pycom15g11870

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
8030263 .. 8033387
3125 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g11870.5

Sequence Viewer

Length: 1221 bp
ATGAAGCTGCTGCTGCTGCTTCTTCTTCTTGTTCAAATTTTGCTTTTGCTTCTTGTACAACCAAATCCCAATTGTGTTGGCGCCACACCGACTGACCCATTTCTTTCCTCCACGTCTACTCCTCTCTCCTCGCCCATTTCTCCAATTGCTTCATCAATGGCTACCTTCACTCCAGGTATTGAACAAGGAAGTGAAGGGCATCAAATGGGTTCACATAAGAAAATGCTAATTCCACTCATAGTTACTTGCACTGCACTTGGTGTCGTTTTTTTGTTACTGTTGTGCTTGTGGATTTACCACAAAAAGTTTCAACACAAATCCCACAAGAAAAGTGGTCAGAGCAGCTCAGATGCCGAGAAGGGGCTTGCATTGGGTCCATTTGTGGGTAAATTCAATTCCGTAAGGATGGTTTCTAAGAAAGGATCTGTTCCAGTAATTGAATACAAGAATGAGGTCGAGTTGTTGCATAAAATTCAGCATCCAAATATAATTACCTTTTTGGGTTGCAGTATTAATGGTGACTCAAGGTTCATTGTTTATGAACTGATGCATAGCGGATCTCTGGAAACTCAATTGCACGGACCCTCTCATGGCTCCGCATTAACATGGCCTATGCGAATGAAAATTGCCCTTGATGCAGCAAGAGGGTTAGAATATCTACACGAGTACTGCAGCCCCCCAGTGATCCATAGAGATCTGAAAACATCTAATATTCTTTTAGATGCCAACTTCAATGCCAAGCTCTCTGATTTTGGTCTTGCCGTGGCTGACGGGGCCAAAACTAGTAAGAACATCAAGGTCTCTGGAACCTTGGGTTATGTTGCTCCAGAGTATCTTTTAGATGGTAAATTGACGGATAAGAGTGATGTCTATGCTTTTGGAGTTGTGCTTCTGGAGCTTCTACTTGGAAGAAGGCCTGTTGAAAAACTTTCACCAACTCAGTGCCAATCTATAGTCACATGGGCCATGCCTCAGCTCACTGACAGATCAAAGCTTCCAAACATTGTGGATCCCGTGATCAAAGATTCCATGGATCTGAAGCACTTATACCAGGTTGCCGCTGTCGCCGTGTTATGTGTGCAACCGGAACCAAGTTACCGCCCACTCATAACAGATGTTTTGCATTCCCTTGTTCCTCTTGTTCCGGTGGATCTCGGAGGGACACTAAGAGTTACCCAACCTGGACCTCCCGGAAGCACCCCAGTGTCTCCTGGTCACTGA

Protein Analysis

407

Amino Acids

44.06

Weight (kDa)

8.7

Isoelectric Point (pI)

