Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0005328

Physical Location & Seq

Genomic Coordinates Forward (+)

18736422 .. 18739575

Gene Structure 3154 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g15480.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1626 bp

ATGAGTTCCTCGCAAACCCTCAGATCCAGGACACCCAGAAGCCGGGAGAAGAAAGCCCTAAACCCAGATCCCCCAGAAGTCTCAGGCAGCGAGGCACTGAGCACCCAGACCCCTCAGAAGCCCGAAACTCTCACCCGCCGTTCTCGAAACGCCAACTTTGCGCTCTCCATAGGAGACATCAGAAGGGCGGCCGCCAAAAGCGTCGGCGAGTCGACGCAGAAGCAACGGACGGACCAGATCGATCCTTGGGGGGAGGAAACCCCGAAGAAGACTCGTGTCAGCCGCCAGGAGAAGCTACCCGAAAAATTTGAGATCTTGGGTGAGTTTTTCAATGGCTTGGACACTTCGATTCGGTTGTTGCGGTTGAGGGGATTAAAGCCCAGTTTCAGCAACATTTGTCCCCAAATCGAGTGTTTAACGGATAGGAGGTTTACACACGGTCACTTGGCTCAGCTGAAGTTTGTTTTACCTGAGGCGATTGAGATAAAGAAAGTGCTTATTAAGGATGAGAGGACCAGTTGTCTGAAGCCGGATCTTCATGTCACCATCAATGCTGATGCATTGGAGAGCGATGGCAAGTCGAAACCTGAAGGTGGTGGGAGTATGCATTTGAGGAAGGCATTTCGTAAACGGCTTGCTGATCTTTCAAAATCCCATCCTGAGGATTATAACATTCCAGAAGAAATTCTCCCCCAGCCATTTGGTCGTGCGAAGCAAGATATGCTATCAGACACGGTCAATCCTCCCTTGTCATCATCTCTTGGTGAAGTATTGACTGATGCAAAAAGCTGCCTTCAGGGTGATGAGATTTCAGAGCCAAAGCTCGATACTGCTTGTGCTTCATTGTGTGGCCAAGTGCCTGTAACTCCAACTAAAGCCATGGACGCCATTGAAAATCATGATGATTTGCCCACAAAAAGTGCTAGCATTCAATCGACTCCAGCAAAGCTTGCTTCAACTCCGGCCAGGTTGAGGGCTGAAACGCCTGCATTGCAGCCTCCAAAGCGATGTTATATGAGCCCAGATCATAATTCTACTAGCTCACCGAACAAGTTGGTTACGCGTCCTCCACGCACCAGGTCTTTGAAATTTGACACGCCTGTGAAGAATAAAAATGTTGGGGATGAATCTCCTGATAGGAGTGACGGATCAAACGATAATGACATTCACGATATTCTTCCAGCCGATCTTTTGCAATCGCTTGGAGAGAAGGAGAAAAAGGCAATAGAGGAGCGAGATCCGGCCATCTCCCAAGCAAAGAGGCGGCAACAGATGATTTCCAGCCTACCTAAGCTCTTCAACTCGATTCATTTTCTACTACAGTCTATGAATCGTTCTGTTATCACAAAAGAGGAGCTTGTGCACAAGATCATTTGGACCAATTTCGATATTGTTGACAGAACATTAATAAGATGTCGAGCCCTGAGTCAGTACGTGCACGGCTTGAAGTGGCAAAGTGAGCCAAGAGCTAGGTGGTTGAAGAAAAGAGAAATCGTGCAGGTGGAGCCTCACATATCTTCGTCGGCAAATGCTGCTTTTCGCAATGTTCCCAATCCGAAGAATCTCATCCTCAGAAAAGTGCCAACGCCACCACTTACCGACTGTTCAACCACGAAGGCGGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000075 GO:0000076 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0031570 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045786 GO:0046483 GO:0048229 GO:0048519 GO:0048523 GO:0048856 GO:0050789 GO:0050794 GO:0051276 GO:0051726 GO:0065007 GO:0070182 GO:0071704 GO:0071840 GO:0090304 GO:0097472 GO:0140096 GO:1901360 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CDT1 CDT1_C

