Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0005328

Physical Location & Seq

Genomic Coordinates Forward (+)

17987560 .. 17991939

Gene Structure 4380 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g21720.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1896 bp

ATGAGTTCCTCAGAGGCTTCAGATCTGTCTATGAAATTCAAATCGAAGAAGCCTCTAACCCTAACCCCTAAATCGAAGCCGGGTTCGGTAATATCCGATCCGATTCTCACCGCCCCGACGCCGGACAGGCCCTGGCAGCCGGCGCCGCCGCGAGCGCGGAACCGGAACGTCGCGCTGTCAATCGCGGATATCAGACGCGCCGCGGCGAAAAGCGTTGGCGAGAAGAAGGAGCAGATCGGATCTGCGAGACGGCAGATCGCGTTCCCGGAGGAGAGTCCGAAGAAGAAGAAGGCCCCGAAAAAGCTGCCGGAGAAGTATGAGATTTTGGGTGATTTTTTTAATTGCTTGGATAGTTCGATTCGGTTGTTGAAGGCTAAGGGAGTGAAGCCGCTCTTCAGGAATATCTGCCCTGCCGTTGAGGATTTGACTGATAGTCACTTGGCTCAGTTGAAGTATATTTTGCCTGAGGTGATTGAGATAAAGAAAGAGCTTGTGTTTGATGAACGAACTAGTTGTTTGAAGCCGGATCTTCATGTTGCTTTGAATGTTCAAGCATTGGAGATTGATGGCGAGTCTAAATCTGAAGGGGGTGGAATTGCGCAGTTGAAGAAGACACTGAATTTGAGAAGGGTGTTCCGTGATCGGCTTGTAAAGGTTTCGATATCCCAGCCTGAGGATTATGAAATTCCAGAAGAACCTCTGCCCCGTCCCTTTAACTGCGACAAGCAAGAAATACATTCATATGGGGTCAAGTTTTCTTCCTCATCCTCTCCTGGTGAGATATCAACTGGTCACCTTCAGGATGATGAAAATCCAGACAAAACACATCAAAAGTCATCAAACCAATCAATGGAGGATTTGAATTTCAACATAATCAGAACTCCCAGTCTATCATTGCCTATTAAGACATCATGTGATGTACCTAAAAGCCAGCAACCAGGCATGGCATCTCATTTTTTGGGGTCTTTTCGAAGGCGCTTTTCGCAGAAACCTATAGGCACTGAGTCAGAGAACATACAGGATGATCCACCGAAGCCGTTCATTCAAGCTTCAAATCTTTCAGTTTCAGAGTCAAATCCCAATACTGTTCGCTCTGTCAAGGAAGATAGTATTGCTGCTTCTTCGCATAGTCAAGTGCTCAATACTGTTTGCTCCGTTAAGGAAGATAGTGTTGATGTTTCTTGTCATGGTCAAGTGCCTGCAACCCCAACCAAAAAGATAGACCCGTTAGAGGATGATGGTTTGTCTGCAAATAATACTGTCATTCAGTCTGCTCCAGGAAAGCTTGCTTCAACTCCAAAGCTTGTTTCTACTCCAGCCAGGTTGATGTCCAGCACACCTGCACCACACCCACCAAAGCGATGCTTTATGACCCCAGAGGATAGCTCGCCAAACAAGTTGGTCAGGCGTCCTCCACGCACCAGATCATTGAAATTTGACACTCCTGTGAAGAGTAGAAATGCTGAAGATGTAGGTCTTGATACAGATGGCGCTTCAATTGATAAGGACATTCTTGATATTCTTCCTGGGGATCTTTTGCAATCACTTAGGGAGAAGGAGCGCAAGGCAACAGAGGAGAGAACTCCAGCCATCACACAAGCTAAGAGGCGGCAGAAAATGATTGCCAAACTGCCTAAACTCTTTAACATGATTCATTTCCTTTTTCAGTCGATGAACCGTTCTTTTATCACCAAACAGGAGCTTGTACACAAGATAATTTGGAACCACTGTGACATGATTGACAGAGAGGATGTTGAAGAGCAACTCAACTTGCTGCAAGAACTGGTTCCAGATTGGATTTCTGAAAAGAAACTTGGAGGAGATTTGCTTGTCATAAACATCAATAAAAAATCATGTCCAGAGGCAATACGATCCCATCTTCAAGAAGCAATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000075 GO:0000076 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0031570 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045786 GO:0046483 GO:0048229 GO:0048519 GO:0048523 GO:0048856 GO:0050789 GO:0050794 GO:0051276 GO:0051726 GO:0065007 GO:0070182 GO:0071704 GO:0071840 GO:0090304 GO:0097472 GO:0140096 GO:1901360 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CDT1 CDT1_C

