Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0005328

Physical Location & Seq

Genomic Coordinates Reverse (-)

18501010 .. 18504592

Gene Structure 3583 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G189500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1860 bp

ATGAGTTCCTCAGAGACCCAAAAGACCCCTAAACGCAATCTCTCTCTTACCTTCAAATCGGAAAAACCCCATATAAACCCAAAGCTCCGAGTCGTAGACGACGACTCACTGAGTACCAAAACCCCAGAGAAGCCCCAACACTTCCATCATAAAAGCCTCCGCGAGTCGACCCAGAAGCAACCAACGGTCCAGATCGACTTTGCTAGACGAAAGATCGAATCTTGGCCCGACGAAAACCCAAATAAGACCCATGTTGGTGCCTCCGAGAAGATACCAGAAAAGTATGAGATATTGGGTGAATTTTTTGATTGTTTGGATGCTTCGATTCGGTTGTTGCGGTTGAGGGGTTTGATGACGAGTTTTTCCAATATTTGCCCAAAAATCAAGTGTTTGACAGATAGGAGGTTTACATATAGTCACTTGGCTCAGCTGAAGTTTATTTTTCCTGAGGCAATTGAGATAAAGAAGGTGCTTGTTAAGAATGAGAAAACCAATTGTTTGAAGCCAGATCTTCATGTTACCTTGAATGTTGATGCGGTAGAGAATGATGAGTTGAAATCTGAAGGTGGTGGGCATATGCATTTGAGGAGGGCCTTTCGCGAGCGGCTTGCAGATATTTCAAAGTTCCATCCTGAGGGTTATGAAATTCCAAAAGAAACTCTGCCCCAGCCATTCAATTGCGCAAAGCAAGATATCCATCCAGATACTATTAAGTTTCCCTTGTCACTATCTCCTGAGGTGTTGACTGATTTACACACAGTTGAAAAACCAGATGAAACACATCAAATGCCATCTAATCAGTCAAAGGAAGGAGTGAATTCCAACATAAGTGGAACTCCCGGCCCATTATTACCCATTGAGACATCATTTGAAGCACCAATAGAGCAGCAACCAGCAATGACAGCTCATTTGTCTCGATCTTTTCGACGGCACTTTTCTAAGCCATCCTTCCAAGCTCGAAATGTTTCAGTTCCAGAGTCCAATCTCAGTATAGTTTACTCAGTTGAGGAAGCTAGTACTGCTGCTTCATCGTATGGCAAAGTGCTTGCTACACCAACCGAAGAGATAGGGCCCATAGAAAATGATAATGGTTTATCCACAAAAGGTACTAGCATTCAGTCTACTCCAGCTAGTACTGCTGCTTCATCATATGGCCAAGTGCCCACTACTCCAACCAAAGAGATAGGCCTCATAGAAAATGACAATGGTTTGCCCACAAAAAGTGCTTGCATTCAGTCTACTCCAGCAAAGCTTGCTTCAACTCCAGCCAGGTTGATGACTGTTACACCTGCATTGCACCCGCCAAAGCGCTGTTATATGAGCCCGGATGATAATTCTACTAGCTCACCAGAAAAGTTGGTTAGGCGACCTCCGCGCTCCAGGTCATTGAAATTTGACACTCCTGTGAAGAATAAAAAGGTCGAGGATGAAGCACTTGATATGGACGGTGCATCATTTGATAATGGCTTTTCTGATATTCTTCCAGAGGATCTTTTGCAATCGCTTGAAGATGAGGAGAGGAAGGAAATAGAGGAGCAAAATCCTGACGTCTCACAAGCAAACAGGCTGCGACAGATGATTTCCAGCCTGCCTAATCTCTTCAACACGATTCATCTCCTATTTCAGTCAATGAACTCTTCTGCTATCACAAAAGAGGAGCTTGTACACAAAATAATTTGGACAAACTGTGATTTTGTTGACAGAAAGGAAGTTGAAGAGCAGCTTACCTTGTTGCTAAAGCTGGTTCCAGAATGGATTTCTGAAAAGAAGTTAGCACCTGGAGGAGATTTGCTTTTGATCTACATTAATAAAATGTCAAATCCGGATTCAATACGTGCGCGGCTTGAGGAAGCAATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000075 