Protein Analysis

542

Amino Acids

60.41

Weight (kDa)

9.4

Isoelectric Point (pI)

68.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005328)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31270
fragaria_vesca	FvH4_2g21720 FvH4_2g21720 FvH4_2g21720 FvH4_2g21720
malus_domestica	MD05G1158100.v1.1 MD05G1191600.v1.1 MD05G1199700.v1.1 MD10G1150900.v1.1 MD10G1178300.v1.1
prunus_persica	Prupe.8G189500_v2.0.a1 Prupe.8G217800_v2.0.a1 Prupe.8G225500_v2.0.a1 Prupe.8G225500_v2.0.a1
pyrus_communis	pycom05g15010 pycom05g18610 pycom10g12990 pycom10g13000 pycom10g15480
rosa_chinensis	RchiOBHm_Chr6g0288401
rosa_laevigata	RLG00000012407
rosa_multiflora	Rmu_sc0001038.1_g000012
rosa_roxburghii	Rroxscaffold_7G00180090
rosa_rugosa	Rorug06G0196200
rosa_samantha	Rh6AG307200 Rh6BG313200 Rh6CG321000 Rh6DG306400
rosa_wichuraiana	Rw6G026580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	669
AarI	CACCTGC	1 cut(s)	1489
Acc36I	ACCTGC	1 cut(s)	1489
AccI	GTMKAC	1 cut(s)	212
AccII	CGCG	1 cut(s)	1063
AciI	CCGC	7 cut(s)	136, 188, 192, 283, 361, 1264, 1619
AclWI	GGATC	6 cut(s)	18, 62, 236, 540, 1156, 1232
AcoI	YGGCCR	4 cut(s)	189, 850, 963, 1242
AcsI	RAATTY	3 cut(s)	305, 684, 1088
AcuI	CTGAAG	4 cut(s)	476, 545, 609, 779
AcyI	GRCGYC	1 cut(s)	885
AfaI	GTAC	1 cut(s)	1433
AfiI	CCNNNNNNNGG	4 cut(s)	42, 593, 661, 972
AflIII	ACRYGT	1 cut(s)	1061
AhdI	GACNNNNNGTC	1 cut(s)	519
AjnI	CCWGG	4 cut(s)	26, 285, 965, 1076
AleI	CACNNNNGTG	1 cut(s)	1100
AluBI	AGCT	9 cut(s)	295, 454, 789, 823, 949, 1041, 1294, 1357, 1469
AluI	AGCT	9 cut(s)	295, 454, 789, 823, 949, 1041, 1294, 1357, 1469
Alw21I	GWGCWC	3 cut(s)	104, 1365, 1440
Alw26I	GTCTC	2 cut(s)	85, 168
Alw44I	GTGCAC	2 cut(s)	1361, 1436
AlwI	GGATC	6 cut(s)	18, 62, 236, 540, 1156, 1232
AoxI	GGCC	5 cut(s)	189, 850, 963, 1242, 1620
ApaLI	GTGCAC	2 cut(s)	1361, 1436
ApeKI	GCWGC	4 cut(s)	87, 789, 994, 1532
ApoI	RAATTY	3 cut(s)	305, 684, 1088
AseI	ATTAAT	1 cut(s)	1406
Asp700I	GAANNNNTTC	1 cut(s)	684
AspLEI	GCGC	1 cut(s)	163
AspS9I	GGNCC	3 cut(s)	232, 513, 1377
AsuC2I	CCSGG	1 cut(s)	44
AsuHPI	GGTGA	6 cut(s)	124, 332, 535, 776, 812, 1035
AsuNHI	GCTAGC	1 cut(s)	923
AvaII	GGWCC	3 cut(s)	232, 513, 1377
AxyI	CCTNAGG	2 cut(s)	471, 660