Protein Analysis

632

Amino Acids

70.29

Weight (kDa)

8.9

Isoelectric Point (pI)

66.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CDT1	PF08839	102 - 219	5.6e-09	DNA replication factor CDT1 like
CDT1_C	PF16679	511 - 605	2.2e-24	DNA replication factor Cdt1 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005328)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31270
fragaria_vesca	FvH4_2g21720 FvH4_2g21720 FvH4_2g21720 FvH4_2g21720
malus_domestica	MD05G1158100.v1.1 MD05G1191600.v1.1 MD05G1199700.v1.1 MD10G1150900.v1.1 MD10G1178300.v1.1
prunus_persica	Prupe.8G189500_v2.0.a1 Prupe.8G217800_v2.0.a1 Prupe.8G225500_v2.0.a1 Prupe.8G225500_v2.0.a1
pyrus_communis	pycom05g15010 pycom05g18610 pycom10g12990 pycom10g13000 pycom10g15480
rosa_chinensis	RchiOBHm_Chr6g0288401
rosa_laevigata	RLG00000012407
rosa_multiflora	Rmu_sc0001038.1_g000012
rosa_roxburghii	Rroxscaffold_7G00180090
rosa_rugosa	Rorug06G0196200
rosa_samantha	Rh6AG307200 Rh6BG313200 Rh6CG321000 Rh6DG306400
rosa_wichuraiana	Rw6G026580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1348
Acc16I	TGCGCA	1 cut(s)	600
Acc36I	ACCTGC	1 cut(s)	1348
AccB1I	GGYRCC	1 cut(s)	142
AccB7I	CCANNNNNTGG	1 cut(s)	850
AccBSI	CCGCTC	1 cut(s)	391
AccII	CGCG	7 cut(s)	151, 157, 173, 185, 198, 203, 260
AciI	CCGC	9 cut(s)	111, 146, 149, 157, 185, 201, 203, 389, 1609
AclWI	GGATC	6 cut(s)	92, 247, 534, 1019, 1539, 1866
AcsI	RAATTY	5 cut(s)	35, 619, 684, 862, 1433
AcuI	CTGAAG	4 cut(s)	379, 603, 782, 1485
AcyI	GRCGYC	3 cut(s)	119, 143, 1408
AfaI	GTAC	2 cut(s)	921, 1707
AfiI	CCNNNNNNNGG	4 cut(s)	121, 673, 850, 1231
AhdI	GACNNNNNGTC	1 cut(s)	432
AhlI	ACTAGT	1 cut(s)	509
AjnI	CCWGG	6 cut(s)	131, 772, 937, 1276, 1319, 1525
AjuI	GAANNNNNNNTTGG	4 cut(s)	1291, 1323, 1797, 1829
AleI	CACNNNNGTG	1 cut(s)	1445
AluBI	AGCT	8 cut(s)	304, 490, 1049, 1285, 1303, 1386, 1601, 1702
AluI	AGCT	8 cut(s)	304, 490, 1049, 1285, 1303, 1386, 1601, 1702
Alw21I	GWGCWC	1 cut(s)	1140
Alw26I	GTCTC	1 cut(s)	241
AlwI	GGATC	6 cut(s)	92, 247, 534, 1019, 1539, 1866
AlwNI	CAGNNNCTG	1 cut(s)	132
AoxI	GGCC	2 cut(s)	128, 291
ApeKI	GCWGC	4 cut(s)	136, 304, 1115, 1774
ApoI	RAATTY	5 cut(s)	35, 619, 684, 862, 1433
ArsI	GACNNNNNNTTYG	2 cut(s)	604, 636
