Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0005328

Physical Location & Seq

Genomic Coordinates Reverse (-)

18561587 .. 18564911

Gene Structure 3325 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g15010.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2124 bp

ATGAGTTCCTCAGAAACCCAAAGGACAGCTAAACCCAGTCTCTCTCTAACCTTCAAATCGGAGAAACCCCATTTAAACCCAAAGCTCCGAGTTGCAGAAATCGACTCACTGAGCTCCAAAACCCCTGAGAAGCCCCAACAGTTCCGTCACAAAAGCTTATGGGAGCCGACCCAGAAGCAGCCGGCGGCTCAGATCGGATCTGCGAGACGAAAGATAGATTCTTGGTCCGAGGAAAACCCGATTGAGACCCATTTTGGTGCCTCCGAGAAGCTACCGGAAAAGTATGAGATATTGAGCGAGTTTTTCGATTGCTTGGACGCTTCGATTCGGTTGTTGCGGTTGAGGGGCTTGATGCCAAGCTTTACCAATCTTCGCCCGAAAATTGAGTGTTTAACGGATAGGAGGTTTACAATTAGTCACTTGGCTCAGCTGAAGATTGTTTTACCTGAGGTAATTGATATTACAAAAGTGCTTGTTAAGGATGAGAGAACCAGTGGTATGAAGCCGGATCTTCATGTCACCATGAATGTTGATGCAGTGGAAAACGATGACAATTTGAAATCTGAAGGTGGTGGGCATATGCATTTGAGGCGAGCCTTCCGCCATCGGCTTGGAGACATTTCAAAATCCCATCCTGAGGGTTATGAAATTCCAGAAGAAACTCTGCCCCCACCATTCAATTTTGCAGAGCAACATATGCATCCAGATACAATTAAGTGTTCCTTATCATCACCTCTTGAGGCATTGACTGGTGCACATACAGTTGAGCAACCAGAAGCATCCAAAACCTACCTTCAAAGTGATGACGTTCCAGATGAAACACATCCAATGCCATCTGATCAATCAAAGGAGAATTTGAATTCAAACATAAGCGCAATTCCTGACCCGTCATTGCCCAATGAGACATCATTTGAAGCACCAGCAGAGCAGCTACCAGTAATAACAACTCATCTTCCTCATTCTTTTCAAAGGCACTTTTCTTTACCAGCCTTCCAAGGCCGAAATGTTTTAGTTCCAGAGTCAAATTTTAATATAGTTTGCTCCGTTGAGGAAGCTAGTGTTGTTGCTTCGTCATTTGAAGCACTAGTGGAGCAGCAACCAGCAATAACATCTCATCTTCCTCAACCTTTTCGAAGGCACTTTTCTCAGCCATCCTTTCAAGCTCGAAATATTTCACTTCCAGAGTCAAATGTCAATGTAGTTTGCTCTGTTGAGGAAGCTAGTACTGCTGTTTCGTTGAGTGGCCAAGTGCCTGCAACTCCAACCAAAGAGACAAGCCCCATTGAAAGCGACGATGGTTTACCCACAAAATGTGCTAGCATTCTGTCCACTCCAAAACTTGCTTCAACTCCAGTCAAAGAGATAGGCCCCATAGAAAATGATGATGATTTCACCATAGAAGGTGCTAGTATTCAGTCCACTCCAGCAAAGCTTGCTTCAACTCCTGCTAGATTGATGTCTGCCACACCAGCATTGCGCCCGCCAAAACGCTGTTATATGAGCCCAGATGACAATTATACTAACTCTCCAGAAAAGATGGTTAGGTATCCTCCACGCTCCAGGTCGCTGAAATTTGACACTCCTGTGAAGAATAAAATGGTCAAGGATGAAGTACTTGATATGGACAATGCATCAATTGATAATGACTTTTCTCATATTCCTCCGGAGGATCTTTTGAAATTGCTCAAGGATGAAGAGAGGACGGCAGTAGAGGAGCAAATTCCCGCCATTTCACAAGCAAAGAGGGATAAACAGATGATTTCCGGCCTACCTAAACTCTTCGACATGATCCATTTCCTATTTCAGTCTATGAACCGTTCTGCCATCACAAAAGAGGAGCTTGTACACAAGCTAATTTGGAATAACTTAGATTTTACCGATACAAGTAAGCCATTGTATAAAGTAGATGATTTCCTATTACGATTCACGAAAGCTCCTGGTGAACCTAACTCCTCTATTCTTTTCACAGATGAAGTTGAAGAGCAGCTTACCTTGCTGCTAGATCTGGTTCCAGAATGGATTTCTGAAGAAAAGTTGGAATCCGGAGGAGATTTGCTTTTGATCCACATTAACAAAATGTCAAATCCAGGTTCAATACGGGCACAGCTCGAAGCAGCAAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000075 GO:0000076 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0031570 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045786 GO:0046483 GO:0048229 GO:0048519 GO:0048523 GO:0048856 GO:0050789 GO:0050794 GO:0051276 GO:0051726 GO:0065007 GO:0070182 GO:0071704 GO:0071840 GO:0090304 GO:0097472 GO:0140096 GO:1901360 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CDT1 CDT1_C

Protein Analysis

708

Amino Acids

79.04

Weight (kDa)

5.34

Isoelectric Point (pI)

65.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005328)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31270
fragaria_vesca	FvH4_2g21720 FvH4_2g21720 FvH4_2g21720 FvH4_2g21720
malus_domestica	MD05G1158100.v1.1 MD05G1191600.v1.1 MD05G1199700.v1.1 MD10G1150900.v1.1 MD10G1178300.v1.1
prunus_persica	Prupe.8G189500_v2.0.a1 Prupe.8G217800_v2.0.a1 Prupe.8G225500_v2.0.a1 Prupe.8G225500_v2.0.a1
pyrus_communis	pycom05g15010 pycom05g18610 pycom10g12990 pycom10g13000 pycom10g15480
rosa_chinensis	RchiOBHm_Chr6g0288401
rosa_laevigata	RLG00000012407
rosa_multiflora	Rmu_sc0001038.1_g000012
rosa_roxburghii	Rroxscaffold_7G00180090
rosa_rugosa	Rorug06G0196200
rosa_samantha	Rh6AG307200 Rh6BG313200 Rh6CG321000 Rh6DG306400
rosa_wichuraiana	Rw6G026580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	257
AccIII	TCCGGA	2 cut(s)	1663, 2042
AciI	CCGC	5 cut(s)	185, 337, 601, 1481, 1725
AclWI	GGATC	5 cut(s)	205, 516, 1677, 1783, 2056
AcoI	YGGCCR	1 cut(s)	1243
AcsI	RAATTY	6 cut(s)	648, 853, 859, 1024, 1571, 1719
AcuI	CTGAAG	3 cut(s)	452, 585, 2046
AfaI	GTAC	3 cut(s)	1225, 1614, 1845
AfiI	CCNNNNNNNGG	1 cut(s)	637
