Rh6BG505200

Far upstream element-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0009579
Physical Location & Seq
Forward (+)
70327025 .. 70332624
5600 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG505200.1

Sequence Viewer

Length: 2064 bp
ATGGCCGACGAAGCACAATACTCCTCCGGGCCCGATTCCGGCAGCAATAAGCGAAAATATGAGGAGCCTACTACCCGCAGGGTCACCGGCTTCTCAGCCCCCATCATCGCCTCCTCATCGCCCGACTCTGTCCCCACGTCCTACAGCAGCGTTCCTCCGCCCGTCGACGACATCCAGCTCGCCAAGCAGCGCGCTCAGGAGATTGCTGCTCGATTGTTCAACAACGCCAGTAGCGGCGTTGCTGCCGGCGGCGGCGGCGGCCTGGAATCTAAGCGCCCTAGAGTTGATAATGGCGGTGGCTTCGATTCCGGTGACAAGGGCTTCAGCTCTATTCCCTCTGATGCCAAGCCTTACTCAGCTCCATCGTCGATCCCAGTTTCGTATGGGTTCCAAGGAGGGAGCAAAAAGATTGATGTTCCAAATGGCAGGGTTGGTGTTATTATTGGTAAACTGGGTGAGACTATTAAGTATCTTCAGGCTCAGTCTGGTGGAGCCAAGATTCAAGTTACCCGAGATGCAGATGCCGACCTTAATTGCCCAACTAGGGAGGTGGAGATCATGGGAACTCCAGAACAGATTGCAAAAGCTGAGCGTTTGATAAATGAAGTTCTTGCTGAGGCTGAATCAGGCGGTCCTGCCATAGTTTCTCGAAGGTTAACTGGACAAGCTGGAGCTGAAACATTTGTAATGAAAATTCCTAACAACAAGGTTGGTCTTGTAATTGGTAAACGAGGGGAAACTATTAAAAATATGCAAGCTAGTACTGCTGCTCGTATACAGGTGATTCCTTTGCATCTTCCCCCCGGTGATACCTCATCCGAAAGGACAGTACAGATTGATGGAACTAGTGAACAAATTGAAGCTGCCAAACAGTTGGTGAATGAAGTTATTAGTGAGAACCGTGTTAGAAATCCAGCAATGGCTGGAGGATATTCACAGCAGGGTTATCAAGCACGTCCTCCCACTGGCTGGGCTCCTAGTGGTCCTCCAATGCAACAACCAGGTTATGGATATGGACAGTCCGGAGCATATTCTGGCACAACACCTCAGTATAATGCATCTCAGCCTTCTTATCCCGGTTATCCTCCTCAACCGGCATCTGGTGGATATCCCACCAATTGGGATCAGTCAGCTGTTGCACCAACTCAGCAGACCTCCCAGGCAGGTGGTTATGATTACTATTCCCAACAACCCTCACACCAACAGCAAAACCCTGGTGGTCCTGCTGCACCAGCGGATAATGCTAGTTACAATTATGGCCAGCCGCCTATTTCAGGCTATAATCAGCAAGGACAAGGTTATCCTCAAGATGGCTATGGTGGATATCAGGCACCACCTCAATCTGGGTATGGCCAGCCACCTGCATACGATCAACATGGTTATCCTGCAGCCAACTATGGTAATGTGAGCAACCCAGCTCCAGATACCCATACTTCCTCTTATGGATCTCAGGGGGAATCAGCCCAAGCACCTCCTGTGCAGCCTGCTCCAGGGGGCCAGCAAGCATACAGTGCCACTCAACAGCCTAGCCCGAACCCCGCAAGTTATCCGCCCCAAGTGTCTACTCAGCCAGGTTATGGAATGCCCCCAACTTCTCAAACTGGTTATGGGACTCAACCACCTGCTCAATCTGCATATGGACCTGGATATGGAGCACCTCAAGCGCAAAAGCCTCCTGCTCAGTCACCCACTACTCCTGGAGGATATGGTCAACCACCAGCTGTGCATCCAGGCTATCCCCATTCTCAGCCTCCACCTTCTGGATATGCTCAGCCTGATTCTGGTGCACGTGCTCCACCATCCAGTTATGGTTCTACAGCGGCTCAGGCAGGCTATGGTCCCCCATCTTATGGTGCACCGCCATCTGGTCAGCCAGGTTATGGGCAGGTGCCACCCTACAATACATCTTATGGTGCTGCAGGATACACACAGCCTCCTCCTGCATATTCTGCTGAAGGAGCGAATGGAAACACTCGAGGTGCATATGATGGTGCTGGTGCTGGTGCTCCTGCTTCACAGACTGCTCAGCAAAGTGGAGTCGCCAAAACTTCCCCACAGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001505 