BaeGI	GKGCMC	2 cut(s)	1365, 1440
BalI	TGGCCA	1 cut(s)	852
BanII	GRGCYC	2 cut(s)	1022, 1423
BauI	CACGAG	1 cut(s)	273
BbsI	GAAGAC	1 cut(s)	275
Bbv12I	GWGCWC	3 cut(s)	104, 1365, 1440
BbvI	GCAGC	4 cut(s)	99, 776, 1006, 1519
BccI	CCATC	4 cut(s)	554, 566, 663, 1253
BceAI	ACGGC	3 cut(s)	123, 647, 1456
BciT130I	CCWGG	4 cut(s)	28, 287, 967, 1078
BcnI	CCSGG	1 cut(s)	44
BcoDI	GTCTC	2 cut(s)	85, 168
BfaI	CTAG	4 cut(s)	924, 1038, 1470, 1624
BfmI	CTRYAG	1 cut(s)	1319
BfuAI	ACCTGC	1 cut(s)	1489
BglII	AGATCT	1 cut(s)	312
BisI	GCNGC	9 cut(s)	88, 189, 192, 283, 790, 995, 1265, 1533, 1620
BlpI	GCTNAGC	1 cut(s)	450
BlsI	GCNGC	9 cut(s)	89, 190, 193, 284, 791, 996, 1266, 1534, 1621
Bme1390I	CCNGG	5 cut(s)	28, 44, 287, 967, 1078
Bme18I	GGWCC	3 cut(s)	232, 513, 1377
BmeRI	GACNNNNNGTC	1 cut(s)	519
BmgT120I	GGNCC	3 cut(s)	232, 513, 1377
BmiI	GGNNCC	1 cut(s)	1506
BmrFI	CCNGG	5 cut(s)	28, 44, 287, 967, 1078
BmrI	ACTGGG	1 cut(s)	375
BmsI	GCATC	2 cut(s)	547, 769
BmtI	GCTAGC	1 cut(s)	927
BmuI	ACTGGG	1 cut(s)	375
BoxI	GACNNNNGTC	1 cut(s)	275
BpiI	GAAGAC	1 cut(s)	275
BpmI	CTGGAG	1 cut(s)	924
Bpu10I	CCTNAGC	1 cut(s)	1290
Bpu1102I	GCTNAGC	1 cut(s)	450
BpuMI	CCSGG	1 cut(s)	44
Bsa29I	ATCGAT	1 cut(s)	240
BsaAI	YACGTR	1 cut(s)	1435
BsaHI	GRCGYC	1 cut(s)	885
BsaJI	CCNNGG	2 cut(s)	245, 879
BsaXI	ACNNNNNCTCC	2 cut(s)	1051, 1081
Bsc4I	CCNNNNNNNGG	4 cut(s)	42, 593, 661, 972
Bse1I	ACTGG	2 cut(s)	381, 516
Bse21I	CCTNAGG	2 cut(s)	471, 660
Bse3DI	GCAATG	2 cut(s)	989, 1549
BseBI	CCWGG	4 cut(s)	28, 287, 967, 1078
BseCI	ATCGAT	1 cut(s)	240
BseDI	CCNNGG	2 cut(s)	245, 879
BseGI	GGATG	4 cut(s)	511, 655, 1129, 1566
BseLI	CCNNNNNNNGG	4 cut(s)	42, 593, 661, 972
BseMI	GCAATG	2 cut(s)	989, 1549
BseMII	CTCAG	9 cut(s)	34, 89, 96, 128, 462, 464, 651, 1415, 1585
BseNI	ACTGG	2 cut(s)	381, 516
BseRI	GAGGAG	2 cut(s)	1244, 1367
BseSI	GKGCMC	2 cut(s)	1365, 1440
BseX3I	CGGCCG	1 cut(s)	189
BseXI	GCAGC	4 cut(s)	99, 776, 1006, 1519
BseYI	CCCAGC	1 cut(s)	693
BsgI	GTGCAG	1 cut(s)	1517
Bsh1236I	CGCG	1 cut(s)	1063
Bsh1285I	CGRYCG	1 cut(s)	192
BshFI	GGCC	5 cut(s)	191, 852, 965, 1244, 1622
BshVI	ATCGAT	1 cut(s)	240
BsiEI	CGRYCG	1 cut(s)	192
BsiHKAI	GWGCWC	3 cut(s)	104, 1365, 1440
