RLG00000011626

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
11128385 .. 11131511
3127 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011626

Sequence Viewer

Length: 1389 bp
ATGAAGCTTGTTTTTGTTGTTGTTGTTGTTGTAAATTTTGTTGCTTTTGTGCCTGTAGACCAAAACAAGCCATGCCCTTTTTGTGTTGGAGCCACAGTTGTACCTGACCCGCTTGTTTCTTCCATGTCTGCTCCTCTTCCCCCACCAAGCTTCTCACCCACTTCCCCAATTGCTTCATCAATGGCTTCCTTCTCTCCAGGAATTCAACAAGGAAGTGAAGAGAATCAAACGGATCCGCATAAGAAACCGCTCATTGCCCTGATTGTGACTTGTGCAACACTTGGTGCAGTTTTGTTGTCACTATTGTGTTTGTGGTTTTATCACAGGAAGTACAAGTTCCTTAAGAGAAATGCTCAGAGCTCAGATGCCGAGAAGGAGCTGGCATTGTCTCCATTTTTCGGTAAATTCAATTCCATAAAGATGGTTGGAAACAAAGGGTCTGTGACAGTAATTGAGTATAAGCTAATAGAAAAGGGCACTAGCAATTTTCGGGAGAGTAATATCTTGGGCGAGGGTGGATTTGGATGCGTTTACCGGGCTCGTTTGGATGATAGTTTGATTGTTGCTGTCAAGAAACTGGACTGTGCAACTGAGGATGCTGAAAAAGAATTTGAGAATGAGGTGGAGTTATTACATAAAATTCAGCATCCGAATATAATTTCTTTTTTGGGCTGTAGTATTGATGGTGACTCAAGGTTCATTGTTTATGAATTGATGCATAATGGTTCTGTGGAAACTCAATTGCATGGACCCTCTCATGGATCGGCATTAACATGGCCTATGCGAATGAAAATTGCTCTGGATGCTGCAAGAGGATTAGAGTATTTGCATGAGTACTGCAACCCTCCAGTGATCCATAGAGATCTGAAAACATCTAATATTCTTTTGGATGCCAACTTCAATGCCAAGCTCTCTGATTTTGGTCTTGCTGTGGCTGATGGGGCCAAAAACAATAATAACATCAAGCTTTCTGGCACCTTGGGTTATGTTGCTCCCGAGTATCTTTTGGATGGTAAGTTGACGGACAAGAGTGATGTCTATGCTTTTGGAGTTGTACTTTTGGAGCTTCTACTAGGAAGAAGGCCTGTAGAAAAACTGGCACCAGCTCAATGCCAATCCTTAGTCACATGGGCCATGCCTCAGCTTACTGACCGATCAAAGCTTCCCCACATTGTGGATCCCATGATCAAAGATACAATGGATCTGAAGCACTTGTACCAGGTTGCTGCTGTAGCTGTGTTATGTGTGCAACCCGAACCAAGTTACCGCCCACTAATAACAGATGTTTTGCATTCTCTTGTCCCTCTTGTTCCTGTCGAGCTCGGAGGGACACTTAGAGTTACACAACCTGCACCTCCAGGAAACCCCCAAGAGTCTTCTGATCACTGA

Protein Analysis

463

Amino Acids

50.54

Weight (kDa)

6.12

Isoelectric Point (pI)

