Classical arabinogalactan protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G47930 |
| fragaria_vesca | FvH4_2g24771 FvH4_4g17060 |
| malus_domestica | MD11G1298300.v1.1 MD16G1176200.v1.1 |
| prunus_persica | Prupe.1G143000_v2.0.a1 Prupe.8G252700_v2.0.a1 |
| pyrus_communis | pycom03g22010 pycom11g26190 pycom16g14760 |
| rosa_chinensis | RchiOBHm_Chr4g0420861 RchiOBHm_Chr6g0292601 |
| rosa_laevigata | RLG00000007732 |
| rosa_multiflora | Rmu_sc0002006.1_g000016 |
| rosa_roxburghii | Rroxscaffold_5G00363270 |
| rosa_rugosa | Rorug04G0166500.1 |
| rosa_samantha | Rh4BG231000 Rh4CG243000 Rh4DG226300 Rh6AG341400 Rh6BG348800 Rh6CG355700 Rh6DG341800 |
| rosa_wichuraiana | Rw4G019730 Rw6G029750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 106 |
| Acc36I | ACCTGC | 2 cut(s) | 106, 391 |
| AcuI | CTGAAG | 1 cut(s) | 273 |
| AfaI | GTAC | 1 cut(s) | 115 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 284, 359 |
| AjnI | CCWGG | 1 cut(s) | 109 |
| AluBI | AGCT | 3 cut(s) | 68, 122, 257 |
| AluI | AGCT | 3 cut(s) | 68, 122, 257 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 98, 332 |
| ApeKI | GCWGC | 2 cut(s) | 92, 266 |
| AsuHPI | GGTGA | 2 cut(s) | 168, 285 |
| BanII | GRGCYC | 1 cut(s) | 307 |
| BbvI | GCAGC | 2 cut(s) | 104, 253 |
| BccI | CCATC | 2 cut(s) | 235, 304 |
| BciT130I | CCWGG | 1 cut(s) | 111 |
| BfmI | CTRYAG | 2 cut(s) | 90, 99 |
| BfuAI | ACCTGC | 2 cut(s) | 106, 391 |
| BisI | GCNGC | 2 cut(s) | 93, 267 |
| BlsI | GCNGC | 2 cut(s) | 94, 268 |
| Bme1390I | CCNGG | 1 cut(s) | 111 |
| BmiI | GGNNCC | 1 cut(s) | 306 |
| BmrFI | CCNGG | 1 cut(s) | 111 |
| BmrI | ACTGGG | 1 cut(s) | 231 |
| BmuI | ACTGGG | 1 cut(s) | 231 |
| BpmI | CTGGAG | 1 cut(s) | 102 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 106, 136 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 284, 359 |
| Bse1I | ACTGG | 1 cut(s) | 237 |
| Bse3DI | GCAATG | 1 cut(s) | 33 |
| BseBI | CCWGG | 1 cut(s) | 111 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 284, 359 |
| BseMI | GCAATG | 1 cut(s) | 33 |
| BseNI | ACTGG | 1 cut(s) | 237 |
| BseXI | GCAGC | 2 cut(s) | 104, 253 |
| BsiSI | CCGG | 1 cut(s) | 140 |
| BslFI | GGGAC | 1 cut(s) | 225 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 284, 359 |
| BsmFI | GGGAC | 1 cut(s) | 225 |
| Bsp1286I | GDGCHC | 1 cut(s) | 307 |
| BspHI | TCATGA | 1 cut(s) | 33 |
| BspLI | GGNNCC | 1 cut(s) | 306 |
| BspMAI | CTGCAG | 2 cut(s) | 94, 103 |
| BspMI | ACCTGC | 2 cut(s) | 106, 391 |
| BsrDI | GCAATG | 1 cut(s) | 33 |
| BsrI | ACTGG | 1 cut(s) | 237 |
| Bst2UI | CCWGG | 1 cut(s) | 111 |
| Bst4CI | ACNGT | 1 cut(s) | 262 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 98 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 98, 263 |
| BstNI | CCWGG | 1 cut(s) | 111 |
| BstSCI | CCNGG | 1 cut(s) | 109 |
| BstSFI | CTRYAG | 2 cut(s) | 90, 99 |
| BstV1I | GCAGC | 2 cut(s) | 104, 253 |
| BtsI | GCAGTG | 1 cut(s) | 212 |
| BtsIMutI | CAGTG | 1 cut(s) | 212 |
| BveI | ACCTGC | 2 cut(s) | 106, 391 |
| CaiI | CAGNNNCTG | 2 cut(s) | 98, 332 |
| CciI | TCATGA | 1 cut(s) | 33 |
| CsiI | ACCWGGT | 1 cut(s) | 109 |
