MD08G1154200.v1.1

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Forward (+)
17000427 .. 17004094
3668 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1154200.v1.1.491

Sequence Viewer

Length: 1368 bp
ATGAAGCTTCTTCTTCTTCTTCTTGTTCAAGTTTTGCTTTTGCTGCTTGTACAGCCAACTCCCATTTGTGTTGGCGCCACACCGACTGGCCCTTTTCTTTCCTCCATATCCGCTCCTCCCTCCTCGCACATTTCTCCAATTGCTTCATCAATGGCTACTTTCACTCCAGGAATTGAAGAAGGAAGTGAAAGGCATCAAATTGGTTCACATAGGACAATGCTAATTGCACTCATTGTTACCTGCACTGCACTTGGTGTAGTTCTTTTATCACTGTTGTGCTTGTGGATTTACCACAAAAAATTTCCACACAAATCCCCTAAGAAAAGTTCTCAGAGCAACTCAGATGCCGAGAAGGGGCTTGCATTGGGTCCATTTGTGGGTAAATTCAATTCCACAAGGATGGTTTCTAAGAAAGGATCTGTTCCAGTAATTGAATATAAGGGACTGGAAAAAGGCACCAACGATTTTCATGAAAGTAATATTATTGGTGAGGGTGGATTCGGATGCGTTTATAAAGCTTGGTTGGATAATAATTTGCTTGTTGCAGTCAAGAAACTAGACTGTGCAAGTCAGGATGCTGAGAGAGAATATGAGAATGAGGTGGAGTTGTTGCATAAAATTCAGCATCCAAATATAATTACCTTTTTGGGTTGTAGTATTAATGGTGACTCAAGGTTCATCGTTTACGAACTGATGCATAATGGATCTGTGGAAAGTCAATTGCATGGACACTCTCATGGTTCCGTATTAACATGGCCTATGCGAATGAAAATCGCTCTGGATGCAGCAAGAGGGCTAGAATATCTACACGAGTATTGCAACCCTCCAGTGATCCATAGAGAGCTGAAAACATCTAATATTCTTTTAGATGCCAACTTCAATGCCAAGCTTTCAGATTTTGGTCTTGCCGTGGCTGACAGGGCCAAAAACAGTAAGAATGTCAAGCTCTCTGGGACCTTGGGTTATGTTGCTCCAGAGTATCTTTTAGATGGTAAATTGACGGATAAGAGTGATGTCTATGCTTTTGGAGTTGTGCTTCTGGAGCTTCTACTAGGAAGAAGGCCTGTTGAAAAACTGGCACCAACTCAGTGCCAATCTATAGTCACATGGGCCATGCCTCAGCTCACTGACAGATCAAAGCTTCCAAACATTGTGGATCCTGTGATCAAAGATTCCATGGATTTGAAGCACTTATACCAGGTTGCTGCTGTCGCTGTGTTATGTGTGCAACCGGAACCAAGTTACCGCCCTCTGATAACAGATGTTTTACATTCTCTTGTCCCTCTTGTACCGGTGGAGCTTGGAGGGACACTAAGAGTTACCCAACCTGGACCTCCAGGAAGCGCCCCAGTTTCTCCTGGTCATTGA

Protein Analysis

456

Amino Acids

49.56

Weight (kDa)

7.65

Isoelectric Point (pI)

