FvH4_2g32110

Far upstream element-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0009579
Physical Location & Seq
Reverse (-)
24430643 .. 24436073
5431 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g32110.t1

Sequence Viewer

Length: 2061 bp
ATGGCCGACGAAGCTCAATACTCCTCCGGCCCCGATTCCGGCGGCAATAAGCGAAAATACGAGGAGCCTACTACCCGCCGTGTCACCGGCTTCTCAGCCCCCATCCTCCCTTCCTCATCGCCCGACTCTGTGCCGACGTCCTACAGCAGCGTCCCTCCCCCCGTCGACGACATCCAGCTGGCCAAGCAGCGCGCCCAGGAGATTGCTGCTCGCTTGTACAACAACGCCAGTAGCGGCGTCGCCGCCGCCGCCGGACTCGAAACCAAGCGCCCTAGAGTTGACAACGGCGGCGGCTACGATTCCGGTGACAGAGGCTTCAGCTCCATTCCATCTGATGCCAAGCCTTACTCAGCTCCATCGTCGATTCCAGTTTCGTATGGATTCCAAGGAGGGAGCAAGAAGATTGCGGTTCCGAATGGCAGGGTTGGTGTTATTATTGGTAAACAGGGAGAGACTATTAAGTATCTTCAGGCTCAGTCAGGAGGAGCCAAGATTCAGGTTACTCGAGATGCGGATGCCGACCTCAACTGTCCTACTAGGGAGGTGGAGATCATGGGAACTCCAGAGCAGATCTCAAAAGCTGAGCATTTGATAAATGAAGTTCTTGCTGAGGCTGAATCAGGTGGTCCTGCTGTAGTTTCTCGAAGATCAACTGGACAAGCAGGAGCTGAAACATTTGTAATGAAAATTCCTAACAACAAGGTTGGTCTTGTAATTGGTAAACGAGGGGAAACTATTAAAAATATGCAAGCTAGTACTGCTGCTCGTATCCAGGTGATTCCTTTGCATCTTCCCCCCGGTGACACCTCAATCGAAAGGACAGTACAAATTGATGGAACTAGTGAACAAATTGAAGCTGCCAAACAGTTGGTGAATGAAGTTATTAGCGAGAACCGTGCTAGAAACCCAGCAATGGGTGGAGGATATTCACAGCAAGGTTATCAAACACGTCCTCCCACTGGCTGGGCTCCTAGTGGTCCTCCAATGCAACAACCTGGTTATGGATATGGACAGTCTGGAGCATATTCTGGTGCAACACCTCAATATAATGCATCTCAGCCTTCTTATCCTGGCTATCCTCCTCAACCTGCATCTGGTGGATATCCCACCAATTGGGATCAGTCAGCTGCTGCACCAACTCAGCAGACCTCTCAGGGAGGTAGTTATGATTACTATTCCCAACAACCCTCACACCAGCAGCAAAACCCTGGTGGTTCTGCTGCGCCAGCGGATAATGCTAGCTACAATTATGGCCAGCCGCCTATTTCAGGCTATAATCAGCAAGGACAAGGTTATTCTCAAGATGGCTATGGTGGATATCAGGCACCACCTCAATCTGGGTATGGCCAGCCACCAGCATATGATCAACATGGTTATCCTGCAGCCAACTATGGTAATGTGAGCAACCCAGCTCCAGATACTTCCTCTTATGGATCTCAGGGGGAATCAGCCCAAGCACCTCCTGTGCAGCCTGCTCCAGGGGGCCAGCAAGCATACACTGCCAATCAACAGCCTAGCCCAAACCCTGCAAGTTACCCGCCCCAAGTGCCTTCTCAGCCAGGTTATGGAATGCCCCCAACTTCTCAAACTGGTTATGGGACTCAACCACCTGCTCAATCTGCATATGGGCCTGGATATGGAGCACCACCTCAAGCACAAAAGCCTCCTGCTCAGTCACCCACCACTCCCGGTAGCTATGGTCAACCACCAGCTGTGCATCCAGGTTATCCCCATTCTCAGCCTCCACCTTCCGGATATGCTCAGCCTGATTCTGGTGCACGTGTCCCACCATCCAGTTATGGTTCTACAGCAGCTCAGGCAGGCTATGGTGGCCCCCCAGCGTATGGTGCACCGCCGTCTGGTCAGCCAGGTTATGGGCAGGCACCACCCTACAATACATCTTATGGGGCTGCAGGATACACACAGCCTCCTGCATATTCTGCTGAAGGAGCGAATGGAAACACTCGTGGTGGGGCATATGATGCTGCTGGTGCTGGTGCTCCTCCTGCTTCACAGACTGCTCAGCCAAGTGGAGTTGCCAAGACTTCCCCACAGAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001505 