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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G01580 AT3G07510 AT3G07510 AT3G07510 |
| fragaria_vesca | FvH4_2g17600 FvH4_2g17600 |
| malus_domestica | MD05G1155400.v1.1 MD05G1155900.v1.1 MD05G1156100.v1.1 MD10G1149800.v1.1 |
| prunus_persica | Prupe.8G188200_v2.0.a1 |
| pyrus_communis | pycom10g12920 |
| rosa_chinensis | RchiOBHm_Chr6g0282541 |
| rosa_laevigata | RLG00000012886 |
| rosa_multiflora | Rmu_co8275275.1_g000001 Rmu_sc0005697.1_g000012 |
| rosa_roxburghii | Rroxscaffold_7G00186280 |
| rosa_rugosa | Rorug06G0147400 |
| rosa_samantha | Rh6AG260600 Rh6BG263800 |
| rosa_wichuraiana | Rw6G022540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 61, 113 |
| AatII | GACGTC | 1 cut(s) | 336 |
| AccI | GTMKAC | 1 cut(s) | 336 |
| AciI | CCGC | 3 cut(s) | 99, 494, 509 |
| AclWI | GGATC | 3 cut(s) | 399, 412, 451 |
| AcoI | YGGCCR | 2 cut(s) | 40, 225 |
| AcuI | CTGAAG | 1 cut(s) | 244 |
| AcyI | GRCGYC | 2 cut(s) | 210, 333 |
| AfaI | GTAC | 1 cut(s) | 20 |
| AjiI | CACGTC | 2 cut(s) | 94, 223 |
| AjnI | CCWGG | 3 cut(s) | 102, 111, 291 |
| AluBI | AGCT | 4 cut(s) | 235, 264, 304, 531 |
| AluI | AGCT | 4 cut(s) | 235, 264, 304, 531 |
| Alw26I | GTCTC | 1 cut(s) | 259 |
| AlwI | GGATC | 3 cut(s) | 399, 412, 451 |
| Ama87I | CYCGRG | 1 cut(s) | 188 |
| AoxI | GGCC | 7 cut(s) | 40, 109, 154, 225, 295, 342, 351 |
| ApaI | GGGCCC | 1 cut(s) | 355 |
| AspLEI | GCGC | 1 cut(s) | 538 |
| AspS9I | GGNCC | 5 cut(s) | 154, 295, 351, 352, 370 |
| AsuC2I | CCSGG | 3 cut(s) | 39, 174, 350 |
| AsuHPI | GGTGA | 3 cut(s) | 88, 127, 454 |
| AvaI | CYCGRG | 1 cut(s) | 188 |
| AvaII | GGWCC | 1 cut(s) | 370 |
| AxyI | CCTNAGG | 1 cut(s) | 374 |
| BaeGI | GKGCMC | 1 cut(s) | 355 |
| BalI | TGGCCA | 1 cut(s) | 227 |
| BamHI | GGATCC | 1 cut(s) | 404 |
| BanII | GRGCYC | 1 cut(s) | 355 |
| BbsI | GAAGAC | 2 cut(s) | 139, 235 |
| BccI | CCATC | 3 cut(s) | 146, 317, 433 |
| BceAI | ACGGC | 1 cut(s) | 124 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 316, 350 |
| BciT130I | CCWGG | 3 cut(s) | 104, 113, 293 |
| BcnI | CCSGG | 3 cut(s) | 39, 174, 350 |
| BcoDI | GTCTC | 1 cut(s) | 259 |
| BfaI | CTAG | 1 cut(s) | 580 |
| BfoI | RGCGCY | 1 cut(s) | 539 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 350 |
| BisI | GCNGC | 1 cut(s) | 510 |