GO:0000076 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0031570 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045786 GO:0046483 GO:0048229 GO:0048519 GO:0048523 GO:0048856 GO:0050789 GO:0050794 GO:0051276 GO:0051726 GO:0065007 GO:0070182 GO:0071704 GO:0071840 GO:0090304 GO:0097472 GO:0140096 GO:1901360 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CDT1 CDT1_C

Protein Analysis

620

Amino Acids

69.48

Weight (kDa)

6.11

Isoelectric Point (pI)

59.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005328)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31270
fragaria_vesca	FvH4_2g21720 FvH4_2g21720 FvH4_2g21720 FvH4_2g21720
malus_domestica	MD05G1158100.v1.1 MD05G1191600.v1.1 MD05G1199700.v1.1 MD10G1150900.v1.1 MD10G1178300.v1.1
prunus_persica	Prupe.8G189500_v2.0.a1 Prupe.8G217800_v2.0.a1 Prupe.8G225500_v2.0.a1 Prupe.8G225500_v2.0.a1
pyrus_communis	pycom05g15010 pycom05g18610 pycom10g12990 pycom10g13000 pycom10g15480
rosa_chinensis	RchiOBHm_Chr6g0288401
rosa_laevigata	RLG00000012407
rosa_multiflora	Rmu_sc0001038.1_g000012
rosa_roxburghii	Rroxscaffold_7G00180090
rosa_rugosa	Rorug06G0196200
rosa_samantha	Rh6AG307200 Rh6BG313200 Rh6CG321000 Rh6DG306400
rosa_wichuraiana	Rw6G026580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1297
AatII	GACGTC	1 cut(s)	1551
Acc16I	TGCGCA	1 cut(s)	682
Acc36I	ACCTGC	1 cut(s)	1297
AccB1I	GGYRCC	1 cut(s)	257
AccBSI	CCGCTC	1 cut(s)	604
AccI	GTMKAC	4 cut(s)	96, 167, 1121, 1238
AccII	CGCG	4 cut(s)	162, 600, 1375, 1840
AccIII	TCCGGA	1 cut(s)	1822
AciI	CCGC	7 cut(s)	160, 337, 536, 604, 1301, 1373, 1840
AclWI	GGATC	1 cut(s)	1497
AcoI	YGGCCR	1 cut(s)	1153
AcsI	RAATTY	4 cut(s)	299, 645, 817, 1391
AcuI	CTGAAG	2 cut(s)	452, 582
AcyI	GRCGYC	1 cut(s)	1548
AfaI	GTAC	5 cut(s)	115, 1018, 1108, 1135, 1665
AfeI	AGCGCT	1 cut(s)	1310
AfiI	CCNNNNNNNGG	1 cut(s)	634
AjnI	CCWGG	3 cut(s)	1268, 1379, 1777
