CDT1-like protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G31270 |
| fragaria_vesca | FvH4_2g21720 FvH4_2g21720 FvH4_2g21720 FvH4_2g21720 |
| malus_domestica | MD05G1158100.v1.1 MD05G1191600.v1.1 MD05G1199700.v1.1 MD10G1150900.v1.1 MD10G1178300.v1.1 |
| prunus_persica | Prupe.8G189500_v2.0.a1 Prupe.8G217800_v2.0.a1 Prupe.8G225500_v2.0.a1 Prupe.8G225500_v2.0.a1 |
| pyrus_communis | pycom05g15010 pycom05g18610 pycom10g12990 pycom10g13000 pycom10g15480 |
| rosa_chinensis | RchiOBHm_Chr6g0288401 |
| rosa_laevigata | RLG00000012407 |
| rosa_multiflora | Rmu_sc0001038.1_g000012 |
| rosa_roxburghii | Rroxscaffold_7G00180090 |
| rosa_rugosa | Rorug06G0196200 |
| rosa_samantha | Rh6AG307200 Rh6BG313200 Rh6CG321000 Rh6DG306400 |
| rosa_wichuraiana | Rw6G026580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1075 |
| Acc36I | ACCTGC | 3 cut(s) | 524, 1075, 1365 |
| AccI | GTMKAC | 1 cut(s) | 483 |
| AccIII | TCCGGA | 1 cut(s) | 1516 |
| AciI | CCGC | 3 cut(s) | 92, 1073, 1336 |
| AclWI | GGATC | 4 cut(s) | 228, 351, 743, 1266 |
| AcsI | RAATTY | 6 cut(s) | 313, 378, 534, 586, 1160, 1495 |
| AcuI | CTGAAG | 4 cut(s) | 58, 297, 506, 1212 |
| AcyI | GRCGYC | 1 cut(s) | 1135 |
| AfaI | GTAC | 1 cut(s) | 1434 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 462, 955 |
| AjnI | CCWGG | 4 cut(s) | 460, 970, 1000, 1148 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1524, 1556 |
| AleI | CACNNNNGTG | 1 cut(s) | 1172 |
| AluBI | AGCT | 8 cut(s) | 72, 716, 773, 1030, 1113, 1328, 1429, 1540 |
| AluI | AGCT | 8 cut(s) | 72, 716, 773, 1030, 1113, 1328, 1429, 1540 |
| Alw21I | GWGCWC | 1 cut(s) | 864 |
| AlwI | GGATC | 4 cut(s) | 228, 351, 743, 1266 |
| Aor13HI | TCCGGA | 1 cut(s) | 1516 |
| ApeKI | GCWGC | 2 cut(s) | 839, 899 |
| ApoI | RAATTY | 6 cut(s) | 313, 378, 534, 586, 1160, 1495 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 298, 330, 1040, 1072 |
| AseI | ATTAAT | 1 cut(s) | 1566 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1512 |
| AspA2I | CCTAGG | 1 cut(s) | 1253 |
| AsuHPI | GGTGA | 5 cut(s) | 20, 175, 539, 1107, 1408 |
| AsuII | TTCGAA | 1 cut(s) | 694 |
| AvrII | CCTAGG | 1 cut(s) | 1253 |
| AxyI | CCTNAGG | 3 cut(s) | 159, 366, 1584 |
| BanII | GRGCYC | 1 cut(s) | 1103 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 826, 858, 886, 918 |
| BbsI | GAAGAC | 2 cut(s) | 71, 311 |
| Bbv12I | GWGCWC | 1 cut(s) | 864 |
| BbvI | GCAGC | 2 cut(s) | 826, 886 |
| BccI | CCATC | 7 cut(s) | 254, 408, 568, 824, 956, 1067, 1325 |
| BciT130I | CCWGG | 4 cut(s) | 462, 972, 1002, 1150 |