AhlI	ACTAGT	1 cut(s)	1084
AjnI	CCWGG	3 cut(s)	1559, 1936, 2086
AjuI	GAANNNNNNNTTGG	2 cut(s)	1327, 1359
AleI	CACNNNNGTG	1 cut(s)	1583
Alw21I	GWGCWC	2 cut(s)	116, 757
Alw26I	GTCTC	6 cut(s)	44, 199, 239, 609, 896, 1265
Alw44I	GTGCAC	1 cut(s)	753
AlwI	GGATC	5 cut(s)	205, 516, 1677, 1783, 2056
Aor13HI	TCCGGA	2 cut(s)	1663, 2042
AoxI	GGCC	4 cut(s)	997, 1243, 1366, 1765
ApaLI	GTGCAC	1 cut(s)	753
ApeKI	GCWGC	6 cut(s)	178, 928, 1093, 1984, 1996, 2114
ApoI	RAATTY	6 cut(s)	648, 853, 859, 1024, 1571, 1719
Asp700I	GAANNNNTTC	1 cut(s)	1171
AspLEI	GCGC	2 cut(s)	875, 1479
AspS9I	GGNCC	2 cut(s)	225, 1367
AsuHPI	GGTGA	4 cut(s)	511, 723, 1384, 1952
AsuII	TTCGAA	1 cut(s)	1132
AsuNHI	GCTAGC	1 cut(s)	1316
AvaII	GGWCC	1 cut(s)	225
AxyI	CCTNAGG	2 cut(s)	447, 636
BaeGI	GKGCMC	2 cut(s)	757, 2104
BalI	TGGCCA	1 cut(s)	1245
BanI	GGYRCC	1 cut(s)	257
BanII	GRGCYC	2 cut(s)	116, 1505
Bbv12I	GWGCWC	2 cut(s)	116, 757
BbvI	GCAGC	5 cut(s)	190, 940, 1105, 1983, 1996
BccI	CCATC	7 cut(s)	612, 639, 841, 1159, 1289, 1531, 1832
BceAI	ACGGC	1 cut(s)	1719
BciT130I	CCWGG	3 cut(s)	1561, 1938, 2088
BciVI	GTATCC	1 cut(s)	1557
BclI	TGATCA	1 cut(s)	838
BcoDI	GTCTC	6 cut(s)	44, 199, 239, 609, 896, 1265
BcuI	ACTAGT	1 cut(s)	1084
BfaI	CTAG	8 cut(s)	1056, 1085, 1221, 1317, 1407, 1449, 2000, 2122
BfuI	GTATCC	1 cut(s)	1557
BglII	AGATCT	1 cut(s)	2002
BisI	GCNGC	7 cut(s)	179, 186, 929, 1094, 1985, 1997, 2115
BlpI	GCTNAGC	1 cut(s)	426
BlsI	GCNGC	7 cut(s)	180, 187, 930, 1095, 1986, 1998, 2116
BmcAI	AGTACT	2 cut(s)	1225, 1614
Bme1390I	CCNGG	3 cut(s)	1561, 1938, 2088
Bme18I	GGWCC	1 cut(s)	225
BmgT120I	GGNCC	2 cut(s)	225, 1367
BmiI	GGNNCC	4 cut(s)	165, 259, 1369, 2010
BmrFI	CCNGG	3 cut(s)	1561, 1938, 2088
BmrI	ACTGGG	1 cut(s)	30
BmsI	GCATC	5 cut(s)	342, 523, 709, 788, 1640
BmtI	GCTAGC	1 cut(s)	1320
BmuI	ACTGGG	1 cut(s)	30
BpmI	CTGGAG	4 cut(s)	1335, 1407, 1512, 1543
Bpu1102I	GCTNAGC	1 cut(s)	426
Bpu14I	TTCGAA	1 cut(s)	1132
BpuEI	CTTGAG	2 cut(s)	758, 1670
BsaI	GGTCTC	1 cut(s)	239
BsaJI	CCNNGG	2 cut(s)	228, 994
BsaWI	WCCGGW	3 cut(s)	274, 1663, 2042