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006417 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010033 GO:0010468 GO:0010494 GO:0010556 GO:0010558 GO:0010586 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010984 GO:0010985 GO:0010988 GO:0010989 GO:0016070 GO:0016071 GO:0017091 GO:0017148 GO:0019219 GO:0019222 GO:0019439 GO:0030425 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032991 GO:0034097 GO:0034248 GO:0034249 GO:0034641 GO:0034655 GO:0034660 GO:0035770 GO:0035925 GO:0036464 GO:0036477 GO:0042221 GO:0042995 GO:0043005 GO:0043025 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043487 GO:0043488 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044297 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044463 GO:0044464 GO:0045019 GO:0045428 GO:0045935 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050779 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0061013 GO:0061014 GO:0061157 GO:0061158 GO:0065007 GO:0065008 GO:0070013 GO:0070887 GO:0071310 GO:0071345 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097447 GO:0097458 GO:0120025 GO:0120038 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1903311 GO:1903313 GO:1903426 GO:1903427 GO:1904406 GO:1990904 GO:2000112 GO:2000113 GO:2000377 GO:2000378 GO:2000628
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KH_1

Protein Analysis

687

Amino Acids

70.41

Weight (kDa)

5.78

Isoelectric Point (pI)

56.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KH_1 PF00013 133 - 200 4.4e-18 KH domain
KH_1 PF00013 225 - 293 1.2e-17 KH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1618
AatII GACGTC 1 cut(s) 140
Acc36I ACCTGC 2 cut(s) 1096, 1618
AccB1I GGYRCC 2 cut(s) 1324, 1882
AccB7I CCANNNNNTGG 5 cut(s) 963, 1113, 1565, 1844, 1874
AccI GTMKAC 1 cut(s) 165
AccII CGCG 1 cut(s) 192
AccIII TCCGGA 1 cut(s) 1751
AclWI GGATC 2 cut(s) 1125, 1441
AcoI YGGCCR 4 cut(s) 3, 180, 1252, 1345
AcsI RAATTY 1 cut(s) 687
AcuI CTGAAG 3 cut(s) 301, 452, 1965
AcvI CACGTG 1 cut(s) 1781
AcyI GRCGYC 2 cut(s) 137, 237
AfaI GTAC 3 cut(s) 218, 757, 825
AflIII ACRYGT 2 cut(s) 947, 1780
AgsI TTSAA 1 cut(s) 854
AhlI ACTAGT 1 cut(s) 839
AjiI CACGTC 1 cut(s) 950
