Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007390.1

Orthogroup ID

OG0009579

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 4721

Gene Structure 4721 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007390.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ggcggcggcctggaatctaagcgccctagagttgataatggcggtggcttcgattccggtgacaagggcttcagctctattccttctgatgccaagccttactcagctccatcgtcgatcccagtttcgtatgggttccaaggagggagcaaaaagattgatgttccaaatggcagggtcggtgttattattggtaaactgggtgagactattaagtatcttcaggctcagtctggaggagctaagattcaagttacccgagatgcagatgccgaccttaattgcccaactagggaggtggagatcatgggaactccagaacaaattgcaaaagctgagcatttgatacatgaagttcttgctgaggctgaatcaggcggtcctgccatagtttctcgaaggttaactggacaagctggagctgaaacatttgtaatgaaaattcctaacaacaaggttggtcttgtaattggtaaacgaggggaaactattaaaaatatgcaagctagtactgctgctcgtatacaggtgattcctttgcatcttccccccggtgacacctcaaccgaaaggacagtacagattgatggaactagtgaacaaattgaagctgccaaacagttggtgaatgaagttattagtgagaaccgtgttagaaatccagcaatggctggaggatattcacagcagggttatcaagcacgtcctcccactggctgggctcctagtggtcctccaatgcaacaaccaggatatggatatggacagtccggagcatattctggcacaacacctcagtataatgcatctcagccttcttattccggttatcctcctcaaccggcatctggtggatatcccaccaattgggatcagtcagctgttgcaccaactcagcagacctcccaggcaggtggttatgattactattcgcaacaaccctcataccaacagcaaaaccctggtggtccttctgcaccggcggataatgctagttacaattatggccagccgcctatttcaggctataatcagcaaggacaaggttatcctcaagatggctatggtggatatcaggcaccacctcaatctgggtatggccagccacctgcatacgatcaacatggttatcctgcagccaactatggtaatgtgagcaacccagctccagatacccatacttcctcttatggatctcagggggaatcagcccaagcacctcctgtgcagcctgctccagggggccagcaagcatacagtgccactcaacagcctagcccgaacccctcaagttatccgccccaagtgtctactcagccaggttatggaatgcccccaacttctcaaactggttatgggactcaaccacctgctcaatctgcatatggacctggatatggagcacctcaagcgcaaaagcctcctgctcagtcacccaccactcctggaggatatggtcaaccaccagctgtgcatccaggctatccccattctcagcctccaccttctggatatgctcagcctgattctggtgcacgtgctccaccatccagttatggttctacagcggctcaggcaggctatggtcccccatcttatggtgcaccgccatctggtcagccaggttatgggcaggtgccaccctacaatacatcttatggtgctgcaggatacacacagcctcctcctgcgtattctgctgaaggagcgaatggaaacactcgaggtgcatatgatggtgctggtgctggtgctggtgctggtgctggtactggtgctcctgcttcacagactgctcagcaaagtggagtcgccaaaacctccccacagagttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006417 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010033 GO:0010468 GO:0010494 GO:0010556 GO:0010558 GO:0010586 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010984 GO:0010985 GO:0010988 GO:0010989 GO:0016070 GO:0016071 GO:0017091 GO:0017148 GO:0019219 GO:0019222 GO:0019439 GO:0030425 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032991 GO:0034097 GO:0034248 GO:0034249 GO:0034641 GO:0034655 GO:0034660 GO:0035770 GO:0035925 GO:0036464 GO:0036477 GO:0042221 GO:0042995 GO:0043005 GO:0043025 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043487 GO:0043488 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044297 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044463 GO:0044464 GO:0045019 GO:0045428 GO:0045935 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050779 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0061013 GO:0061014 GO:0061157 GO:0061158 GO:0065007 GO:0065008 GO:0070013 GO:0070887 GO:0071310 GO:0071345 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097447 GO:0097458 GO:0120025 GO:0120038 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1903311 GO:1903313 GO:1903426 GO:1903427 GO:1904406 GO:1990904 GO:2000112 GO:2000113 GO:2000377 GO:2000378 GO:2000628

