ubiquitin-protein transferase activity
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g07901 FvH4_2g07910 |
| malus_domestica | MD00G1051600.v1.1 MD05G1071800.v1.1 MD10G1083000.v1.1 MD10G1083100.v1.1 MD12G1121000.v1.1 |
| prunus_persica | Prupe.8G106000_v2.0.a1 Prupe.8G106100_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr6g0262371 |
| rosa_laevigata | RLG00000014434 RLG00000014436 |
| rosa_multiflora | Rmu_sc0001544.1_g000008 Rmu_sc0001544.1_g000017 |
| rosa_roxburghii | Rroxscaffold_7G00208000 Rroxscaffold_7G00208010 |
| rosa_rugosa | Rorug05G0596500 Rorug05G0596500 |
| rosa_samantha | Rh6AG117100 Rh6AG117200 Rh6BG111100 Rh6BG111200 Rh6CG108700 Rh6CG108800 |
| rosa_wichuraiana | Rw6G010170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 73 |
| AciI | CCGC | 1 cut(s) | 505 |
| AcoI | YGGCCR | 1 cut(s) | 473 |
| AcsI | RAATTY | 2 cut(s) | 395, 458 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 73 |
| AflIII | ACRYGT | 1 cut(s) | 517 |
| AgsI | TTSAA | 1 cut(s) | 164 |
| AluBI | AGCT | 3 cut(s) | 220, 375, 514 |
| AluI | AGCT | 3 cut(s) | 220, 375, 514 |
| Alw21I | GWGCWC | 1 cut(s) | 99 |
| Alw26I | GTCTC | 1 cut(s) | 526 |
| AoxI | GGCC | 2 cut(s) | 288, 473 |
| ApeKI | GCWGC | 1 cut(s) | 375 |
| ApoI | RAATTY | 2 cut(s) | 395, 458 |
| AspS9I | GGNCC | 2 cut(s) | 79, 288 |
| AsuHPI | GGTGA | 4 cut(s) | 25, 91, 310, 374 |
| AvaII | GGWCC | 1 cut(s) | 79 |
| Bbv12I | GWGCWC | 1 cut(s) | 99 |
| BbvI | GCAGC | 1 cut(s) | 362 |
| BccI | CCATC | 1 cut(s) | 407 |
| BcoDI | GTCTC | 1 cut(s) | 526 |
| BfaI | CTAG | 1 cut(s) | 197 |
| BisI | GCNGC | 2 cut(s) | 376, 505 |
| BlsI | GCNGC | 2 cut(s) | 377, 506 |
| Bme18I | GGWCC | 1 cut(s) | 79 |
| BmgT120I | GGNCC | 2 cut(s) | 79, 288 |
| BmiI | GGNNCC | 2 cut(s) | 81, 175 |
| BmsI | GCATC | 1 cut(s) | 267 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 362, 394 |
| BpuEI | CTTGAG | 2 cut(s) | 223, 266 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 73 |
| Bse1I | ACTGG | 1 cut(s) | 67 |
| BseGI | GGATG | 2 cut(s) | 282, 418 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 73 |
| BseMII | CTCAG | 2 cut(s) | 101, 516 |
| BseNI | ACTGG | 1 cut(s) | 67 |
| BseRI | GAGGAG | 2 cut(s) | 323, 332 |
| BseXI | GCAGC | 1 cut(s) | 362 |
| BshFI | GGCC | 2 cut(s) | 290, 475 |
| BsiHKAI | GWGCWC | 1 cut(s) | 99 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 73 |
| BsmAI | GTCTC | 1 cut(s) | 526 |
| BsnI | GGCC | 2 cut(s) | 290, 475 |
| Bsp1286I | GDGCHC | 1 cut(s) | 99 |
| Bsp143I | GATC | 3 cut(s) | 112, 184, 354 |
| BspACI | CCGC | 1 cut(s) | 505 |
| BspANI | GGCC | 2 cut(s) | 290, 475 |
| BspCNI | CTCAG | 2 cut(s) | 100, 517 |
| BspLI | GGNNCC | 2 cut(s) | 81, 175 |
| BsrI | ACTGG | 1 cut(s) | 67 |
| BssMI | GATC | 3 cut(s) | 112, 184, 354 |
| Bst6I | CTCTTC | 1 cut(s) | 138 |
| BstC8I | GCNNGC | 2 cut(s) | 437, 441 |
| BstDEI | CTNAG | 2 cut(s) | 87, 525 |
| BstF5I | GGATG | 2 cut(s) | 282, 418 |
| BstKTI | GATC | 3 cut(s) | 115, 187, 357 |
| BstMAI | GTCTC | 1 cut(s) | 526 |
| BstMBI | GATC | 3 cut(s) | 112, 184, 354 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 103, 436, 501 |
| BstNSI | RCATGY | 1 cut(s) | 521 |
| BstV1I | GCAGC | 1 cut(s) | 362 |
| BsuRI | GGCC | 2 cut(s) | 290, 475 |
| BtsCI | GGATG | 2 cut(s) | 282, 418 |
| Cac8I | GCNNGC | 2 cut(s) | 437, 441 |
| Cfr13I | GGNCC | 2 cut(s) | 79, 288 |
| CviAII | CATG | 4 cut(s) | 232, 432, 449, 518 |
| CviJI | RGCY | 8 cut(s) | 9, 91, 200, 220, 290, 375, 475, 514 |