41.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 164 - 378 1.1e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 167 - 398 3.3e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1357
AccB1I GGYRCC 2 cut(s) 974, 1099
AccB7I CCANNNNNTGG 1 cut(s) 1174
AccBSI CCGCTC 1 cut(s) 250
AccI GTMKAC 1 cut(s) 57
AciI CCGC 4 cut(s) 110, 236, 248, 1267
AclWI GGATC 7 cut(s) 227, 240, 769, 847, 1172, 1185, 1209
AcsI RAATTY 5 cut(s) 34, 201, 404, 608, 639
AcuI CTGAAG 1 cut(s) 1226
AdeI CACNNNGTG 2 cut(s) 284, 1174
AfaI GTAC 5 cut(s) 102, 332, 836, 1056, 1217
AfiI CCNNNNNNNGG 3 cut(s) 398, 758, 1174
AflII CTTAAG 1 cut(s) 341
AgsI TTSAA 3 cut(s) 206, 409, 901
AjnI CCWGG 3 cut(s) 196, 1218, 1357
AleI CACNNNNGTG 1 cut(s) 304
Alw21I GWGCWC 2 cut(s) 362, 1323
Alw26I GTCTC 1 cut(s) 393
AlwI GGATC 7 cut(s) 227, 240, 769, 847, 1172, 1185, 1209
Ama87I CYCGRG 1 cut(s) 995
AoxI GGCC 4 cut(s) 776, 942, 1082, 1131
ApeKI GCWGC 2 cut(s) 806, 1226
ApoI RAATTY 5 cut(s) 34, 201, 404, 608, 639
AspS9I GGNCC 3 cut(s) 749, 942, 1131
AsuC2I CCSGG 1 cut(s) 536
AsuHPI GGTGA 2 cut(s) 147, 698
AvaI CYCGRG 1 cut(s) 995
AvaII GGWCC 1 cut(s) 749
BaeGI GKGCMC 1 cut(s) 479
BaeI ACNNNNGTAYC 2 cut(s) 84, 117
BamHI GGATCC 2 cut(s) 232, 1177
BanI GGYRCC 2 cut(s) 974, 1099
BanII GRGCYC 3 cut(s) 362, 541, 1323
BarI GAAGNNNNNNTAC 2 cut(s) 1199, 1231
BbsI GAAGAC 1 cut(s) 1368
Bbv12I GWGCWC 2 cut(s) 362, 1323
BbvCI CCTCAGC 1 cut(s) 1140
BbvI GCAGC 2 cut(s) 793, 1213
BccI CCATC 4 cut(s) 415, 677, 932, 1004
BciT130I CCWGG 3 cut(s) 198, 1220, 1359
BclI TGATCA 2 cut(s) 1185, 1381
BcnI CCSGG 1 cut(s) 536
BcoDI GTCTC 1 cut(s) 393
BfaI CTAG 2 cut(s) 480, 1073
BfmI CTRYAG 4 cut(s) 54, 673, 1086, 1230
BfrI CTTAAG 1 cut(s) 341
BfuAI ACCTGC 1 cut(s) 1357
BglII AGATCT 1 cut(s) 862
BisI GCNGC 2 cut(s) 807, 1227
BlsI GCNGC 2 cut(s) 808, 1228
BmcAI AGTACT 1 cut(s) 836
Bme1390I CCNGG 4 cut(s) 198, 536, 1220, 1359
Bme18I GGWCC 1 cut(s) 749
BmeT110I CYCGRG 1 cut(s) 995
BmgT120I GGNCC 3 cut(s) 749, 942, 1131
BmiI GGNNCC 7 cut(s) 91, 234, 751, 943, 976, 1101, 1179
BmrFI CCNGG 4 cut(s) 198, 536, 1220, 1359
BmsI GCATC 7 cut(s) 355, 515, 586, 655, 705, 793, 880
