Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0005328

Physical Location & Seq

Genomic Coordinates Reverse (-)

18507211 .. 18510500

Gene Structure 3290 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000012407

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

ATGAGTTCCTCAGAGACCCAAGAAGGTTCAGATCTGGCTCTGAAATTCAAATCGAAGAAACCTTTAACCCAAACGAAGCCCCAATCGGTGGAGAAAGACCAGATTTTGACCGCACCGACGCCGGAGAAGACCCTGCAGCCCGCGCCGCCGCGAGCTAGGAACCGGAACTTCGCGCTGTCCATCGGAGAAATCAGGAGAGCCGCAGCGAAAAGCGTCGGCGAGAAGAAGGAGCAGATCGGATCTGCCAGACGGCAAATCGCTTGGCCGGAGGAGAATCCGAAGAAGGCCCGTGTCGGGGCCCCGAAAAAGCTACCGGAGAAGTTTGAAATGTTGGGTGAGTTTTTCAATTGCTTGGATAGTTCGATTCGGTTGTTGAGGTCTAAGGGATTGAAGACGAGCTTCAGGAACATCTGCCCTGCGGTTGAGGATTTGACTGATAGGAGGTTTACATATAGTCACTTGGCTCAGATGAAGTTTATTTTACCTGAGGTGATTGAGATAAAGAAAGTGCTTGTGTTGGATGAGCGAACCAGTTGTTTGAAGCCGGATCTTCATGTTACCTTGAATGTTCAAGCATTAGAGAACGATGGCAAGTCGAAATCTGAAGGTGGGGGCATTGTGCAGTTGAAGAAGACACTGAATTTGAGAAGGATGTTCCGTGATCGGCTTGTGCAGGTTTCGAGATCGTATCCTGAGGATTATGAAATTCCGGAAGAAAATCTGCCCCATCCATTCAACTGTGGCAAGCAAGATATACATAGGGTCAAGTTTTCCTCCTCATCCTCTCCTGGGGAGGTGTCAACTGATGTAGACACAGTTGAGCAACCAGCAGTTTTTAAGACCTGCCTTCAGGGTGATGAAATTCCAGATGAAACACATCAAACGCCATCTAATCAATCAACGGAGGATTTGAATTTTAACATAATCAGAACTCCCAGTGTTCCATTGCCTATTAAGACATCATTTGAAGCACCTAAAAATCTGCAACCAGAAACAGCATCTCATCTTTCGCTATCTTTTCGAAGGCACTTTTCTGAGAAAGCTAAACACAGTGAGTCAGAGAACATACAGGATGATCCACCGAAGGCATCCCTCCGAGCTTCAAATCTTTCAGTTTCAGAGTCAAATCTCAATACAGTTTTCTCTGTTAAGGAAGATGGTATTGCTGCTTCTTCACATGGTCAAGTGCTCAATACAGTTTGCTCTGTTATGGAAGATAGTATTGCTGCTTCTTCCCATGGTCAAGAGCTTGCAACCCCAACCAAAAAGATAGACCCTTTAGAGGATGATGGTTTGCCTGGAAATAATACTGCCATTCAGTCTGCTCCAGGAAAGCTTGCTTCAACTCCAGCAAAGCTTGTTTCCTCTCCAGCAAAGTTGATGTCCATCACACCTGCAAAGCTTGTTTCCTCTCCAGCAAAGTTGATGTCCATCACACCTGCACCGCACCCACCAAAGCGATGTTTTATGAGCCCAGAGGATAGCTCACCGAACAAGTTGGTCAGGCGTCCTCCACGCACCAGGTCGTTGAAATTTGACACTCCTGTGAAGAGTAGAAATGCTGAAGATGAAGTTCTTGATACGGATGACGCATCAATGGATAAAGACATTCTTGATATTCTTCCTAGGGATCTTTTGGAATCGCTTAGAGATAAGGAGAGGAAGGCAACAGAGGAGAGAAATCCAGCCATCTCACAAGCTAAGAGGCGGCAGAAAATGATTGCCAACCTGCCTAAACTCTTTAACATGATTCACTTCCTAGTTCAGTCAATGAACCGTTCTTTTATCACCAAACAGGAGCTTGTACACAAGATAATTTGGAACCATTGTGACATGATTGACAGAAAGGATGTTGAAGAGCAACTAAATTTACTGCTAGAATTGGTTCCAGACTGGATTTCTGAAAAGAAACTTGGAGGAGATTTGCTTTTCAACATTAATAAAAGATCATGTCCTGAGGCAATACGTTCCCGTCTTGAAGAAGCAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000075 GO:0000076 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0031570 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045786 GO:0046483 GO:0048229 GO:0048519 GO:0048523 GO:0048856 GO:0050789 GO:0050794 GO:0051276 GO:0051726 GO:0065007 GO:0070182 GO:0071704 GO:0071840 GO:0090304 GO:0097472 GO:0140096 GO:1901360 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CDT1 CDT1_C

