FvH4_2g28240

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
22217942 .. 22222124
4183 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g28240.t1

Sequence Viewer

Length: 1377 bp
ATGAAGCTTCTTGTTGTGGTTGTTGTAAATTTTGTTGCTTTTGTGCTTGTAGACCAAAACAAGCCATGCCCTTTTTGTGTTGGAGCCACAGTTGTACCTGACCCACTTGTTTCTTCCATAACGGCTCCTCTTCCCTCACCAAACTTCTCACCCATTCCGCCAATTGCTTCATCAATGGCTTCCTTCTCTCCAGGAATTCAACAAGGAAGTGACGAGAACCAAATGGATCCACATAAGAAGATGATCATTGCCCTCACTGTGACTTGTGCAACACTTGGTGCAGTTTTGTTGTCACTATTGTGTTTGTGGTTTTATCACAGGAAGTACAAGTTCCTTAAGAGAAATGCTCAGAGCTCAGATGCTGAGAAGGAGCTGGCATTGTCTCCATTTTTCGGCAAATTCAATTCCATAAAGATGGTTGGGAAAAAAGGGTTGGTTACAGTAATTGAGTATAAGCTAATAGAAAAAGGCACTAGCAATTTTCAGGAGAGTAATATCTTGGGCGAGGGTGGATTTGGATGCGTTTACCGGGCTCATTTGGATGAAAATTTGATTGTTGCTGTCAAGAAACTGGACTGTGCAACTCAGGATGCGGAGAAAGAATTTGAGAATGAGGTGGAGTTATTACATAAAATTCAGCATCCAAATATAATTTCCTTTTTGGGCTGTAGTATCGATGGTGACTCAAGGTTCATTGTTTATGAATTGATGCCTAATGGTTCTCTGGAAACTCAATTGCATGGACCCTCTCATGGATCGGCATTAACATGGCCTATGCGAATGAAAATTGCTCTGGATACTGCAAGAGGATTAGAGTATCTGCATGAGTACTGCAACCCTCCAGTGATCCATAGAGATCTGAAAACATCTAATATTCTTTTGGATGCCAACTTCAATGCCAAGCTTTCTGATTTTGGTCTTGCTGTGGCTGATGGGGCCAGAAATAATAATAACATCAAGCTTTCTGGCACATTGGGCTATGTTGCTCCGGAGTATCTTTTAGATGGTAAGTTAACAGACAAGAGTGACGTCTATGGTTTTGGAGTTGTACTTTTGGAGCTTCTACTAGGAAGAAGGCCTGTAGAAAAACTGGCACCCACTCAATGCCAATCCATAGTCACATGGGCCATGCCTCAGCTTACTGACCGATCAAAGCTTCCACACATTGTGGATCCCGTGATCAAAGATACAATGGATCTGAAGCACTTATACCAGGTTGCTGCTGTAGCCGTGTTATGTGTGCAACCAGAACCAAGTTACCGCCCACTAATAACAGATGTTTTGCATTCTCTTGTCCCTCTTGTTCCTGTCGAGCTCGGAGGCACACTTAGAGGTTCGCGCAGCTTAGACAATCCATCGGTCCATATCACACATTGA

Protein Analysis

459

Amino Acids

50.31

Weight (kDa)

6.4

Isoelectric Point (pI)