BpiI GAAGAC 1 cut(s) 1368
BplI GAGNNNNNCTC 2 cut(s) 337, 369
BpmI CTGGAG 3 cut(s) 180, 831, 1341
Bpu10I CCTNAGC 1 cut(s) 1140
BpuEI CTTGAG 1 cut(s) 676
BpuMI CCSGG 1 cut(s) 536
BsaJI CCNNGG 1 cut(s) 978
BsaXI ACNNNNNCTCC 2 cut(s) 81, 111
Bsc4I CCNNNNNNNGG 3 cut(s) 398, 758, 1174
Bse1I ACTGG 3 cut(s) 582, 848, 1101
Bse3DI GCAATG 1 cut(s) 252
BseBI CCWGG 3 cut(s) 198, 1220, 1359
BseDI CCNNGG 1 cut(s) 978
BseGI GGATG 7 cut(s) 530, 553, 601, 646, 808, 895, 1015
BseLI CCNNNNNNNGG 3 cut(s) 398, 758, 1174
BseMI GCAATG 1 cut(s) 252
BseMII CTCAG 4 cut(s) 368, 375, 582, 1154
BseNI ACTGG 3 cut(s) 582, 848, 1101
BseRI GAGGAG 1 cut(s) 123
BseSI GKGCMC 1 cut(s) 479
BseXI GCAGC 2 cut(s) 793, 1213
BsgI GTGCAG 2 cut(s) 306, 1335
BshFI GGCC 4 cut(s) 778, 944, 1084, 1133
BshNI GGYRCC 2 cut(s) 974, 1099
BsiHKAI GWGCWC 2 cut(s) 362, 1323
BsiHKCI CYCGRG 1 cut(s) 995
BsiSI CCGG 1 cut(s) 535
BslFI GGGAC 2 cut(s) 1286, 1342
BslI CCNNNNNNNGG 3 cut(s) 398, 758, 1174
BsmAI GTCTC 1 cut(s) 393
BsmFI GGGAC 2 cut(s) 1286, 1342
BsmI GAATGC 1 cut(s) 1291
BsnI GGCC 4 cut(s) 778, 944, 1084, 1133
BsoBI CYCGRG 1 cut(s) 995
Bsp1286I GDGCHC 4 cut(s) 362, 479, 541, 1323
Bsp143I GATC 9 cut(s) 232, 761, 852, 862, 1154, 1177, 1185, 1201, 1381
BspACI CCGC 4 cut(s) 110, 236, 248, 1267
BspANI GGCC 4 cut(s) 778, 944, 1084, 1133
BspCNI CTCAG 4 cut(s) 367, 374, 583, 1153
BspLI GGNNCC 7 cut(s) 91, 234, 751, 943, 976, 1101, 1179
BspMI ACCTGC 1 cut(s) 1357
BspPI GGATC 7 cut(s) 227, 240, 769, 847, 1172, 1185, 1209
BspT107I GGYRCC 2 cut(s) 974, 1099
BspTI CTTAAG 1 cut(s) 341
BsrBI CCGCTC 1 cut(s) 250
BsrDI GCAATG 1 cut(s) 252
BsrI ACTGG 3 cut(s) 582, 848, 1101
BssECI CCNNGG 1 cut(s) 978
BssMI GATC 9 cut(s) 232, 761, 852, 862, 1154, 1177, 1185, 1201, 1381
BssT1I CCWWGG 1 cut(s) 978
Bst2UI CCWGG 3 cut(s) 198, 1220, 1359
Bst4CI ACNGT 3 cut(s) 97, 448, 584
Bst6I CTCTTC 2 cut(s) 141, 213
BstAFI CTTAAG 1 cut(s) 341
BstC8I GCNNGC 1 cut(s) 381
BstDEI CTNAG 6 cut(s) 354, 361, 591, 1120, 1140, 1334
BstF5I GGATG 7 cut(s) 530, 553, 601, 646, 808, 895, 1015
BstKTI GATC 9 cut(s) 235, 764, 855, 865, 1157, 1180, 1188, 1204, 1384
BstMAI GTCTC 1 cut(s) 393