AleI	CACNNNNGTG	1 cut(s)	1403
Alw26I	GTCTC	4 cut(s)	8, 854, 918, 1555
AlwI	GGATC	1 cut(s)	1497
Aor13HI	TCCGGA	1 cut(s)	1822
Aor51HI	AGCGCT	1 cut(s)	1310
AoxI	GGCC	6 cut(s)	224, 591, 841, 1070, 1153, 1186
ApaI	GGGCCC	1 cut(s)	1074
ApeKI	GCWGC	5 cut(s)	886, 1022, 1139, 1567, 1720
ApoI	RAATTY	4 cut(s)	299, 645, 817, 1391
ArsI	GACNNNNNNTTYG	2 cut(s)	892, 924
AseI	ATTAAT	1 cut(s)	1806
Asp700I	GAANNNNTTC	1 cut(s)	964
AspLEI	GCGC	4 cut(s)	683, 1311, 1377, 1840
AspS9I	GGNCC	6 cut(s)	187, 225, 591, 842, 1070, 1071
AsuC2I	CCSGG	2 cut(s)	840, 1325
AsuHPI	GGTGA	2 cut(s)	308, 1338
AvaII	GGWCC	1 cut(s)	187
AxyI	CCTNAGG	3 cut(s)	447, 633, 735
BaeGI	GKGCMC	2 cut(s)	1074, 1164
BalI	TGGCCA	1 cut(s)	1155
BanI	GGYRCC	1 cut(s)	257
BanII	GRGCYC	2 cut(s)	1074, 1325
BarI	GAAGNNNNNNTAC	4 cut(s)	1009, 1041, 1126, 1158
BbvI	GCAGC	5 cut(s)	898, 1009, 1126, 1554, 1732
BccI	CCATC	5 cut(s)	153, 636, 705, 799, 952
BceAI	ACGGC	1 cut(s)	944
BcgI	CGANNNNNNTGC	2 cut(s)	590, 624
BciT130I	CCWGG	3 cut(s)	1270, 1381, 1779
BcnI	CCSGG	2 cut(s)	840, 1325
BcoDI	GTCTC	4 cut(s)	8, 854, 918, 1555
BfaI	CTAG	5 cut(s)	204, 1014, 1110, 1131, 1341
BfoI	RGCGCY	1 cut(s)	1312
BfuAI	ACCTGC	1 cut(s)	1297
BglII	AGATCT	1 cut(s)	508
BisI	GCNGC	7 cut(s)	605, 887, 1023, 1140, 1568, 1721, 1841
BlpI	GCTNAGC	1 cut(s)	426
BlsI	GCNGC	7 cut(s)	606, 888, 1024, 1141, 1569, 1722, 1842
BmcAI	AGTACT	2 cut(s)	1018, 1135
Bme1390I	CCNGG	5 cut(s)	840, 1270, 1325, 1381, 1779
Bme18I	GGWCC	1 cut(s)	187
BmgT120I	GGNCC	6 cut(s)	187, 225, 591, 842, 1070, 1071
BmiI	GGNNCC	3 cut(s)	259, 1072, 1746
BmrFI	CCNGG	5 cut(s)	840, 1270, 1325, 1381, 1779
BmsI	GCATC	3 cut(s)	307, 523, 1460
BpmI	CTGGAG	5 cut(s)	1110, 1227, 1248, 1363, 1800
Bpu1102I	GCTNAGC	1 cut(s)	426
BpuMI	CCSGG	2 cut(s)	840, 1325
BsaAI	YACGTR	1 cut(s)	1835
BsaBI	GATNNNNATC	1 cut(s)	696
BsaHI	GRCGYC	1 cut(s)	1548
BsaI	GGTCTC	1 cut(s)	8
BsaWI	WCCGGW	1 cut(s)	1822
Bsc4I	CCNNNNNNNGG	1 cut(s)	634
Bse21I	CCTNAGG	3 cut(s)	447, 633, 735
Bse3DI	GCAATG	2 cut(s)	903, 1292
Bse8I	GATNNNNATC	1 cut(s)	696
