Prupe.1G414200_v2.0.a1

Far upstream element-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0009579
Physical Location & Seq
Forward (+)
36056967 .. 36063342
6376 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G414200.1

Sequence Viewer

Length: 2064 bp
ATGGCCGACGAAGCACAATACTCCTCTGGTCCCGATTCGGGGAACAACAAGCGCAAATACGAAGAGCAAACGACGCCGCCTCCGCGTAGAGCCACTGGCTTCTCAGCCCCCATCACGTCCTCATCGCCCGATTCTGCACCTCCGTCCTACAGCAACGTTCCTCCGCCAGTTGATGACATTCAGGTGGCCAAGCAGCGCGCGCAGGAGATCGCAGCTCGATTGTTCAACAACGCCAGTGGTGGTGTTGCTGCTGGTGGCCTTGAGGCTAAGCGCCCTAGGGTTGAGAATGGCTTTGATTCCATTGACAAGGGCTTTAGCTCTGCTCCACCTGATTTGAAGCCTCACTTGTCAAACACAGCTCCTTCATCGATCCCTGTATCGTATGGTAGCTTCCAGGGCTCAAGCAAAAAGATTGATGTTCCAAATGGAAGGGTTGGTGTTATTATTGGTAAAGGTGGTGAGACTATCAAGTATTTACAGACTCAGTCTGGAGCCAAGATTCAAGTTACCCGAGATGGTGATGCGGACCTCAGTGCTCCAACTAGGATGGTGGAGCTCATGGGTACTCCAGAGCAGATCGCAAAGGCTGAGCATTTGATAAATGAAGTTCTGGCTGAGGCTGAATCAGGAGGTCCTGCCATAGTTTCACGAAGGTTAACAGTACAAGCTGGTGCTGAACAATATGTTACAAAAATTCCTAACAACAAGGTTGGGCTTGTAATTGGGAAAGGAGGTGAAACGATTAAAAATATGCAAGCTAGGACTGGAGCTCGTATTCAGGTGATTCCCTTGCATCTGCCACCTGGTGACACATCAACAGAAAGGACACTACAGATTGATGGGACTAGTGAACAAATTGAAGCTGCAAAACAGTTGGTCAATGAAGTTATTAGCGAGAATCGTGTTAGAAATCCAGCAATGGCTGGAGGATACTCTCAGCAAGGTTATCAAGCGCGCCCTCCCACTGGCTGGGCTTCTGGTGGACCTCCAATGCAACAACCTGGTTATGGCTATGGACAGTCTGGAGCATATTCTGGCCCATCACCGCAGTATAATGCTGCCCAGCCTCCTTATCCAGGTTATCCCCCTCAACCAACATCTGGTGGATATCCCTCCAATTGGGACCAGTCAGCTGCTGCACCAACTCAGCAGACTTCCCAGGGAAGTGGTTATGATTACTATGGCCAGCAACAACCATCACACCAACAACAAAATCCTGGTGGTCCCGCTGCACCCGCTGACAATGCTGGTTACAATTACGGCCAGCCGCCTGTTTCAGGCTATAATCAGCAAGGACAAGGTTATCCTCAAGAAGGCTACGGTGGGTATCATGCACCACCTCAGTCTGGGTATGGTCAGCCACCATCGTATGATCAACAGCAGGGATATTCTGCAGCTGGCTATGGTAATGTGAGTAACCCAACTCAAGATGGACATACTTCCTCTTATGGATCTCAGGGGGATTCAGCCCAAGCACCACCTCCTGTTCAGCAAGGATACAGTGCAAGTCAACAGCCTAGCCCTAACCCTGCAGGTTACCCACCCCAAGGGTCTACTCAGCCAGGCTATGGAGTACCCCCAACTTCTCAAACTGGTTATGGTAGTCAACCACCAGCTCAGGCTGGATATGGAGCTGGATATGGAGCACCTCCAGCACAAAAACCTCCTGCAAATCCCGCAGTTTATGGGCAAACCACACAGTCGCCCAGCACTCCTGGAGCCTATGGTCAGCCAGCACCTGTGCAGCCAGGCTACGCCCATTCTCAGCCCCCACAATCTGGTTATGCTCAGCCAGATTCTGCTACCCGTGCCCCATCATCCGGCTATGGCGCAGCTCAGGCTGGGTATGGGCCTCCATCCTATGGTGCACCACCCGTTGGTCAGCCGGGTTACGGGCAGGCGCCACCACCTTACAATGCATCTTATGGTGCTGGATATGCACAACCTCCTGCCTACTCTGCTGATGCCAATGCAAATGGGAACACTCGCGGGACATATGATGCTGCACCTGCTTCACAGGCTGCTCAGCCAAGTGGAGTTGCCAAAACTTCCCCACAGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001505 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006417 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010033 GO:0010468 GO:0010494 GO:0010556 GO:0010558 GO:0010586 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010984 GO:0010985 GO:0010988 GO:0010989 GO:0016070 GO:0016071 GO:0017091 GO:0017148 GO:0019219 GO:0019222 GO:0019439 GO:0030425 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032991 GO:0034097 GO:0034248 GO:0034249 GO:0034641 GO:0034655 GO:0034660 GO:0035770 GO:0035925 GO:0036464 GO:0036477 GO:0042221 GO:0042995 GO:0043005 GO:0043025 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043487 GO:0043488 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044297 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044463 GO:0044464 GO:0045019 GO:0045428 GO:0045935 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050779 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0061013 GO:0061014 GO:0061157 GO:0061158 GO:0065007 GO:0065008 GO:0070013 GO:0070887 GO:0071310 GO:0071345 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097447 GO:0097458 GO:0120025 GO:0120038 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1903311 GO:1903313 GO:1903426 GO:1903427 GO:1904406 GO:1990904 GO:2000112 GO:2000113 GO:2000377 GO:2000378 GO:2000628
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KH_1