41.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 80
AccI GTMKAC 1 cut(s) 116
AciI CCGC 4 cut(s) 555, 597, 1059, 1099
AclWI GGATC 7 cut(s) 430, 565, 679, 1004, 1017, 1041, 1158
AcsI RAATTY 3 cut(s) 36, 389, 471
AcuI CTGAAG 1 cut(s) 1058
AcyI GRCGYC 1 cut(s) 81
AdeI CACNNNGTG 1 cut(s) 260
AfaI GTAC 2 cut(s) 57, 668
AfiI CCNNNNNNNGG 3 cut(s) 360, 383, 590
AgsI TTSAA 7 cut(s) 35, 182, 311, 394, 440, 733, 923
AhlI ACTAGT 1 cut(s) 782
AjiI CACGTC 1 cut(s) 114
AjnI CCWGG 4 cut(s) 172, 1050, 1180, 1210
AleI CACNNNNGTG 1 cut(s) 1202
AluBI AGCT 6 cut(s) 7, 345, 742, 898, 976, 994
AluI AGCT 6 cut(s) 7, 345, 742, 898, 976, 994
Alw26I GTCTC 2 cut(s) 805, 1212
AlwI GGATC 7 cut(s) 430, 565, 679, 1004, 1017, 1041, 1158
AoxI GGCC 4 cut(s) 608, 774, 914, 963
ApeKI GCWGC 7 cut(s) 7, 10, 13, 16, 342, 638, 672
ApoI RAATTY 3 cut(s) 36, 389, 471
AseI ATTAAT 1 cut(s) 513
AspLEI GCGC 1 cut(s) 83
AspS9I GGNCC 5 cut(s) 374, 581, 774, 963, 1184
AsuC2I CCSGG 1 cut(s) 1191
AsuHPI GGTGA 2 cut(s) 530, 924
AvaII GGWCC 3 cut(s) 374, 581, 1184
BamHI GGATCC 1 cut(s) 1009
BanI GGYRCC 1 cut(s) 80
BarI GAAGNNNNNNTAC 2 cut(s) 1031, 1063
BauI CACGAG 1 cut(s) 662
BbvCI CCTCAGC 1 cut(s) 972
BbvI GCAGC 4 cut(s) 3, 354, 650, 684
BccI CCATC 2 cut(s) 400, 836
BceAI ACGGC 2 cut(s) 746, 1052
BciT130I CCWGG 4 cut(s) 174, 1052, 1182, 1212
BclI TGATCA 1 cut(s) 1017
BcnI CCSGG 1 cut(s) 1191
BcoDI GTCTC 2 cut(s) 805, 1212
BcuI ACTAGT 1 cut(s) 782
BfaI CTAG 1 cut(s) 783
BfmI CTRYAG 2 cut(s) 670, 951
BfoI RGCGCY 1 cut(s) 84
BglII AGATCT 1 cut(s) 694
BisI GCNGC 8 cut(s) 8, 11, 14, 17, 343, 639, 673, 1059
BlsI GCNGC 8 cut(s) 9, 12, 15, 18, 344, 640, 674, 1060
BmcAI AGTACT 1 cut(s) 668
Bme1390I CCNGG 5 cut(s) 174, 1052, 1182, 1191, 1212
Bme18I GGWCC 3 cut(s) 374, 581, 1184
BmgBI CACGTC 1 cut(s) 114
BmgT120I GGNCC 5 cut(s) 374, 581, 774, 963, 1184
BmiI GGNNCC 8 cut(s) 82, 375, 583, 595, 775, 808, 1011, 1089
BmrFI CCNGG 5 cut(s) 174, 1052, 1182, 1191, 1212
BmrI ACTGGG 2 cut(s) 674, 1196
BmsI GCATC 6 cut(s) 208, 340, 487, 537, 625, 712
BmuI ACTGGG 2 cut(s) 674, 1196
BpmI CTGGAG 3 cut(s) 156, 810, 914
Bpu10I CCTNAGC 1 cut(s) 972
BpuEI CTTGAG 1 cut(s) 508
BpuMI CCSGG 1 cut(s) 1191
BsaHI GRCGYC 1 cut(s) 81
BsaI GGTCTC 1 cut(s) 805
BsaJI CCNNGG 3 cut(s) 762, 810, 1029
BsaWI WCCGGW 2 cut(s) 1084, 1144
BsaXI ACNNNNNCTCC 4 cut(s) 103, 133, 154, 184
Bsc4I CCNNNNNNNGG 3 cut(s) 360, 383, 590
Bse1I ACTGG 3 cut(s) 431, 680, 1202
BseBI CCWGG 4 cut(s) 174, 1052, 1182, 1212
BseDI CCNNGG 3 cut(s) 762, 810, 1029
BseGI GGATG 2 cut(s) 411, 478
BseLI CCNNNNNNNGG 3 cut(s) 360, 383, 590
BseMII CTCAG 3 cut(s) 360, 953, 986
BseNI ACTGG 3 cut(s) 431, 680, 1202