| BlsI | GCNGC | 1 cut(s) | 511 |
| Bme1390I | CCNGG | 6 cut(s) | 39, 104, 113, 174, 293, 350 |
| Bme18I | GGWCC | 1 cut(s) | 370 |
| BmeT110I | CYCGRG | 1 cut(s) | 188 |
| BmgBI | CACGTC | 2 cut(s) | 94, 223 |
| BmgT120I | GGNCC | 5 cut(s) | 154, 295, 351, 352, 370 |
| BmiI | GGNNCC | 2 cut(s) | 353, 406 |
| BmrFI | CCNGG | 6 cut(s) | 39, 104, 113, 174, 293, 350 |
| BpiI | GAAGAC | 2 cut(s) | 139, 235 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 239, 271 |
| BpuEI | CTTGAG | 2 cut(s) | 284, 350 |
| BpuMI | CCSGG | 3 cut(s) | 39, 174, 350 |
| BsaBI | GATNNNNATC | 1 cut(s) | 455 |
| BsaHI | GRCGYC | 2 cut(s) | 210, 333 |
| BsaJI | CCNNGG | 4 cut(s) | 37, 102, 291, 292 |
| BsaWI | WCCGGW | 1 cut(s) | 459 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 110, 140 |
| Bse118I | RCCGGY | 1 cut(s) | 212 |
| Bse21I | CCTNAGG | 1 cut(s) | 374 |
| Bse3DI | GCAATG | 1 cut(s) | 223 |
| Bse8I | GATNNNNATC | 1 cut(s) | 455 |
| BseBI | CCWGG | 3 cut(s) | 104, 113, 293 |
| BseDI | CCNNGG | 4 cut(s) | 37, 102, 291, 292 |
| BseGI | GGATG | 4 cut(s) | 10, 74, 390, 474 |
| BseJI | GATNNNNATC | 1 cut(s) | 455 |
| BseMI | GCAATG | 1 cut(s) | 223 |
| BseMII | CTCAG | 1 cut(s) | 388 |
| BseSI | GKGCMC | 1 cut(s) | 355 |
| BshFI | GGCC | 7 cut(s) | 42, 111, 156, 227, 297, 344, 353 |
| BsiHKCI | CYCGRG | 1 cut(s) | 188 |
| BsiSI | CCGG | 5 cut(s) | 39, 173, 213, 349, 460 |
| BslFI | GGGAC | 3 cut(s) | 145, 189, 265 |
| BsmAI | GTCTC | 1 cut(s) | 259 |
| BsmFI | GGGAC | 3 cut(s) | 145, 189, 265 |
| BsnI | GGCC | 7 cut(s) | 42, 111, 156, 227, 297, 344, 353 |
| BsoBI | CYCGRG | 1 cut(s) | 188 |
| Bsp120I | GGGCCC | 1 cut(s) | 351 |
| Bsp1286I | GDGCHC | 1 cut(s) | 355 |
| Bsp143I | GATC | 3 cut(s) | 285, 404, 456 |
| BspACI | CCGC | 3 cut(s) | 99, 494, 509 |
| BspANI | GGCC | 7 cut(s) | 42, 111, 156, 227, 297, 344, 353 |
| BspCNI | CTCAG | 1 cut(s) | 387 |
| BspLI | GGNNCC | 2 cut(s) | 353, 406 |
| BspPI | GGATC | 3 cut(s) | 399, 412, 451 |
| BsrDI | GCAATG | 1 cut(s) | 223 |
| BsrFI | RCCGGY | 1 cut(s) | 212 |
| BssAI | RCCGGY | 1 cut(s) | 212 |
| BssECI | CCNNGG | 4 cut(s) | 37, 102, 291, 292 |
| BssMI | GATC | 3 cut(s) | 285, 404, 456 |
| BssNI | GRCGYC | 2 cut(s) | 210, 333 |
| Bst2UI | CCWGG | 3 cut(s) | 104, 113, 293 |
| Bst4CI | ACNGT | 1 cut(s) | 169 |
| Bst6I | CTCTTC | 1 cut(s) | 137 |
| BstACI | GRCGYC | 2 cut(s) | 210, 333 |
