
| BmgT120I | GGNCC | 8 cut(s) | 44, 112, 113, 164, 446, 1879, 2134, 3041 |
| BmiI | GGNNCC | 6 cut(s) | 113, 114, 507, 1052, 1969, 3242 |
| BmrFI | CCNGG | 6 cut(s) | 168, 525, 1410, 3245, 3381, 3750 |
| BmrI | ACTGGG | 1 cut(s) | 3755 |
| BmuI | ACTGGG | 1 cut(s) | 3755 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3722 |
| BpiI | GAAGAC | 1 cut(s) | 320 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1943, 1975 |
| BpmI | CTGGAG | 2 cut(s) | 264, 546 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1281, 2148 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1040 |
| Bpu14I | TTCGAA | 1 cut(s) | 1510 |
| BpuEI | CTTGAG | 4 cut(s) | 419, 515, 2633, 3684 |
| BpuMI | CCSGG | 1 cut(s) | 168 |
| BsaBI | GATNNNNATC | 2 cut(s) | 810, 864 |
| BsaHI | GRCGYC | 3 cut(s) | 148, 341, 1968 |
| BsaJI | CCNNGG | 6 cut(s) | 745, 1408, 1971, 2526, 3205, 3563 |
| BsaWI | WCCGGW | 1 cut(s) | 2953 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2439, 2469, 3361, 3391 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 41, 242, 1195, 1360, 1695, 3740 |
| Bse1I | ACTGG | 6 cut(s) | 247, 1006, 1219, 1306, 3527, 3761 |
| Bse21I | CCTNAGG | 1 cut(s) | 335 |
| Bse3DI | GCAATG | 3 cut(s) | 1266, 2736, 2774 |
| Bse8I | GATNNNNATC | 2 cut(s) | 810, 864 |
| BseBI | CCWGG | 5 cut(s) | 525, 1410, 3245, 3381, 3750 |
| BseDI | CCNNGG | 6 cut(s) | 745, 1408, 1971, 2526, 3205, 3563 |
| BseJI | GATNNNNATC | 2 cut(s) | 810, 864 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 41, 242, 1195, 1360, 1695, 3740 |
| BseMI | GCAATG | 3 cut(s) | 1266, 2736, 2774 |
| BseMII | CTCAG | 8 cut(s) | 152, 349, 2070, 2139, 2928, 3002, 3240, 3492 |
| BseNI | ACTGG | 6 cut(s) | 247, 1006, 1219, 1306, 3527, 3761 |
| BseRI | GAGGAG | 2 cut(s) | 1082, 2885 |
| BseSI | GKGCMC | 1 cut(s) | 116 |
| BseXI | GCAGC | 5 cut(s) | 476, 2036, 2098, 3151, 3601 |
| BseYI | CCCAGC | 2 cut(s) | 1876, 3692 |
| BsgI | GTGCAG | 3 cut(s) | 1007, 1995, 3030 |
| Bsh1236I | CGCG | 2 cut(s) | 762, 996 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2031 |
| BshFI | GGCC | 6 cut(s) | 114, 481, 1218, 1296, 1881, 3793 |
| BshNI | GGYRCC | 1 cut(s) | 1967 |
| BsiEI | CGRYCG | 1 cut(s) | 2031 |
| BsiHKAI | GWGCWC | 2 cut(s) | 250, 2296 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2346 |
| BsiSI | CCGG | 2 cut(s) | 167, 2954 |
| BslFI | GGGAC | 3 cut(s) | 790, 1262, 2873 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 41, 242, 1195, 1360, 1695, 3740 |
| BsmAI | GTCTC | 5 cut(s) | 1894, 2927, 2991, 3316, 3484 |
| BsmFI | GGGAC | 3 cut(s) | 790, 1262, 2873 |
| BsnI | GGCC | 6 cut(s) | 114, 481, 1218, 1296, 1881, 3793 |