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006417 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010033 GO:0010468 GO:0010494 GO:0010556 GO:0010558 GO:0010586 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010984 GO:0010985 GO:0010988 GO:0010989 GO:0016070 GO:0016071 GO:0017091 GO:0017148 GO:0019219 GO:0019222 GO:0019439 GO:0030425 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032991 GO:0034097 GO:0034248 GO:0034249 GO:0034641 GO:0034655 GO:0034660 GO:0035770 GO:0035925 GO:0036464 GO:0036477 GO:0042221 GO:0042995 GO:0043005 GO:0043025 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043487 GO:0043488 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044297 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044463 GO:0044464 GO:0045019 GO:0045428 GO:0045935 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050779 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0061013 GO:0061014 GO:0061157 GO:0061158 GO:0065007 GO:0065008 GO:0070013 GO:0070887 GO:0071310 GO:0071345 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097447 GO:0097458 GO:0120025 GO:0120038 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1903311 GO:1903313 GO:1903426 GO:1903427 GO:1904406 GO:1990904 GO:2000112 GO:2000113 GO:2000377 GO:2000378 GO:2000628
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KH_1

Protein Analysis

687

Amino Acids

70.55

Weight (kDa)

5.78

Isoelectric Point (pI)

54.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KH_1 PF00013 135 - 202 2.4e-17 KH domain
KH_1 PF00013 227 - 295 1.3e-18 KH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 4 cut(s) 1154, 1369, 1630, 1876
Acc36I ACCTGC 4 cut(s) 1154, 1369, 1630, 1876
AccB1I GGYRCC 2 cut(s) 1330, 1888
AccB7I CCANNNNNTGG 7 cut(s) 969, 1007, 1119, 1577, 1760, 1850, 1880
AccI GTMKAC 3 cut(s) 165, 775, 1562
AccII CGCG 1 cut(s) 192
AccIII TCCGGA 1 cut(s) 1022
AclWI GGATC 3 cut(s) 364, 1131, 1453
AcoI YGGCCR 3 cut(s) 3, 1258, 1351
AcsI RAATTY 1 cut(s) 693
AcuI CTGAAG 3 cut(s) 307, 458, 1974
AcvI CACGTG 1 cut(s) 1790
AfaI GTAC 2 cut(s) 763, 831
AgsI TTSAA 3 cut(s) 220, 503, 860
AhlI ACTAGT 1 cut(s) 845
AjiI CACGTC 2 cut(s) 138, 956