39.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 156 - 376 2.2e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 159 - 393 3.2e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 513
Acc36I ACCTGC 1 cut(s) 248
AccB1I GGYRCC 3 cut(s) 74, 455, 1078
AccBSI CCGCTC 1 cut(s) 113
AciI CCGC 2 cut(s) 111, 1246
AclWI GGATC 5 cut(s) 424, 712, 826, 1151, 1164
AcsI RAATTY 3 cut(s) 299, 383, 618
AcyI GRCGYC 1 cut(s) 75
AdeI CACNNNGTG 1 cut(s) 254
AfaI GTAC 2 cut(s) 51, 1290
AfiI CCNNNNNNNGG 2 cut(s) 354, 377
AgeI ACCGGT 1 cut(s) 1291
AgsI TTSAA 7 cut(s) 29, 176, 388, 434, 880, 1070, 1186
AjnI CCWGG 5 cut(s) 166, 1197, 1327, 1336, 1357
AleI CACNNNNGTG 1 cut(s) 274
AluBI AGCT 9 cut(s) 7, 518, 844, 889, 946, 1045, 1123, 1141, 1300
AluI AGCT 9 cut(s) 7, 518, 844, 889, 946, 1045, 1123, 1141, 1300
AlwI GGATC 5 cut(s) 424, 712, 826, 1151, 1164
AoxI GGCC 5 cut(s) 88, 755, 921, 1061, 1110
ApeKI GCWGC 3 cut(s) 43, 785, 1205
ApoI RAATTY 3 cut(s) 299, 383, 618
AseI ATTAAT 1 cut(s) 660
AsiGI ACCGGT 1 cut(s) 1291
AspLEI GCGC 2 cut(s) 77, 1346
AspS9I GGNCC 6 cut(s) 89, 368, 921, 954, 1110, 1331
AsuHPI GGTGA 2 cut(s) 500, 677
AvaII GGWCC 3 cut(s) 368, 954, 1331
BamHI GGATCC 1 cut(s) 1156
BanI GGYRCC 3 cut(s) 74, 455, 1078
BarI GAAGNNNNNNTAC 2 cut(s) 1178, 1210
BauI CACGAG 1 cut(s) 809
BbvCI CCTCAGC 1 cut(s) 1119
BbvI GCAGC 3 cut(s) 30, 797, 1192
BccI CCATC 2 cut(s) 394, 983
BceAI ACGGC 1 cut(s) 893
BciT130I CCWGG 5 cut(s) 168, 1199, 1329, 1338, 1359
BclI TGATCA 1 cut(s) 1164
BfaI CTAG 3 cut(s) 557, 797, 1052
BfmI CTRYAG 1 cut(s) 1098
BfoI RGCGCY 2 cut(s) 78, 1347
BfuAI ACCTGC 1 cut(s) 248
BisI GCNGC 3 cut(s) 44, 786, 1206
BlsI GCNGC 3 cut(s) 45, 787, 1207
Bme1390I CCNGG 5 cut(s) 168, 1199, 1329, 1338, 1359
Bme18I GGWCC 3 cut(s) 368, 954, 1331
BmgT120I GGNCC 6 cut(s) 89, 368, 921, 954, 1110, 1331
BmiI GGNNCC 8 cut(s) 76, 369, 457, 742, 955, 1080, 1158, 1236
BmrFI CCNGG 5 cut(s) 168, 1199, 1329, 1338, 1359
BmrI ACTGGG 1 cut(s) 1343
BmsI GCATC 8 cut(s) 202, 334, 494, 565, 634, 684, 772, 859
BmuI ACTGGG 1 cut(s) 1343
BpmI CTGGAG 5 cut(s) 150, 810, 957, 1061, 1320
Bpu10I CCTNAGC 1 cut(s) 1119