Protein Analysis

688

Amino Acids

70.69

Weight (kDa)

5.87

Isoelectric Point (pI)

54.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2017
Acc36I ACCTGC 2 cut(s) 1523, 2017
AccB1I GGYRCC 1 cut(s) 1900
AccB7I CCANNNNNTGG 6 cut(s) 969, 1100, 1568, 1778, 1862, 1877
AccI GTMKAC 1 cut(s) 1553
AccII CGCG 5 cut(s) 85, 198, 200, 955, 1989
AclI AACGTT 1 cut(s) 156
AclWI GGATC 2 cut(s) 364, 1459
AcoI YGGCCR 4 cut(s) 3, 186, 1183, 1261
AcsI RAATTY 1 cut(s) 693
AcyI GRCGYC 2 cut(s) 74, 1901
AdeI CACNNNGTG 1 cut(s) 806
AfaI GTAC 3 cut(s) 565, 663, 1575
AgsI TTSAA 4 cut(s) 226, 337, 503, 860
AhlI ACTAGT 1 cut(s) 845
AjiI CACGTC 1 cut(s) 117
AjnI CCWGG 9 cut(s) 393, 802, 1000, 1075, 1158, 1216, 1561, 1714, 1747
Alw21I GWGCWC 5 cut(s) 538, 558, 772, 1648, 1870
Alw26I GTCTC 1 cut(s) 455
Alw44I GTGCAC 1 cut(s) 1866
AlwI GGATC 2 cut(s) 364, 1459
AlwNI CAGNNNCTG 3 cut(s) 1136, 1739, 1799
Ama87I CYCGRG 1 cut(s) 510
AoxI GGCC 7 cut(s) 3, 186, 256, 1036, 1183, 1261, 1850
ApaLI GTGCAC 1 cut(s) 1866
ApoI RAATTY 1 cut(s) 693
AspA2I CCTAGG 1 cut(s) 275
AspLEI GCGC 9 cut(s) 54, 198, 200, 202, 273, 955, 957, 1832, 1903
AspS9I GGNCC 8 cut(s) 29, 526, 632, 983, 1037, 1123, 1223, 1850
AsuC2I CCSGG 1 cut(s) 1887
AsuHPI GGTGA 6 cut(s) 470, 530, 746, 793, 818, 1035
AvaI CYCGRG 1 cut(s) 510
AvaII GGWCC 6 cut(s) 29, 526, 632, 983, 1123, 1223
AvrII CCTAGG 1 cut(s) 275
BaeGI GKGCMC 2 cut(s) 1813, 1870
BalI TGGCCA 2 cut(s) 188, 1185
BanI GGYRCC 1 cut(s) 1900
BanII GRGCYC 3 cut(s) 401, 558, 772
BarI GAAGNNNNNNTAC 2 cut(s) 374, 406
Bbv12I GWGCWC 5 cut(s) 538, 558, 772, 1648, 1870
BbvCI CCTCAGC 1 cut(s) 615
BceAI ACGGC 1 cut(s) 1276
BciT130I CCWGG 9 cut(s) 395, 804, 1002, 1077, 1160, 1218, 1563, 1716, 1749
BciVI GTATCC 2 cut(s) 923, 1490
BclI TGATCA 1 cut(s) 1372
BcnI CCSGG 1 cut(s) 1887
BcoDI GTCTC 1 cut(s) 455
BcuI ACTAGT 1 cut(s) 845
BfaI CTAG 5 cut(s) 276, 543, 759, 846, 1518
BfmI CTRYAG 4 cut(s) 148, 830, 1392, 1530
BfoI RGCGCY 2 cut(s) 274, 1904
BfuAI ACCTGC 2 cut(s) 1523, 2017
BfuI GTATCC 2 cut(s) 923, 1490
BlnI CCTAGG 1 cut(s) 275
BlpI GCTNAGC 4 cut(s) 267, 588, 1788, 2025