| BfaI | CTAG | 3 cut(s) | 1254, 1388, 1505 |
| BfuAI | ACCTGC | 3 cut(s) | 524, 1075, 1365 |
| BisI | GCNGC | 3 cut(s) | 840, 900, 1337 |
| BlnI | CCTAGG | 1 cut(s) | 1253 |
| BlsI | GCNGC | 3 cut(s) | 841, 901, 1338 |
| Bme1390I | CCNGG | 4 cut(s) | 462, 972, 1002, 1150 |
| BmiI | GGNNCC | 2 cut(s) | 1451, 1515 |
| BmrFI | CCNGG | 4 cut(s) | 462, 972, 1002, 1150 |
| BmrI | ACTGGG | 1 cut(s) | 603 |
| BmsI | GCATC | 2 cut(s) | 680, 1229 |
| BmuI | ACTGGG | 1 cut(s) | 603 |
| BpiI | GAAGAC | 2 cut(s) | 71, 311 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1097, 1129 |
| BpmI | CTGGAG | 3 cut(s) | 984, 1005, 1026 |
| Bpu14I | TTCGAA | 1 cut(s) | 694 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1058 |
| BsaHI | GRCGYC | 1 cut(s) | 1135 |
| BsaJI | CCNNGG | 2 cut(s) | 461, 1253 |
| BsaWI | WCCGGW | 2 cut(s) | 217, 1516 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 462, 955 |
| Bse1I | ACTGG | 3 cut(s) | 204, 609, 1526 |
| Bse21I | CCTNAGG | 3 cut(s) | 159, 366, 1584 |
| Bse3DI | GCAATG | 1 cut(s) | 617 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1058 |
| BseAI | TCCGGA | 1 cut(s) | 1516 |
| BseBI | CCWGG | 4 cut(s) | 462, 972, 1002, 1150 |
| BseDI | CCNNGG | 2 cut(s) | 461, 1253 |
| BseGI | GGATG | 7 cut(s) | 199, 400, 452, 751, 964, 1219, 1483 |
| BseJI | GATNNNNATC | 1 cut(s) | 1058 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 462, 955 |
| BseMI | GCAATG | 1 cut(s) | 617 |
| BseMII | CTCAG | 5 cut(s) | 150, 152, 357, 722, 1575 |
| BseNI | ACTGG | 3 cut(s) | 204, 609, 1526 |
| BseRI | GAGGAG | 3 cut(s) | 439, 1316, 1560 |
| BseXI | GCAGC | 2 cut(s) | 826, 886 |
| BsgI | GTGCAG | 2 cut(s) | 314, 1053 |
| BsiHKAI | GWGCWC | 1 cut(s) | 864 |
| BsiSI | CCGG | 2 cut(s) | 218, 1517 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 462, 955 |
| Bsp119I | TTCGAA | 1 cut(s) | 694 |
| Bsp1286I | GDGCHC | 2 cut(s) | 864, 1103 |
| Bsp13I | TCCGGA | 1 cut(s) | 1516 |
| Bsp1407I | TGTACA | 1 cut(s) | 1432 |
| Bsp143I | GATC | 6 cut(s) | 220, 334, 356, 748, 1258, 1574 |
| BspACI | CCGC | 3 cut(s) | 92, 1073, 1336 |
| BspCNI | CTCAG | 5 cut(s) | 151, 151, 358, 721, 1576 |
| BspEI | TCCGGA | 1 cut(s) | 1516 |
| BspLI | GGNNCC | 2 cut(s) | 1451, 1515 |
| BspMI | ACCTGC | 3 cut(s) | 524, 1075, 1365 |
| BspPI | GGATC | 4 cut(s) | 228, 351, 743, 1266 |
| BspQI | GCTCTTC | 1 cut(s) | 1479 |
| BspT104I | TTCGAA | 1 cut(s) | 694 |
| BsrDI | GCAATG | 1 cut(s) | 617 |
| BsrGI | TGTACA | 1 cut(s) | 1432 |
| BsrI | ACTGG | 3 cut(s) | 204, 609, 1526 |
| BssECI | CCNNGG | 2 cut(s) | 461, 1253 |