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

611

Amino Acids

62.43

Weight (kDa)

5.84

Isoelectric Point (pI)

50.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009579)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25970
fragaria_vesca	FvH4_2g32110
malus_domestica	MD08G1044200.v1.1 MD15G1061500.v1.1 MD15G1061600.v1.1
prunus_persica	Prupe.1G414200_v2.0.a1
pyrus_communis	pycom08g03570 pycom15g05750
rosa_chinensis	RchiOBHm_Chr6g0310631
rosa_laevigata	RLG00000010471
rosa_multiflora	Rmu_co8240427.1_g000001 Rmu_sc0005386.1_g000004 Rmu_sc0007390.1_g000001 Rmu_sc0020140.1_g000001
rosa_roxburghii	Rroxscaffold_7G00158400
rosa_rugosa	Rorug06G0381700
rosa_samantha	Rh6AG495600 Rh6AG495700 Rh6BG505200 Rh6CG510800 Rh6DG496600
rosa_wichuraiana	Rw6G043100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	4 cut(s)	902, 1117, 1378, 1624
Acc36I	ACCTGC	4 cut(s)	902, 1117, 1378, 1624
AccB1I	GGYRCC	2 cut(s)	1078, 1636
AccB7I	CCANNNNNTGG	7 cut(s)	717, 755, 867, 1325, 1508, 1598, 1628
AccI	GTMKAC	2 cut(s)	523, 1310
AccIII	TCCGGA	1 cut(s)	770
AciI	CCGC	9 cut(s)	3, 6, 42, 378, 983, 1013, 1298, 1568, 1607
AclWI	GGATC	3 cut(s)	112, 879, 1201
AcoI	YGGCCR	2 cut(s)	1006, 1099
AcsI	RAATTY	1 cut(s)	441
AcuI	CTGAAG	3 cut(s)	55, 206, 1722
AcvI	CACGTG	1 cut(s)	1538
AfaI	GTAC	3 cut(s)	511, 579, 1771
AgsI	TTSAA	2 cut(s)	251, 608
AhlI	ACTAGT	1 cut(s)	593
AjiI	CACGTC	1 cut(s)	704
Alw21I	GWGCWC	5 cut(s)	1405, 1537, 1543, 1606, 1780
Alw26I	GTCTC	1 cut(s)	200
Alw44I	GTGCAC	2 cut(s)	1533, 1602
AlwI	GGATC	3 cut(s)	112, 879, 1201
Ama87I	CYCGRG	2 cut(s)	258, 1722
Aor13HI	TCCGGA	1 cut(s)	770
AoxI	GGCC	4 cut(s)	7, 1006, 1099, 1243
ApaLI	GTGCAC	2 cut(s)	1533, 1602
ApeKI	GCWGC	5 cut(s)	515, 611, 1136, 1228, 1664
ApoI	RAATTY	1 cut(s)	441
AspLEI	GCGC	2 cut(s)	24, 1414
AspS9I	GGNCC	6 cut(s)	380, 731, 968, 1243, 1388, 1586
AsuC2I	CCSGG	1 cut(s)	552
AsuHPI	GGTGA	6 cut(s)	71, 215, 541, 566, 637, 1425
AvaI	CYCGRG	2 cut(s)	258, 1722
AvaII	GGWCC	5 cut(s)	380, 731, 968, 1388, 1586
BaeGI	GKGCMC	2 cut(s)	1537, 1606
BalI	TGGCCA	2 cut(s)	1008, 1101
BanI	GGYRCC	2 cut(s)	1078, 1636
BanII	GRGCYC	1 cut(s)	724