Bme18I GGWCC 6 cut(s) 29, 526, 632, 983, 1123, 1223
BmeT110I CYCGRG 1 cut(s) 510
BmgBI CACGTC 1 cut(s) 117
BmgT120I GGNCC 8 cut(s) 29, 526, 632, 983, 1037, 1123, 1223, 1850
BmiI GGNNCC 6 cut(s) 31, 493, 1124, 1225, 1720, 1902
BmsI GCATC 5 cut(s) 511, 802, 1928, 1954, 1990
BpmI CTGGAG 7 cut(s) 510, 552, 786, 945, 1044, 1635, 1737
Bpu10I CCTNAGC 3 cut(s) 615, 1617, 1836
Bpu1102I GCTNAGC 4 cut(s) 267, 588, 1788, 2025
BpuEI CTTGAG 4 cut(s) 281, 385, 1293, 1410
BpuMI CCSGG 1 cut(s) 1887
Bsa29I ATCGAT 1 cut(s) 368
BsaHI GRCGYC 2 cut(s) 74, 1901
BsaJI CCNNGG 5 cut(s) 275, 394, 1158, 1159, 1546
BsaXI ACNNNNNCTCC 2 cut(s) 64, 94
Bse1I ACTGG 7 cut(s) 100, 167, 234, 769, 970, 1126, 1597
Bse3DI GCAATG 1 cut(s) 924
BseBI CCWGG 9 cut(s) 395, 804, 1002, 1077, 1160, 1218, 1563, 1716, 1749
BseCI ATCGAT 1 cut(s) 368
BseDI CCNNGG 5 cut(s) 275, 394, 1158, 1159, 1546
BseGI GGATG 3 cut(s) 552, 1817, 1856
BseMI GCAATG 1 cut(s) 924
BseNI ACTGG 7 cut(s) 100, 167, 234, 769, 970, 1126, 1597
BsePI GCGCGC 3 cut(s) 196, 198, 953
BseRI GAGGAG 1 cut(s) 13
BseSI GKGCMC 2 cut(s) 1813, 1870
BseYI CCCAGC 4 cut(s) 969, 1062, 1706, 1841
BsgI GTGCAG 5 cut(s) 120, 1122, 1215, 1763, 1989
Bsh1236I CGCG 5 cut(s) 85, 198, 200, 955, 1989
BshFI GGCC 7 cut(s) 5, 188, 258, 1038, 1185, 1263, 1852
BshNI GGYRCC 1 cut(s) 1900
BshVI ATCGAT 1 cut(s) 368
BsiHKAI GWGCWC 5 cut(s) 538, 558, 772, 1648, 1870
BsiHKCI CYCGRG 1 cut(s) 510
BsiSI CCGG 2 cut(s) 1821, 1886
BslFI GGGAC 5 cut(s) 15, 856, 1136, 1209, 2005
BsmAI GTCTC 1 cut(s) 455
BsmFI GGGAC 5 cut(s) 15, 856, 1136, 1209, 2005
BsnI GGCC 7 cut(s) 5, 188, 258, 1038, 1185, 1263, 1852
BsoBI CYCGRG 1 cut(s) 510
Bsp1286I GDGCHC 7 cut(s) 401, 538, 558, 772, 1648, 1813, 1870
Bsp143I GATC 5 cut(s) 207, 369, 576, 1372, 1451
Bsp1720I GCTNAGC 4 cut(s) 267, 588, 1788, 2025
BspANI GGCC 7 cut(s) 5, 188, 258, 1038, 1185, 1263, 1852
BspDI ATCGAT 1 cut(s) 368
BspFNI CGCG 5 cut(s) 85, 198, 200, 955, 1989
BspLI GGNNCC 6 cut(s) 31, 493, 1124, 1225, 1720, 1902
BspMAI CTGCAG 2 cut(s) 1396, 1534
BspMI ACCTGC 2 cut(s) 1523, 2017
BspPI GGATC 2 cut(s) 364, 1459
