Rh6DG496600

Far upstream element-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0009579
Physical Location & Seq
Forward (+)
65423244 .. 65428836
5593 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG496600.1

Sequence Viewer

Length: 2058 bp
ATGGCCGACGAAGCACAATACTCCTCCGGGCCCGATTCCGGCAGCAATAAGCGAAAATATGAGGAGCCTACTACCCGCAGGGTCACCGGCTTCTCAGCCCCCATCATCGCCTCCTCATCGCCCGACTCTGTCCCCACGTCCTACAGCAGCGTTCCTCCGCCCGTCGACGACATCCAGCTCGCCAAGCAGCGCGCTCAGGAGATTGCTGCTCGATTGTTCAACAACGCCAGTAGCGGCGTTGCTGCCGGCGGCGGCGGCCTGGAATCTAAGCGCCCTAGAGTTGATAATGGCGGTGGCTTCGATTCCGGTGACAAGGGCTTCAGCTCTATTCCCTCTGATGCCAAGCCTTACTCAGCTCCATCGTCGATCCCAGTTTCGTATGGGTTCCAAGGAGGGAGCAAAAAGATTGATGTTCCAAATGGCAGGGTTGGTGTTATTATTGGTAAACTGGGTGAGACTATTAAGTATCTTCAGGCTCAGTCTGGAGGAGCCAAGATTCAAGTTACCCGAGATGCAGATGCCGACCTTAATTGCCCAACTAGGGAGGTGGAGATCATGGGAACTCCAGAACAAATTGCAAAAGCTGAGCGTTTGATAAATGAAGTTCTTGCTGAGGCTGAATCAGGCGGTCCTGCCATAGTTTCTCGAAGGTTAACTGGACAAGCTGGAGCTGAAACATTTGTAATGAAAATTCCTAACAACAAGGTTGGTCTTGTAATTGGTAAACGAGGGGAAACTATTAAAAATATGCAAGCTAGTACTGCTGCTCGTATACAGGTGATTCCTTTGCATCTTCCCCCCGGTGATACCTCATCCGAAAGGACGGTACAGATTGATGGAACTAGTGAACAAATTGAAGCTGCCAAACAGTTGGTGAATGAAGTTATTAGTGAGAACCGTGTTAGAAATCCAGCAATGGCTGGAGGATATTCACAGCAGGGTTATCAAGCACGTCCTCCCACTGGCTGGGCTCCTAGTGGTCCTCCAATGCAACAACCAGGTTATGGATATGGACAGTCCGGAGCATATTCTGGCACAACACCTCAGTATAATGCATCTCAGCCTTCTTATCCCGGTTATCCTCCTCAACCGGCATCTGGTGGATATCCCACCAATTGGGATCAGTCAGCTGTTGCACCAACTCAGCAGACCTCCCAGGCAGGTGGTTATGATTACTATTCCCAACAACCCCACCAACAGCAAAACCCTGGTGGTCCTGCTGCACCAGCGGATAATGCTAGTTACAATTATGGCCAGCCGCCTATTTCAGGCTATAATCAGCAAGGACAAGGTTATCCTCAAGATGGCTATGGTGGATATCAGGCACCACCTCAATCTGGGTATGGCCAGCCACCTGCATACGATCAACATGGTTATCCTGCAGCCAACTATGGTAATGTGAGCAACCCAGCTCCAGATACCCATACTTCCTCTTATGGATCTCAGGGGGAATCAGCCCAAGCACCTCCTGTGCAGCCTGCTCCAGGGGGCCAGCAAGCATACAGTGCCACTCAACAGCCTAGCCCGAACCCCGCAAGTTATCCGCCCCAAGTGTCGACTCAGCCAGGTTATGGAATGCCCCCAACTTCTCAAACTGGTTATGGGACTCAACCACCTGCTCAATCTGCATATGGACCTGGATATGGAGCACCTCAAGCGCAAAAGCCTCCTGCTCAGTCACCCACTACTCCTGGAGGATATGGTCAACCACCAGCTGTGCATCCAGGCTATCCCCATTCTCAGCCTCCACCTTCTGGATATGCTCAGCCTGATTCTGGTGCACGTGCTCCACCATCCAGTTATGGTTCTACAGCGGCTCAGGCAGGCTATGGTCCCCCATCTTATGGTGCACCGCCATCTGGTCAGCCAGGTTATGGGCAGGTGCCACCCTACAATACATCTTATGGTGCTGCAGGATACACACAGCCTCCTCCTGCATATTCTGCTGAAGGAGCGAATGGAAACACTCGAGGTGCATATGATGGTGCTGGTGCTGGTGCTCCTGCTTCACAGACTGCTCAGCAAAGTGGAGTCGCCAAAACTTCCCCACAGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001505 