Alw21I GWGCWC 5 cut(s) 1657, 1789, 1795, 1858, 2008
Alw26I GTCTC 1 cut(s) 452
Alw44I GTGCAC 2 cut(s) 1785, 1854
AlwI GGATC 3 cut(s) 364, 1131, 1453
Ama87I CYCGRG 2 cut(s) 510, 1974
Aor13HI TCCGGA 1 cut(s) 1022
AoxI GGCC 6 cut(s) 3, 29, 259, 1258, 1351, 1495
ApaI GGGCCC 1 cut(s) 33
ApaLI GTGCAC 2 cut(s) 1785, 1854
ApoI RAATTY 1 cut(s) 693
AspLEI GCGC 4 cut(s) 192, 194, 276, 1666
AspS9I GGNCC 8 cut(s) 29, 30, 632, 983, 1220, 1495, 1640, 1838
AsuC2I CCSGG 3 cut(s) 28, 804, 1077
AsuHPI GGTGA 7 cut(s) 76, 323, 467, 793, 818, 889, 1677
AvaI CYCGRG 2 cut(s) 510, 1974
AvaII GGWCC 5 cut(s) 632, 983, 1220, 1640, 1838
BaeGI GKGCMC 3 cut(s) 33, 1789, 1858
BalI TGGCCA 2 cut(s) 1260, 1353
BanI GGYRCC 2 cut(s) 1330, 1888
BanII GRGCYC 2 cut(s) 33, 976
BbrPI CACGTG 1 cut(s) 1790
Bbv12I GWGCWC 5 cut(s) 1657, 1789, 1795, 1858, 2008
BbvCI CCTCAGC 1 cut(s) 615
BccI CCATC 8 cut(s) 110, 370, 833, 1304, 1807, 1852, 1870, 1982
BciVI GTATCC 1 cut(s) 1916
BcnI CCSGG 3 cut(s) 28, 804, 1077
BcoDI GTCTC 1 cut(s) 452
BcuI ACTAGT 1 cut(s) 845
BfaI CTAG 7 cut(s) 279, 543, 759, 846, 978, 1245, 1527
BfmI CTRYAG 4 cut(s) 142, 1386, 1815, 1917
BfoI RGCGCY 1 cut(s) 277
BfuAI ACCTGC 4 cut(s) 1154, 1369, 1630, 1876
BfuI GTATCC 1 cut(s) 1916
BlpI GCTNAGC 3 cut(s) 588, 1770, 2025
BmcAI AGTACT 1 cut(s) 763
Bme18I GGWCC 5 cut(s) 632, 983, 1220, 1640, 1838
BmeT110I CYCGRG 2 cut(s) 510, 1974
BmgBI CACGTC 2 cut(s) 138, 956
BmgT120I GGNCC 8 cut(s) 29, 30, 632, 983, 1220, 1495, 1640, 1838
BmiI GGNNCC 9 cut(s) 31, 66, 389, 493, 975, 1332, 1496, 1840, 1890
BmrI ACTGGG 2 cut(s) 368, 461
BmsI GCATC 7 cut(s) 331, 505, 511, 802, 1067, 1106, 1735
BmuI ACTGGG 2 cut(s) 368, 461
BpmI CTGGAG 6 cut(s) 552, 690, 945, 1404, 1473, 1719
Bpu10I CCTNAGC 3 cut(s) 195, 615, 1824
Bpu1102I GCTNAGC 3 cut(s) 588, 1770, 2025
BpuEI CTTGAG 2 cut(s) 1290, 1644
BpuMI CCSGG 3 cut(s) 28, 804, 1077
BsaAI YACGTR 1 cut(s) 1790
BsaJI CCNNGG 5 cut(s) 391, 802, 1158, 1213, 1490
BsaWI WCCGGW 2 cut(s) 308, 1022
BsaXI ACNNNNNCTCC 2 cut(s) 1918, 1948
Bse118I RCCGGY 3 cut(s) 86, 245, 1093
Bse1I ACTGG 7 cut(s) 228, 374, 456, 664, 970, 1606, 1803
Bse3DI GCAATG 1 cut(s) 924
BseAI TCCGGA 1 cut(s) 1022
BseDI CCNNGG 5 cut(s) 391, 802, 1158, 1213, 1490
BseGI GGATG 4 cut(s) 171, 815, 1726, 1799
BseMI GCAATG 1 cut(s) 924