BsiSI	CCGG	4 cut(s)	43, 530, 962, 1241
BslFI	GGGAC	1 cut(s)	384
BslI	CCNNNNNNNGG	4 cut(s)	42, 593, 661, 972
BsmAI	GTCTC	2 cut(s)	85, 168
BsmFI	GGGAC	1 cut(s)	384
BsmI	GAATGC	1 cut(s)	927
BsnI	GGCC	5 cut(s)	191, 852, 965, 1244, 1622
Bsp1286I	GDGCHC	5 cut(s)	104, 1022, 1365, 1423, 1440
Bsp1720I	GCTNAGC	1 cut(s)	450
Bsp19I	CCATGG	1 cut(s)	879
BspACI	CCGC	7 cut(s)	136, 188, 192, 283, 361, 1264, 1619
BspANI	GGCC	5 cut(s)	191, 852, 965, 1244, 1622
BspCNI	CTCAG	9 cut(s)	33, 90, 95, 127, 463, 463, 652, 1416, 1584
BspDI	ATCGAT	1 cut(s)	240
BspFNI	CGCG	1 cut(s)	1063
BspHI	TCATGA	1 cut(s)	898
BspLI	GGNNCC	1 cut(s)	1506
BspMI	ACCTGC	1 cut(s)	1489
BspOI	GCTAGC	1 cut(s)	927
BspPI	GGATC	6 cut(s)	18, 62, 236, 540, 1156, 1232
BspQI	GCTCTTC	1 cut(s)	1301
BsrDI	GCAATG	2 cut(s)	989, 1549
BsrI	ACTGG	2 cut(s)	381, 516
BssECI	CCNNGG	2 cut(s)	245, 879
BssNI	GRCGYC	1 cut(s)	885
BssSI	CACGAG	1 cut(s)	273
BssT1I	CCWWGG	2 cut(s)	245, 879
Bst2BI	CACGAG	1 cut(s)	273
Bst2UI	CCWGG	4 cut(s)	28, 287, 967, 1078
Bst4CI	ACNGT	4 cut(s)	440, 736, 1323, 1604
Bst6I	CTCTTC	1 cut(s)	1301
BstACI	GRCGYC	1 cut(s)	885
BstAPI	GCANNNNNTGC	3 cut(s)	721, 950, 1532
BstBAI	YACGTR	1 cut(s)	1435
BstC8I	GCNNGC	4 cut(s)	636, 925, 951, 987
BstDSI	CCRYGG	1 cut(s)	879
BstF5I	GGATG	4 cut(s)	511, 655, 1129, 1566
BstFNI	CGCG	1 cut(s)	1063
BstHHI	GCGC	1 cut(s)	163
BstMAI	GTCTC	2 cut(s)	85, 168
BstMCI	CGRYCG	1 cut(s)	192
BstMWI	GCNNNNNNNGC	9 cut(s)	158, 721, 884, 950, 991, 1003, 1459, 1504, 1532
BstNI	CCWGG	4 cut(s)	28, 287, 967, 1078
BstPAI	GACNNNNGTC	1 cut(s)	275
BstSCI	CCNGG	5 cut(s)	26, 42, 285, 965, 1076
BstSFI	CTRYAG	1 cut(s)	1319
BstSLI	GKGCMC	2 cut(s)	1365, 1440
BstUI	CGCG	1 cut(s)	1063
BstV1I	GCAGC	4 cut(s)	99, 776, 1006, 1519
BstV2I	GAAGAC	1 cut(s)	275
BstX2I	RGATCY	5 cut(s)	23, 67, 312, 532, 1237
BstXI	CCANNNNNNTGG	1 cut(s)	701
BstYI	RGATCY	5 cut(s)	23, 67, 312, 532, 1237
BstZI	CGGCCG	1 cut(s)	189
Bsu15I	ATCGAT	1 cut(s)	240
Bsu36I	CCTNAGG	2 cut(s)	471, 660
BsuRI	GGCC	5 cut(s)	191, 852, 965, 1244, 1622
BsuTUI	ATCGAT	1 cut(s)	240
BtgI	CCRYGG	1 cut(s)	879
BtgZI	GCGATG	2 cut(s)	585, 1021
BtsCI	GGATG	4 cut(s)	511, 655, 1129, 1566
BtsIMutI	CAGTG	1 cut(s)	95
BveI	ACCTGC	1 cut(s)	1489