BsaXI	ACNNNNNCTCC	4 cut(s)	1510, 1540, 1918, 1948
Bsc4I	CCNNNNNNNGG	1 cut(s)	637
Bse118I	RCCGGY	1 cut(s)	181
Bse1I	ACTGG	5 cut(s)	36, 492, 754, 935, 1352
Bse21I	CCTNAGG	2 cut(s)	447, 636
Bse3DI	GCAATG	2 cut(s)	890, 1472
BseAI	TCCGGA	2 cut(s)	1663, 2042
BseBI	CCWGG	3 cut(s)	1561, 1938, 2088
BseDI	CCNNGG	2 cut(s)	228, 994
BseGI	GGATG	8 cut(s)	487, 631, 700, 779, 823, 1151, 1612, 1696
BseLI	CCNNNNNNNGG	1 cut(s)	637
BseMI	GCAATG	2 cut(s)	890, 1472
BseMII	CTCAG	8 cut(s)	24, 101, 117, 203, 438, 440, 627, 1160
BseNI	ACTGG	5 cut(s)	36, 492, 754, 935, 1352
BseRI	GAGGAG	4 cut(s)	1727, 1850, 1942, 2061
BseSI	GKGCMC	2 cut(s)	757, 2104
BseXI	GCAGC	5 cut(s)	190, 940, 1105, 1983, 1996
BshFI	GGCC	4 cut(s)	999, 1245, 1368, 1767
BshNI	GGYRCC	1 cut(s)	257
BsiHKAI	GWGCWC	2 cut(s)	116, 757
BsiSI	CCGG	6 cut(s)	182, 275, 506, 1664, 1764, 2043
BslI	CCNNNNNNNGG	1 cut(s)	637
BsmAI	GTCTC	6 cut(s)	44, 199, 239, 609, 896, 1265
BsmBI	CGTCTC	1 cut(s)	199
BsmI	GAATGC	1 cut(s)	1320
BsnI	GGCC	4 cut(s)	999, 1245, 1368, 1767
Bso31I	GGTCTC	1 cut(s)	239
Bsp119I	TTCGAA	1 cut(s)	1132
Bsp1286I	GDGCHC	4 cut(s)	116, 757, 1505, 2104
Bsp13I	TCCGGA	2 cut(s)	1663, 2042
Bsp1407I	TGTACA	1 cut(s)	1843
Bsp143I	GATC	8 cut(s)	192, 197, 508, 838, 1669, 1788, 2002, 2061
Bsp1720I	GCTNAGC	1 cut(s)	426
BspACI	CCGC	5 cut(s)	185, 337, 601, 1481, 1725
BspANI	GGCC	4 cut(s)	999, 1245, 1368, 1767
BspCNI	CTCAG	8 cut(s)	23, 102, 118, 202, 439, 439, 628, 1159
BspEI	TCCGGA	2 cut(s)	1663, 2042
BspLI	GGNNCC	4 cut(s)	165, 259, 1369, 2010
BspOI	GCTAGC	1 cut(s)	1320
BspPI	GGATC	5 cut(s)	205, 516, 1677, 1783, 2056
BspQI	GCTCTTC	1 cut(s)	1974
BspT104I	TTCGAA	1 cut(s)	1132
BspT107I	GGYRCC	1 cut(s)	257
BspTNI	GGTCTC	1 cut(s)	239
BsrDI	GCAATG	2 cut(s)	890, 1472
BsrFI	RCCGGY	1 cut(s)	181
BsrGI	TGTACA	1 cut(s)	1843
BsrI	ACTGG	5 cut(s)	36, 492, 754, 935, 1352
BssAI	RCCGGY	1 cut(s)	181
BssECI	CCNNGG	2 cut(s)	228, 994
BssMI	GATC	8 cut(s)	192, 197, 508, 838, 1669, 1788, 2002, 2061
BssT1I	CCWWGG	1 cut(s)	994
Bst2UI	CCWGG	3 cut(s)	1561, 1938, 2088
Bst4CI	ACNGT	3 cut(s)	141, 763, 1817