35.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 161 - 377 1.4e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 164 - 397 1.1e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1032
AccB1I GGYRCC 1 cut(s) 1093
AccI GTMKAC 1 cut(s) 51
AccII CGCG 1 cut(s) 1339
AccIII TCCGGA 1 cut(s) 988
AciI CCGC 3 cut(s) 158, 593, 1261
AclWI GGATC 7 cut(s) 221, 234, 763, 841, 1166, 1179, 1203
AcsI RAATTY 6 cut(s) 28, 195, 398, 547, 602, 633
AcuI CTGAAG 1 cut(s) 1220
AcyI GRCGYC 1 cut(s) 1029
AdeI CACNNNGTG 2 cut(s) 278, 1168
AfaI GTAC 4 cut(s) 96, 326, 830, 1050
AfiI CCNNNNNNNGG 2 cut(s) 392, 752
AflII CTTAAG 1 cut(s) 335
AgsI TTSAA 3 cut(s) 200, 403, 895
AjnI CCWGG 2 cut(s) 190, 1212
AjuI GAANNNNNNNTTGG 4 cut(s) 416, 448, 637, 669
AleI CACNNNNGTG 1 cut(s) 298
Alw21I GWGCWC 2 cut(s) 356, 1317
Alw26I GTCTC 1 cut(s) 387
AlwI GGATC 7 cut(s) 221, 234, 763, 841, 1166, 1179, 1203
AlwNI CAGNNNCTG 1 cut(s) 362
Aor13HI TCCGGA 1 cut(s) 988
AoxI GGCC 4 cut(s) 770, 936, 1076, 1125
ApeKI GCWGC 2 cut(s) 1220, 1341
ApoI RAATTY 6 cut(s) 28, 195, 398, 547, 602, 633
AspLEI GCGC 1 cut(s) 1341
AspS9I GGNCC 4 cut(s) 743, 936, 1125, 1360
AsuC2I CCSGG 1 cut(s) 530
AsuHPI GGTGA 3 cut(s) 129, 141, 692
AvaII GGWCC 2 cut(s) 743, 1360
BaeI ACNNNNGTAYC 2 cut(s) 78, 111
BamHI GGATCC 2 cut(s) 226, 1171
BanI GGYRCC 1 cut(s) 1093
BanII GRGCYC 3 cut(s) 356, 535, 1317
BarI GAAGNNNNNNTAC 2 cut(s) 1193, 1225
Bbv12I GWGCWC 2 cut(s) 356, 1317
BbvCI CCTCAGC 1 cut(s) 1134
BbvI GCAGC 2 cut(s) 1207, 1353
BccI CCATC 5 cut(s) 409, 671, 926, 998, 1363
BceAI ACGGC 2 cut(s) 138, 1214
BciT130I CCWGG 2 cut(s) 192, 1214
BciVI GTATCC 1 cut(s) 790
BclI TGATCA 2 cut(s) 243, 1179
BcnI CCSGG 1 cut(s) 530
BcoDI GTCTC 1 cut(s) 387
BfaI CTAG 2 cut(s) 474, 1067
BfmI CTRYAG 3 cut(s) 667, 1080, 1224
BfrI CTTAAG 1 cut(s) 335
BfuI GTATCC 1 cut(s) 790
BglII AGATCT 1 cut(s) 856
BisI GCNGC 2 cut(s) 1221, 1342
BlsI GCNGC 2 cut(s) 1222, 1343
BmcAI AGTACT 1 cut(s) 830
Bme1390I CCNGG 3 cut(s) 192, 530, 1214
Bme18I GGWCC 2 cut(s) 743, 1360
BmgT120I GGNCC 4 cut(s) 743, 936, 1125, 1360
BmiI GGNNCC 7 cut(s) 85, 126, 228, 745, 937, 1095, 1173
BmrFI CCNGG 3 cut(s) 192, 530, 1214
BmsI GCATC 6 cut(s) 349, 509, 580, 649, 699, 874