BseRI GAGGAG 2 cut(s) 111, 118
BseXI GCAGC 4 cut(s) 3, 354, 650, 684
BsgI GTGCAG 1 cut(s) 237
BshFI GGCC 4 cut(s) 610, 776, 916, 965
BshNI GGYRCC 1 cut(s) 80
BsiSI CCGG 3 cut(s) 1085, 1145, 1191
BslFI GGGAC 1 cut(s) 1174
BslI CCNNNNNNNGG 3 cut(s) 360, 383, 590
BsmAI GTCTC 2 cut(s) 805, 1212
BsmFI GGGAC 1 cut(s) 1174
BsmI GAATGC 1 cut(s) 1123
BsnI GGCC 4 cut(s) 610, 776, 916, 965
Bso31I GGTCTC 1 cut(s) 805
Bsp1407I TGTACA 1 cut(s) 55
Bsp143I GATC 9 cut(s) 422, 557, 684, 694, 986, 1009, 1017, 1033, 1150
Bsp19I CCATGG 1 cut(s) 1029
BspACI CCGC 4 cut(s) 555, 597, 1059, 1099
BspANI GGCC 4 cut(s) 610, 776, 916, 965
BspCNI CTCAG 3 cut(s) 359, 952, 985
BspLI GGNNCC 8 cut(s) 82, 375, 583, 595, 775, 808, 1011, 1089
BspMAI CTGCAG 1 cut(s) 674
BspPI GGATC 7 cut(s) 430, 565, 679, 1004, 1017, 1041, 1158
BspT107I GGYRCC 1 cut(s) 80
BspTNI GGTCTC 1 cut(s) 805
BsrGI TGTACA 1 cut(s) 55
BsrI ACTGG 3 cut(s) 431, 680, 1202
BssECI CCNNGG 3 cut(s) 762, 810, 1029
BssMI GATC 9 cut(s) 422, 557, 684, 694, 986, 1009, 1017, 1033, 1150
BssNI GRCGYC 1 cut(s) 81
BssSI CACGAG 1 cut(s) 662
BssT1I CCWWGG 2 cut(s) 810, 1029
Bst2BI CACGAG 1 cut(s) 662
Bst2UI CCWGG 4 cut(s) 174, 1052, 1182, 1212
Bst4CI ACNGT 1 cut(s) 279
BstACI GRCGYC 1 cut(s) 81
BstAUI TGTACA 1 cut(s) 55
BstC8I GCNNGC 1 cut(s) 366
BstDEI CTNAG 5 cut(s) 346, 414, 939, 972, 1166
BstDSI CCRYGG 2 cut(s) 762, 1029
BstF5I GGATG 2 cut(s) 411, 478
BstH2I RGCGCY 1 cut(s) 84
BstHHI GCGC 1 cut(s) 83
BstKTI GATC 9 cut(s) 425, 560, 687, 697, 989, 1012, 1020, 1036, 1153
BstMAI GTCTC 2 cut(s) 805, 1212
BstMBI GATC 9 cut(s) 422, 557, 684, 694, 986, 1009, 1017, 1033, 1150
BstMWI GCNNNNNNNGC 6 cut(s) 13, 16, 635, 773, 895, 1064
BstNI CCWGG 4 cut(s) 174, 1052, 1182, 1212
BstSCI CCNGG 5 cut(s) 172, 1050, 1180, 1189, 1210
BstSFI CTRYAG 2 cut(s) 670, 951
BstV1I GCAGC 4 cut(s) 3, 354, 650, 684
BstX2I RGATCY 6 cut(s) 422, 557, 694, 1009, 1033, 1150
BstYI RGATCY 6 cut(s) 422, 557, 694, 1009, 1033, 1150
BsuRI GGCC 4 cut(s) 610, 776, 916, 965
BtgI CCRYGG 2 cut(s) 762, 1029
BtrI CACGTC 1 cut(s) 114
BtsCI GGATG 2 cut(s) 411, 478
BtsI GCAGTG 1 cut(s) 249
BtsIMutI CAGTG 6 cut(s) 249, 687, 947, 978, 1209, 1216
Cac8I GCNNGC 1 cut(s) 366
CfoI GCGC 1 cut(s) 83
Cfr13I GGNCC 5 cut(s) 374, 581, 774, 963, 1184
CsiI ACCWGGT 1 cut(s) 1050
Csp6I GTAC 2 cut(s) 56, 667
CspCI CAANNNNNGTGG 4 cut(s) 313, 348, 987, 1022
CviAII CATG 5 cut(s) 590, 606, 960, 967, 1030
CviQI GTAC 2 cut(s) 56, 667
DdeI CTNAG 5 cut(s) 346, 414, 939, 972, 1166
DinI GGCGCC 1 cut(s) 82
DpnI GATC 9 cut(s) 424, 559, 686, 696, 988, 1011, 1019, 1035, 1152
DpnII GATC 9 cut(s) 422, 557, 684, 694, 986, 1009, 1017, 1033, 1150
DraIII CACNNNGTG 1 cut(s) 260