BseAI	TCCGGA	1 cut(s)	1822
BseBI	CCWGG	3 cut(s)	1270, 1381, 1779
BseGI	GGATG	6 cut(s)	322, 628, 697, 944, 1333, 1432
BseJI	GATNNNNATC	1 cut(s)	696
BseLI	CCNNNNNNNGG	1 cut(s)	634
BseMI	GCAATG	2 cut(s)	903, 1292
BseMII	CTCAG	8 cut(s)	24, 101, 438, 440, 624, 726, 1000, 1014
BseRI	GAGGAG	5 cut(s)	601, 1529, 1547, 1670, 1797
BseSI	GKGCMC	2 cut(s)	1074, 1164
BseXI	GCAGC	5 cut(s)	898, 1009, 1126, 1554, 1732
BseYI	CCCAGC	1 cut(s)	666
Bsh1236I	CGCG	4 cut(s)	162, 600, 1375, 1840
BshFI	GGCC	6 cut(s)	226, 593, 843, 1072, 1155, 1188
BshNI	GGYRCC	1 cut(s)	257
BsiSI	CCGG	3 cut(s)	840, 1325, 1823
BslI	CCNNNNNNNGG	1 cut(s)	634
BsmAI	GTCTC	4 cut(s)	8, 854, 918, 1555
BsmBI	CGTCTC	1 cut(s)	1555
BsmI	GAATGC	2 cut(s)	1113, 1230
BsnI	GGCC	6 cut(s)	226, 593, 843, 1072, 1155, 1188
Bso31I	GGTCTC	1 cut(s)	8
Bsp120I	GGGCCC	1 cut(s)	1070
Bsp1286I	GDGCHC	3 cut(s)	1074, 1164, 1325
Bsp13I	TCCGGA	1 cut(s)	1822
Bsp1407I	TGTACA	1 cut(s)	1663
Bsp143I	GATC	6 cut(s)	192, 213, 508, 917, 1489, 1797
Bsp1720I	GCTNAGC	1 cut(s)	426
Bsp68I	TCGCGA	1 cut(s)	600
BspACI	CCGC	7 cut(s)	160, 337, 536, 604, 1301, 1373, 1840
BspANI	GGCC	6 cut(s)	226, 593, 843, 1072, 1155, 1188
BspCNI	CTCAG	8 cut(s)	23, 102, 439, 439, 625, 727, 999, 1013
BspEI	TCCGGA	1 cut(s)	1822
BspFNI	CGCG	4 cut(s)	162, 600, 1375, 1840
BspLI	GGNNCC	3 cut(s)	259, 1072, 1746
BspMI	ACCTGC	1 cut(s)	1297
BspPI	GGATC	1 cut(s)	1497
BspQI	GCTCTTC	1 cut(s)	1710
BspT107I	GGYRCC	1 cut(s)	257
BspTNI	GGTCTC	1 cut(s)	8
BsrBI	CCGCTC	1 cut(s)	604
BsrDI	GCAATG	2 cut(s)	903, 1292
BsrGI	TGTACA	1 cut(s)	1663
BssMI	GATC	6 cut(s)	192, 213, 508, 917, 1489, 1797
BssNI	GRCGYC	1 cut(s)	1548
Bst2UI	CCWGG	3 cut(s)	1270, 1381, 1779
Bst4CI	ACNGT	5 cut(s)	187, 760, 1282, 1448, 1688
Bst6I	CTCTTC	4 cut(s)	1056, 1604, 1642, 1710
BstACI	GRCGYC	1 cut(s)	1548
BstAPI	GCANNNNNTGC	1 cut(s)	1253
BstAUI	TGTACA	1 cut(s)	1663
BstBAI	YACGTR	1 cut(s)	1835
BstC8I	GCNNGC	6 cut(s)	602, 609, 1047, 1228, 1254, 1589
BstDEI	CTNAG	9 cut(s)	10, 110, 426, 447, 633, 735, 939, 986, 1000
BstF5I	GGATG	6 cut(s)	322, 628, 697, 944, 1333, 1432