Bst6I	CTCTTC	3 cut(s)	1689, 1784, 1974
BstAPI	GCANNNNNTGC	2 cut(s)	697, 1433
BstAUI	TGTACA	1 cut(s)	1843
BstBI	TTCGAA	1 cut(s)	1132
BstC8I	GCNNGC	6 cut(s)	183, 594, 1254, 1318, 1434, 1481
BstDEI	CTNAG	9 cut(s)	10, 110, 126, 189, 426, 447, 636, 1146, 1867
BstF5I	GGATG	8 cut(s)	487, 631, 700, 779, 823, 1151, 1612, 1696
BstHHI	GCGC	2 cut(s)	875, 1479
BstKTI	GATC	8 cut(s)	195, 200, 511, 841, 1672, 1791, 2005, 2064
BstMAI	GTCTC	6 cut(s)	44, 199, 239, 609, 896, 1265
BstMBI	GATC	8 cut(s)	192, 197, 508, 838, 1669, 1788, 2002, 2061
BstMWI	GCNNNNNNNGC	6 cut(s)	589, 697, 1226, 1433, 1469, 1993
BstNI	CCWGG	3 cut(s)	1561, 1938, 2088
BstSCI	CCNGG	3 cut(s)	1559, 1936, 2086
BstSLI	GKGCMC	2 cut(s)	757, 2104
BstV1I	GCAGC	5 cut(s)	190, 940, 1105, 1983, 1996
BstX2I	RGATCY	4 cut(s)	197, 508, 1669, 2002
BstXI	CCANNNNNNTGG	1 cut(s)	611
BstYI	RGATCY	4 cut(s)	197, 508, 1669, 2002
Bsu36I	CCTNAGG	2 cut(s)	447, 636
BsuI	GTATCC	1 cut(s)	1557
BsuRI	GGCC	4 cut(s)	999, 1245, 1368, 1767
BtsCI	GGATG	8 cut(s)	487, 631, 700, 779, 823, 1151, 1612, 1696
BtsI	GCAGTG	1 cut(s)	543
BtsIMutI	CAGTG	3 cut(s)	107, 499, 543
Cac8I	GCNNGC	6 cut(s)	183, 594, 1254, 1318, 1434, 1481
CfoI	GCGC	2 cut(s)	875, 1479
Cfr10I	RCCGGY	1 cut(s)	181
Cfr13I	GGNCC	2 cut(s)	225, 1367
CseI	GACGC	1 cut(s)	326
Csp6I	GTAC	3 cut(s)	1224, 1613, 1844
CviAII	CATG	3 cut(s)	515, 523, 1786
CviQI	GTAC	3 cut(s)	1224, 1613, 1844
DdeI	CTNAG	9 cut(s)	10, 110, 126, 189, 426, 447, 636, 1146, 1867
DpnI	GATC	8 cut(s)	194, 199, 510, 840, 1671, 1790, 2004, 2063
DpnII	GATC	8 cut(s)	192, 197, 508, 838, 1669, 1788, 2002, 2061
DraI	TTTAAA	1 cut(s)	75
EaeI	YGGCCR	1 cut(s)	1243
Eam1104I	CTCTTC	3 cut(s)	1689, 1784, 1974
EarI	CTCTTC	3 cut(s)	1689, 1784, 1974
EciI	GGCGGA	1 cut(s)	590
Ecl136II	GAGCTC	1 cut(s)	114
Eco130I	CCWWGG	1 cut(s)	994
Eco24I	GRGCYC	2 cut(s)	116, 1505
Eco31I	GGTCTC	1 cut(s)	239
Eco47I	GGWCC	1 cut(s)	225
Eco53kI	GAGCTC	1 cut(s)	114
Eco57I	CTGAAG	3 cut(s)	452, 585, 2046
Eco81I	CCTNAGG	2 cut(s)	447, 636
EcoICRI	GAGCTC	1 cut(s)	114
EcoO109I	RGGNCCY	1 cut(s)	1367