BstMBI GATC 9 cut(s) 232, 761, 852, 862, 1154, 1177, 1185, 1201, 1381
BstMWI GCNNNNNNNGC 3 cut(s) 803, 941, 1232
BstNI CCWGG 3 cut(s) 198, 1220, 1359
BstSCI CCNGG 4 cut(s) 196, 534, 1218, 1357
BstSFI CTRYAG 4 cut(s) 54, 673, 1086, 1230
BstSLI GKGCMC 1 cut(s) 479
BstV1I GCAGC 2 cut(s) 793, 1213
BstV2I GAAGAC 1 cut(s) 1368
BstX2I RGATCY 4 cut(s) 232, 862, 1177, 1201
BstXI CCANNNNNNTGG 1 cut(s) 421
BstYI RGATCY 4 cut(s) 232, 862, 1177, 1201
BsuRI GGCC 4 cut(s) 778, 944, 1084, 1133
BtsCI GGATG 7 cut(s) 530, 553, 601, 646, 808, 895, 1015
BtsIMutI CAGTG 2 cut(s) 855, 1384
BveI ACCTGC 1 cut(s) 1357
Cac8I GCNNGC 1 cut(s) 381
Cfr13I GGNCC 3 cut(s) 749, 942, 1131
CsiI ACCWGGT 1 cut(s) 1218
Csp6I GTAC 5 cut(s) 101, 331, 835, 1055, 1216
CviAII CATG 9 cut(s) 72, 124, 746, 758, 774, 830, 1128, 1135, 1183
CviQI GTAC 5 cut(s) 101, 331, 835, 1055, 1216
DdeI CTNAG 6 cut(s) 354, 361, 591, 1120, 1140, 1334
DpnI GATC 9 cut(s) 234, 763, 854, 864, 1156, 1179, 1187, 1203, 1383
DpnII GATC 9 cut(s) 232, 761, 852, 862, 1154, 1177, 1185, 1201, 1381
DraIII CACNNNGTG 2 cut(s) 284, 1174
Eam1104I CTCTTC 2 cut(s) 141, 213
EarI CTCTTC 2 cut(s) 141, 213
Ecl136II GAGCTC 2 cut(s) 360, 1321
Eco130I CCWWGG 1 cut(s) 978
Eco147I AGGCCT 1 cut(s) 1084
Eco24I GRGCYC 3 cut(s) 362, 541, 1323
Eco47I GGWCC 1 cut(s) 749
Eco53kI GAGCTC 2 cut(s) 360, 1321
Eco57I CTGAAG 1 cut(s) 1226
Eco88I CYCGRG 1 cut(s) 995
EcoICRI GAGCTC 2 cut(s) 360, 1321
EcoRI GAATTC 1 cut(s) 201
EcoRII CCWGG 3 cut(s) 196, 1218, 1357
EcoT14I CCWWGG 1 cut(s) 978
EcoT22I ATGCAT 1 cut(s) 720
EcoT38I GRGCYC 3 cut(s) 362, 541, 1323
ErhI CCWWGG 1 cut(s) 978
FaeI CATG 9 cut(s) 75, 127, 749, 761, 777, 833, 1131, 1138, 1186
FaqI GGGAC 2 cut(s) 1286, 1342
FatI CATG 9 cut(s) 71, 123, 745, 757, 773, 829, 1127, 1134, 1182
FauI CCCGC 1 cut(s) 117
FbaI TGATCA 2 cut(s) 1185, 1381
FblI GTMKAC 1 cut(s) 57
Fnu4HI GCNGC 2 cut(s) 807, 1227
FokI GGATG 7 cut(s) 537, 560, 608, 633, 815, 902, 1022
FriOI GRGCYC 3 cut(s) 362, 541, 1323
Fsp4HI GCNGC 2 cut(s) 807, 1227
FspBI CTAG 2 cut(s) 480, 1073
GluI GCNGC 2 cut(s) 807, 1227
GsuI CTGGAG 3 cut(s) 180, 831, 1341
HaeIII GGCC 4 cut(s) 778, 944, 1084, 1133
HapII CCGG 1 cut(s) 535