Protein Analysis

664

Amino Acids

74.15

Weight (kDa)

8.71

Isoelectric Point (pI)

65.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CDT1	PF08839	104 - 226	3.5e-13	DNA replication factor CDT1 like
CDT1_C	PF16679	544 - 638	4.4e-23	DNA replication factor Cdt1 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005328)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31270
fragaria_vesca	FvH4_2g21720 FvH4_2g21720 FvH4_2g21720 FvH4_2g21720
malus_domestica	MD05G1158100.v1.1 MD05G1191600.v1.1 MD05G1199700.v1.1 MD10G1150900.v1.1 MD10G1178300.v1.1
prunus_persica	Prupe.8G189500_v2.0.a1 Prupe.8G217800_v2.0.a1 Prupe.8G225500_v2.0.a1 Prupe.8G225500_v2.0.a1
pyrus_communis	pycom05g15010 pycom05g18610 pycom10g12990 pycom10g13000 pycom10g15480
rosa_chinensis	RchiOBHm_Chr6g0288401
rosa_laevigata	RLG00000012407
rosa_multiflora	Rmu_sc0001038.1_g000012
rosa_roxburghii	Rroxscaffold_7G00180090
rosa_rugosa	Rorug06G0196200
rosa_samantha	Rh6AG307200 Rh6BG313200 Rh6CG321000 Rh6DG306400
rosa_wichuraiana	Rw6G026580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1402, 1447
Acc36I	ACCTGC	5 cut(s)	664, 851, 1402, 1447, 1737
AccB7I	CCANNNNNTGG	1 cut(s)	88
AccI	GTMKAC	1 cut(s)	810
AccII	CGCG	3 cut(s)	143, 151, 173
AccIII	TCCGGA	1 cut(s)	709
AciI	CCGC	8 cut(s)	111, 141, 146, 149, 201, 419, 1445, 1708
AclWI	GGATC	4 cut(s)	247, 555, 1070, 1638
AcoI	YGGCCR	1 cut(s)	263
AcsI	RAATTY	7 cut(s)	44, 640, 705, 861, 913, 1532, 1867
AcuI	CTGAAG	4 cut(s)	385, 624, 833, 1584
AcyI	GRCGYC	2 cut(s)	119, 1507
AfaI	GTAC	1 cut(s)	1806
AfiI	CCNNNNNNNGG	5 cut(s)	88, 294, 295, 789, 1282
AjnI	CCWGG	4 cut(s)	787, 1297, 1327, 1520
AjuI	GAANNNNNNNTTGG	2 cut(s)	1896, 1928
AleI	CACNNNNGTG	1 cut(s)	1544
Alw21I	GWGCWC	1 cut(s)	1191
Alw26I	GTCTC	1 cut(s)	8
AlwI	GGATC	4 cut(s)	247, 555, 1070, 1638
Aor13HI	TCCGGA	1 cut(s)	709
AoxI	GGCC	3 cut(s)	263, 285, 297
ApaI	GGGCCC	1 cut(s)	301
ApeKI	GCWGC	4 cut(s)	136, 203, 1166, 1226
ApoI	RAATTY	7 cut(s)	44, 640, 705, 861, 913, 1532, 1867
ArsI	GACNNNNNNTTYG	6 cut(s)	625, 657, 1367, 1399, 1412, 1444
AseI	ATTAAT	1 cut(s)	1938
Asp700I	GAANNNNTTC	1 cut(s)	1884
AspA2I	CCTAGG	1 cut(s)	1625
AspLEI	GCGC	2 cut(s)	145, 175
AspS9I	GGNCC	3 cut(s)	286, 297, 298