BstFNI	CGCG	4 cut(s)	162, 600, 1375, 1840
BstH2I	RGCGCY	1 cut(s)	1312
BstHHI	GCGC	4 cut(s)	683, 1311, 1377, 1840
BstKTI	GATC	6 cut(s)	195, 216, 511, 920, 1492, 1800
BstMAI	GTCTC	4 cut(s)	8, 854, 918, 1555
BstMBI	GATC	6 cut(s)	192, 213, 508, 917, 1489, 1797
BstMWI	GCNNNNNNNGC	5 cut(s)	902, 1019, 1136, 1253, 1372
BstNI	CCWGG	3 cut(s)	1270, 1381, 1779
BstSCI	CCNGG	5 cut(s)	838, 1268, 1323, 1379, 1777
BstSLI	GKGCMC	2 cut(s)	1074, 1164
BstUI	CGCG	4 cut(s)	162, 600, 1375, 1840
BstV1I	GCAGC	5 cut(s)	898, 1009, 1126, 1554, 1732
BstX2I	RGATCY	2 cut(s)	508, 1489
BstYI	RGATCY	2 cut(s)	508, 1489
Bsu36I	CCTNAGG	3 cut(s)	447, 633, 735
BsuRI	GGCC	6 cut(s)	226, 593, 843, 1072, 1155, 1188
BtsCI	GGATG	6 cut(s)	322, 628, 697, 944, 1333, 1432
BtsIMutI	CAGTG	1 cut(s)	107
BtuMI	TCGCGA	1 cut(s)	600
BveI	ACCTGC	1 cut(s)	1297
Cac8I	GCNNGC	6 cut(s)	602, 609, 1047, 1228, 1254, 1589
CfoI	GCGC	4 cut(s)	683, 1311, 1377, 1840
Cfr13I	GGNCC	6 cut(s)	187, 225, 591, 842, 1070, 1071
Csp6I	GTAC	5 cut(s)	114, 1017, 1107, 1134, 1664
CspCI	CAANNNNNGTGG	2 cut(s)	811, 846
CviAII	CATG	2 cut(s)	251, 515
CviQI	GTAC	5 cut(s)	114, 1017, 1107, 1134, 1664
DdeI	CTNAG	9 cut(s)	10, 110, 426, 447, 633, 735, 939, 986, 1000
DpnI	GATC	6 cut(s)	194, 215, 510, 919, 1491, 1799
DpnII	GATC	6 cut(s)	192, 213, 508, 917, 1489, 1797
EaeI	YGGCCR	1 cut(s)	1153
Eam1104I	CTCTTC	4 cut(s)	1056, 1604, 1642, 1710
EarI	CTCTTC	4 cut(s)	1056, 1604, 1642, 1710
Eco147I	AGGCCT	1 cut(s)	1188
Eco24I	GRGCYC	2 cut(s)	1074, 1325
Eco31I	GGTCTC	1 cut(s)	8
Eco32I	GATATC	1 cut(s)	694
Eco47I	GGWCC	1 cut(s)	187
Eco47III	AGCGCT	1 cut(s)	1310
Eco57I	CTGAAG	2 cut(s)	452, 582
Eco81I	CCTNAGG	3 cut(s)	447, 633, 735
EcoO109I	RGGNCCY	2 cut(s)	591, 1070
EcoRI	GAATTC	1 cut(s)	817
EcoRII	CCWGG	3 cut(s)	1268, 1379, 1777
EcoRV	GATATC	1 cut(s)	694
EcoT22I	ATGCAT	1 cut(s)	582
EcoT38I	GRGCYC	2 cut(s)	1074, 1325
Esp3I	CGTCTC	1 cut(s)	1555
FaeI	CATG	2 cut(s)	254, 518
FalI	AAGNNNNNCTT	8 cut(s)	704, 736, 932, 964, 1644, 1676, 1707, 1739
FatI	CATG	2 cut(s)	250, 514
FauI	CCCGC	1 cut(s)	1308
FauNDI	CATATG	2 cut(s)	576, 1150