Hin1II CATG 9 cut(s) 75, 127, 749, 761, 777, 833, 1131, 1138, 1186
HincII GTYRAC 1 cut(s) 1020
HindII GTYRAC 1 cut(s) 1020
HindIII AAGCTT 4 cut(s) 5, 148, 965, 1160
HinfI GANTC 3 cut(s) 223, 689, 1373
HpaII CCGG 1 cut(s) 535
HphI GGTGA 2 cut(s) 147, 698
Hpy166II GTNNAC 3 cut(s) 58, 532, 1020
Hpy188I TCNGA 8 cut(s) 357, 364, 651, 867, 916, 1206, 1325, 1381
Hpy188III TCNNGA 4 cut(s) 491, 571, 800, 995
Hpy8I GTNNAC 3 cut(s) 58, 532, 1020
HpyAV CCTTC 3 cut(s) 199, 367, 1074
HpyCH4III ACNGT 3 cut(s) 97, 448, 584
HpyF10VI GCNNNNNNNGC 3 cut(s) 803, 941, 1232
HpyF3I CTNAG 6 cut(s) 354, 361, 591, 1120, 1140, 1334
Hsp92II CATG 9 cut(s) 75, 127, 749, 761, 777, 833, 1131, 1138, 1186
Ksp22I TGATCA 2 cut(s) 1185, 1381
Kzo9I GATC 9 cut(s) 232, 761, 852, 862, 1154, 1177, 1185, 1201, 1381
LmnI GCTCC 5 cut(s) 89, 136, 376, 997, 1063
Lsp1109I GCAGC 2 cut(s) 793, 1213
LweI GCATC 7 cut(s) 355, 515, 586, 655, 705, 793, 880
MabI ACCWGGT 1 cut(s) 1218
MaeI CTAG 2 cut(s) 480, 1073
MaeIII GTNAC 7 cut(s) 265, 297, 442, 686, 1123, 1262, 1339
MalI GATC 9 cut(s) 234, 763, 854, 864, 1156, 1179, 1187, 1203, 1383
MbiI CCGCTC 1 cut(s) 250
MboI GATC 9 cut(s) 232, 761, 852, 862, 1154, 1177, 1185, 1201, 1381
MboII GAAGA 5 cut(s) 111, 128, 230, 1089, 1368
MfeI CAATTG 2 cut(s) 168, 740
MflI RGATCY 4 cut(s) 232, 862, 1177, 1201
MhlI GDGCHC 4 cut(s) 362, 479, 541, 1323
MlyI GAGTC 2 cut(s) 683, 1382
MmeI TCCRAC 2 cut(s) 67, 406
Mph1103I ATGCAT 1 cut(s) 720
MseI TTAA 2 cut(s) 342, 770
MslI CAYNNNNRTG 3 cut(s) 304, 419, 772
MspCI CTTAAG 1 cut(s) 341
MspI CCGG 1 cut(s) 535
MspR9I CCNGG 4 cut(s) 198, 536, 1220, 1359
MunI CAATTG 2 cut(s) 168, 740
Mva1269I GAATGC 1 cut(s) 1291
MvaI CCWGG 3 cut(s) 198, 1220, 1359
MwoI GCNNNNNNNGC 3 cut(s) 803, 941, 1232
NciI CCSGG 1 cut(s) 536
NdeII GATC 9 cut(s) 232, 761, 852, 862, 1154, 1177, 1185, 1201, 1381
NlaIII CATG 9 cut(s) 75, 127, 749, 761, 777, 833, 1131, 1138, 1186
NlaIV GGNNCC 7 cut(s) 91, 234, 751, 943, 976, 1101, 1179
NmeAIII GCCGAG 1 cut(s) 394
NmuCI GTSAC 5 cut(s) 265, 297, 442, 686, 1123
NsiI ATGCAT 1 cut(s) 720
OliI CACNNNNGTG 1 cut(s) 304
PceI AGGCCT 1 cut(s) 1084
PctI GAATGC 1 cut(s) 1291