BpuEI CTTGAG 1 cut(s) 655
BsaHI GRCGYC 1 cut(s) 75
BsaJI CCNNGG 3 cut(s) 909, 957, 1176
BsaWI WCCGGW 2 cut(s) 1231, 1291
BsaXI ACNNNNNCTCC 2 cut(s) 148, 178
Bsc4I CCNNNNNNNGG 2 cut(s) 354, 377
Bse118I RCCGGY 1 cut(s) 1291
Bse1I ACTGG 6 cut(s) 91, 425, 450, 827, 1080, 1349
BseBI CCWGG 5 cut(s) 168, 1199, 1329, 1338, 1359
BseDI CCNNGG 3 cut(s) 909, 957, 1176
BseGI GGATG 5 cut(s) 405, 509, 580, 625, 787
BseLI CCNNNNNNNGG 2 cut(s) 354, 377
BseMII CTCAG 5 cut(s) 344, 354, 570, 1100, 1133
BseNI ACTGG 6 cut(s) 91, 425, 450, 827, 1080, 1349
BseRI GAGGAG 2 cut(s) 105, 112
BseXI GCAGC 3 cut(s) 30, 797, 1192
BsgI GTGCAG 2 cut(s) 226, 231
BshFI GGCC 5 cut(s) 90, 757, 923, 1063, 1112
BshNI GGYRCC 3 cut(s) 74, 455, 1078
BshTI ACCGGT 1 cut(s) 1291
BsiSI CCGG 2 cut(s) 1232, 1292
BslFI GGGAC 4 cut(s) 456, 967, 1265, 1321
BslI CCNNNNNNNGG 2 cut(s) 354, 377
BsmFI GGGAC 4 cut(s) 456, 967, 1265, 1321
BsnI GGCC 5 cut(s) 90, 757, 923, 1063, 1112
Bsp1407I TGTACA 1 cut(s) 49
Bsp143I GATC 6 cut(s) 416, 704, 831, 1133, 1156, 1164
Bsp19I CCATGG 1 cut(s) 1176
BspACI CCGC 2 cut(s) 111, 1246
BspANI GGCC 5 cut(s) 90, 757, 923, 1063, 1112
BspCNI CTCAG 5 cut(s) 343, 353, 571, 1099, 1132
BspHI TCATGA 1 cut(s) 469
BspLI GGNNCC 8 cut(s) 76, 369, 457, 742, 955, 1080, 1158, 1236
BspMI ACCTGC 1 cut(s) 248
BspPI GGATC 5 cut(s) 424, 712, 826, 1151, 1164
BspT107I GGYRCC 3 cut(s) 74, 455, 1078
BsrBI CCGCTC 1 cut(s) 113
BsrFI RCCGGY 1 cut(s) 1291
BsrGI TGTACA 1 cut(s) 49
BsrI ACTGG 6 cut(s) 91, 425, 450, 827, 1080, 1349
BssAI RCCGGY 1 cut(s) 1291
BssECI CCNNGG 3 cut(s) 909, 957, 1176
BssMI GATC 6 cut(s) 416, 704, 831, 1133, 1156, 1164
BssNI GRCGYC 1 cut(s) 75
BssSI CACGAG 1 cut(s) 809
BssT1I CCWWGG 2 cut(s) 957, 1176
Bst2BI CACGAG 1 cut(s) 809
Bst2UI CCWGG 5 cut(s) 168, 1199, 1329, 1338, 1359
Bst4CI ACNGT 3 cut(s) 273, 563, 932
BstACI GRCGYC 1 cut(s) 75
BstAUI TGTACA 1 cut(s) 49
BstC8I GCNNGC 1 cut(s) 360
BstDEI CTNAG 8 cut(s) 318, 330, 340, 408, 579, 1086, 1119, 1313
BstDSI CCRYGG 2 cut(s) 909, 1176
BstF5I GGATG 5 cut(s) 405, 509, 580, 625, 787
BstH2I RGCGCY 2 cut(s) 78, 1347
BstHHI GCGC 2 cut(s) 77, 1346