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006417 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010033 GO:0010468 GO:0010494 GO:0010556 GO:0010558 GO:0010586 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010984 GO:0010985 GO:0010988 GO:0010989 GO:0016070 GO:0016071 GO:0017091 GO:0017148 GO:0019219 GO:0019222 GO:0019439 GO:0030425 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032991 GO:0034097 GO:0034248 GO:0034249 GO:0034641 GO:0034655 GO:0034660 GO:0035770 GO:0035925 GO:0036464 GO:0036477 GO:0042221 GO:0042995 GO:0043005 GO:0043025 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043487 GO:0043488 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044297 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044463 GO:0044464 GO:0045019 GO:0045428 GO:0045935 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050779 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0061013 GO:0061014 GO:0061157 GO:0061158 GO:0065007 GO:0065008 GO:0070013 GO:0070887 GO:0071310 GO:0071345 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097447 GO:0097458 GO:0120025 GO:0120038 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1903311 GO:1903313 GO:1903426 GO:1903427 GO:1904406 GO:1990904 GO:2000112 GO:2000113 GO:2000377 GO:2000378 GO:2000628
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KH_1

Protein Analysis

685

Amino Acids

70.41

Weight (kDa)

5.78

Isoelectric Point (pI)

53.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KH_1 PF00013 134 - 201 2.4e-17 KH domain
KH_1 PF00013 226 - 294 1.3e-18 KH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 4 cut(s) 1151, 1363, 1624, 1870
Acc36I ACCTGC 4 cut(s) 1151, 1363, 1624, 1870
AccB1I GGYRCC 2 cut(s) 1324, 1882
AccB7I CCANNNNNTGG 7 cut(s) 966, 1004, 1116, 1571, 1754, 1844, 1874
AccI GTMKAC 3 cut(s) 165, 772, 1556
AccII CGCG 1 cut(s) 192
AccIII TCCGGA 1 cut(s) 1019
AclWI GGATC 3 cut(s) 361, 1128, 1447
AcoI YGGCCR 3 cut(s) 3, 1252, 1345
AcsI RAATTY 1 cut(s) 690
AcuI CTGAAG 3 cut(s) 304, 455, 1968
AcvI CACGTG 1 cut(s) 1784
AfaI GTAC 2 cut(s) 760, 828
AgsI TTSAA 3 cut(s) 220, 500, 857
AhlI ACTAGT 1 cut(s) 842
AjiI CACGTC 2 cut(s) 138, 953