BbrPI	CACGTG	1 cut(s)	1538
Bbv12I	GWGCWC	5 cut(s)	1405, 1537, 1543, 1606, 1780
BbvCI	CCTCAGC	1 cut(s)	363
BbvI	GCAGC	5 cut(s)	502, 598, 1148, 1240, 1651
BccI	CCATC	7 cut(s)	118, 581, 1052, 1555, 1600, 1618, 1730
BciVI	GTATCC	1 cut(s)	1664
BcnI	CCSGG	1 cut(s)	552
BcoDI	GTCTC	1 cut(s)	200
BcuI	ACTAGT	1 cut(s)	593
BfaI	CTAG	7 cut(s)	27, 291, 507, 594, 726, 993, 1275
BfmI	CTRYAG	3 cut(s)	1134, 1563, 1665
BfoI	RGCGCY	1 cut(s)	25
BfuAI	ACCTGC	4 cut(s)	902, 1117, 1378, 1624
BfuI	GTATCC	1 cut(s)	1664
BisI	GCNGC	9 cut(s)	4, 7, 516, 612, 1013, 1137, 1229, 1569, 1665
BlpI	GCTNAGC	3 cut(s)	336, 1518, 1797
BlsI	GCNGC	9 cut(s)	5, 8, 517, 613, 1014, 1138, 1230, 1570, 1666
BmcAI	AGTACT	1 cut(s)	511
Bme18I	GGWCC	5 cut(s)	380, 731, 968, 1388, 1586
BmeT110I	CYCGRG	2 cut(s)	258, 1722
BmgBI	CACGTC	1 cut(s)	704
BmgT120I	GGNCC	6 cut(s)	380, 731, 968, 1243, 1388, 1586
BmiI	GGNNCC	6 cut(s)	137, 723, 1080, 1244, 1588, 1638
BmrI	ACTGGG	2 cut(s)	116, 209
BmsI	GCATC	7 cut(s)	79, 253, 259, 550, 815, 854, 1483
BmuI	ACTGGG	2 cut(s)	116, 209
BpmI	CTGGAG	7 cut(s)	255, 300, 438, 693, 1152, 1221, 1467
Bpu10I	CCTNAGC	2 cut(s)	363, 1572
Bpu1102I	GCTNAGC	3 cut(s)	336, 1518, 1797
BpuEI	CTTGAG	3 cut(s)	1038, 1273, 1392
BpuMI	CCSGG	1 cut(s)	552
BsaAI	YACGTR	1 cut(s)	1538
BsaJI	CCNNGG	5 cut(s)	139, 550, 906, 961, 1238
BsaWI	WCCGGW	3 cut(s)	56, 770, 824
BsaXI	ACNNNNNCTCC	4 cut(s)	1666, 1696, 1762, 1792
Bse118I	RCCGGY	2 cut(s)	841, 979
Bse1I	ACTGG	7 cut(s)	122, 204, 412, 718, 1354, 1551, 1777
Bse3DI	GCAATG	1 cut(s)	672
BseAI	TCCGGA	1 cut(s)	770
BseDI	CCNNGG	5 cut(s)	139, 550, 906, 961, 1238
BseGI	GGATG	2 cut(s)	1474, 1547
BseMI	GCAATG	1 cut(s)	672
BseNI	ACTGG	7 cut(s)	122, 204, 412, 718, 1354, 1551, 1777
BseRI	GAGGAG	3 cut(s)	252, 825, 1674
BseSI	GKGCMC	2 cut(s)	1537, 1606
BseXI	GCAGC	5 cut(s)	502, 598, 1148, 1240, 1651
BseYI	CCCAGC	2 cut(s)	717, 1162
BsgI	GTGCAG	2 cut(s)	960, 1247
BshFI	GGCC	4 cut(s)	9, 1008, 1101, 1245
BshNI	GGYRCC	2 cut(s)	1078, 1636
BsiHKAI	GWGCWC	5 cut(s)	1405, 1537, 1543, 1606, 1780
BsiHKCI	CYCGRG	2 cut(s)	258, 1722
BsiSI	CCGG	6 cut(s)	57, 552, 771, 825, 842, 980
BslFI	GGGAC	2 cut(s)	1372, 1572