BstKTI GATC 6 cut(s) 419, 707, 834, 1136, 1159, 1167
BstMBI GATC 6 cut(s) 416, 704, 831, 1133, 1156, 1164
BstMWI GCNNNNNNNGC 6 cut(s) 43, 52, 782, 920, 1042, 1211
BstNI CCWGG 5 cut(s) 168, 1199, 1329, 1338, 1359
BstSCI CCNGG 5 cut(s) 166, 1197, 1327, 1336, 1357
BstSFI CTRYAG 1 cut(s) 1098
BstV1I GCAGC 3 cut(s) 30, 797, 1192
BstX2I RGATCY 3 cut(s) 416, 704, 1156
BstXI CCANNNNNNTGG 1 cut(s) 400
BstYI RGATCY 3 cut(s) 416, 704, 1156
BsuRI GGCC 5 cut(s) 90, 757, 923, 1063, 1112
BtgI CCRYGG 2 cut(s) 909, 1176
BtsCI GGATG 5 cut(s) 405, 509, 580, 625, 787
BtsI GCAGTG 1 cut(s) 243
BtsIMutI CAGTG 5 cut(s) 243, 269, 834, 1094, 1125
BveI ACCTGC 1 cut(s) 248
Cac8I GCNNGC 1 cut(s) 360
CciI TCATGA 1 cut(s) 469
CfoI GCGC 2 cut(s) 77, 1346
Cfr10I RCCGGY 1 cut(s) 1291
Cfr13I GGNCC 6 cut(s) 89, 368, 921, 954, 1110, 1331
CsiI ACCWGGT 1 cut(s) 1197
Csp6I GTAC 2 cut(s) 50, 1289
CspAI ACCGGT 1 cut(s) 1291
CspCI CAANNNNNGTGG 2 cut(s) 1134, 1169
CviAII CATG 7 cut(s) 470, 725, 737, 753, 1107, 1114, 1177
CviQI GTAC 2 cut(s) 50, 1289
DdeI CTNAG 8 cut(s) 318, 330, 340, 408, 579, 1086, 1119, 1313
DinI GGCGCC 1 cut(s) 76
DpnI GATC 6 cut(s) 418, 706, 833, 1135, 1158, 1166
DpnII GATC 6 cut(s) 416, 704, 831, 1133, 1156, 1164
DraIII CACNNNGTG 1 cut(s) 254
Eco130I CCWWGG 2 cut(s) 957, 1176
Eco147I AGGCCT 1 cut(s) 1063
Eco47I GGWCC 3 cut(s) 368, 954, 1331
EcoO109I RGGNCCY 1 cut(s) 954
EcoRII CCWGG 5 cut(s) 166, 1197, 1327, 1336, 1357
EcoT14I CCWWGG 2 cut(s) 957, 1176
EcoT22I ATGCAT 1 cut(s) 699
EgeI GGCGCC 1 cut(s) 76
EheI GGCGCC 1 cut(s) 76
ErhI CCWWGG 2 cut(s) 957, 1176
FaeI CATG 7 cut(s) 473, 728, 740, 756, 1110, 1117, 1180
FalI AAGNNNNNCTT 2 cut(s) 21, 53
FaqI GGGAC 4 cut(s) 456, 967, 1265, 1321
FatI CATG 7 cut(s) 469, 724, 736, 752, 1106, 1113, 1176
FbaI TGATCA 1 cut(s) 1164
Fnu4HI GCNGC 3 cut(s) 44, 786, 1206
FokI GGATG 5 cut(s) 412, 516, 587, 612, 794
Fsp4HI GCNGC 3 cut(s) 44, 786, 1206
FspBI CTAG 3 cut(s) 557, 797, 1052
GlaI GCGC 2 cut(s) 76, 1345
GluI GCNGC 3 cut(s) 44, 786, 1206
GsuI CTGGAG 5 cut(s) 150, 810, 957, 1061, 1320
HaeII RGCGCY 2 cut(s) 78, 1347
HaeIII GGCC 5 cut(s) 90, 757, 923, 1063, 1112
HapII CCGG 2 cut(s) 1232, 1292