Cac8I	GCNNGC	4 cut(s)	636, 925, 951, 987
CciI	TCATGA	1 cut(s)	898
CciNI	GCGGCCGC	1 cut(s)	189
CfoI	GCGC	1 cut(s)	163
Cfr13I	GGNCC	3 cut(s)	232, 513, 1377
ClaI	ATCGAT	1 cut(s)	240
CseI	GACGC	4 cut(s)	190, 223, 893, 1052
CsiI	ACCWGGT	1 cut(s)	1076
Csp6I	GTAC	1 cut(s)	1432
CviAII	CATG	3 cut(s)	539, 880, 899
CviQI	GTAC	1 cut(s)	1432
DriI	GACNNNNNGTC	1 cut(s)	519
EaeI	YGGCCR	4 cut(s)	189, 850, 963, 1242
EagI	CGGCCG	1 cut(s)	189
Eam1104I	CTCTTC	1 cut(s)	1301
Eam1105I	GACNNNNNGTC	1 cut(s)	519
EarI	CTCTTC	1 cut(s)	1301
EclXI	CGGCCG	1 cut(s)	189
Eco130I	CCWWGG	2 cut(s)	245, 879
Eco24I	GRGCYC	2 cut(s)	1022, 1423
Eco47I	GGWCC	3 cut(s)	232, 513, 1377
Eco52I	CGGCCG	1 cut(s)	189
Eco57I	CTGAAG	4 cut(s)	476, 545, 609, 779
Eco81I	CCTNAGG	2 cut(s)	471, 660
EcoRII	CCWGG	4 cut(s)	26, 285, 965, 1076
EcoT14I	CCWWGG	2 cut(s)	245, 879
EcoT22I	ATGCAT	2 cut(s)	562, 609
EcoT38I	GRGCYC	2 cut(s)	1022, 1423
ErhI	CCWWGG	2 cut(s)	245, 879
FaeI	CATG	3 cut(s)	542, 883, 902
FalI	AAGNNNNNCTT	2 cut(s)	1341, 1373
FaqI	GGGAC	1 cut(s)	384
FatI	CATG	3 cut(s)	538, 879, 898
FauI	CCCGC	1 cut(s)	143
FblI	GTMKAC	1 cut(s)	212
Fnu4HI	GCNGC	9 cut(s)	88, 189, 192, 283, 790, 995, 1265, 1533, 1620
FokI	GGATG	4 cut(s)	518, 642, 1136, 1553
FriOI	GRGCYC	2 cut(s)	1022, 1423
Fsp4HI	GCNGC	9 cut(s)	88, 189, 192, 283, 790, 995, 1265, 1533, 1620
FspBI	CTAG	4 cut(s)	924, 1038, 1470, 1624
GlaI	GCGC	1 cut(s)	162
GluI	GCNGC	9 cut(s)	88, 189, 192, 283, 790, 995, 1265, 1533, 1620
GsaI	CCCAGC	1 cut(s)	697
GsuI	CTGGAG	1 cut(s)	924
HaeIII	GGCC	5 cut(s)	191, 852, 965, 1244, 1622
HapII	CCGG	4 cut(s)	43, 530, 962, 1241
HgaI	GACGC	4 cut(s)	190, 223, 893, 1052
HhaI	GCGC	1 cut(s)	163
Hin1I	GRCGYC	1 cut(s)	885
Hin1II	CATG	3 cut(s)	542, 883, 902
Hin6I	GCGC	1 cut(s)	161
HinP1I	GCGC	1 cut(s)	161
HincII	GTYRAC	2 cut(s)	213, 1396
HindII	GTYRAC	2 cut(s)	213, 1396
HindIII	AAGCTT	1 cut(s)	947
HinfI	GANTC	9 cut(s)	209, 271, 349, 937, 1127, 1306, 1330, 1426, 1561
HpaII	CCGG	4 cut(s)	43, 530, 962, 1241
HphI	GGTGA	6 cut(s)	124, 332, 535, 776, 812, 1035
Hpy166II	GTNNAC	6 cut(s)	213, 432, 629, 1363, 1396, 1438
Hpy188I	TCNGA	8 cut(s)	23, 117, 182, 525, 730, 814, 1557, 1574
Hpy188III	TCNNGA	6 cut(s)	144, 659, 677, 899, 1133, 1169