Alw21I GWGCWC 4 cut(s) 1645, 1780, 1852, 2002
Alw26I GTCTC 1 cut(s) 446
Alw44I GTGCAC 2 cut(s) 1776, 1848
AlwI GGATC 2 cut(s) 1125, 1441
AlwNI CAGNNNCTG 2 cut(s) 668, 1130
Ama87I CYCGRG 1 cut(s) 504
Aor13HI TCCGGA 1 cut(s) 1751
AoxI GGCC 8 cut(s) 3, 28, 180, 1252, 1345, 1483, 1628, 1831
ApaLI GTGCAC 2 cut(s) 1776, 1848
ApoI RAATTY 1 cut(s) 687
AspLEI GCGC 4 cut(s) 192, 194, 270, 1225
AspS9I GGNCC 6 cut(s) 29, 626, 977, 1483, 1628, 1832
AsuC2I CCSGG 2 cut(s) 798, 1689
AsuHPI GGTGA 6 cut(s) 76, 317, 787, 812, 883, 1668
AsuNHI GCTAGC 1 cut(s) 1238
AvaI CYCGRG 1 cut(s) 504
AvaII GGWCC 2 cut(s) 626, 977
BaeGI GKGCMC 2 cut(s) 1780, 1852
BalI TGGCCA 3 cut(s) 182, 1254, 1347
BanI GGYRCC 2 cut(s) 1324, 1882
BanII GRGCYC 1 cut(s) 970
BauI CACGAG 1 cut(s) 1965
BbrPI CACGTG 1 cut(s) 1781
Bbv12I GWGCWC 4 cut(s) 1645, 1780, 1852, 2002
BbvCI CCTCAGC 1 cut(s) 609
BccI CCATC 6 cut(s) 110, 337, 364, 827, 1298, 1798
BceAI ACGGC 3 cut(s) 63, 301, 1840
BcgI CGANNNNNNTGC 2 cut(s) 878, 912
BciVI GTATCC 2 cut(s) 779, 1910
BclI TGATCA 1 cut(s) 1363
BcnI CCSGG 2 cut(s) 798, 1689
BcoDI GTCTC 1 cut(s) 446
BcuI ACTAGT 1 cut(s) 839
BfaI CTAG 8 cut(s) 273, 537, 753, 840, 900, 972, 1239, 1515
BfmI CTRYAG 5 cut(s) 142, 633, 1380, 1806, 1911
BfoI RGCGCY 1 cut(s) 271
BfuAI ACCTGC 2 cut(s) 1096, 1618
BfuI GTATCC 2 cut(s) 779, 1910
BglII AGATCT 1 cut(s) 570
BlpI GCTNAGC 3 cut(s) 582, 1761, 2022
BmcAI AGTACT 1 cut(s) 757
Bme18I GGWCC 2 cut(s) 626, 977
BmeT110I CYCGRG 1 cut(s) 504
BmgBI CACGTC 1 cut(s) 950
BmgT120I GGNCC 6 cut(s) 29, 626, 977, 1483, 1628, 1832
BmiI GGNNCC 9 cut(s) 31, 66, 411, 487, 969, 1326, 1484, 1834, 1884
BmsI GCATC 8 cut(s) 325, 499, 505, 796, 1061, 1100, 1726, 1972
BmtI GCTAGC 1 cut(s) 1242
BplI GAGNNNNNCTC 2 cut(s) 557, 589
BpmI CTGGAG 4 cut(s) 546, 1038, 1398, 1461
Bpu10I CCTNAGC 2 cut(s) 609, 1815
Bpu1102I GCTNAGC 3 cut(s) 582, 1761, 2022
BpuEI CTTGAG 2 cut(s) 1284, 1635
BpuMI CCSGG 2 cut(s) 798, 1689
BsaAI YACGTR 1 cut(s) 1781
BsaHI GRCGYC 2 cut(s) 137, 237
BsaJI CCNNGG 5 cut(s) 195, 385, 796, 1207, 1478
BsaWI WCCGGW 2 cut(s) 302, 1751
BsaXI ACNNNNNCTCC 4 cut(s) 937, 967, 1912, 1942
Bse118I RCCGGY 1 cut(s) 86
Bse1I ACTGG 6 cut(s) 228, 368, 658, 964, 1594, 1794
Bse3DI GCAATG 1 cut(s) 918
BseAI TCCGGA 1 cut(s) 1751
BseDI CCNNGG 5 cut(s) 195, 385, 796, 1207, 1478