| BsoBI | CYCGRG | 1 cut(s) | 2346 |
| Bsp119I | TTCGAA | 1 cut(s) | 1510 |
| Bsp120I | GGGCCC | 1 cut(s) | 112 |
| Bsp1286I | GDGCHC | 6 cut(s) | 116, 250, 787, 2296, 3243, 3700 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1040 |
| BspACI | CCGC | 7 cut(s) | 5, 82, 644, 949, 1814, 2586, 3215 |
| BspANI | GGCC | 6 cut(s) | 114, 481, 1218, 1296, 1881, 3793 |
| BspCNI | CTCAG | 8 cut(s) | 151, 348, 2071, 2140, 2929, 3001, 3241, 3493 |
| BspFNI | CGCG | 2 cut(s) | 762, 996 |
| BspHI | TCATGA | 1 cut(s) | 1111 |
| BspLI | GGNNCC | 6 cut(s) | 113, 114, 507, 1052, 1969, 3242 |
| BspMAI | CTGCAG | 2 cut(s) | 2026, 3154 |
| BspMI | ACCTGC | 2 cut(s) | 2467, 3029 |
| BspPI | GGATC | 7 cut(s) | 426, 691, 783, 1635, 1902, 2291, 3195 |
| BspQI | GCTCTTC | 1 cut(s) | 310 |
| BspT104I | TTCGAA | 1 cut(s) | 1510 |
| BspT107I | GGYRCC | 1 cut(s) | 1967 |
| BsrDI | GCAATG | 3 cut(s) | 1266, 2736, 2774 |
| BsrI | ACTGG | 6 cut(s) | 247, 1006, 1219, 1306, 3527, 3761 |
| BssECI | CCNNGG | 6 cut(s) | 745, 1408, 1971, 2526, 3205, 3563 |
| BssNAI | GTATAC | 1 cut(s) | 3631 |
| BssNI | GRCGYC | 3 cut(s) | 148, 341, 1968 |
| BssSI | CACGAG | 2 cut(s) | 930, 1724 |
| BssT1I | CCWWGG | 3 cut(s) | 745, 1971, 3563 |
| Bst1107I | GTATAC | 1 cut(s) | 3631 |
| Bst2BI | CACGAG | 2 cut(s) | 930, 1724 |
| Bst2UI | CCWGG | 5 cut(s) | 525, 1410, 3245, 3381, 3750 |
| Bst6I | CTCTTC | 5 cut(s) | 188, 310, 693, 1538, 1944 |
| BstACI | GRCGYC | 3 cut(s) | 148, 341, 1968 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 3035, 3044 |
| BstBI | TTCGAA | 1 cut(s) | 1510 |
| BstC8I | GCNNGC | 6 cut(s) | 84, 951, 2219, 2583, 3409, 3549 |
| BstDSI | CCRYGG | 2 cut(s) | 2526, 3205 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1358 |
| BstFNI | CGCG | 2 cut(s) | 762, 996 |
| BstH2I | RGCGCY | 2 cut(s) | 1971, 2704 |
| BstHHI | GCGC | 6 cut(s) | 618, 1876, 1970, 2217, 2703, 3139 |
| BstMAI | GTCTC | 5 cut(s) | 1894, 2927, 2991, 3316, 3484 |
| BstMCI | CGRYCG | 1 cut(s) | 2031 |
| BstNI | CCWGG | 5 cut(s) | 525, 1410, 3245, 3381, 3750 |
| BstNSI | RCATGY | 7 cut(s) | 464, 680, 737, 2060, 2221, 3027, 3411 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3722 |
| BstSCI | CCNGG | 6 cut(s) | 166, 523, 1408, 3243, 3379, 3748 |
| BstSFI | CTRYAG | 3 cut(s) | 2022, 2236, 3150 |
| BstSLI | GKGCMC | 1 cut(s) | 116 |
| BstUI | CGCG | 2 cut(s) | 762, 996 |
| BstV1I | GCAGC | 5 cut(s) | 476, 2036, 2098, 3151, 3601 |
| BstV2I | GAAGAC | 1 cut(s) | 320 |
| BstX2I | RGATCY | 4 cut(s) | 418, 865, 3187, 3589 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 1226, 1978, 2828, 3057 |