Hpy8I	GTNNAC	6 cut(s)	213, 432, 629, 1363, 1396, 1438
Hpy99I	CGWCG	3 cut(s)	206, 217, 1525
HpyAV	CCTTC	6 cut(s)	177, 584, 610, 803, 1204, 1609
HpyCH4III	ACNGT	4 cut(s)	440, 736, 1323, 1604
HpyCH4IV	ACGT	1 cut(s)	1434
HpyCH4V	TGCA	9 cut(s)	560, 607, 782, 989, 994, 1195, 1363, 1438, 1498
HpyF10VI	GCNNNNNNNGC	9 cut(s)	158, 721, 884, 950, 991, 1003, 1459, 1504, 1532
HpySE526I	ACGT	1 cut(s)	1434
Hsp92I	GRCGYC	1 cut(s)	885
Hsp92II	CATG	3 cut(s)	542, 883, 902
HspAI	GCGC	1 cut(s)	161
LguI	GCTCTTC	1 cut(s)	1301
LmnI	GCTCC	3 cut(s)	1231, 1354, 1504
Lsp1109I	GCAGC	4 cut(s)	99, 776, 1006, 1519
LweI	GCATC	2 cut(s)	547, 769
MabI	ACCWGGT	1 cut(s)	1076
MaeI	CTAG	4 cut(s)	924, 1038, 1470, 1624
MaeII	ACGT	1 cut(s)	1434
MaeIII	GTNAC	5 cut(s)	440, 541, 862, 1057, 1142
MflI	RGATCY	5 cut(s)	23, 67, 312, 532, 1237
MhlI	GDGCHC	5 cut(s)	104, 1022, 1365, 1423, 1440
MlsI	TGGCCA	1 cut(s)	852
MluCI	AATT	5 cut(s)	305, 684, 1030, 1088, 1381
MluI	ACGCGT	1 cut(s)	1061
MluNI	TGGCCA	1 cut(s)	852
MlyI	GAGTC	4 cut(s)	218, 265, 931, 1435
MmeI	TCCRAC	1 cut(s)	893
Mox20I	TGGCCA	1 cut(s)	852
Mph1103I	ATGCAT	2 cut(s)	562, 609
MroXI	GAANNNNTTC	1 cut(s)	684
MscI	TGGCCA	1 cut(s)	852
MseI	TTAA	4 cut(s)	374, 416, 501, 1406
MslI	CAYNNNNRTG	1 cut(s)	1100
Msp20I	TGGCCA	1 cut(s)	852
MspA1I	CMGCKG	1 cut(s)	454
MspI	CCGG	4 cut(s)	43, 530, 962, 1241
MspR9I	CCNGG	5 cut(s)	28, 44, 287, 967, 1078
Mva1269I	GAATGC	1 cut(s)	927
MvaI	CCWGG	4 cut(s)	28, 287, 967, 1078
MvnI	CGCG	1 cut(s)	1063
MwoI	GCNNNNNNNGC	9 cut(s)	158, 721, 884, 950, 991, 1003, 1459, 1504, 1532
NciI	CCSGG	1 cut(s)	44
NcoI	CCATGG	1 cut(s)	879
NheI	GCTAGC	1 cut(s)	923
NlaIII	CATG	3 cut(s)	542, 883, 902
NlaIV	GGNNCC	1 cut(s)	1506
NmuCI	GTSAC	3 cut(s)	440, 541, 1142
NotI	GCGGCCGC	1 cut(s)	189
NsiI	ATGCAT	2 cut(s)	562, 609
OliI	CACNNNNGTG	1 cut(s)	1100
PagI	TCATGA	1 cut(s)	898
PaqCI	CACCTGC	1 cut(s)	1489
PciSI	GCTCTTC	1 cut(s)	1301
PcsI	WCGNNNNNNNCGW	1 cut(s)	1152
PctI	GAATGC	1 cut(s)	927
PdmI	GAANNNNTTC	1 cut(s)	684
PfeI	GAWTC	5 cut(s)	349, 1127, 1306, 1330, 1561
PflFI	GACNNNGTC	1 cut(s)	734
PfoI	TCCNGGA	1 cut(s)	26
PkrI	GCNGC	9 cut(s)	89, 190, 193, 284, 791, 996, 1266, 1534, 1621