BsmAI	GTCTC	1 cut(s)	200
BsmFI	GGGAC	2 cut(s)	1372, 1572
BsmI	GAATGC	1 cut(s)	1335
BsnI	GGCC	4 cut(s)	9, 1008, 1101, 1245
BsoBI	CYCGRG	2 cut(s)	258, 1722
Bsp1286I	GDGCHC	6 cut(s)	724, 1405, 1537, 1543, 1606, 1780
Bsp13I	TCCGGA	1 cut(s)	770
Bsp143I	GATC	5 cut(s)	117, 303, 871, 1117, 1193
Bsp1720I	GCTNAGC	3 cut(s)	336, 1518, 1797
BspACI	CCGC	9 cut(s)	3, 6, 42, 378, 983, 1013, 1298, 1568, 1607
BspANI	GGCC	4 cut(s)	9, 1008, 1101, 1245
BspEI	TCCGGA	1 cut(s)	770
BspLI	GGNNCC	6 cut(s)	137, 723, 1080, 1244, 1588, 1638
BspMAI	CTGCAG	2 cut(s)	1138, 1669
BspMI	ACCTGC	4 cut(s)	902, 1117, 1378, 1624
BspPI	GGATC	3 cut(s)	112, 879, 1201
BspT107I	GGYRCC	2 cut(s)	1078, 1636
BsrDI	GCAATG	1 cut(s)	672
BsrFI	RCCGGY	2 cut(s)	841, 979
BsrI	ACTGG	7 cut(s)	122, 204, 412, 718, 1354, 1551, 1777
BssAI	RCCGGY	2 cut(s)	841, 979
BssECI	CCNNGG	5 cut(s)	139, 550, 906, 961, 1238
BssMI	GATC	5 cut(s)	117, 303, 871, 1117, 1193
BssNAI	GTATAC	1 cut(s)	524
BssT1I	CCWWGG	1 cut(s)	139
Bst1107I	GTATAC	1 cut(s)	524
Bst4CI	ACNGT	5 cut(s)	577, 621, 650, 768, 1259
BstAPI	GCANNNNNTGC	1 cut(s)	1259
BstBAI	YACGTR	1 cut(s)	1538
BstC8I	GCNNGC	7 cut(s)	504, 1010, 1103, 1233, 1247, 1251, 1579
BstENI	CCTNNNNNAGG	2 cut(s)	1020, 1236
BstF5I	GGATG	2 cut(s)	1474, 1547
BstH2I	RGCGCY	1 cut(s)	25
BstHHI	GCGC	2 cut(s)	24, 1414
BstKTI	GATC	5 cut(s)	120, 306, 874, 1120, 1196
BstMAI	GTCTC	1 cut(s)	200
BstMBI	GATC	5 cut(s)	117, 303, 871, 1117, 1193
BstMWI	GCNNNNNNNGC	8 cut(s)	512, 989, 1259, 1379, 1409, 1574, 1697, 1706
BstSFI	CTRYAG	3 cut(s)	1134, 1563, 1665
BstSLI	GKGCMC	2 cut(s)	1537, 1606
BstV1I	GCAGC	5 cut(s)	502, 598, 1148, 1240, 1651
BstX2I	RGATCY	1 cut(s)	1193
BstXI	CCANNNNNNTGG	2 cut(s)	622, 914
BstYI	RGATCY	1 cut(s)	1193
BstZ17I	GTATAC	1 cut(s)	524
BsuI	GTATCC	1 cut(s)	1664
BsuRI	GGCC	4 cut(s)	9, 1008, 1101, 1245
BtrI	CACGTC	1 cut(s)	704
BtsCI	GGATG	2 cut(s)	1474, 1547
BtsIMutI	CAGTG	2 cut(s)	711, 1264
BveI	ACCTGC	4 cut(s)	902, 1117, 1378, 1624
Cac8I	GCNNGC	7 cut(s)	504, 1010, 1103, 1233, 1247, 1251, 1579
CfoI	GCGC	2 cut(s)	24, 1414
Cfr10I	RCCGGY	2 cut(s)	841, 979
Cfr13I	GGNCC	6 cut(s)	380, 731, 968, 1243, 1388, 1586
Csp6I	GTAC	3 cut(s)	510, 578, 1770