| BstYI | RGATCY | 4 cut(s) | 418, 865, 3187, 3589 |
| BstZ17I | GTATAC | 1 cut(s) | 3631 |
| Bsu36I | CCTNAGG | 1 cut(s) | 335 |
| BsuRI | GGCC | 6 cut(s) | 114, 481, 1218, 1296, 1881, 3793 |
| BtgI | CCRYGG | 2 cut(s) | 2526, 3205 |
| BtsI | GCAGTG | 1 cut(s) | 2817 |
| BtsIMutI | CAGTG | 5 cut(s) | 825, 1371, 1671, 2817, 3099 |
| BveI | ACCTGC | 2 cut(s) | 2467, 3029 |
| Cac8I | GCNNGC | 6 cut(s) | 84, 951, 2219, 2583, 3409, 3549 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3044 |
| CciI | TCATGA | 1 cut(s) | 1111 |
| CfoI | GCGC | 6 cut(s) | 618, 1876, 1970, 2217, 2703, 3139 |
| Cfr13I | GGNCC | 8 cut(s) | 44, 112, 113, 164, 446, 1879, 2134, 3041 |
| CseI | GACGC | 1 cut(s) | 3487 |
| Csp6I | GTAC | 8 cut(s) | 471, 846, 1123, 2429, 2609, 2912, 3604, 3673 |
| CviQI | GTAC | 8 cut(s) | 471, 846, 1123, 2429, 2609, 2912, 3604, 3673 |
| DinI | GGCGCC | 1 cut(s) | 1969 |
| DraIII | CACNNNGTG | 1 cut(s) | 353 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1914 |
| DriI | GACNNNNNGTC | 1 cut(s) | 147 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1914 |
| EaeI | YGGCCR | 2 cut(s) | 479, 1216 |
| Eam1104I | CTCTTC | 5 cut(s) | 188, 310, 693, 1538, 1944 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 147 |
| EarI | CTCTTC | 5 cut(s) | 188, 310, 693, 1538, 1944 |
| EciI | GGCGGA | 1 cut(s) | 633 |
| Ecl136II | GAGCTC | 1 cut(s) | 2294 |
| Eco130I | CCWWGG | 3 cut(s) | 745, 1971, 3563 |
| Eco24I | GRGCYC | 5 cut(s) | 116, 787, 2296, 3243, 3700 |
| Eco32I | GATATC | 1 cut(s) | 2181 |
| Eco47I | GGWCC | 5 cut(s) | 44, 164, 446, 2134, 3041 |
| Eco47III | AGCGCT | 1 cut(s) | 2702 |
| Eco53kI | GAGCTC | 1 cut(s) | 2294 |
| Eco57I | CTGAAG | 2 cut(s) | 1821, 3741 |
| Eco81I | CCTNAGG | 1 cut(s) | 335 |
| Eco88I | CYCGRG | 1 cut(s) | 2346 |
| EcoICRI | GAGCTC | 1 cut(s) | 2294 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1358 |
| EcoO109I | RGGNCCY | 4 cut(s) | 112, 113, 2134, 3041 |
| EcoRI | GAATTC | 2 cut(s) | 91, 2549 |
| EcoRII | CCWGG | 5 cut(s) | 523, 1408, 3243, 3379, 3748 |
| EcoRV | GATATC | 1 cut(s) | 2181 |
| EcoT14I | CCWWGG | 3 cut(s) | 745, 1971, 3563 |
| EcoT22I | ATGCAT | 3 cut(s) | 1425, 2641, 3409 |
| EcoT38I | GRGCYC | 5 cut(s) | 116, 787, 2296, 3243, 3700 |
| EgeI | GGCGCC | 1 cut(s) | 1969 |
| EheI | GGCGCC | 1 cut(s) | 1969 |
| ErhI | CCWWGG | 3 cut(s) | 745, 1971, 3563 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 460, 492, 855, 887 |
| FaqI | GGGAC | 3 cut(s) | 790, 1262, 2873 |
| FauI | CCCGC | 2 cut(s) | 75, 942 |
| FauNDI | CATATG | 5 cut(s) | 433, 723, 1516, 3304, 3640 |
| FbaI | TGATCA | 2 cut(s) | 1339, 3643 |