PleI	GAGTC	4 cut(s)	217, 265, 931, 1434
PpsI	GAGTC	4 cut(s)	217, 265, 931, 1434
Ppu21I	YACGTR	1 cut(s)	1435
PshAI	GACNNNNGTC	1 cut(s)	275
PshBI	ATTAAT	1 cut(s)	1406
PsiI	TTATAA	1 cut(s)	669
Psp6I	CCWGG	4 cut(s)	26, 285, 965, 1076
PspFI	CCCAGC	1 cut(s)	693
PspGI	CCWGG	4 cut(s)	26, 285, 965, 1076
PspN4I	GGNNCC	1 cut(s)	1506
PspPI	GGNCC	3 cut(s)	232, 513, 1377
PsuI	RGATCY	5 cut(s)	23, 67, 312, 532, 1237
PsyI	GACNNNGTC	1 cut(s)	734
PvuII	CAGCTG	1 cut(s)	454
RsaI	GTAC	1 cut(s)	1433
RsaNI	GTAC	1 cut(s)	1432
RseI	CAYNNNNRTG	1 cut(s)	1100
SalI	GTCGAC	1 cut(s)	211
SapI	GCTCTTC	1 cut(s)	1301
SaqAI	TTAA	4 cut(s)	374, 416, 501, 1406
SatI	GCNGC	9 cut(s)	88, 189, 192, 283, 790, 995, 1265, 1533, 1620
Sau96I	GGNCC	3 cut(s)	232, 513, 1377
SchI	GAGTC	4 cut(s)	218, 265, 931, 1435
ScrFI	CCNGG	5 cut(s)	28, 44, 287, 967, 1078
SduI	GDGCHC	5 cut(s)	104, 1022, 1365, 1423, 1440
SexAI	ACCWGGT	1 cut(s)	1076
SfaNI	GCATC	2 cut(s)	547, 769
SfcI	CTRYAG	1 cut(s)	1319
SinI	GGWCC	3 cut(s)	232, 513, 1377
SmiMI	CAYNNNNRTG	1 cut(s)	1100
Sse9I	AATT	5 cut(s)	305, 684, 1030, 1088, 1381
SsiI	CCGC	7 cut(s)	136, 188, 192, 283, 361, 1264, 1619
SspMI	CTAG	4 cut(s)	924, 1038, 1470, 1624
StyD4I	CCNGG	5 cut(s)	26, 42, 285, 965, 1076
StyI	CCWWGG	2 cut(s)	245, 879
TaaI	ACNGT	4 cut(s)	440, 736, 1323, 1604
TaiI	ACGT	1 cut(s)	1437
TasI	AATT	5 cut(s)	305, 684, 1030, 1088, 1381
TauI	GCSGC	5 cut(s)	191, 194, 285, 1267, 1622
TfiI	GAWTC	5 cut(s)	349, 1127, 1306, 1330, 1561
Tru1I	TTAA	4 cut(s)	374, 416, 501, 1406
Tru9I	TTAA	4 cut(s)	374, 416, 501, 1406
TscAI	CASTG	1 cut(s)	102
TseFI	GTSAC	3 cut(s)	440, 541, 1142
TseI	GCWGC	4 cut(s)	87, 789, 994, 1532
Tsp45I	GTSAC	3 cut(s)	440, 541, 1142
TspDTI	ATGAA	5 cut(s)	527, 831, 1140, 1298, 1343
TspGWI	ACGGA	4 cut(s)	241, 245, 434, 1161
TspRI	CASTG	1 cut(s)	102
Tth111I	GACNNNGTC	1 cut(s)	734
VneI	GTGCAC	2 cut(s)	1361, 1436
VpaK11BI	GGWCC	3 cut(s)	232, 513, 1377
VspI	ATTAAT	1 cut(s)	1406
XapI	RAATTY	3 cut(s)	305, 684, 1088
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1470
XmiI	GTMKAC	1 cut(s)	212
XmnI	GAANNNNTTC	1 cut(s)	684
XspI	CTAG	4 cut(s)	924, 1038, 1470, 1624
Zsp2I	ATGCAT	2 cut(s)	562, 609

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.