FblI	GTMKAC	4 cut(s)	96, 167, 1121, 1238
Fnu4HI	GCNGC	7 cut(s)	605, 887, 1023, 1140, 1568, 1721, 1841
FokI	GGATG	6 cut(s)	329, 615, 684, 931, 1340, 1439
FriOI	GRGCYC	2 cut(s)	1074, 1325
Fsp4HI	GCNGC	7 cut(s)	605, 887, 1023, 1140, 1568, 1721, 1841
FspBI	CTAG	5 cut(s)	204, 1014, 1110, 1131, 1341
FspI	TGCGCA	1 cut(s)	682
GlaI	GCGC	4 cut(s)	682, 1310, 1376, 1839
GluI	GCNGC	7 cut(s)	605, 887, 1023, 1140, 1568, 1721, 1841
GsaI	CCCAGC	1 cut(s)	670
GsuI	CTGGAG	5 cut(s)	1110, 1227, 1248, 1363, 1800
HaeII	RGCGCY	1 cut(s)	1312
HaeIII	GGCC	6 cut(s)	226, 593, 843, 1072, 1155, 1188
HapII	CCGG	3 cut(s)	840, 1325, 1823
HhaI	GCGC	4 cut(s)	683, 1311, 1377, 1840
Hin1I	GRCGYC	1 cut(s)	1548
Hin1II	CATG	2 cut(s)	254, 518
Hin6I	GCGC	4 cut(s)	681, 1309, 1375, 1838
HinP1I	GCGC	4 cut(s)	681, 1309, 1375, 1838
HincII	GTYRAC	3 cut(s)	168, 744, 1699
HindII	GTYRAC	3 cut(s)	168, 744, 1699
HindIII	AAGCTT	1 cut(s)	1250
HinfI	GANTC	8 cut(s)	90, 104, 164, 218, 325, 977, 1609, 1826
HpaII	CCGG	3 cut(s)	840, 1325, 1823
HphI	GGTGA	2 cut(s)	308, 1338
Hpy166II	GTNNAC	9 cut(s)	97, 168, 408, 744, 997, 1122, 1239, 1666, 1699
Hpy188I	TCNGA	7 cut(s)	13, 61, 89, 265, 562, 1474, 1762
Hpy8I	GTNNAC	9 cut(s)	97, 168, 408, 744, 997, 1122, 1239, 1666, 1699
Hpy99I	CGWCG	3 cut(s)	104, 233, 930
HpyAV	CCTTC	6 cut(s)	61, 460, 557, 803, 958, 1516
HpyCH4III	ACNGT	5 cut(s)	187, 760, 1282, 1448, 1688
HpyCH4IV	ACGT	2 cut(s)	1548, 1834
HpyCH4V	TGCA	7 cut(s)	580, 611, 1230, 1292, 1297, 1451, 1498
HpyF10VI	GCNNNNNNNGC	5 cut(s)	902, 1019, 1136, 1253, 1372
HpyF3I	CTNAG	9 cut(s)	10, 110, 426, 447, 633, 735, 939, 986, 1000
HpySE526I	ACGT	2 cut(s)	1548, 1834
Hsp92I	GRCGYC	1 cut(s)	1548
Hsp92II	CATG	2 cut(s)	254, 518
HspAI	GCGC	4 cut(s)	681, 1309, 1375, 1838
Kpn2I	TCCGGA	1 cut(s)	1822
Kzo9I	GATC	6 cut(s)	192, 213, 508, 917, 1489, 1797
LguI	GCTCTTC	1 cut(s)	1710
LmnI	GCTCC	4 cut(s)	90, 1382, 1534, 1657
Lsp1109I	GCAGC	5 cut(s)	898, 1009, 1126, 1554, 1732
LweI	GCATC	3 cut(s)	307, 523, 1460
MaeI	CTAG	5 cut(s)	204, 1014, 1110, 1131, 1341
MaeII	ACGT	2 cut(s)	1548, 1834