| FblI | GTMKAC | 2 cut(s) | 121, 3630 |
| Fnu4HI | GCNGC | 8 cut(s) | 6, 465, 1815, 2025, 2112, 2586, 3140, 3615 |
| FriOI | GRGCYC | 5 cut(s) | 116, 787, 2296, 3243, 3700 |
| Fsp4HI | GCNGC | 8 cut(s) | 6, 465, 1815, 2025, 2112, 2586, 3140, 3615 |
| FspBI | CTAG | 6 cut(s) | 279, 1245, 1266, 2289, 3114, 3158 |
| FspI | TGCGCA | 1 cut(s) | 3138 |
| GlaI | GCGC | 6 cut(s) | 617, 1875, 1969, 2216, 2702, 3138 |
| GluI | GCNGC | 8 cut(s) | 6, 465, 1815, 2025, 2112, 2586, 3140, 3615 |
| GsaI | CCCAGC | 2 cut(s) | 1880, 3696 |
| GsuI | CTGGAG | 2 cut(s) | 264, 546 |
| HaeII | RGCGCY | 2 cut(s) | 1971, 2704 |
| HaeIII | GGCC | 6 cut(s) | 114, 481, 1218, 1296, 1881, 3793 |
| HapII | CCGG | 2 cut(s) | 167, 2954 |
| HgaI | GACGC | 1 cut(s) | 3487 |
| HhaI | GCGC | 6 cut(s) | 618, 1876, 1970, 2217, 2703, 3139 |
| Hin1I | GRCGYC | 3 cut(s) | 148, 341, 1968 |
| Hin6I | GCGC | 6 cut(s) | 616, 1874, 1968, 2215, 2701, 3137 |
| HinP1I | GCGC | 6 cut(s) | 616, 1874, 1968, 2215, 2701, 3137 |
| HincII | GTYRAC | 3 cut(s) | 1000, 1957, 3073 |
| HindII | GTYRAC | 3 cut(s) | 1000, 1957, 3073 |
| HindIII | AAGCTT | 3 cut(s) | 1283, 2692, 3549 |
| HpaI | GTTAAC | 1 cut(s) | 1957 |
| HpaII | CCGG | 2 cut(s) | 167, 2954 |
| HphI | GGTGA | 7 cut(s) | 569, 902, 1775, 2077, 2084, 2224, 3719 |
| Hpy99I | CGWCG | 2 cut(s) | 695, 3280 |
| HpyCH4IV | ACGT | 4 cut(s) | 148, 341, 1774, 3627 |
| HpySE526I | ACGT | 4 cut(s) | 148, 341, 1774, 3627 |
| Hsp92I | GRCGYC | 3 cut(s) | 148, 341, 1968 |
| HspAI | GCGC | 6 cut(s) | 616, 1874, 1968, 2215, 2701, 3137 |
| KasI | GGCGCC | 1 cut(s) | 1967 |
| Ksp22I | TGATCA | 2 cut(s) | 1339, 3643 |
| KspAI | GTTAAC | 1 cut(s) | 1957 |
| LguI | GCTCTTC | 1 cut(s) | 310 |
| LmnI | GCTCC | 9 cut(s) | 245, 505, 1069, 2212, 2473, 2684, 2698, 3246, 3457 |
| Lsp1109I | GCAGC | 5 cut(s) | 476, 2036, 2098, 3151, 3601 |
| MaeI | CTAG | 6 cut(s) | 279, 1245, 1266, 2289, 3114, 3158 |
| MaeII | ACGT | 4 cut(s) | 148, 341, 1774, 3627 |
| MaeIII | GTNAC | 7 cut(s) | 1401, 1634, 1660, 1675, 1753, 1939, 3367 |
| MfeI | CAATTG | 3 cut(s) | 1617, 2594, 3647 |
| MflI | RGATCY | 4 cut(s) | 418, 865, 3187, 3589 |
| MhlI | GDGCHC | 6 cut(s) | 116, 250, 787, 2296, 3243, 3700 |
| MlsI | TGGCCA | 2 cut(s) | 481, 1218 |
| MluNI | TGGCCA | 2 cut(s) | 481, 1218 |
| Mly113I | GGCGCC | 1 cut(s) | 1968 |
| MlyI | GAGTC | 4 cut(s) | 1631, 2531, 2891, 3101 |
| MmeI | TCCRAC | 5 cut(s) | 71, 411, 1959, 2437, 2715 |
| Mox20I | TGGCCA | 2 cut(s) | 481, 1218 |
| Mph1103I | ATGCAT | 3 cut(s) | 1425, 2641, 3409 |
| MroXI | GAANNNNTTC | 3 cut(s) | 304, 1458, 2464 |
| MscI | TGGCCA | 2 cut(s) | 481, 1218 |