BplI GAGNNNNNCTC 2 cut(s) 331, 363
BpmI CTGGAG 2 cut(s) 174, 825
Bpu10I CCTNAGC 1 cut(s) 1134
BpuEI CTTGAG 1 cut(s) 670
BpuMI CCSGG 1 cut(s) 530
Bsa29I ATCGAT 1 cut(s) 675
BsaHI GRCGYC 1 cut(s) 1029
BsaWI WCCGGW 1 cut(s) 988
BsaXI ACNNNNNCTCC 2 cut(s) 75, 105
Bsc4I CCNNNNNNNGG 2 cut(s) 392, 752
Bse1I ACTGG 3 cut(s) 576, 842, 1095
Bse3DI GCAATG 1 cut(s) 246
BseAI TCCGGA 1 cut(s) 988
BseBI CCWGG 2 cut(s) 192, 1214
BseCI ATCGAT 1 cut(s) 675
BseGI GGATG 5 cut(s) 524, 547, 595, 640, 889
BseLI CCNNNNNNNGG 2 cut(s) 392, 752
BseMI GCAATG 1 cut(s) 246
BseMII CTCAG 5 cut(s) 354, 362, 369, 599, 1148
BseNI ACTGG 3 cut(s) 576, 842, 1095
BseRI GAGGAG 1 cut(s) 117
BseXI GCAGC 2 cut(s) 1207, 1353
BsgI GTGCAG 1 cut(s) 300
Bsh1236I CGCG 1 cut(s) 1339
BshFI GGCC 4 cut(s) 772, 938, 1078, 1127
BshNI GGYRCC 1 cut(s) 1093
BshVI ATCGAT 1 cut(s) 675
BsiHKAI GWGCWC 2 cut(s) 356, 1317
BsiSI CCGG 2 cut(s) 529, 989
BslFI GGGAC 1 cut(s) 1280
BslI CCNNNNNNNGG 2 cut(s) 392, 752
BsmAI GTCTC 1 cut(s) 387
BsmFI GGGAC 1 cut(s) 1280
BsmI GAATGC 1 cut(s) 1285
BsnI GGCC 4 cut(s) 772, 938, 1078, 1127
Bsp1286I GDGCHC 3 cut(s) 356, 535, 1317
Bsp13I TCCGGA 1 cut(s) 988
Bsp143I GATC 9 cut(s) 226, 243, 755, 846, 856, 1148, 1171, 1179, 1195
BspACI CCGC 3 cut(s) 158, 593, 1261
BspANI GGCC 4 cut(s) 772, 938, 1078, 1127
BspCNI CTCAG 5 cut(s) 355, 361, 368, 598, 1147
BspDI ATCGAT 1 cut(s) 675
BspEI TCCGGA 1 cut(s) 988
BspFNI CGCG 1 cut(s) 1339
BspLI GGNNCC 7 cut(s) 85, 126, 228, 745, 937, 1095, 1173
BspPI GGATC 7 cut(s) 221, 234, 763, 841, 1166, 1179, 1203
BspT107I GGYRCC 1 cut(s) 1093
BspTI CTTAAG 1 cut(s) 335
BsrDI GCAATG 1 cut(s) 246
BsrI ACTGG 3 cut(s) 576, 842, 1095
BssMI GATC 9 cut(s) 226, 243, 755, 846, 856, 1148, 1171, 1179, 1195
BssNI GRCGYC 1 cut(s) 1029
Bst2UI CCWGG 2 cut(s) 192, 1214
Bst4CI ACNGT 4 cut(s) 91, 259, 442, 578
Bst6I CTCTTC 1 cut(s) 135
BstACI GRCGYC 1 cut(s) 1029
BstAFI CTTAAG 1 cut(s) 335
BstC8I GCNNGC 1 cut(s) 375
BstDEI CTNAG 7 cut(s) 348, 355, 363, 585, 1134, 1328, 1345
BstF5I GGATG 5 cut(s) 524, 547, 595, 640, 889
BstFNI CGCG 1 cut(s) 1339
BstHHI GCGC 1 cut(s) 1341
BstKTI GATC 9 cut(s) 229, 246, 758, 849, 859, 1151, 1174, 1182, 1198