Alw21I GWGCWC 5 cut(s) 1651, 1783, 1789, 1852, 2002
Alw26I GTCTC 1 cut(s) 449
Alw44I GTGCAC 2 cut(s) 1779, 1848
AlwI GGATC 3 cut(s) 361, 1128, 1447
Ama87I CYCGRG 2 cut(s) 507, 1968
Aor13HI TCCGGA 1 cut(s) 1019
AoxI GGCC 6 cut(s) 3, 29, 256, 1252, 1345, 1489
ApaI GGGCCC 1 cut(s) 33
ApaLI GTGCAC 2 cut(s) 1779, 1848
ApoI RAATTY 1 cut(s) 690
AspLEI GCGC 4 cut(s) 192, 194, 273, 1660
AspS9I GGNCC 8 cut(s) 29, 30, 629, 980, 1214, 1489, 1634, 1832
AsuC2I CCSGG 3 cut(s) 28, 801, 1074
AsuHPI GGTGA 7 cut(s) 76, 320, 464, 790, 815, 886, 1671
AvaI CYCGRG 2 cut(s) 507, 1968
AvaII GGWCC 5 cut(s) 629, 980, 1214, 1634, 1832
BaeGI GKGCMC 3 cut(s) 33, 1783, 1852
BalI TGGCCA 2 cut(s) 1254, 1347
BanI GGYRCC 2 cut(s) 1324, 1882
BanII GRGCYC 2 cut(s) 33, 973
BbrPI CACGTG 1 cut(s) 1784
Bbv12I GWGCWC 5 cut(s) 1651, 1783, 1789, 1852, 2002
BbvCI CCTCAGC 1 cut(s) 612
BccI CCATC 8 cut(s) 110, 367, 830, 1298, 1801, 1846, 1864, 1976
BciVI GTATCC 1 cut(s) 1910
BcnI CCSGG 3 cut(s) 28, 801, 1074
BcoDI GTCTC 1 cut(s) 449
BcuI ACTAGT 1 cut(s) 842
BfaI CTAG 7 cut(s) 276, 540, 756, 843, 975, 1239, 1521
BfmI CTRYAG 4 cut(s) 142, 1380, 1809, 1911
BfoI RGCGCY 1 cut(s) 274
BfuAI ACCTGC 4 cut(s) 1151, 1363, 1624, 1870
BfuI GTATCC 1 cut(s) 1910
BlpI GCTNAGC 3 cut(s) 585, 1764, 2019
BmcAI AGTACT 1 cut(s) 760
Bme18I GGWCC 5 cut(s) 629, 980, 1214, 1634, 1832
BmeT110I CYCGRG 2 cut(s) 507, 1968
BmgBI CACGTC 2 cut(s) 138, 953
BmgT120I GGNCC 8 cut(s) 29, 30, 629, 980, 1214, 1489, 1634, 1832
BmiI GGNNCC 9 cut(s) 31, 66, 386, 490, 972, 1326, 1490, 1834, 1884
BmrI ACTGGG 2 cut(s) 365, 458
BmsI GCATC 7 cut(s) 328, 502, 508, 799, 1064, 1103, 1729
BmuI ACTGGG 2 cut(s) 365, 458
BpmI CTGGAG 7 cut(s) 504, 549, 687, 942, 1398, 1467, 1713
Bpu10I CCTNAGC 3 cut(s) 195, 612, 1818
Bpu1102I GCTNAGC 3 cut(s) 585, 1764, 2019
BpuEI CTTGAG 2 cut(s) 1284, 1638
BpuMI CCSGG 3 cut(s) 28, 801, 1074
BsaAI YACGTR 1 cut(s) 1784
BsaJI CCNNGG 5 cut(s) 388, 799, 1155, 1207, 1484
BsaWI WCCGGW 2 cut(s) 305, 1019
BsaXI ACNNNNNCTCC 2 cut(s) 1912, 1942
Bse118I RCCGGY 3 cut(s) 86, 245, 1090
Bse1I ACTGG 7 cut(s) 228, 371, 453, 661, 967, 1600, 1797
Bse3DI GCAATG 1 cut(s) 921
BseAI TCCGGA 1 cut(s) 1019
BseDI CCNNGG 5 cut(s) 388, 799, 1155, 1207, 1484
BseGI GGATG 4 cut(s) 171, 812, 1720, 1793
BseMI GCAATG 1 cut(s) 921