CviAII	CATG	3 cut(s)	307, 350, 1124
CviQI	GTAC	3 cut(s)	510, 578, 1770
DpnI	GATC	5 cut(s)	119, 305, 873, 1119, 1195
DpnII	GATC	5 cut(s)	117, 303, 871, 1117, 1193
EaeI	YGGCCR	2 cut(s)	1006, 1099
EciI	GGCGGA	2 cut(s)	998, 1287
Eco130I	CCWWGG	1 cut(s)	139
Eco24I	GRGCYC	1 cut(s)	724
Eco32I	GATATC	2 cut(s)	857, 1073
Eco47I	GGWCC	5 cut(s)	380, 731, 968, 1388, 1586
Eco57I	CTGAAG	3 cut(s)	55, 206, 1722
Eco72I	CACGTG	1 cut(s)	1538
Eco88I	CYCGRG	2 cut(s)	258, 1722
EcoNI	CCTNNNNNAGG	2 cut(s)	1020, 1236
EcoRV	GATATC	2 cut(s)	857, 1073
EcoT14I	CCWWGG	1 cut(s)	139
EcoT22I	ATGCAT	1 cut(s)	808
EcoT38I	GRGCYC	1 cut(s)	724
ErhI	CCWWGG	1 cut(s)	139
FaeI	CATG	3 cut(s)	310, 353, 1127
FaqI	GGGAC	2 cut(s)	1372, 1572
FatI	CATG	3 cut(s)	306, 349, 1123
FauNDI	CATATG	2 cut(s)	1384, 1732
FblI	GTMKAC	2 cut(s)	523, 1310
Fnu4HI	GCNGC	9 cut(s)	4, 7, 516, 612, 1013, 1137, 1229, 1569, 1665
FokI	GGATG	2 cut(s)	1461, 1534
FriOI	GRGCYC	1 cut(s)	724
Fsp4HI	GCNGC	9 cut(s)	4, 7, 516, 612, 1013, 1137, 1229, 1569, 1665
FspBI	CTAG	7 cut(s)	27, 291, 507, 594, 726, 993, 1275
GlaI	GCGC	2 cut(s)	23, 1413
GluI	GCNGC	9 cut(s)	4, 7, 516, 612, 1013, 1137, 1229, 1569, 1665
GsaI	CCCAGC	2 cut(s)	721, 1166
GsuI	CTGGAG	7 cut(s)	255, 300, 438, 693, 1152, 1221, 1467
HaeII	RGCGCY	1 cut(s)	25
HaeIII	GGCC	4 cut(s)	9, 1008, 1101, 1245
HapII	CCGG	6 cut(s)	57, 552, 771, 825, 842, 980
HhaI	GCGC	2 cut(s)	24, 1414
Hin1II	CATG	3 cut(s)	310, 353, 1127
Hin6I	GCGC	2 cut(s)	22, 1412
HinP1I	GCGC	2 cut(s)	22, 1412
HincII	GTYRAC	2 cut(s)	405, 1460
HindII	GTYRAC	2 cut(s)	405, 1460
HinfI	GANTC	9 cut(s)	14, 53, 247, 371, 532, 1205, 1360, 1526, 1809
HpaI	GTTAAC	1 cut(s)	405
HpaII	CCGG	6 cut(s)	57, 552, 771, 825, 842, 980
HphI	GGTGA	6 cut(s)	71, 215, 541, 566, 637, 1425
Hpy166II	GTNNAC	9 cut(s)	197, 405, 476, 524, 599, 1311, 1460, 1535, 1604
Hpy188I	TCNGA	1 cut(s)	88
Hpy188III	TCNNGA	7 cut(s)	234, 317, 396, 771, 1055, 1169, 1509
Hpy8I	GTNNAC	9 cut(s)	197, 405, 476, 524, 599, 1311, 1460, 1535, 1604
Hpy99I	CGWCG	1 cut(s)	118
HpyAV	CCTTC	6 cut(s)	93, 393, 825, 981, 1515, 1697
HpyCH4III	ACNGT	5 cut(s)	577, 621, 650, 768, 1259