BseGI GGATG 5 cut(s) 102, 171, 520, 1717, 1790
BseMI GCAATG 1 cut(s) 918
BseNI ACTGG 6 cut(s) 228, 368, 658, 964, 1594, 1794
BsePI GCGCGC 1 cut(s) 190
BseRI GAGGAG 5 cut(s) 13, 77, 498, 1071, 1992
BseSI GKGCMC 2 cut(s) 1780, 1852
BseYI CCCAGC 4 cut(s) 907, 963, 1408, 1837
BsgI GTGCAG 2 cut(s) 1116, 1487
Bsh1236I CGCG 1 cut(s) 192
BshFI GGCC 8 cut(s) 5, 30, 182, 1254, 1347, 1485, 1630, 1833
BshNI GGYRCC 2 cut(s) 1324, 1882
BsiHKAI GWGCWC 4 cut(s) 1645, 1780, 1852, 2002
BsiHKCI CYCGRG 1 cut(s) 504
BsiSI CCGG 8 cut(s) 27, 39, 87, 252, 303, 798, 1689, 1752
BslFI GGGAC 3 cut(s) 137, 1612, 1769
BsmAI GTCTC 1 cut(s) 446
BsmFI GGGAC 3 cut(s) 137, 1612, 1769
BsmI GAATGC 1 cut(s) 1575
BsnI GGCC 8 cut(s) 5, 30, 182, 1254, 1347, 1485, 1630, 1833
BsoBI CYCGRG 1 cut(s) 504
Bsp1286I GDGCHC 5 cut(s) 970, 1645, 1780, 1852, 2002
Bsp13I TCCGGA 1 cut(s) 1751
Bsp1407I TGTACA 1 cut(s) 216
Bsp143I GATC 6 cut(s) 549, 570, 647, 1117, 1363, 1433
Bsp1720I GCTNAGC 3 cut(s) 582, 1761, 2022
BspANI GGCC 8 cut(s) 5, 30, 182, 1254, 1347, 1485, 1630, 1833
BspEI TCCGGA 1 cut(s) 1751
BspFNI CGCG 1 cut(s) 192
BspLI GGNNCC 9 cut(s) 31, 66, 411, 487, 969, 1326, 1484, 1834, 1884
BspMAI CTGCAG 2 cut(s) 1384, 1915
BspMI ACCTGC 2 cut(s) 1096, 1618
BspOI GCTAGC 1 cut(s) 1242
BspPI GGATC 2 cut(s) 1125, 1441
BspT107I GGYRCC 2 cut(s) 1324, 1882
BsrDI GCAATG 1 cut(s) 918
BsrFI RCCGGY 1 cut(s) 86
BsrGI TGTACA 1 cut(s) 216
BsrI ACTGG 6 cut(s) 228, 368, 658, 964, 1594, 1794
BssAI RCCGGY 1 cut(s) 86
BssECI CCNNGG 5 cut(s) 195, 385, 796, 1207, 1478
BssHII GCGCGC 1 cut(s) 190
BssMI GATC 6 cut(s) 549, 570, 647, 1117, 1363, 1433
BssNI GRCGYC 2 cut(s) 137, 237
BssSI CACGAG 1 cut(s) 1965
BssT1I CCWWGG 1 cut(s) 385
Bst2BI CACGAG 1 cut(s) 1965
Bst4CI ACNGT 5 cut(s) 530, 823, 867, 896, 1014
BstACI GRCGYC 2 cut(s) 137, 237
BstAPI GCANNNNNTGC 3 cut(s) 1499, 1940, 1982
BstAUI TGTACA 1 cut(s) 216
BstBAI YACGTR 1 cut(s) 1781
BstENI CCTNNNNNAGG 2 cut(s) 1266, 1476
BstF5I GGATG 5 cut(s) 102, 171, 520, 1717, 1790
BstFNI CGCG 1 cut(s) 192
BstH2I RGCGCY 1 cut(s) 271
BstHHI GCGC 4 cut(s) 192, 194, 270, 1225
BstKTI GATC 6 cut(s) 552, 573, 650, 1120, 1366, 1436
BstMAI GTCTC 1 cut(s) 446
BstMBI GATC 6 cut(s) 549, 570, 647, 1117, 1363, 1433
BstSFI CTRYAG 5 cut(s) 142, 633, 1380, 1806, 1911
BstSLI GKGCMC 2 cut(s) 1780, 1852