BseNI ACTGG 7 cut(s) 228, 371, 453, 661, 967, 1600, 1797
BsePI GCGCGC 1 cut(s) 190
BseRI GAGGAG 6 cut(s) 13, 77, 103, 501, 1074, 1920
BseSI GKGCMC 3 cut(s) 33, 1783, 1852
BseYI CCCAGC 2 cut(s) 966, 1408
BsgI GTGCAG 2 cut(s) 1206, 1493
Bsh1236I CGCG 1 cut(s) 192
BshFI GGCC 6 cut(s) 5, 31, 258, 1254, 1347, 1491
BshNI GGYRCC 2 cut(s) 1324, 1882
BsiHKAI GWGCWC 5 cut(s) 1651, 1783, 1789, 1852, 2002
BsiHKCI CYCGRG 2 cut(s) 507, 1968
BsiSI CCGG 9 cut(s) 27, 39, 87, 246, 306, 801, 1020, 1074, 1091
BslFI GGGAC 3 cut(s) 116, 1618, 1818
BsmAI GTCTC 1 cut(s) 449
BsmFI GGGAC 3 cut(s) 116, 1618, 1818
BsmI GAATGC 1 cut(s) 1581
BsnI GGCC 6 cut(s) 5, 31, 258, 1254, 1347, 1491
BsoBI CYCGRG 2 cut(s) 507, 1968
Bsp120I GGGCCC 1 cut(s) 29
Bsp1286I GDGCHC 7 cut(s) 33, 973, 1651, 1783, 1789, 1852, 2002
Bsp13I TCCGGA 1 cut(s) 1019
Bsp143I GATC 5 cut(s) 366, 552, 1120, 1363, 1439
Bsp1720I GCTNAGC 3 cut(s) 585, 1764, 2019
BspANI GGCC 6 cut(s) 5, 31, 258, 1254, 1347, 1491
BspEI TCCGGA 1 cut(s) 1019
BspFNI CGCG 1 cut(s) 192
BspLI GGNNCC 9 cut(s) 31, 66, 386, 490, 972, 1326, 1490, 1834, 1884
BspMAI CTGCAG 2 cut(s) 1384, 1915
BspMI ACCTGC 4 cut(s) 1151, 1363, 1624, 1870
BspPI GGATC 3 cut(s) 361, 1128, 1447
BspT107I GGYRCC 2 cut(s) 1324, 1882
BsrDI GCAATG 1 cut(s) 921
BsrFI RCCGGY 3 cut(s) 86, 245, 1090
BsrI ACTGG 7 cut(s) 228, 371, 453, 661, 967, 1600, 1797
BssAI RCCGGY 3 cut(s) 86, 245, 1090
BssECI CCNNGG 5 cut(s) 388, 799, 1155, 1207, 1484
BssHII GCGCGC 1 cut(s) 190
BssMI GATC 5 cut(s) 366, 552, 1120, 1363, 1439
BssNAI GTATAC 1 cut(s) 773
BssT1I CCWWGG 1 cut(s) 388
Bst1107I GTATAC 1 cut(s) 773
Bst4CI ACNGT 5 cut(s) 826, 870, 899, 1017, 1505
BstAPI GCANNNNNTGC 2 cut(s) 1505, 1943
BstBAI YACGTR 1 cut(s) 1784
BstEII GGTNACC 1 cut(s) 82
BstENI CCTNNNNNAGG 2 cut(s) 1266, 1482
BstF5I GGATG 4 cut(s) 171, 812, 1720, 1793
BstFNI CGCG 1 cut(s) 192
BstH2I RGCGCY 1 cut(s) 274
BstHHI GCGC 4 cut(s) 192, 194, 273, 1660
BstKTI GATC 5 cut(s) 369, 555, 1123, 1366, 1442
BstMAI GTCTC 1 cut(s) 449
BstMBI GATC 5 cut(s) 366, 552, 1120, 1363, 1439
BstPI GGTNACC 1 cut(s) 82
BstSFI CTRYAG 4 cut(s) 142, 1380, 1809, 1911
BstSLI GKGCMC 3 cut(s) 33, 1783, 1852
BstUI CGCG 1 cut(s) 192
BstX2I RGATCY 1 cut(s) 1439
BstXI CCANNNNNNTGG 2 cut(s) 871, 1163
BstYI RGATCY 1 cut(s) 1439
BstZ17I GTATAC 1 cut(s) 773