AsuHPI	GGTGA	5 cut(s)	347, 502, 866, 1479, 1780
AsuII	TTCGAA	1 cut(s)	1021
AvrII	CCTAGG	1 cut(s)	1625
AxyI	CCTNAGG	3 cut(s)	486, 693, 1956
BaeGI	GKGCMC	1 cut(s)	301
BanII	GRGCYC	2 cut(s)	301, 1475
BarI	GAAGNNNNNNTAC	4 cut(s)	1153, 1185, 1213, 1245
BbsI	GAAGAC	3 cut(s)	134, 398, 638
Bbv12I	GWGCWC	1 cut(s)	1191
BbvI	GCAGC	4 cut(s)	148, 215, 1153, 1213
BccI	CCATC	9 cut(s)	188, 581, 735, 895, 1151, 1283, 1394, 1439, 1697
BceAI	ACGGC	1 cut(s)	266
BciT130I	CCWGG	4 cut(s)	789, 1299, 1329, 1522
BciVI	GTATCC	1 cut(s)	699
BcoDI	GTCTC	1 cut(s)	8
BfaI	CTAG	4 cut(s)	156, 1626, 1760, 1877
BfmI	CTRYAG	1 cut(s)	134
BfuAI	ACCTGC	5 cut(s)	664, 851, 1402, 1447, 1737
BfuI	GTATCC	1 cut(s)	699
BglII	AGATCT	1 cut(s)	31
BisI	GCNGC	8 cut(s)	137, 146, 149, 201, 204, 1167, 1227, 1709
BlnI	CCTAGG	1 cut(s)	1625
BlsI	GCNGC	8 cut(s)	138, 147, 150, 202, 205, 1168, 1228, 1710
Bme1390I	CCNGG	4 cut(s)	789, 1299, 1329, 1522
BmgT120I	GGNCC	3 cut(s)	286, 297, 298
BmiI	GGNNCC	6 cut(s)	161, 298, 299, 300, 1823, 1887
BmrFI	CCNGG	4 cut(s)	789, 1299, 1329, 1522
BmrI	ACTGGG	1 cut(s)	930
BmsI	GCATC	3 cut(s)	1007, 1097, 1601
BmuI	ACTGGG	1 cut(s)	930
BpiI	GAAGAC	3 cut(s)	134, 398, 638
BplI	GAGNNNNNCTC	2 cut(s)	1469, 1501
BpmI	CTGGAG	4 cut(s)	1311, 1332, 1353, 1398
Bpu14I	TTCGAA	1 cut(s)	1021
BsaBI	GATNNNNATC	2 cut(s)	1385, 1430
BsaHI	GRCGYC	2 cut(s)	119, 1507
BsaI	GGTCTC	1 cut(s)	8
BsaJI	CCNNGG	3 cut(s)	788, 1237, 1625
BsaWI	WCCGGW	3 cut(s)	162, 313, 709
Bsc4I	CCNNNNNNNGG	5 cut(s)	88, 294, 295, 789, 1282
Bse1I	ACTGG	3 cut(s)	531, 936, 1898
Bse21I	CCTNAGG	3 cut(s)	486, 693, 1956
Bse3DI	GCAATG	1 cut(s)	944
Bse8I	GATNNNNATC	2 cut(s)	1385, 1430
BseAI	TCCGGA	1 cut(s)	709
BseBI	CCWGG	4 cut(s)	789, 1299, 1329, 1522
BseDI	CCNNGG	3 cut(s)	788, 1237, 1625
BseGI	GGATG	9 cut(s)	526, 657, 727, 779, 1078, 1088, 1291, 1591, 1855
BseJI	GATNNNNATC	2 cut(s)	1385, 1430
BseLI	CCNNNNNNNGG	5 cut(s)	88, 294, 295, 789, 1282
BseMI	GCAATG	1 cut(s)	944
BseMII	CTCAG	6 cut(s)	24, 477, 479, 684, 1026, 1947
BseNI	ACTGG	3 cut(s)	531, 936, 1898
BseRI	GAGGAG	4 cut(s)	284, 766, 1688, 1932
BseSI	GKGCMC	1 cut(s)	301
BseXI	GCAGC	4 cut(s)	148, 215, 1153, 1213
BsgI	GTGCAG	3 cut(s)	641, 692, 1425
Bsh1236I	CGCG	3 cut(s)	143, 151, 173
BshFI	GGCC	3 cut(s)	265, 287, 299