PfeI GAWTC 1 cut(s) 223
PflMI CCANNNNNTGG 1 cut(s) 1174
PfoI TCCNGGA 2 cut(s) 196, 1357
PkrI GCNGC 2 cut(s) 808, 1228
PleI GAGTC 2 cut(s) 683, 1381
PpsI GAGTC 2 cut(s) 683, 1381
Psp124BI GAGCTC 2 cut(s) 362, 1323
Psp6I CCWGG 3 cut(s) 196, 1218, 1357
PspGI CCWGG 3 cut(s) 196, 1218, 1357
PspN4I GGNNCC 7 cut(s) 91, 234, 751, 943, 976, 1101, 1179
PspPI GGNCC 3 cut(s) 749, 942, 1131
PsuI RGATCY 4 cut(s) 232, 862, 1177, 1201
RsaI GTAC 5 cut(s) 102, 332, 836, 1056, 1217
RsaNI GTAC 5 cut(s) 101, 331, 835, 1055, 1216
RseI CAYNNNNRTG 3 cut(s) 304, 419, 772
SacI GAGCTC 2 cut(s) 362, 1323
SaqAI TTAA 2 cut(s) 342, 770
SatI GCNGC 2 cut(s) 807, 1227
Sau3AI GATC 9 cut(s) 232, 761, 852, 862, 1154, 1177, 1185, 1201, 1381
Sau96I GGNCC 3 cut(s) 749, 942, 1131
ScaI AGTACT 1 cut(s) 836
SchI GAGTC 2 cut(s) 683, 1382
ScrFI CCNGG 4 cut(s) 198, 536, 1220, 1359
SduI GDGCHC 4 cut(s) 362, 479, 541, 1323
SexAI ACCWGGT 1 cut(s) 1218
SfaNI GCATC 7 cut(s) 355, 515, 586, 655, 705, 793, 880
SfcI CTRYAG 4 cut(s) 54, 673, 1086, 1230
SinI GGWCC 1 cut(s) 749
SmiMI CAYNNNNRTG 3 cut(s) 304, 419, 772
SmlI CTYRAG 2 cut(s) 341, 691
SmoI CTYRAG 2 cut(s) 341, 691
SseBI AGGCCT 1 cut(s) 1084
SsiI CCGC 4 cut(s) 110, 236, 248, 1267
SspI AATATT 1 cut(s) 880
SspMI CTAG 2 cut(s) 480, 1073
SstI GAGCTC 2 cut(s) 362, 1323
StuI AGGCCT 1 cut(s) 1084
StyD4I CCNGG 4 cut(s) 196, 534, 1218, 1357
StyI CCWWGG 1 cut(s) 978
TaaI ACNGT 3 cut(s) 97, 448, 584
TaqI TCGA 1 cut(s) 1317
TaqII GACCGA 1 cut(s) 1167
TatI WGTACW 3 cut(s) 330, 834, 1054
TfiI GAWTC 1 cut(s) 223
Tru1I TTAA 2 cut(s) 342, 770
Tru9I TTAA 2 cut(s) 342, 770
TscAI CASTG 1 cut(s) 855
TseFI GTSAC 5 cut(s) 265, 297, 442, 686, 1123
TseI GCWGC 2 cut(s) 806, 1226
Tsp45I GTSAC 5 cut(s) 265, 297, 442, 686, 1123
TspDTI ATGAA 5 cut(s) 17, 165, 688, 723, 803
TspGWI ACGGA 2 cut(s) 245, 1037
TspRI CASTG 1 cut(s) 855
Van91I CCANNNNNTGG 1 cut(s) 1174
Vha464I CTTAAG 1 cut(s) 341
VpaK11BI GGWCC 1 cut(s) 749
XapI RAATTY 5 cut(s) 34, 201, 404, 608, 639
XmiI GTMKAC 1 cut(s) 57
XspI CTAG 2 cut(s) 480, 1073
ZrmI AGTACT 1 cut(s) 836
Zsp2I ATGCAT 1 cut(s) 720
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.