BspQI GCTCTTC 1 cut(s) 57
BspT107I GGYRCC 1 cut(s) 1900
BsrDI GCAATG 1 cut(s) 924
BsrI ACTGG 7 cut(s) 100, 167, 234, 769, 970, 1126, 1597
BssECI CCNNGG 5 cut(s) 275, 394, 1158, 1159, 1546
BssHII GCGCGC 3 cut(s) 196, 198, 953
BssMI GATC 5 cut(s) 207, 369, 576, 1372, 1451
BssNI GRCGYC 2 cut(s) 74, 1901
BssT1I CCWWGG 2 cut(s) 275, 1546
Bst2UI CCWGG 9 cut(s) 395, 804, 1002, 1077, 1160, 1218, 1563, 1716, 1749
Bst4CI ACNGT 6 cut(s) 661, 873, 1020, 1322, 1502, 1701
Bst6I CTCTTC 1 cut(s) 57
BstACI GRCGYC 2 cut(s) 74, 1901
BstC8I GCNNGC 9 cut(s) 198, 200, 756, 955, 1187, 1265, 1399, 1734, 1899
BstEII GGTNACC 1 cut(s) 1535
BstENI CCTNNNNNAGG 3 cut(s) 1074, 1275, 1311
BstF5I GGATG 3 cut(s) 552, 1817, 1856
BstFNI CGCG 5 cut(s) 85, 198, 200, 955, 1989
BstH2I RGCGCY 2 cut(s) 274, 1904
BstHHI GCGC 9 cut(s) 54, 198, 200, 202, 273, 955, 957, 1832, 1903
BstKTI GATC 5 cut(s) 210, 372, 579, 1375, 1454
BstMAI GTCTC 1 cut(s) 455
BstMBI GATC 5 cut(s) 207, 369, 576, 1372, 1451
BstNI CCWGG 9 cut(s) 395, 804, 1002, 1077, 1160, 1218, 1563, 1716, 1749
BstPI GGTNACC 1 cut(s) 1535
BstSFI CTRYAG 4 cut(s) 148, 830, 1392, 1530
BstSLI GKGCMC 2 cut(s) 1813, 1870
BstUI CGCG 5 cut(s) 85, 198, 200, 955, 1989
BstX2I RGATCY 1 cut(s) 1451
BstXI CCANNNNNNTGG 1 cut(s) 1166
BstYI RGATCY 1 cut(s) 1451
Bsu15I ATCGAT 1 cut(s) 368
BsuI GTATCC 2 cut(s) 923, 1490
BsuRI GGCC 7 cut(s) 5, 188, 258, 1038, 1185, 1263, 1852
BsuTUI ATCGAT 1 cut(s) 368
BtgZI GCGATG 1 cut(s) 108
BtrI CACGTC 1 cut(s) 117
BtsCI GGATG 3 cut(s) 552, 1817, 1856
BtsIMutI CAGTG 5 cut(s) 93, 241, 538, 963, 1507
BveI ACCTGC 2 cut(s) 1523, 2017
Cac8I GCNNGC 9 cut(s) 198, 200, 756, 955, 1187, 1265, 1399, 1734, 1899
CaiI CAGNNNCTG 3 cut(s) 1136, 1739, 1799
CfoI GCGC 9 cut(s) 54, 198, 200, 202, 273, 955, 957, 1832, 1903
Cfr13I GGNCC 8 cut(s) 29, 526, 632, 983, 1037, 1123, 1223, 1850
ClaI ATCGAT 1 cut(s) 368
CseI GACGC 1 cut(s) 82
CsiI ACCWGGT 2 cut(s) 802, 1000
Csp6I GTAC 3 cut(s) 564, 662, 1574
CspCI CAANNNNNGTGG 4 cut(s) 217, 252, 315, 350
CviAII CATG 2 cut(s) 559, 1331
CviQI GTAC 3 cut(s) 564, 662, 1574