Asp700I	GAANNNNTTC	2 cut(s)	1037, 1785
AspLEI	GCGC	8 cut(s)	145, 157, 175, 200, 601, 978, 1493, 1563
AspS9I	GGNCC	2 cut(s)	129, 292
AsuC2I	CCSGG	2 cut(s)	81, 266
AsuHPI	GGTGA	6 cut(s)	100, 341, 481, 785, 788, 1681
AsuII	TTCGAA	1 cut(s)	970
AxyI	CCTNAGG	2 cut(s)	465, 672
BanI	GGYRCC	1 cut(s)	142
BarI	GAAGNNNNNNTAC	2 cut(s)	1102, 1134
BbsI	GAAGAC	1 cut(s)	617
Bbv12I	GWGCWC	1 cut(s)	1140
BbvI	GCAGC	4 cut(s)	148, 291, 1102, 1761
BccI	CCATC	5 cut(s)	560, 1232, 1481, 1598, 1884
BceAI	ACGGC	3 cut(s)	266, 398, 1021
BcgI	CGANNNNNNTGC	2 cut(s)	286, 320
BciT130I	CCWGG	6 cut(s)	133, 774, 939, 1278, 1321, 1527
BcnI	CCSGG	2 cut(s)	81, 266
BcoDI	GTCTC	1 cut(s)	241
BcuI	ACTAGT	1 cut(s)	509
BfaI	CTAG	1 cut(s)	510
BfmI	CTRYAG	1 cut(s)	993
BfoI	RGCGCY	3 cut(s)	146, 979, 1494
BfuAI	ACCTGC	1 cut(s)	1348
BglI	GCCNNNNNGGC	1 cut(s)	127
BglII	AGATCT	1 cut(s)	22
Bme1390I	CCNGG	8 cut(s)	81, 133, 266, 774, 939, 1278, 1321, 1527
BmeRI	GACNNNNNGTC	1 cut(s)	432
BmgT120I	GGNCC	2 cut(s)	129, 292
BmiI	GGNNCC	5 cut(s)	144, 161, 294, 1724, 1788
BmrFI	CCNGG	8 cut(s)	81, 133, 266, 774, 939, 1278, 1321, 1527
BmrI	ACTGGG	1 cut(s)	879
BmsI	GCATC	2 cut(s)	956, 1352
BmuI	ACTGGG	1 cut(s)	879
BpiI	GAAGAC	1 cut(s)	617
BplI	GAGNNNNNCTC	2 cut(s)	1370, 1402
BpmI	CTGGAG	3 cut(s)	1260, 1299, 1569
Bpu10I	CCTNAGC	1 cut(s)	375
Bpu14I	TTCGAA	1 cut(s)	970
BpuMI	CCSGG	2 cut(s)	81, 266
BsaBI	GATNNNNATC	1 cut(s)	810
BsaHI	GRCGYC	3 cut(s)	119, 143, 1408
BsaJI	CCNNGG	3 cut(s)	131, 201, 1526
BsaWI	WCCGGW	1 cut(s)	162
Bsc4I	CCNNNNNNNGG	4 cut(s)	121, 673, 850, 1231
Bse118I	RCCGGY	1 cut(s)	139
Bse1I	ACTGG	3 cut(s)	793, 885, 1788
Bse21I	CCTNAGG	2 cut(s)	465, 672
Bse3DI	GCAATG	1 cut(s)	893
Bse8I	GATNNNNATC	1 cut(s)	810
BseBI	CCWGG	6 cut(s)	133, 774, 939, 1278, 1321, 1527
BseDI	CCNNGG	3 cut(s)	131, 201, 1526
BseGI	GGATG	5 cut(s)	764, 808, 1027, 1240, 1756
BseJI	GATNNNNATC	1 cut(s)	810
BseLI	CCNNNNNNNGG	4 cut(s)	121, 673, 850, 1231
BseMI	GCAATG	1 cut(s)	893
BseMII	CTCAG	5 cut(s)	24, 456, 458, 663, 993
BseNI	ACTGG	3 cut(s)	793, 885, 1788
BseRI	GAGGAG	3 cut(s)	284, 1589, 1833
BseXI	GCAGC	4 cut(s)	148, 291, 1102, 1761
BseYI	CCCAGC	1 cut(s)	666
BsgI	GTGCAG	1 cut(s)	1326
Bsh1236I	CGCG	7 cut(s)	151, 157, 173, 185, 198, 203, 260
BshFI	GGCC	2 cut(s)	130, 293