| BssMI | GATC | 6 cut(s) | 220, 334, 356, 748, 1258, 1574 |
| BssNI | GRCGYC | 1 cut(s) | 1135 |
| BssT1I | CCWWGG | 1 cut(s) | 1253 |
| Bst2UI | CCWGG | 4 cut(s) | 462, 972, 1002, 1150 |
| Bst4CI | ACNGT | 5 cut(s) | 413, 490, 725, 871, 1406 |
| Bst6I | CTCTTC | 2 cut(s) | 1172, 1479 |
| BstACI | GRCGYC | 1 cut(s) | 1135 |
| BstAUI | TGTACA | 1 cut(s) | 1432 |
| BstBI | TTCGAA | 1 cut(s) | 694 |
| BstC8I | GCNNGC | 2 cut(s) | 419, 924 |
| BstDEI | CTNAG | 8 cut(s) | 54, 138, 159, 366, 708, 1274, 1329, 1584 |
| BstF5I | GGATG | 7 cut(s) | 199, 400, 452, 751, 964, 1219, 1483 |
| BstKTI | GATC | 6 cut(s) | 223, 337, 359, 751, 1261, 1577 |
| BstMBI | GATC | 6 cut(s) | 220, 334, 356, 748, 1258, 1574 |
| BstNI | CCWGG | 4 cut(s) | 462, 972, 1002, 1150 |
| BstSCI | CCNGG | 4 cut(s) | 460, 970, 1000, 1148 |
| BstV1I | GCAGC | 2 cut(s) | 826, 886 |
| BstV2I | GAAGAC | 2 cut(s) | 71, 311 |
| BstX2I | RGATCY | 3 cut(s) | 220, 356, 1258 |
| BstYI | RGATCY | 3 cut(s) | 220, 356, 1258 |
| Bsu36I | CCTNAGG | 3 cut(s) | 159, 366, 1584 |
| BtgZI | GCGATG | 1 cut(s) | 1102 |
| BtsCI | GGATG | 7 cut(s) | 199, 400, 452, 751, 964, 1219, 1483 |
| BtsIMutI | CAGTG | 3 cut(s) | 308, 616, 730 |
| BveI | ACCTGC | 3 cut(s) | 524, 1075, 1365 |
| Cac8I | GCNNGC | 2 cut(s) | 419, 924 |
| CseI | GACGC | 2 cut(s) | 1124, 1226 |
| CsiI | ACCWGGT | 1 cut(s) | 1148 |
| Csp6I | GTAC | 1 cut(s) | 1433 |
| CviAII | CATG | 4 cut(s) | 227, 851, 1375, 1462 |
| CviQI | GTAC | 1 cut(s) | 1433 |
| DdeI | CTNAG | 8 cut(s) | 54, 138, 159, 366, 708, 1274, 1329, 1584 |
| DpnI | GATC | 6 cut(s) | 222, 336, 358, 750, 1260, 1576 |
| DpnII | GATC | 6 cut(s) | 220, 334, 356, 748, 1258, 1574 |
| Eam1104I | CTCTTC | 2 cut(s) | 1172, 1479 |
| EarI | CTCTTC | 2 cut(s) | 1172, 1479 |
| Eco130I | CCWWGG | 1 cut(s) | 1253 |
| Eco24I | GRGCYC | 1 cut(s) | 1103 |
| Eco57I | CTGAAG | 4 cut(s) | 58, 297, 506, 1212 |
| Eco81I | CCTNAGG | 3 cut(s) | 159, 366, 1584 |
| EcoRII | CCWGG | 4 cut(s) | 460, 970, 1000, 1148 |
| EcoT14I | CCWWGG | 1 cut(s) | 1253 |
| EcoT38I | GRGCYC | 1 cut(s) | 1103 |
| ErhI | CCWWGG | 1 cut(s) | 1253 |
| FaeI | CATG | 4 cut(s) | 230, 854, 1378, 1465 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 56, 88, 1224, 1256 |
| FatI | CATG | 4 cut(s) | 226, 850, 1374, 1461 |
| FblI | GTMKAC | 1 cut(s) | 483 |
| Fnu4HI | GCNGC | 3 cut(s) | 840, 900, 1337 |
| FokI | GGATG | 7 cut(s) | 206, 387, 439, 758, 971, 1226, 1490 |
| FriOI | GRGCYC | 1 cut(s) | 1103 |
| Fsp4HI | GCNGC | 3 cut(s) | 840, 900, 1337 |
| FspBI | CTAG | 3 cut(s) | 1254, 1388, 1505 |