BsuI GTATCC 1 cut(s) 1910
BsuRI GGCC 6 cut(s) 5, 31, 258, 1254, 1347, 1491
BtgZI GCGATG 2 cut(s) 91, 102
BtrI CACGTC 2 cut(s) 138, 953
BtsCI GGATG 4 cut(s) 171, 812, 1720, 1793
BtsIMutI CAGTG 2 cut(s) 960, 1510
BveI ACCTGC 4 cut(s) 1151, 1363, 1624, 1870
CfoI GCGC 4 cut(s) 192, 194, 273, 1660
Cfr10I RCCGGY 3 cut(s) 86, 245, 1090
Cfr13I GGNCC 8 cut(s) 29, 30, 629, 980, 1214, 1489, 1634, 1832
CsiI ACCWGGT 1 cut(s) 997
Csp6I GTAC 2 cut(s) 759, 827
CviAII CATG 2 cut(s) 556, 1370
CviQI GTAC 2 cut(s) 759, 827
DpnI GATC 5 cut(s) 368, 554, 1122, 1365, 1441
DpnII GATC 5 cut(s) 366, 552, 1120, 1363, 1439
EaeI YGGCCR 3 cut(s) 3, 1252, 1345
EciI GGCGGA 2 cut(s) 147, 1533
Eco130I CCWWGG 1 cut(s) 388
Eco24I GRGCYC 2 cut(s) 33, 973
Eco32I GATATC 2 cut(s) 1106, 1319
Eco47I GGWCC 5 cut(s) 629, 980, 1214, 1634, 1832
Eco57I CTGAAG 3 cut(s) 304, 455, 1968
Eco72I CACGTG 1 cut(s) 1784
Eco88I CYCGRG 2 cut(s) 507, 1968
Eco91I GGTNACC 1 cut(s) 82
EcoNI CCTNNNNNAGG 2 cut(s) 1266, 1482
EcoO65I GGTNACC 1 cut(s) 82
EcoRV GATATC 2 cut(s) 1106, 1319
EcoT14I CCWWGG 1 cut(s) 388
EcoT22I ATGCAT 1 cut(s) 1057
EcoT38I GRGCYC 2 cut(s) 33, 973
ErhI CCWWGG 1 cut(s) 388
FaeI CATG 2 cut(s) 559, 1373
FaqI GGGAC 3 cut(s) 116, 1618, 1818
FatI CATG 2 cut(s) 555, 1369
FauI CCCGC 2 cut(s) 83, 1540
FauNDI CATATG 2 cut(s) 1630, 1978
FblI GTMKAC 3 cut(s) 165, 772, 1556
FokI GGATG 4 cut(s) 158, 799, 1707, 1780
FriOI GRGCYC 2 cut(s) 33, 973
FspBI CTAG 7 cut(s) 276, 540, 756, 843, 975, 1239, 1521
GlaI GCGC 4 cut(s) 191, 193, 272, 1659
GsaI CCCAGC 2 cut(s) 970, 1412
GsuI CTGGAG 7 cut(s) 504, 549, 687, 942, 1398, 1467, 1713
HaeII RGCGCY 1 cut(s) 274
HaeIII GGCC 6 cut(s) 5, 31, 258, 1254, 1347, 1491
HapII CCGG 9 cut(s) 27, 39, 87, 246, 306, 801, 1020, 1074, 1091
HhaI GCGC 4 cut(s) 192, 194, 273, 1660
Hin1II CATG 2 cut(s) 559, 1373
Hin6I GCGC 4 cut(s) 190, 192, 271, 1658
HinP1I GCGC 4 cut(s) 190, 192, 271, 1658
HincII GTYRAC 4 cut(s) 166, 654, 1557, 1706
HindII GTYRAC 4 cut(s) 166, 654, 1557, 1706
HpaI GTTAAC 1 cut(s) 654
HpaII CCGG 9 cut(s) 27, 39, 87, 246, 306, 801, 1020, 1074, 1091
HphI GGTGA 7 cut(s) 76, 320, 464, 790, 815, 886, 1671
Hpy188I TCNGA 2 cut(s) 337, 817
Hpy188III TCNNGA 8 cut(s) 197, 483, 566, 645, 1020, 1301, 1415, 1755
Hpy99I CGWCG 4 cut(s) 11, 167, 170, 367