HhaI GCGC 2 cut(s) 77, 1346
Hin1I GRCGYC 1 cut(s) 75
Hin1II CATG 7 cut(s) 473, 728, 740, 756, 1110, 1117, 1180
Hin6I GCGC 2 cut(s) 75, 1344
HinP1I GCGC 2 cut(s) 75, 1344
HindIII AAGCTT 4 cut(s) 5, 516, 887, 1139
HinfI GANTC 3 cut(s) 498, 668, 1172
HpaII CCGG 2 cut(s) 1232, 1292
HphI GGTGA 2 cut(s) 500, 677
Hpy166II GTNNAC 2 cut(s) 206, 685
Hpy188I TCNGA 5 cut(s) 333, 343, 503, 895, 1254
Hpy188III TCNNGA 6 cut(s) 470, 550, 572, 779, 974, 1040
Hpy8I GTNNAC 2 cut(s) 206, 685
HpyAV CCTTC 3 cut(s) 173, 346, 1053
HpyCH4III ACNGT 3 cut(s) 273, 563, 932
HpyF10VI GCNNNNNNNGC 6 cut(s) 43, 52, 782, 920, 1042, 1211
HpyF3I CTNAG 8 cut(s) 318, 330, 340, 408, 579, 1086, 1119, 1313
Hsp92I GRCGYC 1 cut(s) 75
Hsp92II CATG 7 cut(s) 473, 728, 740, 756, 1110, 1117, 1180
HspAI GCGC 2 cut(s) 75, 1344
KasI GGCGCC 1 cut(s) 74
Ksp22I TGATCA 1 cut(s) 1164
Kzo9I GATC 6 cut(s) 416, 704, 831, 1133, 1156, 1164
LmnI GCTCC 4 cut(s) 118, 976, 1042, 1297
Lsp1109I GCAGC 3 cut(s) 30, 797, 1192
LweI GCATC 8 cut(s) 202, 334, 494, 565, 634, 684, 772, 859
MabI ACCWGGT 1 cut(s) 1197
MaeI CTAG 3 cut(s) 557, 797, 1052
MaeIII GTNAC 5 cut(s) 235, 665, 1102, 1241, 1318
MalI GATC 6 cut(s) 418, 706, 833, 1135, 1158, 1166
MbiI CCGCTC 1 cut(s) 113
MboI GATC 6 cut(s) 416, 704, 831, 1133, 1156, 1164
MboII GAAGA 5 cut(s) 5, 8, 11, 188, 1068
MfeI CAATTG 2 cut(s) 138, 719
MflI RGATCY 3 cut(s) 416, 704, 1156
Mly113I GGCGCC 1 cut(s) 75
MlyI GAGTC 1 cut(s) 662
MmeI TCCRAC 1 cut(s) 504
Mph1103I ATGCAT 1 cut(s) 699
MseI TTAA 2 cut(s) 660, 749
MslI CAYNNNNRTG 3 cut(s) 274, 398, 735
MspI CCGG 2 cut(s) 1232, 1292
MspR9I CCNGG 5 cut(s) 168, 1199, 1329, 1338, 1359
MunI CAATTG 2 cut(s) 138, 719
MvaI CCWGG 5 cut(s) 168, 1199, 1329, 1338, 1359
MwoI GCNNNNNNNGC 6 cut(s) 43, 52, 782, 920, 1042, 1211
NarI GGCGCC 1 cut(s) 75
NcoI CCATGG 1 cut(s) 1176
NdeII GATC 6 cut(s) 416, 704, 831, 1133, 1156, 1164
NlaIII CATG 7 cut(s) 473, 728, 740, 756, 1110, 1117, 1180
NlaIV GGNNCC 8 cut(s) 76, 369, 457, 742, 955, 1080, 1158, 1236
NmeAIII GCCGAG 1 cut(s) 373
NmuCI GTSAC 2 cut(s) 665, 1102
NsiI ATGCAT 1 cut(s) 699
OliI CACNNNNGTG 1 cut(s) 274