BstUI CGCG 1 cut(s) 192
BstX2I RGATCY 2 cut(s) 570, 1433
BstXI CCANNNNNNTGG 1 cut(s) 868
BstYI RGATCY 2 cut(s) 570, 1433
BsuI GTATCC 2 cut(s) 779, 1910
BsuRI GGCC 8 cut(s) 5, 30, 182, 1254, 1347, 1485, 1630, 1833
BtgZI GCGATG 1 cut(s) 102
BtrI CACGTC 1 cut(s) 950
BtsCI GGATG 5 cut(s) 102, 171, 520, 1717, 1790
BtsI GCAGTG 1 cut(s) 1497
BtsIMutI CAGTG 2 cut(s) 957, 1497
BveI ACCTGC 2 cut(s) 1096, 1618
CaiI CAGNNNCTG 2 cut(s) 668, 1130
CfoI GCGC 4 cut(s) 192, 194, 270, 1225
Cfr10I RCCGGY 1 cut(s) 86
Cfr13I GGNCC 6 cut(s) 29, 626, 977, 1483, 1628, 1832
CseI GACGC 2 cut(s) 139, 226
CsiI ACCWGGT 1 cut(s) 994
Csp6I GTAC 3 cut(s) 217, 756, 824
CviAII CATG 2 cut(s) 553, 1370
CviQI GTAC 3 cut(s) 217, 756, 824
DpnI GATC 6 cut(s) 551, 572, 649, 1119, 1365, 1435
DpnII GATC 6 cut(s) 549, 570, 647, 1117, 1363, 1433
EaeI YGGCCR 4 cut(s) 3, 180, 1252, 1345
Eco130I CCWWGG 1 cut(s) 385
Eco24I GRGCYC 1 cut(s) 970
Eco32I GATATC 2 cut(s) 1103, 1319
Eco47I GGWCC 2 cut(s) 626, 977
Eco57I CTGAAG 3 cut(s) 301, 452, 1965
Eco72I CACGTG 1 cut(s) 1781
Eco88I CYCGRG 1 cut(s) 504
EcoNI CCTNNNNNAGG 2 cut(s) 1266, 1476
EcoRV GATATC 2 cut(s) 1103, 1319
EcoT14I CCWWGG 1 cut(s) 385
EcoT22I ATGCAT 1 cut(s) 1054
EcoT38I GRGCYC 1 cut(s) 970
ErhI CCWWGG 1 cut(s) 385
FaeI CATG 2 cut(s) 556, 1373
FaqI GGGAC 3 cut(s) 137, 1612, 1769
FatI CATG 2 cut(s) 552, 1369
FauI CCCGC 2 cut(s) 83, 1545
FauNDI CATATG 3 cut(s) 1360, 1624, 1978
FbaI TGATCA 1 cut(s) 1363
FblI GTMKAC 1 cut(s) 165
FokI GGATG 5 cut(s) 89, 158, 527, 1704, 1777
FriOI GRGCYC 1 cut(s) 970
FspBI CTAG 8 cut(s) 273, 537, 753, 840, 900, 972, 1239, 1515
GlaI GCGC 4 cut(s) 191, 193, 269, 1224
GsaI CCCAGC 4 cut(s) 911, 967, 1412, 1841
GsuI CTGGAG 4 cut(s) 546, 1038, 1398, 1461
HaeII RGCGCY 1 cut(s) 271
HaeIII GGCC 8 cut(s) 5, 30, 182, 1254, 1347, 1485, 1630, 1833
HapII CCGG 8 cut(s) 27, 39, 87, 252, 303, 798, 1689, 1752
HgaI GACGC 2 cut(s) 139, 226
HhaI GCGC 4 cut(s) 192, 194, 270, 1225
Hin1I GRCGYC 2 cut(s) 137, 237
Hin1II CATG 2 cut(s) 556, 1373
Hin6I GCGC 4 cut(s) 190, 192, 268, 1223
HinP1I GCGC 4 cut(s) 190, 192, 268, 1223
HincII GTYRAC 3 cut(s) 166, 280, 1703
HindII GTYRAC 3 cut(s) 166, 280, 1703
HpaII CCGG 8 cut(s) 27, 39, 87, 252, 303, 798, 1689, 1752
HphI GGTGA 6 cut(s) 76, 317, 787, 812, 883, 1668