HpyCH4IV	ACGT	2 cut(s)	703, 1537
HpyF10VI	GCNNNNNNNGC	8 cut(s)	512, 989, 1259, 1379, 1409, 1574, 1697, 1706
HpySE526I	ACGT	2 cut(s)	703, 1537
Hsp92II	CATG	3 cut(s)	310, 353, 1127
HspAI	GCGC	2 cut(s)	22, 1412
Kpn2I	TCCGGA	1 cut(s)	770
KspAI	GTTAAC	1 cut(s)	405
Kzo9I	GATC	5 cut(s)	117, 303, 871, 1117, 1193
Lsp1109I	GCAGC	5 cut(s)	502, 598, 1148, 1240, 1651
LweI	GCATC	7 cut(s)	79, 253, 259, 550, 815, 854, 1483
MaeI	CTAG	7 cut(s)	27, 291, 507, 594, 726, 993, 1275
MaeII	ACGT	2 cut(s)	703, 1537
MaeIII	GTNAC	5 cut(s)	59, 253, 554, 995, 1431
MalI	GATC	5 cut(s)	119, 305, 873, 1119, 1195
MboI	GATC	5 cut(s)	117, 303, 871, 1117, 1193
MboII	GAAGA	2 cut(s)	212, 536
MfeI	CAATTG	1 cut(s)	865
MflI	RGATCY	1 cut(s)	1193
MhlI	GDGCHC	6 cut(s)	724, 1405, 1537, 1543, 1606, 1780
MlsI	TGGCCA	2 cut(s)	1008, 1101
MluCI	AATT	7 cut(s)	280, 324, 441, 468, 603, 865, 1000
MluNI	TGGCCA	2 cut(s)	1008, 1101
MlyI	GAGTC	2 cut(s)	1354, 1818
Mox20I	TGGCCA	2 cut(s)	1008, 1101
Mph1103I	ATGCAT	1 cut(s)	808
MroI	TCCGGA	1 cut(s)	770
MscI	TGGCCA	2 cut(s)	1008, 1101
MseI	TTAA	4 cut(s)	213, 279, 404, 492
Msp20I	TGGCCA	2 cut(s)	1008, 1101
MspA1I	CMGCKG	3 cut(s)	881, 1469, 1568
MspI	CCGG	6 cut(s)	57, 552, 771, 825, 842, 980
MunI	CAATTG	1 cut(s)	865
Mva1269I	GAATGC	1 cut(s)	1335
MwoI	GCNNNNNNNGC	8 cut(s)	512, 989, 1259, 1379, 1409, 1574, 1697, 1706
NciI	CCSGG	1 cut(s)	552
NdeI	CATATG	2 cut(s)	1384, 1732
NdeII	GATC	5 cut(s)	117, 303, 871, 1117, 1193
NlaIII	CATG	3 cut(s)	310, 353, 1127
NlaIV	GGNNCC	6 cut(s)	137, 723, 1080, 1244, 1588, 1638
NmuCI	GTSAC	3 cut(s)	59, 554, 1431
NsiI	ATGCAT	1 cut(s)	808
PaeR7I	CTCGAG	1 cut(s)	1722
PaqCI	CACCTGC	4 cut(s)	902, 1117, 1378, 1624
PctI	GAATGC	1 cut(s)	1335
PfeI	GAWTC	7 cut(s)	14, 53, 247, 371, 532, 1205, 1526
PflMI	CCANNNNNTGG	7 cut(s)	717, 755, 867, 1325, 1508, 1598, 1628
PfoI	TCCNGGA	1 cut(s)	1444
PkrI	GCNGC	9 cut(s)	5, 8, 517, 613, 1014, 1138, 1230, 1570, 1666
PleI	GAGTC	2 cut(s)	1354, 1817
PmaCI	CACGTG	1 cut(s)	1538
PmlI	CACGTG	1 cut(s)	1538
PpsI	GAGTC	2 cut(s)	1354, 1817
Ppu21I	YACGTR	1 cut(s)	1538
PspCI	CACGTG	1 cut(s)	1538
PspFI	CCCAGC	2 cut(s)	717, 1162
PspN4I	GGNNCC	6 cut(s)	137, 723, 1080, 1244, 1588, 1638