PagI TCATGA 1 cut(s) 469
PceI AGGCCT 1 cut(s) 1063
PfeI GAWTC 2 cut(s) 498, 1172
PfoI TCCNGGA 2 cut(s) 166, 1336
PinAI ACCGGT 1 cut(s) 1291
PkrI GCNGC 3 cut(s) 45, 787, 1207
PleI GAGTC 1 cut(s) 662
PluTI GGCGCC 1 cut(s) 78
PpsI GAGTC 1 cut(s) 662
PpuMI RGGWCCY 1 cut(s) 954
PshBI ATTAAT 1 cut(s) 660
PsiI TTATAA 1 cut(s) 513
Psp5II RGGWCCY 1 cut(s) 954
Psp6I CCWGG 5 cut(s) 166, 1197, 1327, 1336, 1357
PspGI CCWGG 5 cut(s) 166, 1197, 1327, 1336, 1357
PspN4I GGNNCC 8 cut(s) 76, 369, 457, 742, 955, 1080, 1158, 1236
PspPI GGNCC 6 cut(s) 89, 368, 921, 954, 1110, 1331
PspPPI RGGWCCY 1 cut(s) 954
PsuI RGATCY 3 cut(s) 416, 704, 1156
RsaI GTAC 2 cut(s) 51, 1290
RsaNI GTAC 2 cut(s) 50, 1289
RseI CAYNNNNRTG 3 cut(s) 274, 398, 735
SaqAI TTAA 2 cut(s) 660, 749
SatI GCNGC 3 cut(s) 44, 786, 1206
Sau3AI GATC 6 cut(s) 416, 704, 831, 1133, 1156, 1164
Sau96I GGNCC 6 cut(s) 89, 368, 921, 954, 1110, 1331
SchI GAGTC 1 cut(s) 662
ScrFI CCNGG 5 cut(s) 168, 1199, 1329, 1338, 1359
SexAI ACCWGGT 1 cut(s) 1197
SfaNI GCATC 8 cut(s) 202, 334, 494, 565, 634, 684, 772, 859
SfcI CTRYAG 1 cut(s) 1098
SfoI GGCGCC 1 cut(s) 76
SinI GGWCC 3 cut(s) 368, 954, 1331
SmiMI CAYNNNNRTG 3 cut(s) 274, 398, 735
SmlI CTYRAG 1 cut(s) 670
SmoI CTYRAG 1 cut(s) 670
SseBI AGGCCT 1 cut(s) 1063
SsiI CCGC 2 cut(s) 111, 1246
SspDI GGCGCC 1 cut(s) 74
SspI AATATT 2 cut(s) 481, 859
SspMI CTAG 3 cut(s) 557, 797, 1052
StuI AGGCCT 1 cut(s) 1063
StyD4I CCNGG 5 cut(s) 166, 1197, 1327, 1336, 1357
StyI CCWWGG 2 cut(s) 957, 1176
TaaI ACNGT 3 cut(s) 273, 563, 932
TatI WGTACW 1 cut(s) 49
TfiI GAWTC 2 cut(s) 498, 1172
Tru1I TTAA 2 cut(s) 660, 749
Tru9I TTAA 2 cut(s) 660, 749
TscAI CASTG 5 cut(s) 250, 276, 834, 1094, 1132
TseFI GTSAC 2 cut(s) 665, 1102
TseI GCWGC 3 cut(s) 43, 785, 1205
Tsp45I GTSAC 2 cut(s) 665, 1102
TspDTI ATGAA 6 cut(s) 17, 135, 458, 486, 667, 782
TspGWI ACGGA 2 cut(s) 733, 1016
TspRI CASTG 5 cut(s) 250, 276, 834, 1094, 1132
VpaK11BI GGWCC 3 cut(s) 368, 954, 1331
VspI ATTAAT 1 cut(s) 660
XapI RAATTY 3 cut(s) 299, 383, 618
XspI CTAG 3 cut(s) 557, 797, 1052
Zsp2I ATGCAT 1 cut(s) 699
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.