BsiHKAI	GWGCWC	1 cut(s)	1191
BsiSI	CCGG	6 cut(s)	122, 163, 266, 314, 545, 710
BslI	CCNNNNNNNGG	5 cut(s)	88, 294, 295, 789, 1282
BsmAI	GTCTC	1 cut(s)	8
BsnI	GGCC	3 cut(s)	265, 287, 299
Bso31I	GGTCTC	1 cut(s)	8
Bsp119I	TTCGAA	1 cut(s)	1021
Bsp120I	GGGCCC	1 cut(s)	297
Bsp1286I	GDGCHC	3 cut(s)	301, 1191, 1475
Bsp13I	TCCGGA	1 cut(s)	709
Bsp1407I	TGTACA	1 cut(s)	1804
Bsp143I	GATC	9 cut(s)	31, 234, 239, 547, 661, 683, 1075, 1630, 1946
Bsp19I	CCATGG	1 cut(s)	1237
BspACI	CCGC	8 cut(s)	111, 141, 146, 149, 201, 419, 1445, 1708
BspANI	GGCC	3 cut(s)	265, 287, 299
BspCNI	CTCAG	6 cut(s)	23, 478, 478, 685, 1027, 1948
BspEI	TCCGGA	1 cut(s)	709
BspFNI	CGCG	3 cut(s)	143, 151, 173
BspLI	GGNNCC	6 cut(s)	161, 298, 299, 300, 1823, 1887
BspMAI	CTGCAG	1 cut(s)	138
BspMI	ACCTGC	5 cut(s)	664, 851, 1402, 1447, 1737
BspPI	GGATC	4 cut(s)	247, 555, 1070, 1638
BspQI	GCTCTTC	1 cut(s)	1851
BspT104I	TTCGAA	1 cut(s)	1021
BspTNI	GGTCTC	1 cut(s)	8
BsrDI	GCAATG	1 cut(s)	944
BsrGI	TGTACA	1 cut(s)	1804
BsrI	ACTGG	3 cut(s)	531, 936, 1898
BssECI	CCNNGG	3 cut(s)	788, 1237, 1625
BssMI	GATC	9 cut(s)	31, 234, 239, 547, 661, 683, 1075, 1630, 1946
BssNI	GRCGYC	2 cut(s)	119, 1507
BssT1I	CCWWGG	2 cut(s)	1237, 1625
Bst2UI	CCWGG	4 cut(s)	789, 1299, 1329, 1522
Bst4CI	ACNGT	6 cut(s)	740, 817, 1052, 1138, 1198, 1778
Bst6I	CTCTTC	2 cut(s)	1544, 1851
BstACI	GRCGYC	2 cut(s)	119, 1507
BstAUI	TGTACA	1 cut(s)	1804
BstBI	TTCGAA	1 cut(s)	1021
BstC8I	GCNNGC	5 cut(s)	141, 153, 746, 1251, 1338
BstDEI	CTNAG	9 cut(s)	10, 381, 465, 486, 693, 1035, 1646, 1701, 1956
BstDSI	CCRYGG	1 cut(s)	1237
BstF5I	GGATG	9 cut(s)	526, 657, 727, 779, 1078, 1088, 1291, 1591, 1855
BstFNI	CGCG	3 cut(s)	143, 151, 173
BstHHI	GCGC	2 cut(s)	145, 175
BstKTI	GATC	9 cut(s)	34, 237, 242, 550, 664, 686, 1078, 1633, 1949
BstMAI	GTCTC	1 cut(s)	8
BstMBI	GATC	9 cut(s)	31, 234, 239, 547, 661, 683, 1075, 1630, 1946
BstMWI	GCNNNNNNNGC	2 cut(s)	142, 145
BstNI	CCWGG	4 cut(s)	789, 1299, 1329, 1522
BstSCI	CCNGG	4 cut(s)	787, 1297, 1327, 1520
BstSFI	CTRYAG	1 cut(s)	134
BstSLI	GKGCMC	1 cut(s)	301
BstUI	CGCG	3 cut(s)	143, 151, 173
BstV1I	GCAGC	4 cut(s)	148, 215, 1153, 1213
BstV2I	GAAGAC	3 cut(s)	134, 398, 638
BstX2I	RGATCY	4 cut(s)	31, 239, 547, 1630