| MseI | TTAA | 9 cut(s) | 1077, 1356, 1476, 1578, 1793, 1956, 2508, 2564, 2786 |
| MslI | CAYNNNNRTG | 3 cut(s) | 671, 2061, 3233 |
| Msp20I | TGGCCA | 2 cut(s) | 481, 1218 |
| MspA1I | CMGCKG | 2 cut(s) | 2111, 3142 |
| MspI | CCGG | 2 cut(s) | 167, 2954 |
| MspR9I | CCNGG | 6 cut(s) | 168, 525, 1410, 3245, 3381, 3750 |
| MunI | CAATTG | 3 cut(s) | 1617, 2594, 3647 |
| MvaI | CCWGG | 5 cut(s) | 525, 1410, 3245, 3381, 3750 |
| MvnI | CGCG | 2 cut(s) | 762, 996 |
| NarI | GGCGCC | 1 cut(s) | 1968 |
| NciI | CCSGG | 1 cut(s) | 168 |
| NdeI | CATATG | 5 cut(s) | 433, 723, 1516, 3304, 3640 |
| NlaIV | GGNNCC | 6 cut(s) | 113, 114, 507, 1052, 1969, 3242 |
| NmuCI | GTSAC | 4 cut(s) | 1401, 1634, 1660, 1939 |
| NsbI | TGCGCA | 1 cut(s) | 3138 |
| NsiI | ATGCAT | 3 cut(s) | 1425, 2641, 3409 |
| NspI | RCATGY | 7 cut(s) | 464, 680, 737, 2060, 2221, 3027, 3411 |
| NspV | TTCGAA | 1 cut(s) | 1510 |
| PaeI | GCATGC | 2 cut(s) | 2221, 3411 |
| PagI | TCATGA | 1 cut(s) | 1111 |
| PciI | ACATGT | 1 cut(s) | 733 |
| PciSI | GCTCTTC | 1 cut(s) | 310 |
| PdmI | GAANNNNTTC | 3 cut(s) | 304, 1458, 2464 |
| PfeI | GAWTC | 8 cut(s) | 854, 1459, 1492, 2402, 2497, 3287, 3343, 3665 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1695 |
| PfoI | TCCNGGA | 1 cut(s) | 523 |
| PkrI | GCNGC | 8 cut(s) | 7, 466, 1816, 2026, 2113, 2587, 3141, 3616 |
| Ple19I | CGATCG | 1 cut(s) | 2031 |
| PleI | GAGTC | 4 cut(s) | 1631, 2530, 2890, 3100 |
| PluTI | GGCGCC | 1 cut(s) | 1971 |
| PpsI | GAGTC | 4 cut(s) | 1631, 2530, 2890, 3100 |
| PpuMI | RGGWCCY | 2 cut(s) | 2134, 3041 |
| PscI | ACATGT | 1 cut(s) | 733 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3722 |
| PshBI | ATTAAT | 2 cut(s) | 1578, 2508 |
| PsiI | TTATAA | 1 cut(s) | 3257 |
| Psp124BI | GAGCTC | 1 cut(s) | 2296 |
| Psp5II | RGGWCCY | 2 cut(s) | 2134, 3041 |
| Psp6I | CCWGG | 5 cut(s) | 523, 1408, 3243, 3379, 3748 |
| PspFI | CCCAGC | 2 cut(s) | 1876, 3692 |
| PspGI | CCWGG | 5 cut(s) | 523, 1408, 3243, 3379, 3748 |
| PspN4I | GGNNCC | 6 cut(s) | 113, 114, 507, 1052, 1969, 3242 |
| PspOMI | GGGCCC | 1 cut(s) | 112 |
| PspPI | GGNCC | 8 cut(s) | 44, 112, 113, 164, 446, 1879, 2134, 3041 |
| PspPPI | RGGWCCY | 2 cut(s) | 2134, 3041 |
| PstI | CTGCAG | 2 cut(s) | 2026, 3154 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3044 |
| PsuI | RGATCY | 4 cut(s) | 418, 865, 3187, 3589 |
| PvuI | CGATCG | 1 cut(s) | 2031 |
| PvuII | CAGCTG | 2 cut(s) | 2111, 3142 |
| RsaI | GTAC | 8 cut(s) | 472, 847, 1124, 2430, 2610, 2913, 3605, 3674 |
| RsaNI | GTAC | 8 cut(s) | 471, 846, 1123, 2429, 2609, 2912, 3604, 3673 |