| BstC8I | GCNNGC | 4 cut(s) | 44, 205, 214, 306 |
| BstDEI | CTNAG | 1 cut(s) | 374 |
| BstF5I | GGATG | 4 cut(s) | 10, 74, 390, 474 |
| BstH2I | RGCGCY | 1 cut(s) | 539 |
| BstHHI | GCGC | 1 cut(s) | 538 |
| BstKTI | GATC | 3 cut(s) | 288, 407, 459 |
| BstMAI | GTCTC | 1 cut(s) | 259 |
| BstMBI | GATC | 3 cut(s) | 285, 404, 456 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 209, 213, 350, 566 |
| BstNI | CCWGG | 3 cut(s) | 104, 113, 293 |
| BstSCI | CCNGG | 6 cut(s) | 37, 102, 111, 172, 291, 348 |
| BstSLI | GKGCMC | 1 cut(s) | 355 |
| BstV2I | GAAGAC | 2 cut(s) | 139, 235 |
| BstX2I | RGATCY | 2 cut(s) | 404, 456 |
| BstYI | RGATCY | 2 cut(s) | 404, 456 |
| Bsu36I | CCTNAGG | 1 cut(s) | 374 |
| BsuRI | GGCC | 7 cut(s) | 42, 111, 156, 227, 297, 344, 353 |
| BtgZI | GCGATG | 1 cut(s) | 124 |
| BtrI | CACGTC | 2 cut(s) | 94, 223 |
| BtsCI | GGATG | 4 cut(s) | 10, 74, 390, 474 |
| Cac8I | GCNNGC | 4 cut(s) | 44, 205, 214, 306 |
| CfoI | GCGC | 1 cut(s) | 538 |
| Cfr10I | RCCGGY | 1 cut(s) | 212 |
| Cfr13I | GGNCC | 5 cut(s) | 154, 295, 351, 352, 370 |
| CseI | GACGC | 2 cut(s) | 76, 218 |
| Csp6I | GTAC | 1 cut(s) | 19 |
| CviAII | CATG | 2 cut(s) | 61, 412 |
| CviQI | GTAC | 1 cut(s) | 19 |
| DdeI | CTNAG | 1 cut(s) | 374 |
| DpnI | GATC | 3 cut(s) | 287, 406, 458 |
| DpnII | GATC | 3 cut(s) | 285, 404, 456 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 61, 113 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 61, 113 |
| EaeI | YGGCCR | 2 cut(s) | 40, 225 |
| Eam1104I | CTCTTC | 1 cut(s) | 137 |
| EarI | CTCTTC | 1 cut(s) | 137 |
| Eco147I | AGGCCT | 1 cut(s) | 344 |
| Eco24I | GRGCYC | 1 cut(s) | 355 |
| Eco47I | GGWCC | 1 cut(s) | 370 |
| Eco57I | CTGAAG | 1 cut(s) | 244 |
| Eco81I | CCTNAGG | 1 cut(s) | 374 |
| Eco88I | CYCGRG | 1 cut(s) | 188 |
| EcoO109I | RGGNCCY | 2 cut(s) | 295, 370 |
| EcoRII | CCWGG | 3 cut(s) | 102, 111, 291 |
| EcoT38I | GRGCYC | 1 cut(s) | 355 |
| FaeI | CATG | 2 cut(s) | 64, 415 |
| FaiI | YATR | 3 cut(s) | 62, 413, 567 |
| FaqI | GGGAC | 3 cut(s) | 145, 189, 265 |
| FatI | CATG | 2 cut(s) | 60, 411 |
| FblI | GTMKAC | 1 cut(s) | 336 |
| Fnu4HI | GCNGC | 1 cut(s) | 510 |
| FokI | GGATG | 4 cut(s) | 17, 61, 397, 481 |
| FriOI | GRGCYC | 1 cut(s) | 355 |
| Fsp4HI | GCNGC | 1 cut(s) | 510 |
| FspBI | CTAG | 1 cut(s) | 580 |
| GlaI | GCGC | 1 cut(s) | 537 |