BstYI	RGATCY	4 cut(s)	31, 239, 547, 1630
Bsu36I	CCTNAGG	3 cut(s)	486, 693, 1956
BsuI	GTATCC	1 cut(s)	699
BsuRI	GGCC	3 cut(s)	265, 287, 299
BtgI	CCRYGG	1 cut(s)	1237
BtgZI	GCGATG	1 cut(s)	1474
BtsCI	GGATG	9 cut(s)	526, 657, 727, 779, 1078, 1088, 1291, 1591, 1855
BtsIMutI	CAGTG	3 cut(s)	635, 943, 1057
BveI	ACCTGC	5 cut(s)	664, 851, 1402, 1447, 1737
Cac8I	GCNNGC	5 cut(s)	141, 153, 746, 1251, 1338
CfoI	GCGC	2 cut(s)	145, 175
Cfr13I	GGNCC	3 cut(s)	286, 297, 298
CseI	GACGC	4 cut(s)	127, 202, 1496, 1598
CsiI	ACCWGGT	1 cut(s)	1520
Csp6I	GTAC	1 cut(s)	1805
CviAII	CATG	6 cut(s)	554, 1178, 1238, 1747, 1834, 1950
CviQI	GTAC	1 cut(s)	1805
DdeI	CTNAG	9 cut(s)	10, 381, 465, 486, 693, 1035, 1646, 1701, 1956
DpnI	GATC	9 cut(s)	33, 236, 241, 549, 663, 685, 1077, 1632, 1948
DpnII	GATC	9 cut(s)	31, 234, 239, 547, 661, 683, 1075, 1630, 1946
EaeI	YGGCCR	1 cut(s)	263
Eam1104I	CTCTTC	2 cut(s)	1544, 1851
EarI	CTCTTC	2 cut(s)	1544, 1851
Eco130I	CCWWGG	2 cut(s)	1237, 1625
Eco24I	GRGCYC	2 cut(s)	301, 1475
Eco31I	GGTCTC	1 cut(s)	8
Eco57I	CTGAAG	4 cut(s)	385, 624, 833, 1584
Eco81I	CCTNAGG	3 cut(s)	486, 693, 1956
EcoO109I	RGGNCCY	2 cut(s)	297, 298
EcoRII	CCWGG	4 cut(s)	787, 1297, 1327, 1520
EcoT14I	CCWWGG	2 cut(s)	1237, 1625
EcoT38I	GRGCYC	2 cut(s)	301, 1475
ErhI	CCWWGG	2 cut(s)	1237, 1625
FaeI	CATG	6 cut(s)	557, 1181, 1241, 1750, 1837, 1953
FalI	AAGNNNNNCTT	4 cut(s)	383, 415, 1596, 1628
FatI	CATG	6 cut(s)	553, 1177, 1237, 1746, 1833, 1949
FauI	CCCGC	1 cut(s)	148
FblI	GTMKAC	1 cut(s)	810
Fnu4HI	GCNGC	8 cut(s)	137, 146, 149, 201, 204, 1167, 1227, 1709
FokI	GGATG	9 cut(s)	533, 664, 714, 766, 1075, 1085, 1298, 1598, 1862
FriOI	GRGCYC	2 cut(s)	301, 1475
Fsp4HI	GCNGC	8 cut(s)	137, 146, 149, 201, 204, 1167, 1227, 1709
FspBI	CTAG	4 cut(s)	156, 1626, 1760, 1877
GlaI	GCGC	2 cut(s)	144, 174
GluI	GCNGC	8 cut(s)	137, 146, 149, 201, 204, 1167, 1227, 1709
GsuI	CTGGAG	4 cut(s)	1311, 1332, 1353, 1398
HaeIII	GGCC	3 cut(s)	265, 287, 299
HapII	CCGG	6 cut(s)	122, 163, 266, 314, 545, 710
HgaI	GACGC	4 cut(s)	127, 202, 1496, 1598
HhaI	GCGC	2 cut(s)	145, 175
Hin1I	GRCGYC	2 cut(s)	119, 1507
Hin1II	CATG	6 cut(s)	557, 1181, 1241, 1750, 1837, 1953
Hin6I	GCGC	2 cut(s)	143, 173
HinP1I	GCGC	2 cut(s)	143, 173
HincII	GTYRAC	1 cut(s)	801