| GluI | GCNGC | 3 cut(s) | 840, 900, 1337 |
| GsuI | CTGGAG | 3 cut(s) | 984, 1005, 1026 |
| HapII | CCGG | 2 cut(s) | 218, 1517 |
| HgaI | GACGC | 2 cut(s) | 1124, 1226 |
| Hin1I | GRCGYC | 1 cut(s) | 1135 |
| Hin1II | CATG | 4 cut(s) | 230, 854, 1378, 1465 |
| HincII | GTYRAC | 1 cut(s) | 474 |
| HindII | GTYRAC | 1 cut(s) | 474 |
| HindIII | AAGCTT | 2 cut(s) | 1028, 1538 |
| HinfI | GANTC | 5 cut(s) | 37, 728, 761, 794, 1378 |
| HpaII | CCGG | 2 cut(s) | 218, 1517 |
| HphI | GGTGA | 5 cut(s) | 20, 175, 539, 1107, 1408 |
| Hpy166II | GTNNAC | 4 cut(s) | 120, 474, 484, 1435 |
| Hpy188I | TCNGA | 8 cut(s) | 141, 277, 602, 711, 733, 770, 793, 1531 |
| Hpy8I | GTNNAC | 4 cut(s) | 120, 474, 484, 1435 |
| HpyAV | CCTTC | 6 cut(s) | 272, 315, 530, 690, 751, 1285 |
| HpyCH4III | ACNGT | 5 cut(s) | 413, 490, 725, 871, 1406 |
| HpyCH4IV | ACGT | 1 cut(s) | 1594 |
| HpyCH4V | TGCA | 4 cut(s) | 295, 926, 1070, 1267 |
| HpyF3I | CTNAG | 8 cut(s) | 54, 138, 159, 366, 708, 1274, 1329, 1584 |
| HpySE526I | ACGT | 1 cut(s) | 1594 |
| Hsp92I | GRCGYC | 1 cut(s) | 1135 |
| Hsp92II | CATG | 4 cut(s) | 230, 854, 1378, 1465 |
| Kpn2I | TCCGGA | 1 cut(s) | 1516 |
| Kzo9I | GATC | 6 cut(s) | 220, 334, 356, 748, 1258, 1574 |
| LguI | GCTCTTC | 1 cut(s) | 1479 |
| LmnI | GCTCC | 3 cut(s) | 821, 1003, 1426 |
| Lsp1109I | GCAGC | 2 cut(s) | 826, 886 |
| LweI | GCATC | 2 cut(s) | 680, 1229 |
| MabI | ACCWGGT | 1 cut(s) | 1148 |
| MaeI | CTAG | 3 cut(s) | 1254, 1388, 1505 |
| MaeII | ACGT | 1 cut(s) | 1594 |
| MaeIII | GTNAC | 2 cut(s) | 128, 1457 |
| MalI | GATC | 6 cut(s) | 222, 336, 358, 750, 1260, 1576 |
| MboI | GATC | 6 cut(s) | 220, 334, 356, 748, 1258, 1574 |
| MfeI | CAATTG | 1 cut(s) | 19 |
| MflI | RGATCY | 3 cut(s) | 220, 356, 1258 |
| MhlI | GDGCHC | 2 cut(s) | 864, 1103 |
| MluCI | AATT | 9 cut(s) | 19, 313, 378, 534, 586, 1160, 1443, 1495, 1508 |
| MlyI | GAGTC | 2 cut(s) | 737, 803 |
| MmeI | TCCRAC | 1 cut(s) | 171 |
| MroI | TCCGGA | 1 cut(s) | 1516 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1512 |
| MseI | TTAA | 6 cut(s) | 510, 591, 627, 822, 1371, 1566 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1172 |
| MspI | CCGG | 2 cut(s) | 218, 1517 |
| MspR9I | CCNGG | 4 cut(s) | 462, 972, 1002, 1150 |
| MunI | CAATTG | 1 cut(s) | 19 |
| MvaI | CCWGG | 4 cut(s) | 462, 972, 1002, 1150 |
| NdeII | GATC | 6 cut(s) | 220, 334, 356, 748, 1258, 1574 |
| NlaIII | CATG | 4 cut(s) | 230, 854, 1378, 1465 |
| NlaIV | GGNNCC | 2 cut(s) | 1451, 1515 |
| NmuCI | GTSAC | 2 cut(s) | 128, 1457 |
| NspV | TTCGAA | 1 cut(s) | 694 |