| GluI | GCNGC | 1 cut(s) | 510 |
| HaeII | RGCGCY | 1 cut(s) | 539 |
| HaeIII | GGCC | 7 cut(s) | 42, 111, 156, 227, 297, 344, 353 |
| HapII | CCGG | 5 cut(s) | 39, 173, 213, 349, 460 |
| HgaI | GACGC | 2 cut(s) | 76, 218 |
| HhaI | GCGC | 1 cut(s) | 538 |
| Hin1I | GRCGYC | 2 cut(s) | 210, 333 |
| Hin1II | CATG | 2 cut(s) | 64, 415 |
| Hin6I | GCGC | 1 cut(s) | 536 |
| HinP1I | GCGC | 1 cut(s) | 536 |
| HincII | GTYRAC | 3 cut(s) | 118, 124, 337 |
| HindII | GTYRAC | 3 cut(s) | 118, 124, 337 |
| HindIII | AAGCTT | 1 cut(s) | 233 |
| HinfI | GANTC | 2 cut(s) | 8, 451 |
| HpaII | CCGG | 5 cut(s) | 39, 173, 213, 349, 460 |
| HphI | GGTGA | 3 cut(s) | 88, 127, 454 |
| Hpy166II | GTNNAC | 4 cut(s) | 91, 118, 124, 337 |
| Hpy188I | TCNGA | 3 cut(s) | 13, 404, 456 |
| Hpy188III | TCNNGA | 2 cut(s) | 190, 382 |
| Hpy8I | GTNNAC | 4 cut(s) | 91, 118, 124, 337 |
| Hpy99I | CGWCG | 4 cut(s) | 70, 212, 338, 341 |
| HpyAV | CCTTC | 2 cut(s) | 268, 355 |
| HpyCH4III | ACNGT | 1 cut(s) | 169 |
| HpyCH4IV | ACGT | 4 cut(s) | 93, 120, 222, 333 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 209, 213, 350, 566 |
| HpyF3I | CTNAG | 1 cut(s) | 374 |
| HpySE526I | ACGT | 4 cut(s) | 93, 120, 222, 333 |
| Hsp92I | GRCGYC | 2 cut(s) | 210, 333 |
| Hsp92II | CATG | 2 cut(s) | 64, 415 |
| HspAI | GCGC | 1 cut(s) | 536 |
| KroI | GCCGGC | 1 cut(s) | 212 |
| KroNI | GCCGGC | 1 cut(s) | 214 |
| Kzo9I | GATC | 3 cut(s) | 285, 404, 456 |
| LmnI | GCTCC | 1 cut(s) | 483 |
| MaeI | CTAG | 1 cut(s) | 580 |
| MaeII | ACGT | 4 cut(s) | 93, 120, 222, 333 |
| MaeIII | GTNAC | 2 cut(s) | 52, 94 |
| MalI | GATC | 3 cut(s) | 287, 406, 458 |
| MboI | GATC | 3 cut(s) | 285, 404, 456 |
| MboII | GAAGA | 4 cut(s) | 124, 139, 235, 566 |
| MflI | RGATCY | 2 cut(s) | 404, 456 |
| MhlI | GDGCHC | 1 cut(s) | 355 |
| MlsI | TGGCCA | 1 cut(s) | 227 |
| MluNI | TGGCCA | 1 cut(s) | 227 |
| MnlI | CCTC | 9 cut(s) | 67, 82, 140, 197, 241, 308, 334, 374, 383 |
| Mox20I | TGGCCA | 1 cut(s) | 227 |
| MroNI | GCCGGC | 1 cut(s) | 212 |
| MscI | TGGCCA | 1 cut(s) | 227 |
| Msp20I | TGGCCA | 1 cut(s) | 227 |
| MspI | CCGG | 5 cut(s) | 39, 173, 213, 349, 460 |
| MspR9I | CCNGG | 6 cut(s) | 39, 104, 113, 174, 293, 350 |
| MvaI | CCWGG | 3 cut(s) | 104, 113, 293 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 209, 213, 350, 566 |