HindII	GTYRAC	1 cut(s)	801
HindIII	AAGCTT	3 cut(s)	1334, 1355, 1400
HinfI	GANTC	6 cut(s)	274, 364, 1055, 1121, 1640, 1750
HpaII	CCGG	6 cut(s)	122, 163, 266, 314, 545, 710
HphI	GGTGA	5 cut(s)	347, 502, 866, 1479, 1780
Hpy166II	GTNNAC	4 cut(s)	447, 801, 811, 1807
Hpy8I	GTNNAC	4 cut(s)	447, 801, 811, 1807
Hpy99I	CGWCG	2 cut(s)	121, 218
HpyAV	CCTTC	9 cut(s)	17, 220, 277, 599, 642, 857, 1017, 1078, 1657
HpyCH4III	ACNGT	6 cut(s)	740, 817, 1052, 1138, 1198, 1778
HpyCH4IV	ACGT	1 cut(s)	1966
HpyCH4V	TGCA	7 cut(s)	136, 622, 673, 985, 1253, 1397, 1442
HpyF10VI	GCNNNNNNNGC	2 cut(s)	142, 145
HpyF3I	CTNAG	9 cut(s)	10, 381, 465, 486, 693, 1035, 1646, 1701, 1956
HpySE526I	ACGT	1 cut(s)	1966
Hsp92I	GRCGYC	2 cut(s)	119, 1507
Hsp92II	CATG	6 cut(s)	557, 1181, 1241, 1750, 1837, 1953
HspAI	GCGC	2 cut(s)	143, 173
Kpn2I	TCCGGA	1 cut(s)	709
Kzo9I	GATC	9 cut(s)	31, 234, 239, 547, 661, 683, 1075, 1630, 1946
LguI	GCTCTTC	1 cut(s)	1851
LmnI	GCTCC	3 cut(s)	229, 1330, 1798
Lsp1109I	GCAGC	4 cut(s)	148, 215, 1153, 1213
LweI	GCATC	3 cut(s)	1007, 1097, 1601
MabI	ACCWGGT	1 cut(s)	1520
MaeI	CTAG	4 cut(s)	156, 1626, 1760, 1877
MaeII	ACGT	1 cut(s)	1966
MaeIII	GTNAC	3 cut(s)	455, 556, 1829
MalI	GATC	9 cut(s)	33, 236, 241, 549, 663, 685, 1077, 1632, 1948
MboI	GATC	9 cut(s)	31, 234, 239, 547, 661, 683, 1075, 1630, 1946
MfeI	CAATTG	1 cut(s)	346
MflI	RGATCY	4 cut(s)	31, 239, 547, 1630
MhlI	GDGCHC	3 cut(s)	301, 1191, 1475
MlyI	GAGTC	2 cut(s)	1064, 1130
MmeI	TCCRAC	1 cut(s)	498
MroI	TCCGGA	1 cut(s)	709
MroXI	GAANNNNTTC	1 cut(s)	1884
MseI	TTAA	7 cut(s)	65, 837, 918, 954, 1149, 1743, 1938
MslI	CAYNNNNRTG	1 cut(s)	1544
MspI	CCGG	6 cut(s)	122, 163, 266, 314, 545, 710
MspR9I	CCNGG	4 cut(s)	789, 1299, 1329, 1522
MunI	CAATTG	1 cut(s)	346
MvaI	CCWGG	4 cut(s)	789, 1299, 1329, 1522
MvnI	CGCG	3 cut(s)	143, 151, 173
MwoI	GCNNNNNNNGC	2 cut(s)	142, 145
NcoI	CCATGG	1 cut(s)	1237
NdeII	GATC	9 cut(s)	31, 234, 239, 547, 661, 683, 1075, 1630, 1946
NlaIII	CATG	6 cut(s)	557, 1181, 1241, 1750, 1837, 1953
NlaIV	GGNNCC	6 cut(s)	161, 298, 299, 300, 1823, 1887
NmuCI	GTSAC	2 cut(s)	455, 1829
NspV	TTCGAA	1 cut(s)	1021
OliI	CACNNNNGTG	1 cut(s)	1544
PaqCI	CACCTGC	2 cut(s)	1402, 1447
PciSI	GCTCTTC	1 cut(s)	1851
PdmI	GAANNNNTTC	1 cut(s)	1884