BstMAI GTCTC 1 cut(s) 387
BstMBI GATC 9 cut(s) 226, 243, 755, 846, 856, 1148, 1171, 1179, 1195
BstMWI GCNNNNNNNGC 3 cut(s) 935, 975, 1226
BstNI CCWGG 2 cut(s) 192, 1214
BstSCI CCNGG 3 cut(s) 190, 528, 1212
BstSFI CTRYAG 3 cut(s) 667, 1080, 1224
BstUI CGCG 1 cut(s) 1339
BstV1I GCAGC 2 cut(s) 1207, 1353
BstX2I RGATCY 4 cut(s) 226, 856, 1171, 1195
BstXI CCANNNNNNTGG 1 cut(s) 415
BstYI RGATCY 4 cut(s) 226, 856, 1171, 1195
Bsu15I ATCGAT 1 cut(s) 675
BsuI GTATCC 1 cut(s) 790
BsuRI GGCC 4 cut(s) 772, 938, 1078, 1127
BsuTUI ATCGAT 1 cut(s) 675
BtsCI GGATG 5 cut(s) 524, 547, 595, 640, 889
BtsIMutI CAGTG 2 cut(s) 255, 849
Cac8I GCNNGC 1 cut(s) 375
CaiI CAGNNNCTG 1 cut(s) 362
CfoI GCGC 1 cut(s) 1341
Cfr13I GGNCC 4 cut(s) 743, 936, 1125, 1360
ClaI ATCGAT 1 cut(s) 675
CsiI ACCWGGT 1 cut(s) 1212
Csp6I GTAC 4 cut(s) 95, 325, 829, 1049
CviAII CATG 7 cut(s) 66, 740, 752, 768, 824, 1122, 1129
CviQI GTAC 4 cut(s) 95, 325, 829, 1049
DdeI CTNAG 7 cut(s) 348, 355, 363, 585, 1134, 1328, 1345
DpnI GATC 9 cut(s) 228, 245, 757, 848, 858, 1150, 1173, 1181, 1197
DpnII GATC 9 cut(s) 226, 243, 755, 846, 856, 1148, 1171, 1179, 1195
DraIII CACNNNGTG 2 cut(s) 278, 1168
Eam1104I CTCTTC 1 cut(s) 135
EarI CTCTTC 1 cut(s) 135
EciI GGCGGA 1 cut(s) 147
Ecl136II GAGCTC 2 cut(s) 354, 1315
Eco147I AGGCCT 1 cut(s) 1078
Eco24I GRGCYC 3 cut(s) 356, 535, 1317
Eco47I GGWCC 2 cut(s) 743, 1360
Eco53kI GAGCTC 2 cut(s) 354, 1315
Eco57I CTGAAG 1 cut(s) 1220
EcoICRI GAGCTC 2 cut(s) 354, 1315
EcoRI GAATTC 1 cut(s) 195
EcoRII CCWGG 2 cut(s) 190, 1212
EcoT38I GRGCYC 3 cut(s) 356, 535, 1317
FaeI CATG 7 cut(s) 69, 743, 755, 771, 827, 1125, 1132
FaqI GGGAC 1 cut(s) 1280
FatI CATG 7 cut(s) 65, 739, 751, 767, 823, 1121, 1128
FbaI TGATCA 2 cut(s) 243, 1179
FblI GTMKAC 1 cut(s) 51
Fnu4HI GCNGC 2 cut(s) 1221, 1342
FokI GGATG 5 cut(s) 531, 554, 602, 627, 896
FriOI GRGCYC 3 cut(s) 356, 535, 1317
Fsp4HI GCNGC 2 cut(s) 1221, 1342
FspBI CTAG 2 cut(s) 474, 1067
GlaI GCGC 1 cut(s) 1340
GluI GCNGC 2 cut(s) 1221, 1342
GsuI CTGGAG 2 cut(s) 174, 825
HaeIII GGCC 4 cut(s) 772, 938, 1078, 1127
HapII CCGG 2 cut(s) 529, 989
HhaI GCGC 1 cut(s) 1341
Hin1I GRCGYC 1 cut(s) 1029
Hin1II CATG 7 cut(s) 69, 743, 755, 771, 827, 1125, 1132