BshNI	GGYRCC	1 cut(s)	142
BsiHKAI	GWGCWC	1 cut(s)	1140
BsiSI	CCGG	7 cut(s)	80, 122, 140, 163, 266, 308, 524
BslFI	GGGAC	1 cut(s)	693
BslI	CCNNNNNNNGG	4 cut(s)	121, 673, 850, 1231
BsmAI	GTCTC	1 cut(s)	241
BsmBI	CGTCTC	1 cut(s)	241
BsmFI	GGGAC	1 cut(s)	693
BsnI	GGCC	2 cut(s)	130, 293
Bsp119I	TTCGAA	1 cut(s)	970
Bsp1286I	GDGCHC	1 cut(s)	1140
Bsp1407I	TGTACA	1 cut(s)	1705
BspACI	CCGC	9 cut(s)	111, 146, 149, 157, 185, 201, 203, 389, 1609
BspANI	GGCC	2 cut(s)	130, 293
BspCNI	CTCAG	5 cut(s)	23, 457, 457, 664, 994
BspFNI	CGCG	7 cut(s)	151, 157, 173, 185, 198, 203, 260
BspLI	GGNNCC	5 cut(s)	144, 161, 294, 1724, 1788
BspMI	ACCTGC	1 cut(s)	1348
BspPI	GGATC	6 cut(s)	92, 247, 534, 1019, 1539, 1866
BspQI	GCTCTTC	2 cut(s)	398, 1752
BspT104I	TTCGAA	1 cut(s)	970
BspT107I	GGYRCC	1 cut(s)	142
BsrBI	CCGCTC	1 cut(s)	391
BsrDI	GCAATG	1 cut(s)	893
BsrFI	RCCGGY	1 cut(s)	139
BsrGI	TGTACA	1 cut(s)	1705
BsrI	ACTGG	3 cut(s)	793, 885, 1788
BssAI	RCCGGY	1 cut(s)	139
BssECI	CCNNGG	3 cut(s)	131, 201, 1526
BssNI	GRCGYC	3 cut(s)	119, 143, 1408
Bst2UI	CCWGG	6 cut(s)	133, 774, 939, 1278, 1321, 1527
Bst4CI	ACNGT	5 cut(s)	1087, 1147, 1261, 1679, 1730
Bst6I	CTCTTC	3 cut(s)	398, 1445, 1752
BstACI	GRCGYC	3 cut(s)	119, 143, 1408
BstAUI	TGTACA	1 cut(s)	1705
BstBI	TTCGAA	1 cut(s)	970
BstC8I	GCNNGC	6 cut(s)	141, 153, 932, 1200, 1287, 1388
BstDEI	CTNAG	8 cut(s)	10, 375, 444, 465, 672, 1002, 1547, 1602
BstDSI	CCRYGG	1 cut(s)	201
BstEII	GGTNACC	1 cut(s)	791
BstF5I	GGATG	5 cut(s)	764, 808, 1027, 1240, 1756
BstFNI	CGCG	7 cut(s)	151, 157, 173, 185, 198, 203, 260
BstH2I	RGCGCY	3 cut(s)	146, 979, 1494
BstHHI	GCGC	8 cut(s)	145, 157, 175, 200, 601, 978, 1493, 1563
BstMAI	GTCTC	1 cut(s)	241
BstMWI	GCNNNNNNNGC	6 cut(s)	127, 136, 142, 145, 154, 982
BstNI	CCWGG	6 cut(s)	133, 774, 939, 1278, 1321, 1527
BstPI	GGTNACC	1 cut(s)	791
BstSCI	CCNGG	8 cut(s)	79, 131, 264, 772, 937, 1276, 1319, 1525
BstSFI	CTRYAG	1 cut(s)	993
BstUI	CGCG	7 cut(s)	151, 157, 173, 185, 198, 203, 260
BstV1I	GCAGC	4 cut(s)	148, 291, 1102, 1761
BstV2I	GAAGAC	1 cut(s)	617
BstX2I	RGATCY	4 cut(s)	22, 239, 526, 1531
BstYI	RGATCY	4 cut(s)	22, 239, 526, 1531
Bsu36I	CCTNAGG	2 cut(s)	465, 672
BsuRI	GGCC	2 cut(s)	130, 293
BtgI	CCRYGG	1 cut(s)	201