BseMII CTCAG 4 cut(s) 108, 209, 369, 494
BseNI ACTGG 7 cut(s) 228, 374, 456, 664, 970, 1606, 1803
BsePI GCGCGC 1 cut(s) 190
BseRI GAGGAG 5 cut(s) 13, 77, 103, 1077, 1926
BseSI GKGCMC 3 cut(s) 33, 1789, 1858
BseYI CCCAGC 2 cut(s) 969, 1414
BsgI GTGCAG 2 cut(s) 1212, 1499
Bsh1236I CGCG 1 cut(s) 192
BshFI GGCC 6 cut(s) 5, 31, 261, 1260, 1353, 1497
BshNI GGYRCC 2 cut(s) 1330, 1888
BsiHKAI GWGCWC 5 cut(s) 1657, 1789, 1795, 1858, 2008
BsiHKCI CYCGRG 2 cut(s) 510, 1974
BsiSI CCGG 9 cut(s) 27, 39, 87, 246, 309, 804, 1023, 1077, 1094
BslFI GGGAC 3 cut(s) 116, 1624, 1824
BsmAI GTCTC 1 cut(s) 452
BsmFI GGGAC 3 cut(s) 116, 1624, 1824
BsmI GAATGC 1 cut(s) 1587
BsnI GGCC 6 cut(s) 5, 31, 261, 1260, 1353, 1497
BsoBI CYCGRG 2 cut(s) 510, 1974
Bsp120I GGGCCC 1 cut(s) 29
Bsp1286I GDGCHC 7 cut(s) 33, 976, 1657, 1789, 1795, 1858, 2008
Bsp13I TCCGGA 1 cut(s) 1022
Bsp143I GATC 5 cut(s) 369, 555, 1123, 1369, 1445
Bsp1720I GCTNAGC 3 cut(s) 588, 1770, 2025
BspANI GGCC 6 cut(s) 5, 31, 261, 1260, 1353, 1497
BspEI TCCGGA 1 cut(s) 1022
BspFNI CGCG 1 cut(s) 192
BspLI GGNNCC 9 cut(s) 31, 66, 389, 493, 975, 1332, 1496, 1840, 1890
BspMAI CTGCAG 2 cut(s) 1390, 1921
BspMI ACCTGC 4 cut(s) 1154, 1369, 1630, 1876
BspPI GGATC 3 cut(s) 364, 1131, 1453
BspT107I GGYRCC 2 cut(s) 1330, 1888
BsrDI GCAATG 1 cut(s) 924
BsrFI RCCGGY 3 cut(s) 86, 245, 1093
BsrI ACTGG 7 cut(s) 228, 374, 456, 664, 970, 1606, 1803
BssAI RCCGGY 3 cut(s) 86, 245, 1093
BssECI CCNNGG 5 cut(s) 391, 802, 1158, 1213, 1490
BssHII GCGCGC 1 cut(s) 190
BssMI GATC 5 cut(s) 369, 555, 1123, 1369, 1445
BssNAI GTATAC 1 cut(s) 776
BssT1I CCWWGG 1 cut(s) 391
Bst1107I GTATAC 1 cut(s) 776
Bst4CI ACNGT 5 cut(s) 829, 873, 902, 1020, 1511
BstAPI GCANNNNNTGC 2 cut(s) 1511, 1949
BstBAI YACGTR 1 cut(s) 1790
BstEII GGTNACC 1 cut(s) 82
BstENI CCTNNNNNAGG 2 cut(s) 1272, 1488
BstF5I GGATG 4 cut(s) 171, 815, 1726, 1799
BstFNI CGCG 1 cut(s) 192
BstH2I RGCGCY 1 cut(s) 277
BstHHI GCGC 4 cut(s) 192, 194, 276, 1666
BstKTI GATC 5 cut(s) 372, 558, 1126, 1372, 1448
BstMAI GTCTC 1 cut(s) 452
BstMBI GATC 5 cut(s) 369, 555, 1123, 1369, 1445
BstPI GGTNACC 1 cut(s) 82
BstSFI CTRYAG 4 cut(s) 142, 1386, 1815, 1917
BstSLI GKGCMC 3 cut(s) 33, 1789, 1858
BstUI CGCG 1 cut(s) 192
BstX2I RGATCY 1 cut(s) 1445
BstXI CCANNNNNNTGG 2 cut(s) 874, 1166