| RseI | CAYNNNNRTG | 3 cut(s) | 671, 2061, 3233 |
| SacI | GAGCTC | 1 cut(s) | 2296 |
| SapI | GCTCTTC | 1 cut(s) | 310 |
| SaqAI | TTAA | 9 cut(s) | 1077, 1356, 1476, 1578, 1793, 1956, 2508, 2564, 2786 |
| SatI | GCNGC | 8 cut(s) | 6, 465, 1815, 2025, 2112, 2586, 3140, 3615 |
| Sau96I | GGNCC | 8 cut(s) | 44, 112, 113, 164, 446, 1879, 2134, 3041 |
| SchI | GAGTC | 4 cut(s) | 1631, 2531, 2891, 3101 |
| ScrFI | CCNGG | 6 cut(s) | 168, 525, 1410, 3245, 3381, 3750 |
| SduI | GDGCHC | 6 cut(s) | 116, 250, 787, 2296, 3243, 3700 |
| SfcI | CTRYAG | 3 cut(s) | 2022, 2236, 3150 |
| SfoI | GGCGCC | 1 cut(s) | 1969 |
| SfuI | TTCGAA | 1 cut(s) | 1510 |
| SinI | GGWCC | 5 cut(s) | 44, 164, 446, 2134, 3041 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 671, 2061, 3233 |
| SmlI | CTYRAG | 4 cut(s) | 398, 494, 2612, 3699 |
| SmoI | CTYRAG | 4 cut(s) | 398, 494, 2612, 3699 |
| SphI | GCATGC | 2 cut(s) | 2221, 3411 |
| SsiI | CCGC | 7 cut(s) | 5, 82, 644, 949, 1814, 2586, 3215 |
| SspDI | GGCGCC | 1 cut(s) | 1967 |
| SspI | AATATT | 1 cut(s) | 1551 |
| SspMI | CTAG | 6 cut(s) | 279, 1245, 1266, 2289, 3114, 3158 |
| SstI | GAGCTC | 1 cut(s) | 2296 |
| StyD4I | CCNGG | 6 cut(s) | 166, 523, 1408, 3243, 3379, 3748 |
| StyI | CCWWGG | 3 cut(s) | 745, 1971, 3563 |
| TaiI | ACGT | 4 cut(s) | 151, 344, 1777, 3630 |
| TaqI | TCGA | 9 cut(s) | 592, 690, 787, 1510, 2880, 2965, 3095, 3318, 3726 |
| TatI | WGTACW | 4 cut(s) | 470, 845, 2911, 3672 |
| TauI | GCSGC | 3 cut(s) | 8, 1817, 2588 |
| TfiI | GAWTC | 8 cut(s) | 854, 1459, 1492, 2402, 2497, 3287, 3343, 3665 |
| Tru1I | TTAA | 9 cut(s) | 1077, 1356, 1476, 1578, 1793, 1956, 2508, 2564, 2786 |
| Tru9I | TTAA | 9 cut(s) | 1077, 1356, 1476, 1578, 1793, 1956, 2508, 2564, 2786 |
| TscAI | CASTG | 5 cut(s) | 825, 1378, 1678, 2817, 3106 |
| TseFI | GTSAC | 4 cut(s) | 1401, 1634, 1660, 1939 |
| TseI | GCWGC | 5 cut(s) | 464, 2024, 2111, 3139, 3614 |
| Tsp45I | GTSAC | 4 cut(s) | 1401, 1634, 1660, 1939 |
| TspGWI | ACGGA | 4 cut(s) | 2543, 2543, 3194, 3490 |
| TspRI | CASTG | 5 cut(s) | 825, 1378, 1678, 2817, 3106 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1695 |
| VpaK11BI | GGWCC | 5 cut(s) | 44, 164, 446, 2134, 3041 |
| VspI | ATTAAT | 2 cut(s) | 1578, 2508 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1358 |
| XceI | RCATGY | 7 cut(s) | 464, 680, 737, 2060, 2221, 3027, 3411 |
| XmiI | GTMKAC | 2 cut(s) | 121, 3630 |
| XmnI | GAANNNNTTC | 3 cut(s) | 304, 1458, 2464 |
| XspI | CTAG | 6 cut(s) | 279, 1245, 1266, 2289, 3114, 3158 |
| ZraI | GACGTC | 2 cut(s) | 149, 342 |
| Zsp2I | ATGCAT | 3 cut(s) | 1425, 2641, 3409 |