Eco130I CCWWGG 2 cut(s) 810, 1029
Eco147I AGGCCT 1 cut(s) 916
Eco31I GGTCTC 1 cut(s) 805
Eco47I GGWCC 3 cut(s) 374, 581, 1184
Eco57I CTGAAG 1 cut(s) 1058
EcoRII CCWGG 4 cut(s) 172, 1050, 1180, 1210
EcoT14I CCWWGG 2 cut(s) 810, 1029
EcoT22I ATGCAT 1 cut(s) 552
EgeI GGCGCC 1 cut(s) 82
EheI GGCGCC 1 cut(s) 82
ErhI CCWWGG 2 cut(s) 810, 1029
FaeI CATG 5 cut(s) 593, 609, 963, 970, 1033
FaqI GGGAC 1 cut(s) 1174
FatI CATG 5 cut(s) 589, 605, 959, 966, 1029
FbaI TGATCA 1 cut(s) 1017
FblI GTMKAC 1 cut(s) 116
Fnu4HI GCNGC 8 cut(s) 8, 11, 14, 17, 343, 639, 673, 1059
FokI GGATG 2 cut(s) 418, 465
Fsp4HI GCNGC 8 cut(s) 8, 11, 14, 17, 343, 639, 673, 1059
FspBI CTAG 1 cut(s) 783
GlaI GCGC 1 cut(s) 82
GluI GCNGC 8 cut(s) 8, 11, 14, 17, 343, 639, 673, 1059
GsuI CTGGAG 3 cut(s) 156, 810, 914
HaeII RGCGCY 1 cut(s) 84
HaeIII GGCC 4 cut(s) 610, 776, 916, 965
HapII CCGG 3 cut(s) 1085, 1145, 1191
HhaI GCGC 1 cut(s) 83
Hin1I GRCGYC 1 cut(s) 81
Hin1II CATG 5 cut(s) 593, 609, 963, 970, 1033
Hin6I GCGC 1 cut(s) 81
HinP1I GCGC 1 cut(s) 81
HindIII AAGCTT 1 cut(s) 992
HinfI GANTC 2 cut(s) 521, 1025
HpaII CCGG 3 cut(s) 1085, 1145, 1191
HphI GGTGA 2 cut(s) 530, 924
Hpy166II GTNNAC 2 cut(s) 117, 212
Hpy188I TCNGA 6 cut(s) 339, 349, 699, 748, 1038, 1157
Hpy188III TCNNGA 4 cut(s) 563, 804, 827, 893
Hpy8I GTNNAC 2 cut(s) 117, 212
HpyAV CCTTC 4 cut(s) 175, 188, 352, 906
HpyCH4III ACNGT 1 cut(s) 279
HpyCH4IV ACGT 1 cut(s) 113
HpyF10VI GCNNNNNNNGC 6 cut(s) 13, 16, 635, 773, 895, 1064
HpyF3I CTNAG 5 cut(s) 346, 414, 939, 972, 1166
HpySE526I ACGT 1 cut(s) 113
Hsp92I GRCGYC 1 cut(s) 81
Hsp92II CATG 5 cut(s) 593, 609, 963, 970, 1033
HspAI GCGC 1 cut(s) 81
KasI GGCGCC 1 cut(s) 80
Ksp22I TGATCA 1 cut(s) 1017
Kzo9I GATC 9 cut(s) 422, 557, 684, 694, 986, 1009, 1017, 1033, 1150
LmnI GCTCC 3 cut(s) 599, 829, 895
Lsp1109I GCAGC 4 cut(s) 3, 354, 650, 684
LweI GCATC 6 cut(s) 208, 340, 487, 537, 625, 712
MabI ACCWGGT 1 cut(s) 1050
MaeI CTAG 1 cut(s) 783
MaeII ACGT 1 cut(s) 113
MaeIII GTNAC 7 cut(s) 241, 273, 518, 955, 1094, 1171, 1214
MalI GATC 9 cut(s) 424, 559, 686, 696, 988, 1011, 1019, 1035, 1152
MboI GATC 9 cut(s) 422, 557, 684, 694, 986, 1009, 1017, 1033, 1150
MboII GAAGA 3 cut(s) 14, 17, 921
MfeI CAATTG 3 cut(s) 70, 144, 572
MflI RGATCY 6 cut(s) 422, 557, 694, 1009, 1033, 1150
Mly113I GGCGCC 1 cut(s) 81
MlyI GAGTC 1 cut(s) 515
Mph1103I ATGCAT 1 cut(s) 552
MseI TTAA 2 cut(s) 513, 602
MslI CAYNNNNRTG 2 cut(s) 604, 1202
MspA1I CMGCKG 1 cut(s) 1061
MspI CCGG 3 cut(s) 1085, 1145, 1191
MspR9I CCNGG 5 cut(s) 174, 1052, 1182, 1191, 1212
MunI CAATTG 3 cut(s) 70, 144, 572
Mva1269I GAATGC 1 cut(s) 1123
MvaI CCWGG 4 cut(s) 174, 1052, 1182, 1212