BstYI RGATCY 1 cut(s) 1445
BstZ17I GTATAC 1 cut(s) 776
BsuI GTATCC 1 cut(s) 1916
BsuRI GGCC 6 cut(s) 5, 31, 261, 1260, 1353, 1497
BtgZI GCGATG 2 cut(s) 91, 102
BtrI CACGTC 2 cut(s) 138, 956
BtsCI GGATG 4 cut(s) 171, 815, 1726, 1799
BtsIMutI CAGTG 2 cut(s) 963, 1516
BveI ACCTGC 4 cut(s) 1154, 1369, 1630, 1876
CfoI GCGC 4 cut(s) 192, 194, 276, 1666
Cfr10I RCCGGY 3 cut(s) 86, 245, 1093
Cfr13I GGNCC 8 cut(s) 29, 30, 632, 983, 1220, 1495, 1640, 1838
CsiI ACCWGGT 1 cut(s) 1000
Csp6I GTAC 2 cut(s) 762, 830
CviAII CATG 2 cut(s) 559, 1376
CviQI GTAC 2 cut(s) 762, 830
DpnI GATC 5 cut(s) 371, 557, 1125, 1371, 1447
DpnII GATC 5 cut(s) 369, 555, 1123, 1369, 1445
EaeI YGGCCR 3 cut(s) 3, 1258, 1351
EciI GGCGGA 2 cut(s) 147, 1539
Eco130I CCWWGG 1 cut(s) 391
Eco24I GRGCYC 2 cut(s) 33, 976
Eco32I GATATC 2 cut(s) 1109, 1325
Eco47I GGWCC 5 cut(s) 632, 983, 1220, 1640, 1838
Eco57I CTGAAG 3 cut(s) 307, 458, 1974
Eco72I CACGTG 1 cut(s) 1790
Eco88I CYCGRG 2 cut(s) 510, 1974
Eco91I GGTNACC 1 cut(s) 82
EcoNI CCTNNNNNAGG 2 cut(s) 1272, 1488
EcoO65I GGTNACC 1 cut(s) 82
EcoRV GATATC 2 cut(s) 1109, 1325
EcoT14I CCWWGG 1 cut(s) 391
EcoT22I ATGCAT 1 cut(s) 1060
EcoT38I GRGCYC 2 cut(s) 33, 976
ErhI CCWWGG 1 cut(s) 391
FaeI CATG 2 cut(s) 562, 1379
FaqI GGGAC 3 cut(s) 116, 1624, 1824
FatI CATG 2 cut(s) 558, 1375
FauI CCCGC 2 cut(s) 83, 1546
FauNDI CATATG 2 cut(s) 1636, 1984
FblI GTMKAC 3 cut(s) 165, 775, 1562
FokI GGATG 4 cut(s) 158, 802, 1713, 1786
FriOI GRGCYC 2 cut(s) 33, 976
FspBI CTAG 7 cut(s) 279, 543, 759, 846, 978, 1245, 1527
GlaI GCGC 4 cut(s) 191, 193, 275, 1665
GsaI CCCAGC 2 cut(s) 973, 1418
GsuI CTGGAG 6 cut(s) 552, 690, 945, 1404, 1473, 1719
HaeII RGCGCY 1 cut(s) 277
HaeIII GGCC 6 cut(s) 5, 31, 261, 1260, 1353, 1497
HapII CCGG 9 cut(s) 27, 39, 87, 246, 309, 804, 1023, 1077, 1094
HhaI GCGC 4 cut(s) 192, 194, 276, 1666
Hin1II CATG 2 cut(s) 562, 1379
Hin6I GCGC 4 cut(s) 190, 192, 274, 1664
HinP1I GCGC 4 cut(s) 190, 192, 274, 1664
HincII GTYRAC 3 cut(s) 166, 657, 1712
HindII GTYRAC 3 cut(s) 166, 657, 1712
HpaI GTTAAC 1 cut(s) 657
HpaII CCGG 9 cut(s) 27, 39, 87, 246, 309, 804, 1023, 1077, 1094
HphI GGTGA 7 cut(s) 76, 323, 467, 793, 818, 889, 1677
Hpy188I TCNGA 2 cut(s) 340, 820
Hpy188III TCNNGA 7 cut(s) 197, 569, 648, 1023, 1307, 1421, 1761
Hpy99I CGWCG 4 cut(s) 11, 167, 170, 370