BtgZI	GCGATG	1 cut(s)	1375
BtsCI	GGATG	5 cut(s)	764, 808, 1027, 1240, 1756
BtsIMutI	CAGTG	3 cut(s)	614, 999, 1726
BveI	ACCTGC	1 cut(s)	1348
Cac8I	GCNNGC	6 cut(s)	141, 153, 932, 1200, 1287, 1388
CaiI	CAGNNNCTG	1 cut(s)	132
CfoI	GCGC	8 cut(s)	145, 157, 175, 200, 601, 978, 1493, 1563
Cfr10I	RCCGGY	1 cut(s)	139
Cfr13I	GGNCC	2 cut(s)	129, 292
Cfr42I	CCGCGG	1 cut(s)	204
CseI	GACGC	3 cut(s)	127, 204, 1397
Csp6I	GTAC	2 cut(s)	920, 1706
CviAII	CATG	7 cut(s)	533, 912, 943, 1187, 1648, 1735, 1854
CviQI	GTAC	2 cut(s)	920, 1706
DdeI	CTNAG	8 cut(s)	10, 375, 444, 465, 672, 1002, 1547, 1602
DinI	GGCGCC	1 cut(s)	144
DriI	GACNNNNNGTC	1 cut(s)	432
Eam1104I	CTCTTC	3 cut(s)	398, 1445, 1752
Eam1105I	GACNNNNNGTC	1 cut(s)	432
EarI	CTCTTC	3 cut(s)	398, 1445, 1752
Eco32I	GATATC	3 cut(s)	190, 663, 783
Eco57I	CTGAAG	4 cut(s)	379, 603, 782, 1485
Eco81I	CCTNAGG	2 cut(s)	465, 672
Eco91I	GGTNACC	1 cut(s)	791
EcoO109I	RGGNCCY	2 cut(s)	129, 292
EcoO65I	GGTNACC	1 cut(s)	791
EcoRII	CCWGG	6 cut(s)	131, 772, 937, 1276, 1319, 1525
EcoRV	GATATC	3 cut(s)	190, 663, 783
EgeI	GGCGCC	1 cut(s)	144
EheI	GGCGCC	1 cut(s)	144
Esp3I	CGTCTC	1 cut(s)	241
FaeI	CATG	7 cut(s)	536, 915, 946, 1190, 1651, 1738, 1857
FalI	AAGNNNNNCTT	4 cut(s)	377, 409, 1349, 1381
FaqI	GGGAC	1 cut(s)	693
FatI	CATG	7 cut(s)	532, 911, 942, 1186, 1647, 1734, 1853
FauNDI	CATATG	1 cut(s)	742
FokI	GGATG	5 cut(s)	751, 815, 1034, 1247, 1763
FspBI	CTAG	1 cut(s)	510
FspI	TGCGCA	1 cut(s)	600
GlaI	GCGC	8 cut(s)	144, 156, 174, 199, 600, 977, 1492, 1562
GsaI	CCCAGC	1 cut(s)	670
GsuI	CTGGAG	3 cut(s)	1260, 1299, 1569
HaeII	RGCGCY	3 cut(s)	146, 979, 1494
HaeIII	GGCC	2 cut(s)	130, 293
HapII	CCGG	7 cut(s)	80, 122, 140, 163, 266, 308, 524
HgaI	GACGC	3 cut(s)	127, 204, 1397
HhaI	GCGC	8 cut(s)	145, 157, 175, 200, 601, 978, 1493, 1563
Hin1I	GRCGYC	3 cut(s)	119, 143, 1408
Hin1II	CATG	7 cut(s)	536, 915, 946, 1190, 1651, 1738, 1857
Hin6I	GCGC	8 cut(s)	143, 155, 173, 198, 599, 976, 1491, 1561
HinP1I	GCGC	8 cut(s)	143, 155, 173, 198, 599, 976, 1491, 1561
HindIII	AAGCTT	3 cut(s)	1047, 1283, 1301
HinfI	GANTC	7 cut(s)	103, 274, 358, 572, 1004, 1070, 1651
HpaII	CCGG	7 cut(s)	80, 122, 140, 163, 266, 308, 524
HphI	GGTGA	6 cut(s)	100, 341, 481, 785, 788, 1681