Hin6I GCGC 1 cut(s) 1339
HinP1I GCGC 1 cut(s) 1339
HincII GTYRAC 1 cut(s) 1014
HindII GTYRAC 1 cut(s) 1014
HindIII AAGCTT 4 cut(s) 5, 902, 959, 1154
HinfI GANTC 1 cut(s) 683
HpaI GTTAAC 1 cut(s) 1014
HpaII CCGG 2 cut(s) 529, 989
HphI GGTGA 3 cut(s) 129, 141, 692
Hpy166II GTNNAC 3 cut(s) 52, 526, 1014
Hpy188I TCNGA 6 cut(s) 351, 358, 861, 910, 1200, 1319
Hpy188III TCNNGA 6 cut(s) 485, 565, 587, 725, 794, 989
Hpy8I GTNNAC 3 cut(s) 52, 526, 1014
HpyAV CCTTC 3 cut(s) 193, 361, 1068
HpyCH4III ACNGT 4 cut(s) 91, 259, 442, 578
HpyCH4IV ACGT 1 cut(s) 1029
HpyCH4V TGCA 9 cut(s) 269, 281, 581, 739, 803, 823, 834, 1243, 1285
HpyF10VI GCNNNNNNNGC 3 cut(s) 935, 975, 1226
HpyF3I CTNAG 7 cut(s) 348, 355, 363, 585, 1134, 1328, 1345
HpySE526I ACGT 1 cut(s) 1029
Hsp92I GRCGYC 1 cut(s) 1029
Hsp92II CATG 7 cut(s) 69, 743, 755, 771, 827, 1125, 1132
HspAI GCGC 1 cut(s) 1339
Kpn2I TCCGGA 1 cut(s) 988
Ksp22I TGATCA 2 cut(s) 243, 1179
KspAI GTTAAC 1 cut(s) 1014
Kzo9I GATC 9 cut(s) 226, 243, 755, 846, 856, 1148, 1171, 1179, 1195
LmnI GCTCC 5 cut(s) 83, 130, 370, 991, 1057
Lsp1109I GCAGC 2 cut(s) 1207, 1353
LweI GCATC 6 cut(s) 349, 509, 580, 649, 699, 874
MabI ACCWGGT 1 cut(s) 1212
MaeI CTAG 2 cut(s) 474, 1067
MaeII ACGT 1 cut(s) 1029
MaeIII GTNAC 8 cut(s) 209, 259, 291, 436, 680, 1025, 1117, 1256
MalI GATC 9 cut(s) 228, 245, 757, 848, 858, 1150, 1173, 1181, 1197
MboI GATC 9 cut(s) 226, 243, 755, 846, 856, 1148, 1171, 1179, 1195
MboII GAAGA 4 cut(s) 105, 122, 250, 1083
MfeI CAATTG 2 cut(s) 162, 734
MflI RGATCY 4 cut(s) 226, 856, 1171, 1195
MhlI GDGCHC 3 cut(s) 356, 535, 1317
MlyI GAGTC 1 cut(s) 677
MmeI TCCRAC 1 cut(s) 61
MroI TCCGGA 1 cut(s) 988
MseI TTAA 3 cut(s) 336, 764, 1013
MslI CAYNNNNRTG 4 cut(s) 298, 413, 540, 766
MspCI CTTAAG 1 cut(s) 335
MspI CCGG 2 cut(s) 529, 989
MspR9I CCNGG 3 cut(s) 192, 530, 1214
MunI CAATTG 2 cut(s) 162, 734
Mva1269I GAATGC 1 cut(s) 1285
MvaI CCWGG 2 cut(s) 192, 1214
MvnI CGCG 1 cut(s) 1339
MwoI GCNNNNNNNGC 3 cut(s) 935, 975, 1226
NciI CCSGG 1 cut(s) 530
NdeII GATC 9 cut(s) 226, 243, 755, 846, 856, 1148, 1171, 1179, 1195
NlaIII CATG 7 cut(s) 69, 743, 755, 771, 827, 1125, 1132
NlaIV GGNNCC 7 cut(s) 85, 126, 228, 745, 937, 1095, 1173