EcoRI	GAATTC	1 cut(s)	859
EcoRII	CCWGG	3 cut(s)	1559, 1936, 2086
EcoT14I	CCWWGG	1 cut(s)	994
EcoT22I	ATGCAT	3 cut(s)	585, 702, 1633
EcoT38I	GRGCYC	2 cut(s)	116, 1505
ErhI	CCWWGG	1 cut(s)	994
Esp3I	CGTCTC	1 cut(s)	199
FaeI	CATG	3 cut(s)	518, 526, 1789
FalI	AAGNNNNNCTT	6 cut(s)	707, 739, 1824, 1856, 1971, 2003
FatI	CATG	3 cut(s)	514, 522, 1785
FauI	CCCGC	2 cut(s)	1488, 1732
FauNDI	CATATG	2 cut(s)	579, 696
FbaI	TGATCA	1 cut(s)	838
Fnu4HI	GCNGC	7 cut(s)	179, 186, 929, 1094, 1985, 1997, 2115
FokI	GGATG	8 cut(s)	494, 618, 687, 766, 810, 1138, 1619, 1703
FriOI	GRGCYC	2 cut(s)	116, 1505
Fsp4HI	GCNGC	7 cut(s)	179, 186, 929, 1094, 1985, 1997, 2115
FspBI	CTAG	8 cut(s)	1056, 1085, 1221, 1317, 1407, 1449, 2000, 2122
GlaI	GCGC	2 cut(s)	874, 1478
GluI	GCNGC	7 cut(s)	179, 186, 929, 1094, 1985, 1997, 2115
GsuI	CTGGAG	4 cut(s)	1335, 1407, 1512, 1543
HaeIII	GGCC	4 cut(s)	999, 1245, 1368, 1767
HapII	CCGG	6 cut(s)	182, 275, 506, 1664, 1764, 2043
HgaI	GACGC	1 cut(s)	326
HhaI	GCGC	2 cut(s)	875, 1479
Hin1II	CATG	3 cut(s)	518, 526, 1789
Hin6I	GCGC	2 cut(s)	873, 1477
HinP1I	GCGC	2 cut(s)	873, 1477
HindIII	AAGCTT	3 cut(s)	154, 358, 1430
HinfI	GANTC	7 cut(s)	104, 218, 325, 1019, 1184, 1923, 2039
HpaII	CCGG	6 cut(s)	182, 275, 506, 1664, 1764, 2043
HphI	GGTGA	4 cut(s)	511, 723, 1384, 1952
Hpy166II	GTNNAC	7 cut(s)	408, 755, 1301, 1329, 1419, 1846, 1943
Hpy8I	GTNNAC	7 cut(s)	408, 755, 1301, 1329, 1419, 1846, 1943
Hpy99I	CGWCG	1 cut(s)	1295
HpyAV	CCTTC	7 cut(s)	61, 560, 607, 803, 1000, 1128, 1394
HpyCH4III	ACNGT	3 cut(s)	141, 763, 1817
HpyCH4IV	ACGT	1 cut(s)	807
HpyCH4V	TGCA	8 cut(s)	95, 536, 583, 686, 700, 755, 1256, 1631
HpyF10VI	GCNNNNNNNGC	6 cut(s)	589, 697, 1226, 1433, 1469, 1993
HpyF3I	CTNAG	9 cut(s)	10, 110, 126, 189, 426, 447, 636, 1146, 1867
HpySE526I	ACGT	1 cut(s)	807
Hsp92II	CATG	3 cut(s)	518, 526, 1789
HspAI	GCGC	2 cut(s)	873, 1477
Kpn2I	TCCGGA	2 cut(s)	1663, 2042
KroI	GCCGGC	1 cut(s)	181
KroNI	GCCGGC	1 cut(s)	183
Ksp22I	TGATCA	1 cut(s)	838
Kzo9I	GATC	8 cut(s)	192, 197, 508, 838, 1669, 1788, 2002, 2061