HpyAV CCTTC 4 cut(s) 642, 1074, 1761, 1943
HpyCH4III ACNGT 5 cut(s) 826, 870, 899, 1017, 1505
HpyCH4IV ACGT 3 cut(s) 137, 952, 1783
HpySE526I ACGT 3 cut(s) 137, 952, 1783
Hsp92II CATG 2 cut(s) 559, 1373
HspAI GCGC 4 cut(s) 190, 192, 271, 1658
Kpn2I TCCGGA 1 cut(s) 1019
KroI GCCGGC 1 cut(s) 245
KroNI GCCGGC 1 cut(s) 247
KspAI GTTAAC 1 cut(s) 654
Kzo9I GATC 5 cut(s) 366, 552, 1120, 1363, 1439
LweI GCATC 7 cut(s) 328, 502, 508, 799, 1064, 1103, 1729
MabI ACCWGGT 1 cut(s) 997
MaeI CTAG 7 cut(s) 276, 540, 756, 843, 975, 1239, 1521
MaeII ACGT 3 cut(s) 137, 952, 1783
MaeIII GTNAC 5 cut(s) 82, 308, 502, 1241, 1677
MalI GATC 5 cut(s) 368, 554, 1122, 1365, 1441
MboI GATC 5 cut(s) 366, 552, 1120, 1363, 1439
MboII GAAGA 2 cut(s) 461, 785
MfeI CAATTG 1 cut(s) 1114
MflI RGATCY 1 cut(s) 1439
MhlI GDGCHC 7 cut(s) 33, 973, 1651, 1783, 1789, 1852, 2002
MlsI TGGCCA 2 cut(s) 1254, 1347
MluCI AATT 7 cut(s) 529, 573, 690, 717, 852, 1114, 1246
MluNI TGGCCA 2 cut(s) 1254, 1347
MlyI GAGTC 4 cut(s) 119, 1552, 1600, 2040
Mox20I TGGCCA 2 cut(s) 1254, 1347
Mph1103I ATGCAT 1 cut(s) 1057
MroI TCCGGA 1 cut(s) 1019
MroNI GCCGGC 1 cut(s) 245
MscI TGGCCA 2 cut(s) 1254, 1347
MseI TTAA 4 cut(s) 462, 528, 653, 741
Msp20I TGGCCA 2 cut(s) 1254, 1347
MspA1I CMGCKG 4 cut(s) 1130, 1229, 1715, 1814
MspI CCGG 9 cut(s) 27, 39, 87, 246, 306, 801, 1020, 1074, 1091
MunI CAATTG 1 cut(s) 1114
Mva1269I GAATGC 1 cut(s) 1581
MvnI CGCG 1 cut(s) 192
NaeI GCCGGC 1 cut(s) 247
NciI CCSGG 3 cut(s) 28, 801, 1074
NdeI CATATG 2 cut(s) 1630, 1978
NdeII GATC 5 cut(s) 366, 552, 1120, 1363, 1439
NgoMIV GCCGGC 1 cut(s) 245
NlaIII CATG 2 cut(s) 559, 1373
NlaIV GGNNCC 9 cut(s) 31, 66, 386, 490, 972, 1326, 1490, 1834, 1884
NmuCI GTSAC 3 cut(s) 82, 308, 1677
NsiI ATGCAT 1 cut(s) 1057
PaeR7I CTCGAG 1 cut(s) 1968
PaqCI CACCTGC 4 cut(s) 1151, 1363, 1624, 1870
PauI GCGCGC 1 cut(s) 190
PctI GAATGC 1 cut(s) 1581
PdiI GCCGGC 1 cut(s) 247
PfeI GAWTC 8 cut(s) 35, 263, 302, 496, 620, 781, 1451, 1772
PflFI GACNNNGTC 1 cut(s) 128
PflMI CCANNNNNTGG 7 cut(s) 966, 1004, 1116, 1571, 1754, 1844, 1874
PfoI TCCNGGA 1 cut(s) 1690
PleI GAGTC 4 cut(s) 119, 1552, 1600, 2039
PmaCI CACGTG 1 cut(s) 1784
PmlI CACGTG 1 cut(s) 1784
PpsI GAGTC 4 cut(s) 119, 1552, 1600, 2039
Ppu21I YACGTR 1 cut(s) 1784
PspCI CACGTG 1 cut(s) 1784
PspEI GGTNACC 1 cut(s) 82