MaeIII	GTNAC	4 cut(s)	416, 517, 723, 1282
MalI	GATC	6 cut(s)	194, 215, 510, 919, 1491, 1799
MbiI	CCGCTC	1 cut(s)	604
MboI	GATC	6 cut(s)	192, 213, 508, 917, 1489, 1797
MboII	GAAGA	9 cut(s)	280, 503, 1073, 1420, 1472, 1520, 1591, 1629, 1727
MfeI	CAATTG	3 cut(s)	453, 493, 676
MflI	RGATCY	2 cut(s)	508, 1489
MhlI	GDGCHC	3 cut(s)	1074, 1164, 1325
MlsI	TGGCCA	1 cut(s)	1155
MluCI	AATT	9 cut(s)	299, 453, 493, 645, 676, 817, 1333, 1391, 1674
MluNI	TGGCCA	1 cut(s)	1155
MlyI	GAGTC	4 cut(s)	98, 99, 173, 986
MmeI	TCCRAC	2 cut(s)	846, 1196
Mox20I	TGGCCA	1 cut(s)	1155
Mph1103I	ATGCAT	1 cut(s)	582
MroI	TCCGGA	1 cut(s)	1822
MroXI	GAANNNNTTC	1 cut(s)	964
MscI	TGGCCA	1 cut(s)	1155
MseI	TTAA	3 cut(s)	477, 711, 1806
MslI	CAYNNNNRTG	2 cut(s)	255, 1403
Msp20I	TGGCCA	1 cut(s)	1155
MspA1I	CMGCKG	1 cut(s)	430
MspI	CCGG	3 cut(s)	840, 1325, 1823
MspR9I	CCNGG	5 cut(s)	840, 1270, 1325, 1381, 1779
MunI	CAATTG	3 cut(s)	453, 493, 676
Mva1269I	GAATGC	2 cut(s)	1113, 1230
MvaI	CCWGG	3 cut(s)	1270, 1381, 1779
MvnI	CGCG	4 cut(s)	162, 600, 1375, 1840
MwoI	GCNNNNNNNGC	5 cut(s)	902, 1019, 1136, 1253, 1372
NciI	CCSGG	2 cut(s)	840, 1325
NdeI	CATATG	2 cut(s)	576, 1150
NdeII	GATC	6 cut(s)	192, 213, 508, 917, 1489, 1797
NlaIII	CATG	2 cut(s)	254, 518
NlaIV	GGNNCC	3 cut(s)	259, 1072, 1746
NmuCI	GTSAC	2 cut(s)	416, 723
NruI	TCGCGA	1 cut(s)	600
NsbI	TGCGCA	1 cut(s)	682
NsiI	ATGCAT	1 cut(s)	582
OliI	CACNNNNGTG	1 cut(s)	1403
PaqCI	CACCTGC	1 cut(s)	1297
PceI	AGGCCT	1 cut(s)	1188
PciSI	GCTCTTC	1 cut(s)	1710
PcsI	WCGNNNNNNNCGW	2 cut(s)	99, 922
PctI	GAATGC	2 cut(s)	1113, 1230
PdmI	GAANNNNTTC	1 cut(s)	964
PfeI	GAWTC	4 cut(s)	218, 325, 1609, 1826
PkrI	GCNGC	7 cut(s)	606, 888, 1024, 1141, 1569, 1722, 1842
PleI	GAGTC	4 cut(s)	98, 98, 172, 985
PpsI	GAGTC	4 cut(s)	98, 98, 172, 985
Ppu21I	YACGTR	1 cut(s)	1835
PshBI	ATTAAT	1 cut(s)	1806
Psp6I	CCWGG	3 cut(s)	1268, 1379, 1777
PspFI	CCCAGC	1 cut(s)	666
PspGI	CCWGG	3 cut(s)	1268, 1379, 1777
PspN4I	GGNNCC	3 cut(s)	259, 1072, 1746
PspOMI	GGGCCC	1 cut(s)	1070
PspPI	GGNCC	6 cut(s)	187, 225, 591, 842, 1070, 1071