NmuCI GTSAC 6 cut(s) 209, 259, 291, 680, 1025, 1117
OliI CACNNNNGTG 1 cut(s) 298
PceI AGGCCT 1 cut(s) 1078
PctI GAATGC 1 cut(s) 1285
PfoI TCCNGGA 1 cut(s) 190
PkrI GCNGC 2 cut(s) 1222, 1343
PleI GAGTC 1 cut(s) 677
PpsI GAGTC 1 cut(s) 677
Psp124BI GAGCTC 2 cut(s) 356, 1317
Psp6I CCWGG 2 cut(s) 190, 1212
PspGI CCWGG 2 cut(s) 190, 1212
PspN4I GGNNCC 7 cut(s) 85, 126, 228, 745, 937, 1095, 1173
PspPI GGNCC 4 cut(s) 743, 936, 1125, 1360
PstNI CAGNNNCTG 1 cut(s) 362
PsuI RGATCY 4 cut(s) 226, 856, 1171, 1195
RsaI GTAC 4 cut(s) 96, 326, 830, 1050
RsaNI GTAC 4 cut(s) 95, 325, 829, 1049
RseI CAYNNNNRTG 4 cut(s) 298, 413, 540, 766
SacI GAGCTC 2 cut(s) 356, 1317
SaqAI TTAA 3 cut(s) 336, 764, 1013
SatI GCNGC 2 cut(s) 1221, 1342
Sau3AI GATC 9 cut(s) 226, 243, 755, 846, 856, 1148, 1171, 1179, 1195
Sau96I GGNCC 4 cut(s) 743, 936, 1125, 1360
ScaI AGTACT 1 cut(s) 830
SchI GAGTC 1 cut(s) 677
ScrFI CCNGG 3 cut(s) 192, 530, 1214
SduI GDGCHC 3 cut(s) 356, 535, 1317
SexAI ACCWGGT 1 cut(s) 1212
SfaNI GCATC 6 cut(s) 349, 509, 580, 649, 699, 874
SfcI CTRYAG 3 cut(s) 667, 1080, 1224
SinI GGWCC 2 cut(s) 743, 1360
SmiMI CAYNNNNRTG 4 cut(s) 298, 413, 540, 766
SmlI CTYRAG 2 cut(s) 335, 685
SmoI CTYRAG 2 cut(s) 335, 685
SseBI AGGCCT 1 cut(s) 1078
SsiI CCGC 3 cut(s) 158, 593, 1261
SspI AATATT 1 cut(s) 874
SspMI CTAG 2 cut(s) 474, 1067
SstI GAGCTC 2 cut(s) 356, 1317
StuI AGGCCT 1 cut(s) 1078
StyD4I CCNGG 3 cut(s) 190, 528, 1212
TaaI ACNGT 4 cut(s) 91, 259, 442, 578
TaiI ACGT 1 cut(s) 1032
TaqI TCGA 2 cut(s) 675, 1311
TaqII GACCGA 2 cut(s) 1161, 1348
TatI WGTACW 3 cut(s) 324, 828, 1048
Tru1I TTAA 3 cut(s) 336, 764, 1013
Tru9I TTAA 3 cut(s) 336, 764, 1013
TscAI CASTG 2 cut(s) 262, 849
TseFI GTSAC 6 cut(s) 209, 259, 291, 680, 1025, 1117
TseI GCWGC 2 cut(s) 1220, 1341
Tsp45I GTSAC 6 cut(s) 209, 259, 291, 680, 1025, 1117
TspDTI ATGAA 6 cut(s) 17, 159, 558, 682, 717, 797
TspRI CASTG 2 cut(s) 262, 849
Vha464I CTTAAG 1 cut(s) 335
VpaK11BI GGWCC 2 cut(s) 743, 1360
XapI RAATTY 6 cut(s) 28, 195, 398, 547, 602, 633
XmiI GTMKAC 1 cut(s) 51
XspI CTAG 2 cut(s) 474, 1067
ZraI GACGTC 1 cut(s) 1030
ZrmI AGTACT 1 cut(s) 830
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.