| CviKI_1 | RGCY | 8 cut(s) | 9, 91, 200, 220, 290, 375, 475, 514 |
| DdeI | CTNAG | 2 cut(s) | 87, 525 |
| DpnI | GATC | 3 cut(s) | 114, 186, 356 |
| DpnII | GATC | 3 cut(s) | 112, 184, 354 |
| EaeI | YGGCCR | 1 cut(s) | 473 |
| Eam1104I | CTCTTC | 1 cut(s) | 138 |
| EarI | CTCTTC | 1 cut(s) | 138 |
| Eco47I | GGWCC | 1 cut(s) | 79 |
| EcoO109I | RGGNCCY | 1 cut(s) | 79 |
| EcoRI | GAATTC | 1 cut(s) | 458 |
| FaeI | CATG | 4 cut(s) | 235, 435, 452, 521 |
| FatI | CATG | 4 cut(s) | 231, 431, 448, 517 |
| Fnu4HI | GCNGC | 2 cut(s) | 376, 505 |
| FokI | GGATG | 2 cut(s) | 289, 425 |
| Fsp4HI | GCNGC | 2 cut(s) | 376, 505 |
| FspBI | CTAG | 1 cut(s) | 197 |
| GluI | GCNGC | 2 cut(s) | 376, 505 |
| HaeIII | GGCC | 2 cut(s) | 290, 475 |
| Hin1II | CATG | 4 cut(s) | 235, 435, 452, 521 |
| HinfI | GANTC | 1 cut(s) | 322 |
| HphI | GGTGA | 4 cut(s) | 25, 91, 310, 374 |
| Hpy188I | TCNGA | 2 cut(s) | 178, 526 |
| Hpy188III | TCNNGA | 3 cut(s) | 116, 283, 332 |
| HpyAV | CCTTC | 1 cut(s) | 93 |
| HpyCH4V | TGCA | 1 cut(s) | 257 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 103, 436, 501 |
| HpyF3I | CTNAG | 2 cut(s) | 87, 525 |
| Hsp92II | CATG | 4 cut(s) | 235, 435, 452, 521 |
| Kzo9I | GATC | 3 cut(s) | 112, 184, 354 |
| LpnPI | CCDG | 4 cut(s) | 80, 92, 105, 304 |
| Lsp1109I | GCAGC | 1 cut(s) | 362 |
| LweI | GCATC | 1 cut(s) | 267 |
| MaeI | CTAG | 1 cut(s) | 197 |
| MaeIII | GTNAC | 1 cut(s) | 400 |
| MalI | GATC | 3 cut(s) | 114, 186, 356 |
| MboI | GATC | 3 cut(s) | 112, 184, 354 |
| MboII | GAAGA | 3 cut(s) | 122, 155, 351 |
| MhlI | GDGCHC | 1 cut(s) | 99 |
| MluCI | AATT | 6 cut(s) | 42, 123, 159, 263, 395, 458 |
| MmeI | TCCRAC | 1 cut(s) | 201 |
| MnlI | CCTC | 8 cut(s) | 70, 267, 279, 301, 310, 339, 385, 520 |
| MseI | TTAA | 1 cut(s) | 150 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 103, 436, 501 |
| NdeII | GATC | 3 cut(s) | 112, 184, 354 |
| NlaIII | CATG | 4 cut(s) | 235, 435, 452, 521 |
| NlaIV | GGNNCC | 2 cut(s) | 81, 175 |
| NmeAIII | GCCGAG | 1 cut(s) | 501 |
| NspI | RCATGY | 1 cut(s) | 521 |
| PciI | ACATGT | 1 cut(s) | 517 |
| PfeI | GAWTC | 1 cut(s) | 322 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 73 |
| PkrI | GCNGC | 2 cut(s) | 377, 506 |
| PpuMI | RGGWCCY | 1 cut(s) | 79 |
| PscI | ACATGT | 1 cut(s) | 517 |
| Psp5II | RGGWCCY | 1 cut(s) | 79 |
| PspN4I | GGNNCC | 2 cut(s) | 81, 175 |
| PspPI | GGNCC | 2 cut(s) | 79, 288 |
| PspPPI | RGGWCCY | 1 cut(s) | 79 |
| SaqAI | TTAA | 1 cut(s) | 150 |
| SatI | GCNGC | 2 cut(s) | 376, 505 |
| Sau3AI | GATC | 3 cut(s) | 112, 184, 354 |
| Sau96I | GGNCC | 2 cut(s) | 79, 288 |
| SduI | GDGCHC | 1 cut(s) | 99 |
| SetI | ASST | 7 cut(s) | 38, 64, 175, 222, 364, 377, 516 |
| SfaNI | GCATC | 1 cut(s) | 267 |
| SinI | GGWCC | 1 cut(s) | 79 |
| SmlI | CTYRAG | 2 cut(s) | 202, 281 |
| SmoI | CTYRAG | 2 cut(s) | 202, 281 |
| Sse9I | AATT | 6 cut(s) | 42, 123, 159, 263, 395, 458 |
| SsiI | CCGC | 1 cut(s) | 505 |
| SspMI | CTAG | 1 cut(s) | 197 |
| TaqI | TCGA | 3 cut(s) | 141, 187, 331 |
| TasI | AATT | 6 cut(s) | 42, 123, 159, 263, 395, 458 |
| TauI | GCSGC | 1 cut(s) | 507 |
| TfiI | GAWTC | 1 cut(s) | 322 |
| Tru1I | TTAA | 1 cut(s) | 150 |
| Tru9I | TTAA | 1 cut(s) | 150 |
| TseI | GCWGC | 1 cut(s) | 375 |
| TspDTI | ATGAA | 5 cut(s) | 54, 220, 230, 437, 451 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 73 |
| VpaK11BI | GGWCC | 1 cut(s) | 79 |
| XapI | RAATTY | 2 cut(s) | 395, 458 |
| XceI | RCATGY | 1 cut(s) | 521 |
| XspI | CTAG | 1 cut(s) | 197 |