PspFI CCCAGC 2 cut(s) 966, 1408
PspN4I GGNNCC 9 cut(s) 31, 66, 386, 490, 972, 1326, 1490, 1834, 1884
PspOMI GGGCCC 1 cut(s) 29
PspPI GGNCC 8 cut(s) 29, 30, 629, 980, 1214, 1489, 1634, 1832
PspXI VCTCGAGB 1 cut(s) 1968
PstI CTGCAG 2 cut(s) 1384, 1915
PsuI RGATCY 1 cut(s) 1439
PsyI GACNNNGTC 1 cut(s) 128
PteI GCGCGC 1 cut(s) 190
PvuII CAGCTG 2 cut(s) 1130, 1715
RsaI GTAC 2 cut(s) 760, 828
RsaNI GTAC 2 cut(s) 759, 827
SalI GTCGAC 2 cut(s) 164, 1555
SaqAI TTAA 4 cut(s) 462, 528, 653, 741
Sau3AI GATC 5 cut(s) 366, 552, 1120, 1363, 1439
Sau96I GGNCC 8 cut(s) 29, 30, 629, 980, 1214, 1489, 1634, 1832
ScaI AGTACT 1 cut(s) 760
SchI GAGTC 4 cut(s) 119, 1552, 1600, 2040
SduI GDGCHC 7 cut(s) 33, 973, 1651, 1783, 1789, 1852, 2002
SexAI ACCWGGT 1 cut(s) 997
SfaNI GCATC 7 cut(s) 328, 502, 508, 799, 1064, 1103, 1729
SfcI CTRYAG 4 cut(s) 142, 1380, 1809, 1911
Sfr274I CTCGAG 1 cut(s) 1968
SgrDI CGTCGACG 1 cut(s) 164
SinI GGWCC 5 cut(s) 629, 980, 1214, 1634, 1832
SlaI CTCGAG 1 cut(s) 1968
SmlI CTYRAG 3 cut(s) 1299, 1653, 1968
SmoI CTYRAG 3 cut(s) 1299, 1653, 1968
SpeI ACTAGT 1 cut(s) 842
Sse9I AATT 7 cut(s) 529, 573, 690, 717, 852, 1114, 1246
SspMI CTAG 7 cut(s) 276, 540, 756, 843, 975, 1239, 1521
StyI CCWWGG 1 cut(s) 388
TaaI ACNGT 5 cut(s) 826, 870, 899, 1017, 1505
TaiI ACGT 3 cut(s) 140, 955, 1786
TaqI TCGA 7 cut(s) 165, 211, 300, 365, 646, 1556, 1969
TasI AATT 7 cut(s) 529, 573, 690, 717, 852, 1114, 1246
TatI WGTACW 1 cut(s) 758
TauI GCSGC 6 cut(s) 237, 252, 255, 258, 1261, 1817
TfiI GAWTC 8 cut(s) 35, 263, 302, 496, 620, 781, 1451, 1772
Tru1I TTAA 4 cut(s) 462, 528, 653, 741
Tru9I TTAA 4 cut(s) 462, 528, 653, 741
TscAI CASTG 2 cut(s) 967, 1510
TseFI GTSAC 3 cut(s) 82, 308, 1677
Tsp45I GTSAC 3 cut(s) 82, 308, 1677
TspDTI ATGAA 3 cut(s) 615, 701, 894
TspRI CASTG 2 cut(s) 967, 1510
Tth111I GACNNNGTC 1 cut(s) 128
Van91I CCANNNNNTGG 7 cut(s) 966, 1004, 1116, 1571, 1754, 1844, 1874
VneI GTGCAC 2 cut(s) 1779, 1848
VpaK11BI GGWCC 5 cut(s) 629, 980, 1214, 1634, 1832
XagI CCTNNNNNAGG 2 cut(s) 1266, 1482
XapI RAATTY 1 cut(s) 690
XhoI CTCGAG 1 cut(s) 1968
XmiI GTMKAC 3 cut(s) 165, 772, 1556
XspI CTAG 7 cut(s) 276, 540, 756, 843, 975, 1239, 1521
ZrmI AGTACT 1 cut(s) 760
Zsp2I ATGCAT 1 cut(s) 1057
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.