PfeI	GAWTC	4 cut(s)	274, 364, 1640, 1750
PflMI	CCANNNNNTGG	1 cut(s)	88
PfoI	TCCNGGA	1 cut(s)	1327
PkrI	GCNGC	8 cut(s)	138, 147, 150, 202, 205, 1168, 1228, 1710
PleI	GAGTC	2 cut(s)	1063, 1129
PpsI	GAGTC	2 cut(s)	1063, 1129
PshBI	ATTAAT	1 cut(s)	1938
Psp6I	CCWGG	4 cut(s)	787, 1297, 1327, 1520
PspGI	CCWGG	4 cut(s)	787, 1297, 1327, 1520
PspN4I	GGNNCC	6 cut(s)	161, 298, 299, 300, 1823, 1887
PspOMI	GGGCCC	1 cut(s)	297
PspPI	GGNCC	3 cut(s)	286, 297, 298
PstI	CTGCAG	1 cut(s)	138
PsuI	RGATCY	4 cut(s)	31, 239, 547, 1630
RsaI	GTAC	1 cut(s)	1806
RsaNI	GTAC	1 cut(s)	1805
RseI	CAYNNNNRTG	1 cut(s)	1544
SapI	GCTCTTC	1 cut(s)	1851
SaqAI	TTAA	7 cut(s)	65, 837, 918, 954, 1149, 1743, 1938
SatI	GCNGC	8 cut(s)	137, 146, 149, 201, 204, 1167, 1227, 1709
Sau3AI	GATC	9 cut(s)	31, 234, 239, 547, 661, 683, 1075, 1630, 1946
Sau96I	GGNCC	3 cut(s)	286, 297, 298
SchI	GAGTC	2 cut(s)	1064, 1130
ScrFI	CCNGG	4 cut(s)	789, 1299, 1329, 1522
SduI	GDGCHC	3 cut(s)	301, 1191, 1475
SexAI	ACCWGGT	1 cut(s)	1520
SfaNI	GCATC	3 cut(s)	1007, 1097, 1601
SfcI	CTRYAG	1 cut(s)	134
SfuI	TTCGAA	1 cut(s)	1021
SmiMI	CAYNNNNRTG	1 cut(s)	1544
SsiI	CCGC	8 cut(s)	111, 141, 146, 149, 201, 419, 1445, 1708
SspMI	CTAG	4 cut(s)	156, 1626, 1760, 1877
StyD4I	CCNGG	4 cut(s)	787, 1297, 1327, 1520
StyI	CCWWGG	2 cut(s)	1237, 1625
TaaI	ACNGT	6 cut(s)	740, 817, 1052, 1138, 1198, 1778
TaiI	ACGT	1 cut(s)	1969
TaqI	TCGA	5 cut(s)	53, 362, 596, 680, 1021
TatI	WGTACW	1 cut(s)	1804
TauI	GCSGC	4 cut(s)	148, 151, 203, 1711
TfiI	GAWTC	4 cut(s)	274, 364, 1640, 1750
Tru1I	TTAA	7 cut(s)	65, 837, 918, 954, 1149, 1743, 1938
Tru9I	TTAA	7 cut(s)	65, 837, 918, 954, 1149, 1743, 1938
TscAI	CASTG	3 cut(s)	642, 943, 1057
TseFI	GTSAC	2 cut(s)	455, 1829
TseI	GCWGC	4 cut(s)	136, 203, 1166, 1226
Tsp45I	GTSAC	2 cut(s)	455, 1829
TspDTI	ATGAA	7 cut(s)	485, 542, 717, 873, 885, 1584, 1787
TspGWI	ACGGA	3 cut(s)	647, 917, 1598
TspRI	CASTG	3 cut(s)	642, 943, 1057
Van91I	CCANNNNNTGG	1 cut(s)	88
VspI	ATTAAT	1 cut(s)	1938
XapI	RAATTY	7 cut(s)	44, 640, 705, 861, 913, 1532, 1867
XmaJI	CCTAGG	1 cut(s)	1625
XmiI	GTMKAC	1 cut(s)	810
XmnI	GAANNNNTTC	1 cut(s)	1884
XspI	CTAG	4 cut(s)	156, 1626, 1760, 1877

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.