LguI	GCTCTTC	1 cut(s)	1974
LmnI	GCTCC	9 cut(s)	90, 119, 163, 1046, 1090, 1562, 1714, 1837, 1939
Lsp1109I	GCAGC	5 cut(s)	190, 940, 1105, 1983, 1996
LweI	GCATC	5 cut(s)	342, 523, 709, 788, 1640
MaeI	CTAG	8 cut(s)	1056, 1085, 1221, 1317, 1407, 1449, 2000, 2122
MaeII	ACGT	1 cut(s)	807
MaeIII	GTNAC	3 cut(s)	146, 416, 517
MalI	GATC	8 cut(s)	194, 199, 510, 840, 1671, 1790, 2004, 2063
MboI	GATC	8 cut(s)	192, 197, 508, 838, 1669, 1788, 2002, 2061
MfeI	CAATTG	1 cut(s)	1635
MflI	RGATCY	4 cut(s)	197, 508, 1669, 2002
MhlI	GDGCHC	4 cut(s)	116, 757, 1505, 2104
MlsI	TGGCCA	1 cut(s)	1245
MluNI	TGGCCA	1 cut(s)	1245
MlyI	GAGTC	3 cut(s)	98, 1028, 1193
MmeI	TCCRAC	2 cut(s)	1286, 2016
Mox20I	TGGCCA	1 cut(s)	1245
Mph1103I	ATGCAT	3 cut(s)	585, 702, 1633
MroI	TCCGGA	2 cut(s)	1663, 2042
MroNI	GCCGGC	1 cut(s)	181
MroXI	GAANNNNTTC	1 cut(s)	1171
MscI	TGGCCA	1 cut(s)	1245
MseI	TTAA	6 cut(s)	74, 392, 477, 714, 1029, 2070
MslI	CAYNNNNRTG	2 cut(s)	255, 1583
Msp20I	TGGCCA	1 cut(s)	1245
MspA1I	CMGCKG	1 cut(s)	430
MspI	CCGG	6 cut(s)	182, 275, 506, 1664, 1764, 2043
MspR9I	CCNGG	3 cut(s)	1561, 1938, 2088
MunI	CAATTG	1 cut(s)	1635
Mva1269I	GAATGC	1 cut(s)	1320
MvaI	CCWGG	3 cut(s)	1561, 1938, 2088
MwoI	GCNNNNNNNGC	6 cut(s)	589, 697, 1226, 1433, 1469, 1993
NaeI	GCCGGC	1 cut(s)	183
NdeI	CATATG	2 cut(s)	579, 696
NdeII	GATC	8 cut(s)	192, 197, 508, 838, 1669, 1788, 2002, 2061
NgoMIV	GCCGGC	1 cut(s)	181
NheI	GCTAGC	1 cut(s)	1316
NlaIII	CATG	3 cut(s)	518, 526, 1789
NlaIV	GGNNCC	4 cut(s)	165, 259, 1369, 2010
NmuCI	GTSAC	3 cut(s)	146, 416, 517
NsiI	ATGCAT	3 cut(s)	585, 702, 1633
NspV	TTCGAA	1 cut(s)	1132
OliI	CACNNNNGTG	1 cut(s)	1583
PciSI	GCTCTTC	1 cut(s)	1974
PctI	GAATGC	1 cut(s)	1320
PdiI	GCCGGC	1 cut(s)	183
PdmI	GAANNNNTTC	1 cut(s)	1171
PfeI	GAWTC	4 cut(s)	218, 325, 1923, 2039
PkrI	GCNGC	7 cut(s)	180, 187, 930, 1095, 1986, 1998, 2116
PleI	GAGTC	3 cut(s)	98, 1027, 1192
PpsI	GAGTC	3 cut(s)	98, 1027, 1192
Psp124BI	GAGCTC	1 cut(s)	116
Psp6I	CCWGG	3 cut(s)	1559, 1936, 2086
PspGI	CCWGG	3 cut(s)	1559, 1936, 2086
PspN4I	GGNNCC	4 cut(s)	165, 259, 1369, 2010