Hpy166II GTNNAC 8 cut(s) 166, 280, 443, 722, 845, 1703, 1778, 1850
Hpy188I TCNGA 2 cut(s) 334, 414
Hpy188III TCNNGA 8 cut(s) 480, 506, 563, 642, 1017, 1301, 1415, 1752
Hpy8I GTNNAC 8 cut(s) 166, 280, 443, 722, 845, 1703, 1778, 1850
Hpy99I CGWCG 6 cut(s) 11, 139, 167, 170, 242, 364
HpyAV CCTTC 5 cut(s) 120, 1071, 1560, 1758, 1940
HpyCH4III ACNGT 5 cut(s) 530, 823, 867, 896, 1014
HpyCH4IV ACGT 3 cut(s) 137, 949, 1780
HpySE526I ACGT 3 cut(s) 137, 949, 1780
Hsp92I GRCGYC 2 cut(s) 137, 237
Hsp92II CATG 2 cut(s) 556, 1373
HspAI GCGC 4 cut(s) 190, 192, 268, 1223
Kpn2I TCCGGA 1 cut(s) 1751
Ksp22I TGATCA 1 cut(s) 1363
Kzo9I GATC 6 cut(s) 549, 570, 647, 1117, 1363, 1433
LweI GCATC 8 cut(s) 325, 499, 505, 796, 1061, 1100, 1726, 1972
MabI ACCWGGT 1 cut(s) 994
MaeI CTAG 8 cut(s) 273, 537, 753, 840, 900, 972, 1239, 1515
MaeII ACGT 3 cut(s) 137, 949, 1780
MaeIII GTNAC 6 cut(s) 82, 305, 499, 800, 1532, 1674
MalI GATC 6 cut(s) 551, 572, 649, 1119, 1365, 1435
MboI GATC 6 cut(s) 549, 570, 647, 1117, 1363, 1433
MboII GAAGA 4 cut(s) 412, 458, 657, 782
MfeI CAATTG 1 cut(s) 1111
MflI RGATCY 2 cut(s) 570, 1433
MhlI GDGCHC 5 cut(s) 970, 1645, 1780, 1852, 2002
MlsI TGGCCA 3 cut(s) 182, 1254, 1347
MluCI AATT 6 cut(s) 687, 714, 828, 849, 1111, 1246
MluNI TGGCCA 3 cut(s) 182, 1254, 1347
MlyI GAGTC 3 cut(s) 119, 249, 1594
Mox20I TGGCCA 3 cut(s) 182, 1254, 1347
Mph1103I ATGCAT 1 cut(s) 1054
MroI TCCGGA 1 cut(s) 1751
MscI TGGCCA 3 cut(s) 182, 1254, 1347
MseI TTAA 3 cut(s) 459, 738, 2059
Msp20I TGGCCA 3 cut(s) 182, 1254, 1347
MspA1I CMGCKG 4 cut(s) 178, 1127, 1229, 1712
MspI CCGG 8 cut(s) 27, 39, 87, 252, 303, 798, 1689, 1752
MunI CAATTG 1 cut(s) 1111
Mva1269I GAATGC 1 cut(s) 1575
MvnI CGCG 1 cut(s) 192
NciI CCSGG 2 cut(s) 798, 1689
NdeI CATATG 3 cut(s) 1360, 1624, 1978
NdeII GATC 6 cut(s) 549, 570, 647, 1117, 1363, 1433
NheI GCTAGC 1 cut(s) 1238
NlaIII CATG 2 cut(s) 556, 1373
NlaIV GGNNCC 9 cut(s) 31, 66, 411, 487, 969, 1326, 1484, 1834, 1884
NmuCI GTSAC 4 cut(s) 82, 305, 800, 1674
NsiI ATGCAT 1 cut(s) 1054
PaeR7I CTCGAG 1 cut(s) 504
PaqCI CACCTGC 1 cut(s) 1618
PauI GCGCGC 1 cut(s) 190
PctI GAATGC 1 cut(s) 1575
PfeI GAWTC 9 cut(s) 35, 299, 364, 381, 493, 617, 778, 1445, 1769
PflMI CCANNNNNTGG 5 cut(s) 963, 1113, 1565, 1844, 1874
PleI GAGTC 3 cut(s) 119, 249, 1594
PmaCI CACGTG 1 cut(s) 1781