DinI GGCGCC 1 cut(s) 1902
DpnI GATC 5 cut(s) 209, 371, 578, 1374, 1453
DpnII GATC 5 cut(s) 207, 369, 576, 1372, 1451
DraIII CACNNNGTG 1 cut(s) 806
EaeI YGGCCR 4 cut(s) 3, 186, 1183, 1261
Eam1104I CTCTTC 1 cut(s) 57
EarI CTCTTC 1 cut(s) 57
EciI GGCGGA 1 cut(s) 153
Ecl136II GAGCTC 2 cut(s) 556, 770
Eco130I CCWWGG 2 cut(s) 275, 1546
Eco24I GRGCYC 3 cut(s) 401, 558, 772
Eco32I GATATC 1 cut(s) 1109
Eco47I GGWCC 6 cut(s) 29, 526, 632, 983, 1123, 1223
Eco53kI GAGCTC 2 cut(s) 556, 770
Eco88I CYCGRG 1 cut(s) 510
Eco91I GGTNACC 1 cut(s) 1535
EcoICRI GAGCTC 2 cut(s) 556, 770
EcoNI CCTNNNNNAGG 3 cut(s) 1074, 1275, 1311
EcoO109I RGGNCCY 1 cut(s) 632
EcoO65I GGTNACC 1 cut(s) 1535
EcoRII CCWGG 9 cut(s) 393, 802, 1000, 1075, 1158, 1216, 1561, 1714, 1747
EcoRV GATATC 1 cut(s) 1109
EcoT14I CCWWGG 2 cut(s) 275, 1546
EcoT22I ATGCAT 1 cut(s) 1921
EcoT38I GRGCYC 3 cut(s) 401, 558, 772
EgeI GGCGCC 1 cut(s) 1902
EheI GGCGCC 1 cut(s) 1902
ErhI CCWWGG 2 cut(s) 275, 1546
FaeI CATG 2 cut(s) 562, 1334
FalI AAGNNNNNCTT 2 cut(s) 329, 361
FaqI GGGAC 5 cut(s) 15, 856, 1136, 1209, 2005
FatI CATG 2 cut(s) 558, 1330
FauI CCCGC 4 cut(s) 1234, 1243, 1684, 1982
FauNDI CATATG 1 cut(s) 1996
FbaI TGATCA 1 cut(s) 1372
FblI GTMKAC 1 cut(s) 1553
FokI GGATG 3 cut(s) 559, 1804, 1843
FriOI GRGCYC 3 cut(s) 401, 558, 772
FspBI CTAG 5 cut(s) 276, 543, 759, 846, 1518
GlaI GCGC 9 cut(s) 53, 197, 199, 201, 272, 954, 956, 1831, 1902
GsaI CCCAGC 4 cut(s) 973, 1066, 1710, 1845
GsuI CTGGAG 7 cut(s) 510, 552, 786, 945, 1044, 1635, 1737
HaeII RGCGCY 2 cut(s) 274, 1904
HaeIII GGCC 7 cut(s) 5, 188, 258, 1038, 1185, 1263, 1852
HapII CCGG 2 cut(s) 1821, 1886
HgaI GACGC 1 cut(s) 82
HhaI GCGC 9 cut(s) 54, 198, 200, 202, 273, 955, 957, 1832, 1903
Hin1I GRCGYC 2 cut(s) 74, 1901
Hin1II CATG 2 cut(s) 562, 1334
Hin6I GCGC 9 cut(s) 52, 196, 198, 200, 271, 953, 955, 1830, 1901
HinP1I GCGC 9 cut(s) 52, 196, 198, 200, 271, 953, 955, 1830, 1901
HincII GTYRAC 3 cut(s) 657, 1511, 1607
HindII GTYRAC 3 cut(s) 657, 1511, 1607
HpaI GTTAAC 1 cut(s) 657
HpaII CCGG 2 cut(s) 1821, 1886
HphI GGTGA 6 cut(s) 470, 530, 746, 793, 818, 1035