Hpy166II	GTNNAC	1 cut(s)	1708
Hpy188III	TCNNGA	9 cut(s)	397, 689, 800, 815, 1478, 1514, 1790, 1859, 1883
Hpy8I	GTNNAC	1 cut(s)	1708
Hpy99I	CGWCG	2 cut(s)	121, 173
HpyAV	CCTTC	8 cut(s)	220, 283, 364, 578, 621, 806, 966, 1549
HpyCH4III	ACNGT	5 cut(s)	1087, 1147, 1261, 1679, 1730
HpyCH4IV	ACGT	1 cut(s)	168
HpyCH4V	TGCA	5 cut(s)	1202, 1250, 1343, 1540, 1777
HpyF10VI	GCNNNNNNNGC	6 cut(s)	127, 136, 142, 145, 154, 982
HpyF3I	CTNAG	8 cut(s)	10, 375, 444, 465, 672, 1002, 1547, 1602
HpySE526I	ACGT	1 cut(s)	168
Hsp92I	GRCGYC	3 cut(s)	119, 143, 1408
Hsp92II	CATG	7 cut(s)	536, 915, 946, 1190, 1651, 1738, 1857
HspAI	GCGC	8 cut(s)	143, 155, 173, 198, 599, 976, 1491, 1561
KasI	GGCGCC	1 cut(s)	142
KroI	GCCGGC	1 cut(s)	139
KroNI	GCCGGC	1 cut(s)	141
KspI	CCGCGG	1 cut(s)	204
LguI	GCTCTTC	2 cut(s)	398, 1752
LmnI	GCTCC	5 cut(s)	229, 1157, 1279, 1558, 1699
Lsp1109I	GCAGC	4 cut(s)	148, 291, 1102, 1761
LweI	GCATC	2 cut(s)	956, 1352
MaeI	CTAG	1 cut(s)	510
MaeII	ACGT	1 cut(s)	168
MaeIII	GTNAC	3 cut(s)	434, 791, 1730
MbiI	CCGCTC	1 cut(s)	391
MfeI	CAATTG	1 cut(s)	1497
MflI	RGATCY	4 cut(s)	22, 239, 526, 1531
MhlI	GDGCHC	1 cut(s)	1140
MluCI	AATT	9 cut(s)	35, 340, 594, 619, 684, 862, 1433, 1497, 1716
Mly113I	GGCGCC	1 cut(s)	143
MlyI	GAGTC	4 cut(s)	283, 581, 1013, 1079
MroNI	GCCGGC	1 cut(s)	139
MroXI	GAANNNNTTC	2 cut(s)	1037, 1785
MseI	TTAA	5 cut(s)	339, 714, 903, 1158, 1644
MslI	CAYNNNNRTG	2 cut(s)	741, 1445
MspA1I	CMGCKG	1 cut(s)	203
MspI	CCGG	7 cut(s)	80, 122, 140, 163, 266, 308, 524
MspR9I	CCNGG	8 cut(s)	81, 133, 266, 774, 939, 1278, 1321, 1527
MunI	CAATTG	1 cut(s)	1497
MvaI	CCWGG	6 cut(s)	133, 774, 939, 1278, 1321, 1527
MvnI	CGCG	7 cut(s)	151, 157, 173, 185, 198, 203, 260
MwoI	GCNNNNNNNGC	6 cut(s)	127, 136, 142, 145, 154, 982
NaeI	GCCGGC	1 cut(s)	141
NarI	GGCGCC	1 cut(s)	143
NciI	CCSGG	2 cut(s)	81, 266
NdeI	CATATG	1 cut(s)	742
NgoMIV	GCCGGC	1 cut(s)	139
NlaIII	CATG	7 cut(s)	536, 915, 946, 1190, 1651, 1738, 1857
NlaIV	GGNNCC	5 cut(s)	144, 161, 294, 1724, 1788
NmuCI	GTSAC	3 cut(s)	434, 791, 1730
NsbI	TGCGCA	1 cut(s)	600
NspV	TTCGAA	1 cut(s)	970
OliI	CACNNNNGTG	1 cut(s)	1445
PaqCI	CACCTGC	1 cut(s)	1348
PciSI	GCTCTTC	2 cut(s)	398, 1752
PdiI	GCCGGC	1 cut(s)	141
PdmI	GAANNNNTTC	2 cut(s)	1037, 1785