HpyAV CCTTC 4 cut(s) 645, 1077, 1767, 1949
HpyCH4III ACNGT 5 cut(s) 829, 873, 902, 1020, 1511
HpyCH4IV ACGT 3 cut(s) 137, 955, 1789
HpySE526I ACGT 3 cut(s) 137, 955, 1789
Hsp92II CATG 2 cut(s) 562, 1379
HspAI GCGC 4 cut(s) 190, 192, 274, 1664
Kpn2I TCCGGA 1 cut(s) 1022
KroI GCCGGC 1 cut(s) 245
KroNI GCCGGC 1 cut(s) 247
KspAI GTTAAC 1 cut(s) 657
Kzo9I GATC 5 cut(s) 369, 555, 1123, 1369, 1445
LweI GCATC 7 cut(s) 331, 505, 511, 802, 1067, 1106, 1735
MabI ACCWGGT 1 cut(s) 1000
MaeI CTAG 7 cut(s) 279, 543, 759, 846, 978, 1245, 1527
MaeII ACGT 3 cut(s) 137, 955, 1789
MaeIII GTNAC 5 cut(s) 82, 311, 505, 1247, 1683
MalI GATC 5 cut(s) 371, 557, 1125, 1371, 1447
MboI GATC 5 cut(s) 369, 555, 1123, 1369, 1445
MboII GAAGA 2 cut(s) 464, 788
MfeI CAATTG 1 cut(s) 1117
MflI RGATCY 1 cut(s) 1445
MhlI GDGCHC 7 cut(s) 33, 976, 1657, 1789, 1795, 1858, 2008
MlsI TGGCCA 2 cut(s) 1260, 1353
MluCI AATT 6 cut(s) 532, 693, 720, 855, 1117, 1252
MluNI TGGCCA 2 cut(s) 1260, 1353
MlyI GAGTC 3 cut(s) 119, 1606, 2046
Mox20I TGGCCA 2 cut(s) 1260, 1353
Mph1103I ATGCAT 1 cut(s) 1060
MroI TCCGGA 1 cut(s) 1022
MroNI GCCGGC 1 cut(s) 245
MscI TGGCCA 2 cut(s) 1260, 1353
MseI TTAA 4 cut(s) 465, 531, 656, 744
Msp20I TGGCCA 2 cut(s) 1260, 1353
MspA1I CMGCKG 4 cut(s) 1133, 1235, 1721, 1820
MspI CCGG 9 cut(s) 27, 39, 87, 246, 309, 804, 1023, 1077, 1094
MunI CAATTG 1 cut(s) 1117
Mva1269I GAATGC 1 cut(s) 1587
MvnI CGCG 1 cut(s) 192
NaeI GCCGGC 1 cut(s) 247
NciI CCSGG 3 cut(s) 28, 804, 1077
NdeI CATATG 2 cut(s) 1636, 1984
NdeII GATC 5 cut(s) 369, 555, 1123, 1369, 1445
NgoMIV GCCGGC 1 cut(s) 245
NlaIII CATG 2 cut(s) 562, 1379
NlaIV GGNNCC 9 cut(s) 31, 66, 389, 493, 975, 1332, 1496, 1840, 1890
NmuCI GTSAC 3 cut(s) 82, 311, 1683
NsiI ATGCAT 1 cut(s) 1060
PaeR7I CTCGAG 1 cut(s) 1974
PaqCI CACCTGC 4 cut(s) 1154, 1369, 1630, 1876
PauI GCGCGC 1 cut(s) 190
PctI GAATGC 1 cut(s) 1587
PdiI GCCGGC 1 cut(s) 247
PfeI GAWTC 8 cut(s) 35, 266, 305, 499, 623, 784, 1457, 1778
PflFI GACNNNGTC 1 cut(s) 128
PflMI CCANNNNNTGG 7 cut(s) 969, 1007, 1119, 1577, 1760, 1850, 1880
PfoI TCCNGGA 1 cut(s) 1696
PleI GAGTC 3 cut(s) 119, 1606, 2045
PmaCI CACGTG 1 cut(s) 1790
PmlI CACGTG 1 cut(s) 1790
PpsI GAGTC 3 cut(s) 119, 1606, 2045
Ppu21I YACGTR 1 cut(s) 1790
PspCI CACGTG 1 cut(s) 1790