MwoI GCNNNNNNNGC 6 cut(s) 13, 16, 635, 773, 895, 1064
NarI GGCGCC 1 cut(s) 81
NciI CCSGG 1 cut(s) 1191
NcoI CCATGG 1 cut(s) 1029
NdeII GATC 9 cut(s) 422, 557, 684, 694, 986, 1009, 1017, 1033, 1150
NlaIII CATG 5 cut(s) 593, 609, 963, 970, 1033
NlaIV GGNNCC 8 cut(s) 82, 375, 583, 595, 775, 808, 1011, 1089
NmeAIII GCCGAG 1 cut(s) 379
NmuCI GTSAC 3 cut(s) 518, 955, 1214
NsiI ATGCAT 1 cut(s) 552
OliI CACNNNNGTG 1 cut(s) 1202
PceI AGGCCT 1 cut(s) 916
PctI GAATGC 1 cut(s) 1123
PfeI GAWTC 1 cut(s) 1025
PfoI TCCNGGA 1 cut(s) 1189
PkrI GCNGC 8 cut(s) 9, 12, 15, 18, 344, 640, 674, 1060
PleI GAGTC 1 cut(s) 515
PluTI GGCGCC 1 cut(s) 84
PpsI GAGTC 1 cut(s) 515
PshBI ATTAAT 1 cut(s) 513
Psp6I CCWGG 4 cut(s) 172, 1050, 1180, 1210
PspGI CCWGG 4 cut(s) 172, 1050, 1180, 1210
PspN4I GGNNCC 8 cut(s) 82, 375, 583, 595, 775, 808, 1011, 1089
PspPI GGNCC 5 cut(s) 374, 581, 774, 963, 1184
PstI CTGCAG 1 cut(s) 674
PsuI RGATCY 6 cut(s) 422, 557, 694, 1009, 1033, 1150
RsaI GTAC 2 cut(s) 57, 668
RsaNI GTAC 2 cut(s) 56, 667
RseI CAYNNNNRTG 2 cut(s) 604, 1202
SaqAI TTAA 2 cut(s) 513, 602
SatI GCNGC 8 cut(s) 8, 11, 14, 17, 343, 639, 673, 1059
Sau3AI GATC 9 cut(s) 422, 557, 684, 694, 986, 1009, 1017, 1033, 1150
Sau96I GGNCC 5 cut(s) 374, 581, 774, 963, 1184
ScaI AGTACT 1 cut(s) 668
SchI GAGTC 1 cut(s) 515
ScrFI CCNGG 5 cut(s) 174, 1052, 1182, 1191, 1212
SexAI ACCWGGT 1 cut(s) 1050
SfaNI GCATC 6 cut(s) 208, 340, 487, 537, 625, 712
SfcI CTRYAG 2 cut(s) 670, 951
SfoI GGCGCC 1 cut(s) 82
SinI GGWCC 3 cut(s) 374, 581, 1184
SmiMI CAYNNNNRTG 2 cut(s) 604, 1202
SmlI CTYRAG 1 cut(s) 523
SmoI CTYRAG 1 cut(s) 523
SpeI ACTAGT 1 cut(s) 782
SseBI AGGCCT 1 cut(s) 916
SsiI CCGC 4 cut(s) 555, 597, 1059, 1099
SspDI GGCGCC 1 cut(s) 80
SspI AATATT 1 cut(s) 712
SspMI CTAG 1 cut(s) 783
StuI AGGCCT 1 cut(s) 916
StyD4I CCNGG 5 cut(s) 172, 1050, 1180, 1189, 1210
StyI CCWWGG 2 cut(s) 810, 1029
TaaI ACNGT 1 cut(s) 279
TaiI ACGT 1 cut(s) 116
TaqI TCGA 1 cut(s) 456
TatI WGTACW 2 cut(s) 55, 666
TauI GCSGC 1 cut(s) 1061
TfiI GAWTC 1 cut(s) 1025
Tru1I TTAA 2 cut(s) 513, 602
Tru9I TTAA 2 cut(s) 513, 602
TscAI CASTG 5 cut(s) 256, 687, 947, 985, 1209
TseFI GTSAC 3 cut(s) 518, 955, 1214
TseI GCWGC 7 cut(s) 7, 10, 13, 16, 342, 638, 672
Tsp45I GTSAC 3 cut(s) 518, 955, 1214
TspDTI ATGAA 5 cut(s) 17, 141, 520, 555, 635
TspGWI ACGGA 3 cut(s) 388, 594, 869
TspRI CASTG 5 cut(s) 256, 687, 947, 985, 1209
VpaK11BI GGWCC 3 cut(s) 374, 581, 1184
VspI ATTAAT 1 cut(s) 513
XapI RAATTY 3 cut(s) 36, 389, 471
XcmI CCANNNNNNNNNTGG 1 cut(s) 329
XmiI GTMKAC 1 cut(s) 116
XspI CTAG 1 cut(s) 783
ZrmI AGTACT 1 cut(s) 668
Zsp2I ATGCAT 1 cut(s) 552
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.