PfeI	GAWTC	3 cut(s)	103, 358, 1651
PflMI	CCANNNNNTGG	1 cut(s)	850
PfoI	TCCNGGA	2 cut(s)	264, 1276
PleI	GAGTC	4 cut(s)	282, 580, 1012, 1078
PluTI	GGCGCC	1 cut(s)	146
PpsI	GAGTC	4 cut(s)	282, 580, 1012, 1078
Psp6I	CCWGG	6 cut(s)	131, 772, 937, 1276, 1319, 1525
PspEI	GGTNACC	1 cut(s)	791
PspFI	CCCAGC	1 cut(s)	666
PspGI	CCWGG	6 cut(s)	131, 772, 937, 1276, 1319, 1525
PspN4I	GGNNCC	5 cut(s)	144, 161, 294, 1724, 1788
PspPI	GGNCC	2 cut(s)	129, 292
PstNI	CAGNNNCTG	1 cut(s)	132
PsuI	RGATCY	4 cut(s)	22, 239, 526, 1531
RsaI	GTAC	2 cut(s)	921, 1707
RsaNI	GTAC	2 cut(s)	920, 1706
RseI	CAYNNNNRTG	2 cut(s)	741, 1445
SacII	CCGCGG	1 cut(s)	204
SapI	GCTCTTC	2 cut(s)	398, 1752
SaqAI	TTAA	5 cut(s)	339, 714, 903, 1158, 1644
Sau96I	GGNCC	2 cut(s)	129, 292
SchI	GAGTC	4 cut(s)	283, 581, 1013, 1079
ScrFI	CCNGG	8 cut(s)	81, 133, 266, 774, 939, 1278, 1321, 1527
SduI	GDGCHC	1 cut(s)	1140
SfaNI	GCATC	2 cut(s)	956, 1352
SfcI	CTRYAG	1 cut(s)	993
SfoI	GGCGCC	1 cut(s)	144
Sfr303I	CCGCGG	1 cut(s)	204
SfuI	TTCGAA	1 cut(s)	970
SgrBI	CCGCGG	1 cut(s)	204
SmiMI	CAYNNNNRTG	2 cut(s)	741, 1445
SpeI	ACTAGT	1 cut(s)	509
Sse9I	AATT	9 cut(s)	35, 340, 594, 619, 684, 862, 1433, 1497, 1716
SsiI	CCGC	9 cut(s)	111, 146, 149, 157, 185, 201, 203, 389, 1609
SspDI	GGCGCC	1 cut(s)	142
SspMI	CTAG	1 cut(s)	510
StyD4I	CCNGG	8 cut(s)	79, 131, 264, 772, 937, 1276, 1319, 1525
TaaI	ACNGT	5 cut(s)	1087, 1147, 1261, 1679, 1730
TaiI	ACGT	1 cut(s)	171
TaqI	TCGA	6 cut(s)	44, 74, 356, 659, 970, 1670
TasI	AATT	9 cut(s)	35, 340, 594, 619, 684, 862, 1433, 1497, 1716
TatI	WGTACW	1 cut(s)	1705
TauI	GCSGC	6 cut(s)	148, 151, 203, 206, 391, 1612
TfiI	GAWTC	3 cut(s)	103, 358, 1651
Tru1I	TTAA	5 cut(s)	339, 714, 903, 1158, 1644
Tru9I	TTAA	5 cut(s)	339, 714, 903, 1158, 1644
TscAI	CASTG	3 cut(s)	621, 1006, 1733
TseFI	GTSAC	3 cut(s)	434, 791, 1730
TseI	GCWGC	4 cut(s)	136, 304, 1115, 1774
Tsp45I	GTSAC	3 cut(s)	434, 791, 1730
TspDTI	ATGAA	9 cut(s)	47, 516, 521, 696, 729, 822, 1030, 1643, 1688
TspGWI	ACGGA	2 cut(s)	626, 1144
TspRI	CASTG	3 cut(s)	621, 1006, 1733
Van91I	CCANNNNNTGG	1 cut(s)	850
XapI	RAATTY	5 cut(s)	35, 619, 684, 862, 1433
XmnI	GAANNNNTTC	2 cut(s)	1037, 1785
XspI	CTAG	1 cut(s)	510

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.