PspPI	GGNCC	6 cut(s)	380, 731, 968, 1243, 1388, 1586
PspXI	VCTCGAGB	1 cut(s)	1722
PstI	CTGCAG	2 cut(s)	1138, 1669
PsuI	RGATCY	1 cut(s)	1193
PvuII	CAGCTG	2 cut(s)	881, 1469
RsaI	GTAC	3 cut(s)	511, 579, 1771
RsaNI	GTAC	3 cut(s)	510, 578, 1770
SaqAI	TTAA	4 cut(s)	213, 279, 404, 492
SatI	GCNGC	9 cut(s)	4, 7, 516, 612, 1013, 1137, 1229, 1569, 1665
Sau3AI	GATC	5 cut(s)	117, 303, 871, 1117, 1193
Sau96I	GGNCC	6 cut(s)	380, 731, 968, 1243, 1388, 1586
ScaI	AGTACT	1 cut(s)	511
SchI	GAGTC	2 cut(s)	1354, 1818
SduI	GDGCHC	6 cut(s)	724, 1405, 1537, 1543, 1606, 1780
SfaNI	GCATC	7 cut(s)	79, 253, 259, 550, 815, 854, 1483
SfcI	CTRYAG	3 cut(s)	1134, 1563, 1665
Sfr274I	CTCGAG	1 cut(s)	1722
SgrAI	CRCCGGYG	1 cut(s)	979
SinI	GGWCC	5 cut(s)	380, 731, 968, 1388, 1586
SlaI	CTCGAG	1 cut(s)	1722
SmlI	CTYRAG	4 cut(s)	1053, 1288, 1407, 1722
SmoI	CTYRAG	4 cut(s)	1053, 1288, 1407, 1722
SpeI	ACTAGT	1 cut(s)	593
Sse9I	AATT	7 cut(s)	280, 324, 441, 468, 603, 865, 1000
SsiI	CCGC	9 cut(s)	3, 6, 42, 378, 983, 1013, 1298, 1568, 1607
SspMI	CTAG	7 cut(s)	27, 291, 507, 594, 726, 993, 1275
StyI	CCWWGG	1 cut(s)	139
TaaI	ACNGT	5 cut(s)	577, 621, 650, 768, 1259
TaiI	ACGT	2 cut(s)	706, 1540
TaqI	TCGA	4 cut(s)	51, 116, 397, 1723
TasI	AATT	7 cut(s)	280, 324, 441, 468, 603, 865, 1000
TatI	WGTACW	2 cut(s)	509, 577
TauI	GCSGC	4 cut(s)	6, 9, 1015, 1571
TfiI	GAWTC	7 cut(s)	14, 53, 247, 371, 532, 1205, 1526
Tru1I	TTAA	4 cut(s)	213, 279, 404, 492
Tru9I	TTAA	4 cut(s)	213, 279, 404, 492
TscAI	CASTG	2 cut(s)	718, 1264
TseFI	GTSAC	3 cut(s)	59, 554, 1431
TseI	GCWGC	5 cut(s)	515, 611, 1136, 1228, 1664
Tsp45I	GTSAC	3 cut(s)	59, 554, 1431
TspDTI	ATGAA	3 cut(s)	366, 452, 645
TspRI	CASTG	2 cut(s)	718, 1264
Van91I	CCANNNNNTGG	7 cut(s)	717, 755, 867, 1325, 1508, 1598, 1628
VneI	GTGCAC	2 cut(s)	1533, 1602
VpaK11BI	GGWCC	5 cut(s)	380, 731, 968, 1388, 1586
XagI	CCTNNNNNAGG	2 cut(s)	1020, 1236
XapI	RAATTY	1 cut(s)	441
XhoI	CTCGAG	1 cut(s)	1722
XmiI	GTMKAC	2 cut(s)	523, 1310
XspI	CTAG	7 cut(s)	27, 291, 507, 594, 726, 993, 1275
ZrmI	AGTACT	1 cut(s)	511
Zsp2I	ATGCAT	1 cut(s)	808

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.