| OliI | CACNNNNGTG | 1 cut(s) | 1172 |
| PaqCI | CACCTGC | 1 cut(s) | 1075 |
| PciSI | GCTCTTC | 1 cut(s) | 1479 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1512 |
| PfeI | GAWTC | 3 cut(s) | 37, 761, 1378 |
| PfoI | TCCNGGA | 1 cut(s) | 1000 |
| PkrI | GCNGC | 3 cut(s) | 841, 901, 1338 |
| PleI | GAGTC | 2 cut(s) | 736, 802 |
| PpsI | GAGTC | 2 cut(s) | 736, 802 |
| PshBI | ATTAAT | 1 cut(s) | 1566 |
| Psp6I | CCWGG | 4 cut(s) | 460, 970, 1000, 1148 |
| PspGI | CCWGG | 4 cut(s) | 460, 970, 1000, 1148 |
| PspN4I | GGNNCC | 2 cut(s) | 1451, 1515 |
| PsuI | RGATCY | 3 cut(s) | 220, 356, 1258 |
| RsaI | GTAC | 1 cut(s) | 1434 |
| RsaNI | GTAC | 1 cut(s) | 1433 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1172 |
| SapI | GCTCTTC | 1 cut(s) | 1479 |
| SaqAI | TTAA | 6 cut(s) | 510, 591, 627, 822, 1371, 1566 |
| SatI | GCNGC | 3 cut(s) | 840, 900, 1337 |
| Sau3AI | GATC | 6 cut(s) | 220, 334, 356, 748, 1258, 1574 |
| SchI | GAGTC | 2 cut(s) | 737, 803 |
| ScrFI | CCNGG | 4 cut(s) | 462, 972, 1002, 1150 |
| SduI | GDGCHC | 2 cut(s) | 864, 1103 |
| SexAI | ACCWGGT | 1 cut(s) | 1148 |
| SfaNI | GCATC | 2 cut(s) | 680, 1229 |
| SfuI | TTCGAA | 1 cut(s) | 694 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1172 |
| Sse9I | AATT | 9 cut(s) | 19, 313, 378, 534, 586, 1160, 1443, 1495, 1508 |
| SsiI | CCGC | 3 cut(s) | 92, 1073, 1336 |
| SspMI | CTAG | 3 cut(s) | 1254, 1388, 1505 |
| StyD4I | CCNGG | 4 cut(s) | 460, 970, 1000, 1148 |
| StyI | CCWWGG | 1 cut(s) | 1253 |
| TaaI | ACNGT | 5 cut(s) | 413, 490, 725, 871, 1406 |
| TaiI | ACGT | 1 cut(s) | 1597 |
| TaqI | TCGA | 3 cut(s) | 35, 269, 694 |
| TasI | AATT | 9 cut(s) | 19, 313, 378, 534, 586, 1160, 1443, 1495, 1508 |
| TatI | WGTACW | 1 cut(s) | 1432 |
| TauI | GCSGC | 1 cut(s) | 1339 |
| TfiI | GAWTC | 3 cut(s) | 37, 761, 1378 |
| Tru1I | TTAA | 6 cut(s) | 510, 591, 627, 822, 1371, 1566 |
| Tru9I | TTAA | 6 cut(s) | 510, 591, 627, 822, 1371, 1566 |
| TscAI | CASTG | 3 cut(s) | 315, 616, 730 |
| TseFI | GTSAC | 2 cut(s) | 128, 1457 |
| TseI | GCWGC | 2 cut(s) | 839, 899 |
| Tsp45I | GTSAC | 2 cut(s) | 128, 1457 |
| TspDTI | ATGAA | 8 cut(s) | 158, 215, 390, 546, 558, 1212, 1370, 1415 |
| TspGWI | ACGGA | 3 cut(s) | 320, 808, 1226 |
| TspRI | CASTG | 3 cut(s) | 315, 616, 730 |
| VspI | ATTAAT | 1 cut(s) | 1566 |
| XapI | RAATTY | 6 cut(s) | 313, 378, 534, 586, 1160, 1495 |
| XmaJI | CCTAGG | 1 cut(s) | 1253 |
| XmiI | GTMKAC | 1 cut(s) | 483 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1512 |
| XspI | CTAG | 3 cut(s) | 1254, 1388, 1505 |