Classical arabinogalactan protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G47930 |
| fragaria_vesca | FvH4_2g24771 FvH4_4g17060 |
| malus_domestica | MD11G1298300.v1.1 MD16G1176200.v1.1 |
| prunus_persica | Prupe.1G143000_v2.0.a1 Prupe.8G252700_v2.0.a1 |
| pyrus_communis | pycom03g22010 pycom11g26190 pycom16g14760 |
| rosa_chinensis | RchiOBHm_Chr4g0420861 RchiOBHm_Chr6g0292601 |
| rosa_laevigata | RLG00000007732 |
| rosa_multiflora | Rmu_sc0002006.1_g000016 |
| rosa_roxburghii | Rroxscaffold_5G00363270 |
| rosa_rugosa | Rorug04G0166500.1 |
| rosa_samantha | Rh4BG231000 Rh4CG243000 Rh4DG226300 Rh6AG341400 Rh6BG348800 Rh6CG355700 Rh6DG341800 |
| rosa_wichuraiana | Rw4G019730 Rw6G029750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 109 |
| Acc36I | ACCTGC | 2 cut(s) | 109, 391 |
| AcsI | RAATTY | 1 cut(s) | 363 |
| AcuI | CTGAAG | 1 cut(s) | 276 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 287, 359 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 304, 336 |
| AluBI | AGCT | 3 cut(s) | 71, 107, 260 |
| AluI | AGCT | 3 cut(s) | 71, 107, 260 |
| Alw26I | GTCTC | 1 cut(s) | 312 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 101, 335 |
| ApeKI | GCWGC | 3 cut(s) | 95, 104, 269 |
| ApoI | RAATTY | 1 cut(s) | 363 |
| AspS9I | GGNCC | 1 cut(s) | 15 |
| AsuHPI | GGTGA | 2 cut(s) | 171, 288 |
| AvaII | GGWCC | 1 cut(s) | 15 |
| BbvI | GCAGC | 3 cut(s) | 107, 116, 256 |
| BccI | CCATC | 2 cut(s) | 238, 307 |
| BcoDI | GTCTC | 1 cut(s) | 312 |
| BfaI | CTAG | 1 cut(s) | 68 |
| BfmI | CTRYAG | 2 cut(s) | 93, 102 |
| BfuAI | ACCTGC | 2 cut(s) | 109, 391 |
| BisI | GCNGC | 3 cut(s) | 96, 105, 270 |
| BlsI | GCNGC | 3 cut(s) | 97, 106, 271 |
| Bme18I | GGWCC | 1 cut(s) | 15 |
| BmgT120I | GGNCC | 1 cut(s) | 15 |
| BmsI | GCATC | 1 cut(s) | 106 |
| BpmI | CTGGAG | 1 cut(s) | 105 |
| BsaI | GGTCTC | 1 cut(s) | 312 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 287, 359 |
| Bse1I | ACTGG | 1 cut(s) | 317 |
| Bse3DI | GCAATG | 1 cut(s) | 33 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 287, 359 |
| BseMI | GCAATG | 1 cut(s) | 33 |
| BseNI | ACTGG | 1 cut(s) | 317 |
| BseXI | GCAGC | 3 cut(s) | 107, 116, 256 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 287, 359 |
| BsmAI | GTCTC | 1 cut(s) | 312 |
| Bso31I | GGTCTC | 1 cut(s) | 312 |
| BspMAI | CTGCAG | 2 cut(s) | 97, 106 |
| BspMI | ACCTGC | 2 cut(s) | 109, 391 |
| BspTNI | GGTCTC | 1 cut(s) | 312 |
| BsrDI | GCAATG | 1 cut(s) | 33 |
| BsrI | ACTGG | 1 cut(s) | 317 |
| Bst4CI | ACNGT | 1 cut(s) | 265 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 101 |
| BstDEI | CTNAG | 1 cut(s) | 75 |
| BstMAI | GTCTC | 1 cut(s) | 312 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 101, 104, 266 |
| BstSFI | CTRYAG | 2 cut(s) | 93, 102 |
| BstV1I | GCAGC | 3 cut(s) | 107, 116, 256 |
| BtsI | GCAGTG | 1 cut(s) | 215 |
| BtsIMutI | CAGTG | 1 cut(s) | 215 |
| BveI | ACCTGC | 2 cut(s) | 109, 391 |