PspEI GGTNACC 1 cut(s) 82
PspFI CCCAGC 2 cut(s) 969, 1414
PspN4I GGNNCC 9 cut(s) 31, 66, 389, 493, 975, 1332, 1496, 1840, 1890
PspOMI GGGCCC 1 cut(s) 29
PspPI GGNCC 8 cut(s) 29, 30, 632, 983, 1220, 1495, 1640, 1838
PspXI VCTCGAGB 1 cut(s) 1974
PstI CTGCAG 2 cut(s) 1390, 1921
PsuI RGATCY 1 cut(s) 1445
PsyI GACNNNGTC 1 cut(s) 128
PteI GCGCGC 1 cut(s) 190
PvuII CAGCTG 2 cut(s) 1133, 1721
RsaI GTAC 2 cut(s) 763, 831
RsaNI GTAC 2 cut(s) 762, 830
SalI GTCGAC 1 cut(s) 164
SaqAI TTAA 4 cut(s) 465, 531, 656, 744
Sau3AI GATC 5 cut(s) 369, 555, 1123, 1369, 1445
Sau96I GGNCC 8 cut(s) 29, 30, 632, 983, 1220, 1495, 1640, 1838
ScaI AGTACT 1 cut(s) 763
SchI GAGTC 3 cut(s) 119, 1606, 2046
SduI GDGCHC 7 cut(s) 33, 976, 1657, 1789, 1795, 1858, 2008
SexAI ACCWGGT 1 cut(s) 1000
SfaNI GCATC 7 cut(s) 331, 505, 511, 802, 1067, 1106, 1735
SfcI CTRYAG 4 cut(s) 142, 1386, 1815, 1917
Sfr274I CTCGAG 1 cut(s) 1974
SgrDI CGTCGACG 1 cut(s) 164
SinI GGWCC 5 cut(s) 632, 983, 1220, 1640, 1838
SlaI CTCGAG 1 cut(s) 1974
SmlI CTYRAG 3 cut(s) 1305, 1659, 1974
SmoI CTYRAG 3 cut(s) 1305, 1659, 1974
SpeI ACTAGT 1 cut(s) 845
Sse9I AATT 6 cut(s) 532, 693, 720, 855, 1117, 1252
SspMI CTAG 7 cut(s) 279, 543, 759, 846, 978, 1245, 1527
StyI CCWWGG 1 cut(s) 391
TaaI ACNGT 5 cut(s) 829, 873, 902, 1020, 1511
TaiI ACGT 3 cut(s) 140, 958, 1792
TaqI TCGA 6 cut(s) 165, 211, 303, 368, 649, 1975
TasI AATT 6 cut(s) 532, 693, 720, 855, 1117, 1252
TatI WGTACW 2 cut(s) 761, 829
TauI GCSGC 7 cut(s) 237, 252, 255, 258, 261, 1267, 1823
TfiI GAWTC 8 cut(s) 35, 266, 305, 499, 623, 784, 1457, 1778
Tru1I TTAA 4 cut(s) 465, 531, 656, 744
Tru9I TTAA 4 cut(s) 465, 531, 656, 744
TscAI CASTG 2 cut(s) 970, 1516
TseFI GTSAC 3 cut(s) 82, 311, 1683
Tsp45I GTSAC 3 cut(s) 82, 311, 1683
TspDTI ATGAA 3 cut(s) 618, 704, 897
TspRI CASTG 2 cut(s) 970, 1516
Tth111I GACNNNGTC 1 cut(s) 128
Van91I CCANNNNNTGG 7 cut(s) 969, 1007, 1119, 1577, 1760, 1850, 1880
VneI GTGCAC 2 cut(s) 1785, 1854
VpaK11BI GGWCC 5 cut(s) 632, 983, 1220, 1640, 1838
XagI CCTNNNNNAGG 2 cut(s) 1272, 1488
XapI RAATTY 1 cut(s) 693
XhoI CTCGAG 1 cut(s) 1974
XmiI GTMKAC 3 cut(s) 165, 775, 1562
XspI CTAG 7 cut(s) 279, 543, 759, 846, 978, 1245, 1527
ZrmI AGTACT 1 cut(s) 763
Zsp2I ATGCAT 1 cut(s) 1060
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.