| Csp6I | GTAC | 1 cut(s) | 114 |
| CviAII | CATG | 4 cut(s) | 22, 34, 43, 359 |
| CviJI | RGCY | 8 cut(s) | 5, 47, 68, 122, 143, 234, 257, 305 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 47, 68, 122, 143, 234, 257, 305 |
| CviQI | GTAC | 1 cut(s) | 114 |
| Eco24I | GRGCYC | 1 cut(s) | 307 |
| Eco57I | CTGAAG | 1 cut(s) | 273 |
| EcoRII | CCWGG | 1 cut(s) | 109 |
| EcoT38I | GRGCYC | 1 cut(s) | 307 |
| FaeI | CATG | 4 cut(s) | 25, 37, 46, 362 |
| FaiI | YATR | 6 cut(s) | 23, 35, 44, 311, 360, 395 |
| FaqI | GGGAC | 1 cut(s) | 225 |
| FatI | CATG | 4 cut(s) | 21, 33, 42, 358 |
| Fnu4HI | GCNGC | 2 cut(s) | 93, 267 |
| FriOI | GRGCYC | 1 cut(s) | 307 |
| Fsp4HI | GCNGC | 2 cut(s) | 93, 267 |
| GluI | GCNGC | 2 cut(s) | 93, 267 |
| GsuI | CTGGAG | 1 cut(s) | 102 |
| HapII | CCGG | 1 cut(s) | 140 |
| Hin1II | CATG | 4 cut(s) | 25, 37, 46, 362 |
| HinfI | GANTC | 1 cut(s) | 206 |
| HpaII | CCGG | 1 cut(s) | 140 |
| HphI | GGTGA | 2 cut(s) | 168, 285 |
| Hpy188III | TCNNGA | 2 cut(s) | 34, 272 |
| HpyAV | CCTTC | 2 cut(s) | 28, 189 |
| HpyCH4III | ACNGT | 1 cut(s) | 262 |
| HpyCH4V | TGCA | 3 cut(s) | 92, 101, 400 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 98, 263 |
| Hsp92II | CATG | 4 cut(s) | 25, 37, 46, 362 |
| LmnI | GCTCC | 3 cut(s) | 127, 274, 310 |
| Lsp1109I | GCAGC | 2 cut(s) | 104, 253 |
| MabI | ACCWGGT | 1 cut(s) | 109 |
| MaeIII | GTNAC | 1 cut(s) | 334 |
| MboII | GAAGA | 4 cut(s) | 45, 48, 51, 123 |
| MhlI | GDGCHC | 1 cut(s) | 307 |
| MluCI | AATT | 1 cut(s) | 281 |
| MlyI | GAGTC | 1 cut(s) | 215 |
| MnlI | CCTC | 3 cut(s) | 91, 184, 363 |
| MseI | TTAA | 1 cut(s) | 344 |
| MslI | CAYNNNNRTG | 1 cut(s) | 26 |
| MspI | CCGG | 1 cut(s) | 140 |
| MspR9I | CCNGG | 1 cut(s) | 111 |
| MvaI | CCWGG | 1 cut(s) | 111 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 98, 263 |
| NlaIII | CATG | 4 cut(s) | 25, 37, 46, 362 |
| NlaIV | GGNNCC | 1 cut(s) | 306 |
| PagI | TCATGA | 1 cut(s) | 33 |
| PaqCI | CACCTGC | 1 cut(s) | 106 |
| PkrI | GCNGC | 2 cut(s) | 94, 268 |
| PleI | GAGTC | 1 cut(s) | 214 |
| PpsI | GAGTC | 1 cut(s) | 214 |
| Psp6I | CCWGG | 1 cut(s) | 109 |
| PspGI | CCWGG | 1 cut(s) | 109 |
| PspN4I | GGNNCC | 1 cut(s) | 306 |
| PstI | CTGCAG | 2 cut(s) | 94, 103 |
| PstNI | CAGNNNCTG | 2 cut(s) | 98, 332 |
| RsaI | GTAC | 1 cut(s) | 115 |
| RsaNI | GTAC | 1 cut(s) | 114 |
| RseI | CAYNNNNRTG | 1 cut(s) | 26 |
| SaqAI | TTAA | 1 cut(s) | 344 |
| SatI | GCNGC | 2 cut(s) | 93, 267 |
| SchI | GAGTC | 1 cut(s) | 215 |
| ScrFI | CCNGG | 1 cut(s) | 111 |
| SduI | GDGCHC | 1 cut(s) | 307 |
| SetI | ASST | 7 cut(s) | 70, 100, 115, 124, 181, 259, 405 |
| SexAI | ACCWGGT | 1 cut(s) | 109 |
| SfcI | CTRYAG | 2 cut(s) | 90, 99 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 26 |
| Sse9I | AATT | 1 cut(s) | 281 |
| StyD4I | CCNGG | 1 cut(s) | 109 |
| TaaI | ACNGT | 1 cut(s) | 262 |
| TasI | AATT | 1 cut(s) | 281 |
| Tru1I | TTAA | 1 cut(s) | 344 |
| Tru9I | TTAA | 1 cut(s) | 344 |
| TscAI | CASTG | 1 cut(s) | 219 |
| TseI | GCWGC | 2 cut(s) | 92, 266 |
| TspDTI | ATGAA | 7 cut(s) | 10, 22, 31, 51, 123, 330, 358 |
| TspRI | CASTG | 1 cut(s) | 219 |