PsuI	RGATCY	2 cut(s)	508, 1489
PvuII	CAGCTG	1 cut(s)	430
RruI	TCGCGA	1 cut(s)	600
RsaI	GTAC	5 cut(s)	115, 1018, 1108, 1135, 1665
RsaNI	GTAC	5 cut(s)	114, 1017, 1107, 1134, 1664
RseI	CAYNNNNRTG	2 cut(s)	255, 1403
SalI	GTCGAC	1 cut(s)	166
SapI	GCTCTTC	1 cut(s)	1710
SaqAI	TTAA	3 cut(s)	477, 711, 1806
SatI	GCNGC	7 cut(s)	605, 887, 1023, 1140, 1568, 1721, 1841
Sau3AI	GATC	6 cut(s)	192, 213, 508, 917, 1489, 1797
Sau96I	GGNCC	6 cut(s)	187, 225, 591, 842, 1070, 1071
ScaI	AGTACT	2 cut(s)	1018, 1135
SchI	GAGTC	4 cut(s)	98, 99, 173, 986
ScrFI	CCNGG	5 cut(s)	840, 1270, 1325, 1381, 1779
SduI	GDGCHC	3 cut(s)	1074, 1164, 1325
SfaNI	GCATC	3 cut(s)	307, 523, 1460
SinI	GGWCC	1 cut(s)	187
SmiMI	CAYNNNNRTG	2 cut(s)	255, 1403
SmlI	CTYRAG	1 cut(s)	1844
SmoI	CTYRAG	1 cut(s)	1844
Sse9I	AATT	9 cut(s)	299, 453, 493, 645, 676, 817, 1333, 1391, 1674
SseBI	AGGCCT	1 cut(s)	1188
SsiI	CCGC	7 cut(s)	160, 337, 536, 604, 1301, 1373, 1840
SspI	AATATT	1 cut(s)	370
SspMI	CTAG	5 cut(s)	204, 1014, 1110, 1131, 1341
StuI	AGGCCT	1 cut(s)	1188
StyD4I	CCNGG	5 cut(s)	838, 1268, 1323, 1379, 1777
TaaI	ACNGT	5 cut(s)	187, 760, 1282, 1448, 1688
TaiI	ACGT	2 cut(s)	1551, 1837
TaqI	TCGA	8 cut(s)	167, 195, 216, 323, 916, 925, 958, 1422
TasI	AATT	9 cut(s)	299, 453, 493, 645, 676, 817, 1333, 1391, 1674
TatI	WGTACW	3 cut(s)	1016, 1133, 1663
TauI	GCSGC	2 cut(s)	607, 1843
TfiI	GAWTC	4 cut(s)	218, 325, 1609, 1826
Tru1I	TTAA	3 cut(s)	477, 711, 1806
Tru9I	TTAA	3 cut(s)	477, 711, 1806
TscAI	CASTG	1 cut(s)	114
TseFI	GTSAC	2 cut(s)	416, 723
TseI	GCWGC	5 cut(s)	886, 1022, 1139, 1567, 1720
Tsp45I	GTSAC	2 cut(s)	416, 723
TspDTI	ATGAA	8 cut(s)	503, 657, 789, 1017, 1134, 1443, 1601, 1646
TspRI	CASTG	1 cut(s)	114
VpaK11BI	GGWCC	1 cut(s)	187
VspI	ATTAAT	1 cut(s)	1806
XapI	RAATTY	4 cut(s)	299, 645, 817, 1391
XmiI	GTMKAC	4 cut(s)	96, 167, 1121, 1238
XmnI	GAANNNNTTC	1 cut(s)	964
XspI	CTAG	5 cut(s)	204, 1014, 1110, 1131, 1341
ZraI	GACGTC	1 cut(s)	1549
ZrmI	AGTACT	2 cut(s)	1018, 1135
Zsp2I	ATGCAT	1 cut(s)	582

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.