PspPI	GGNCC	2 cut(s)	225, 1367
PsuI	RGATCY	4 cut(s)	197, 508, 1669, 2002
PvuII	CAGCTG	1 cut(s)	430
RsaI	GTAC	3 cut(s)	1225, 1614, 1845
RsaNI	GTAC	3 cut(s)	1224, 1613, 1844
RseI	CAYNNNNRTG	2 cut(s)	255, 1583
SacI	GAGCTC	1 cut(s)	116
SapI	GCTCTTC	1 cut(s)	1974
SaqAI	TTAA	6 cut(s)	74, 392, 477, 714, 1029, 2070
SatI	GCNGC	7 cut(s)	179, 186, 929, 1094, 1985, 1997, 2115
Sau3AI	GATC	8 cut(s)	192, 197, 508, 838, 1669, 1788, 2002, 2061
Sau96I	GGNCC	2 cut(s)	225, 1367
ScaI	AGTACT	2 cut(s)	1225, 1614
SchI	GAGTC	3 cut(s)	98, 1028, 1193
ScrFI	CCNGG	3 cut(s)	1561, 1938, 2088
SduI	GDGCHC	4 cut(s)	116, 757, 1505, 2104
SfaNI	GCATC	5 cut(s)	342, 523, 709, 788, 1640
SfuI	TTCGAA	1 cut(s)	1132
SinI	GGWCC	1 cut(s)	225
SmiMI	CAYNNNNRTG	2 cut(s)	255, 1583
SmlI	CTYRAG	2 cut(s)	737, 1685
SmoI	CTYRAG	2 cut(s)	737, 1685
SpeI	ACTAGT	1 cut(s)	1084
SsiI	CCGC	5 cut(s)	185, 337, 601, 1481, 1725
SspI	AATATT	1 cut(s)	1171
SspMI	CTAG	8 cut(s)	1056, 1085, 1221, 1317, 1407, 1449, 2000, 2122
SstI	GAGCTC	1 cut(s)	116
StyD4I	CCNGG	3 cut(s)	1559, 1936, 2086
StyI	CCWWGG	1 cut(s)	994
TaaI	ACNGT	3 cut(s)	141, 763, 1817
TaiI	ACGT	1 cut(s)	810
TaqI	TCGA	7 cut(s)	102, 306, 323, 1132, 1165, 1782, 2109
TatI	WGTACW	3 cut(s)	1223, 1612, 1843
TauI	GCSGC	1 cut(s)	188
TfiI	GAWTC	4 cut(s)	218, 325, 1923, 2039
Tru1I	TTAA	6 cut(s)	74, 392, 477, 714, 1029, 2070
Tru9I	TTAA	6 cut(s)	74, 392, 477, 714, 1029, 2070
TscAI	CASTG	3 cut(s)	114, 499, 543
TseFI	GTSAC	3 cut(s)	146, 416, 517
TseI	GCWGC	6 cut(s)	178, 928, 1093, 1984, 1996, 2114
Tsp45I	GTSAC	3 cut(s)	146, 416, 517
TspDTI	ATGAA	9 cut(s)	503, 515, 539, 660, 831, 1623, 1707, 1826, 1986
TspGWI	ACGGA	3 cut(s)	134, 410, 1033
TspRI	CASTG	3 cut(s)	114, 499, 543
VneI	GTGCAC	1 cut(s)	753
VpaK11BI	GGWCC	1 cut(s)	225
XapI	RAATTY	6 cut(s)	648, 853, 859, 1024, 1571, 1719
XmnI	GAANNNNTTC	1 cut(s)	1171
XspI	CTAG	8 cut(s)	1056, 1085, 1221, 1317, 1407, 1449, 2000, 2122
ZrmI	AGTACT	2 cut(s)	1225, 1614
Zsp2I	ATGCAT	3 cut(s)	585, 702, 1633

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.