| CaiI | CAGNNNCTG | 2 cut(s) | 101, 335 |
| Cfr13I | GGNCC | 1 cut(s) | 15 |
| CviAII | CATG | 3 cut(s) | 22, 34, 359 |
| CviJI | RGCY | 8 cut(s) | 5, 47, 71, 107, 125, 237, 243, 260 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 47, 71, 107, 125, 237, 243, 260 |
| DdeI | CTNAG | 1 cut(s) | 75 |
| Eco31I | GGTCTC | 1 cut(s) | 312 |
| Eco47I | GGWCC | 1 cut(s) | 15 |
| Eco57I | CTGAAG | 1 cut(s) | 276 |
| FaeI | CATG | 3 cut(s) | 25, 37, 362 |
| FaiI | YATR | 4 cut(s) | 23, 35, 360, 393 |
| FatI | CATG | 3 cut(s) | 21, 33, 358 |
| Fnu4HI | GCNGC | 3 cut(s) | 96, 105, 270 |
| Fsp4HI | GCNGC | 3 cut(s) | 96, 105, 270 |
| FspBI | CTAG | 1 cut(s) | 68 |
| GluI | GCNGC | 3 cut(s) | 96, 105, 270 |
| GsuI | CTGGAG | 1 cut(s) | 105 |
| Hin1II | CATG | 3 cut(s) | 25, 37, 362 |
| HinfI | GANTC | 1 cut(s) | 209 |
| HphI | GGTGA | 2 cut(s) | 171, 288 |
| Hpy188III | TCNNGA | 1 cut(s) | 275 |
| HpyAV | CCTTC | 3 cut(s) | 28, 186, 192 |
| HpyCH4III | ACNGT | 1 cut(s) | 265 |
| HpyCH4V | TGCA | 3 cut(s) | 95, 104, 400 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 101, 104, 266 |
| HpyF3I | CTNAG | 1 cut(s) | 75 |
| Hsp92II | CATG | 3 cut(s) | 25, 37, 362 |
| LmnI | GCTCC | 2 cut(s) | 124, 277 |
| Lsp1109I | GCAGC | 3 cut(s) | 107, 116, 256 |
| LweI | GCATC | 1 cut(s) | 106 |
| MaeI | CTAG | 1 cut(s) | 68 |
| MaeIII | GTNAC | 1 cut(s) | 337 |
| MboII | GAAGA | 5 cut(s) | 45, 48, 51, 54, 126 |
| MluCI | AATT | 4 cut(s) | 195, 225, 284, 363 |
| MlyI | GAGTC | 1 cut(s) | 218 |
| MmeI | TCCRAC | 1 cut(s) | 167 |
| MnlI | CCTC | 3 cut(s) | 94, 148, 363 |
| MseI | TTAA | 1 cut(s) | 41 |
| MslI | CAYNNNNRTG | 1 cut(s) | 26 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 101, 104, 266 |
| NlaIII | CATG | 3 cut(s) | 25, 37, 362 |
| PaqCI | CACCTGC | 1 cut(s) | 109 |
| PkrI | GCNGC | 3 cut(s) | 97, 106, 271 |
| PleI | GAGTC | 1 cut(s) | 217 |
| PpsI | GAGTC | 1 cut(s) | 217 |
| PspPI | GGNCC | 1 cut(s) | 15 |
| PstI | CTGCAG | 2 cut(s) | 97, 106 |
| PstNI | CAGNNNCTG | 2 cut(s) | 101, 335 |
| RseI | CAYNNNNRTG | 1 cut(s) | 26 |
| SaqAI | TTAA | 1 cut(s) | 41 |
| SatI | GCNGC | 3 cut(s) | 96, 105, 270 |
| Sau96I | GGNCC | 1 cut(s) | 15 |
| SchI | GAGTC | 1 cut(s) | 218 |
| SetI | ASST | 7 cut(s) | 73, 103, 109, 149, 184, 262, 405 |
| SfaNI | GCATC | 1 cut(s) | 106 |
| SfcI | CTRYAG | 2 cut(s) | 93, 102 |
| SinI | GGWCC | 1 cut(s) | 15 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 26 |
| Sse9I | AATT | 4 cut(s) | 195, 225, 284, 363 |
| SspMI | CTAG | 1 cut(s) | 68 |
| TaaI | ACNGT | 1 cut(s) | 265 |
| TasI | AATT | 4 cut(s) | 195, 225, 284, 363 |
| Tru1I | TTAA | 1 cut(s) | 41 |
| Tru9I | TTAA | 1 cut(s) | 41 |
| TscAI | CASTG | 1 cut(s) | 222 |
| TseI | GCWGC | 3 cut(s) | 95, 104, 269 |
| TspDTI | ATGAA | 3 cut(s) | 10, 22, 333 |
| TspRI | CASTG | 1 cut(s) | 222 |
| VpaK11BI | GGWCC | 1 cut(s) | 15 |
| XapI | RAATTY | 1 cut(s) | 363 |
| XspI | CTAG | 1 cut(s) | 68 |