PmlI CACGTG 1 cut(s) 1781
PpsI GAGTC 3 cut(s) 119, 249, 1594
Ppu21I YACGTR 1 cut(s) 1781
PspCI CACGTG 1 cut(s) 1781
PspFI CCCAGC 4 cut(s) 907, 963, 1408, 1837
PspN4I GGNNCC 9 cut(s) 31, 66, 411, 487, 969, 1326, 1484, 1834, 1884
PspPI GGNCC 6 cut(s) 29, 626, 977, 1483, 1628, 1832
PstI CTGCAG 2 cut(s) 1384, 1915
PstNI CAGNNNCTG 2 cut(s) 668, 1130
PsuI RGATCY 2 cut(s) 570, 1433
PteI GCGCGC 1 cut(s) 190
PvuII CAGCTG 3 cut(s) 178, 1127, 1712
RsaI GTAC 3 cut(s) 218, 757, 825
RsaNI GTAC 3 cut(s) 217, 756, 824
SalI GTCGAC 1 cut(s) 164
SaqAI TTAA 3 cut(s) 459, 738, 2059
Sau3AI GATC 6 cut(s) 549, 570, 647, 1117, 1363, 1433
Sau96I GGNCC 6 cut(s) 29, 626, 977, 1483, 1628, 1832
ScaI AGTACT 1 cut(s) 757
SchI GAGTC 3 cut(s) 119, 249, 1594
SduI GDGCHC 5 cut(s) 970, 1645, 1780, 1852, 2002
SexAI ACCWGGT 1 cut(s) 994
SfaNI GCATC 8 cut(s) 325, 499, 505, 796, 1061, 1100, 1726, 1972
SfcI CTRYAG 5 cut(s) 142, 633, 1380, 1806, 1911
Sfr274I CTCGAG 1 cut(s) 504
SgrDI CGTCGACG 1 cut(s) 164
SinI GGWCC 2 cut(s) 626, 977
SlaI CTCGAG 1 cut(s) 504
SmlI CTYRAG 3 cut(s) 504, 1299, 1650
SmoI CTYRAG 3 cut(s) 504, 1299, 1650
SpeI ACTAGT 1 cut(s) 839
Sse9I AATT 6 cut(s) 687, 714, 828, 849, 1111, 1246
SspMI CTAG 8 cut(s) 273, 537, 753, 840, 900, 972, 1239, 1515
StyI CCWWGG 1 cut(s) 385
TaaI ACNGT 5 cut(s) 530, 823, 867, 896, 1014
TaiI ACGT 3 cut(s) 140, 952, 1783
TaqI TCGA 6 cut(s) 165, 258, 362, 505, 643, 813
TasI AATT 6 cut(s) 687, 714, 828, 849, 1111, 1246
TatI WGTACW 3 cut(s) 216, 755, 823
TauI GCSGC 8 cut(s) 45, 237, 245, 248, 251, 291, 294, 1261
TfiI GAWTC 9 cut(s) 35, 299, 364, 381, 493, 617, 778, 1445, 1769
Tru1I TTAA 3 cut(s) 459, 738, 2059
Tru9I TTAA 3 cut(s) 459, 738, 2059
TscAI CASTG 2 cut(s) 964, 1504
TseFI GTSAC 4 cut(s) 82, 305, 800, 1674
Tsp45I GTSAC 4 cut(s) 82, 305, 800, 1674
TspDTI ATGAA 3 cut(s) 612, 698, 891
TspRI CASTG 2 cut(s) 964, 1504
Van91I CCANNNNNTGG 5 cut(s) 963, 1113, 1565, 1844, 1874
VneI GTGCAC 2 cut(s) 1776, 1848
VpaK11BI GGWCC 2 cut(s) 626, 977
XagI CCTNNNNNAGG 2 cut(s) 1266, 1476
XapI RAATTY 1 cut(s) 687
XhoI CTCGAG 1 cut(s) 504
XmiI GTMKAC 1 cut(s) 165
XspI CTAG 8 cut(s) 273, 537, 753, 840, 900, 972, 1239, 1515
ZraI GACGTC 1 cut(s) 138
ZrmI AGTACT 1 cut(s) 757
Zsp2I ATGCAT 1 cut(s) 1054
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.