| NaeI | GCCGGC | 1 cut(s) | 214 |
| NciI | CCSGG | 3 cut(s) | 39, 174, 350 |
| NdeII | GATC | 3 cut(s) | 285, 404, 456 |
| NgoMIV | GCCGGC | 1 cut(s) | 212 |
| NlaIII | CATG | 2 cut(s) | 64, 415 |
| NlaIV | GGNNCC | 2 cut(s) | 353, 406 |
| NmeAIII | GCCGAG | 1 cut(s) | 512 |
| NmuCI | GTSAC | 2 cut(s) | 52, 94 |
| PaeR7I | CTCGAG | 1 cut(s) | 188 |
| PasI | CCCWGGG | 1 cut(s) | 292 |
| PceI | AGGCCT | 1 cut(s) | 344 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 147 |
| PdiI | GCCGGC | 1 cut(s) | 214 |
| PfeI | GAWTC | 2 cut(s) | 8, 451 |
| PfoI | TCCNGGA | 1 cut(s) | 172 |
| PkrI | GCNGC | 1 cut(s) | 511 |
| PpuMI | RGGWCCY | 1 cut(s) | 370 |
| Psp5II | RGGWCCY | 1 cut(s) | 370 |
| Psp6I | CCWGG | 3 cut(s) | 102, 111, 291 |
| PspGI | CCWGG | 3 cut(s) | 102, 111, 291 |
| PspN4I | GGNNCC | 2 cut(s) | 353, 406 |
| PspOMI | GGGCCC | 1 cut(s) | 351 |
| PspPI | GGNCC | 5 cut(s) | 154, 295, 351, 352, 370 |
| PspPPI | RGGWCCY | 1 cut(s) | 370 |
| PsuI | RGATCY | 2 cut(s) | 404, 456 |
| RsaI | GTAC | 1 cut(s) | 20 |
| RsaNI | GTAC | 1 cut(s) | 19 |
| SalI | GTCGAC | 1 cut(s) | 335 |
| SatI | GCNGC | 1 cut(s) | 510 |
| Sau3AI | GATC | 3 cut(s) | 285, 404, 456 |
| Sau96I | GGNCC | 5 cut(s) | 154, 295, 351, 352, 370 |
| ScrFI | CCNGG | 6 cut(s) | 39, 104, 113, 174, 293, 350 |
| SduI | GDGCHC | 1 cut(s) | 355 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 350 |
| Sfr274I | CTCGAG | 1 cut(s) | 188 |
| SgrDI | CGTCGACG | 1 cut(s) | 335 |
| SinI | GGWCC | 1 cut(s) | 370 |
| SlaI | CTCGAG | 1 cut(s) | 188 |
| SmlI | CTYRAG | 3 cut(s) | 188, 299, 365 |
| SmoI | CTYRAG | 3 cut(s) | 188, 299, 365 |
| SseBI | AGGCCT | 1 cut(s) | 344 |
| SsiI | CCGC | 3 cut(s) | 99, 494, 509 |
| SspMI | CTAG | 1 cut(s) | 580 |
| StuI | AGGCCT | 1 cut(s) | 344 |
| StyD4I | CCNGG | 6 cut(s) | 37, 102, 111, 172, 291, 348 |
| TaaI | ACNGT | 1 cut(s) | 169 |
| TaiI | ACGT | 4 cut(s) | 96, 123, 225, 336 |
| TaqI | TCGA | 4 cut(s) | 189, 246, 336, 437 |
| TauI | GCSGC | 1 cut(s) | 512 |
| TfiI | GAWTC | 2 cut(s) | 8, 451 |
| TseFI | GTSAC | 2 cut(s) | 52, 94 |
| Tsp45I | GTSAC | 2 cut(s) | 52, 94 |
| TspDTI | ATGAA | 2 cut(s) | 21, 488 |
| TspGWI | ACGGA | 1 cut(s) | 397 |
| VpaK11BI | GGWCC | 1 cut(s) | 370 |
| XhoI | CTCGAG | 1 cut(s) | 188 |
| XmiI | GTMKAC | 1 cut(s) | 336 |
| XspI | CTAG | 1 cut(s) | 580 |
| ZraI | GACGTC | 1 cut(s) | 334 |