Hpy166II GTNNAC 7 cut(s) 657, 851, 983, 1511, 1554, 1607, 1868
Hpy188III TCNNGA 8 cut(s) 32, 489, 569, 627, 648, 1023, 1310, 1427
Hpy8I GTNNAC 7 cut(s) 657, 851, 983, 1511, 1554, 1607, 1868
Hpy99I CGWCG 2 cut(s) 11, 76
HpyAV CCTTC 4 cut(s) 372, 423, 645, 1307
HpyCH4III ACNGT 6 cut(s) 661, 873, 1020, 1322, 1502, 1701
HpyCH4IV ACGT 2 cut(s) 116, 156
HpySE526I ACGT 2 cut(s) 116, 156
Hsp92I GRCGYC 2 cut(s) 74, 1901
Hsp92II CATG 2 cut(s) 562, 1334
HspAI GCGC 9 cut(s) 52, 196, 198, 200, 271, 953, 955, 1830, 1901
KasI GGCGCC 1 cut(s) 1900
Ksp22I TGATCA 1 cut(s) 1372
KspAI GTTAAC 1 cut(s) 657
Kzo9I GATC 5 cut(s) 207, 369, 576, 1372, 1451
LguI GCTCTTC 1 cut(s) 57
LweI GCATC 5 cut(s) 511, 802, 1928, 1954, 1990
MabI ACCWGGT 2 cut(s) 802, 1000
MaeI CTAG 5 cut(s) 276, 543, 759, 846, 1518
MaeII ACGT 2 cut(s) 116, 156
MaeIII GTNAC 7 cut(s) 505, 685, 806, 1250, 1415, 1535, 1889
MalI GATC 5 cut(s) 209, 371, 578, 1374, 1453
MboI GATC 5 cut(s) 207, 369, 576, 1372, 1451
MboII GAAGA 1 cut(s) 74
MfeI CAATTG 1 cut(s) 1117
MflI RGATCY 1 cut(s) 1451
MhlI GDGCHC 7 cut(s) 401, 538, 558, 772, 1648, 1813, 1870
MlsI TGGCCA 2 cut(s) 188, 1185
MluCI AATT 5 cut(s) 693, 720, 855, 1117, 1255
MluNI TGGCCA 2 cut(s) 188, 1185
Mly113I GGCGCC 1 cut(s) 1901
MlyI GAGTC 1 cut(s) 475
MmeI TCCRAC 1 cut(s) 563
Mox20I TGGCCA 2 cut(s) 188, 1185
Mph1103I ATGCAT 1 cut(s) 1921
MscI TGGCCA 2 cut(s) 188, 1185
MseI TTAA 2 cut(s) 656, 744
MslI CAYNNNNRTG 1 cut(s) 182
Msp20I TGGCCA 2 cut(s) 188, 1185
MspA1I CMGCKG 4 cut(s) 1133, 1229, 1238, 1397
MspI CCGG 2 cut(s) 1821, 1886
MunI CAATTG 1 cut(s) 1117
MvaI CCWGG 9 cut(s) 395, 804, 1002, 1077, 1160, 1218, 1563, 1716, 1749
MvnI CGCG 5 cut(s) 85, 198, 200, 955, 1989
NarI GGCGCC 1 cut(s) 1901
NciI CCSGG 1 cut(s) 1887
NdeI CATATG 1 cut(s) 1996
NdeII GATC 5 cut(s) 207, 369, 576, 1372, 1451
NlaIII CATG 2 cut(s) 562, 1334
NlaIV GGNNCC 6 cut(s) 31, 493, 1124, 1225, 1720, 1902
NmuCI GTSAC 1 cut(s) 806
NsiI ATGCAT 1 cut(s) 1921
PaqCI CACCTGC 1 cut(s) 2017
PasI CCCWGGG 1 cut(s) 1159
PauI GCGCGC 3 cut(s) 196, 198, 953
PciSI GCTCTTC 1 cut(s) 57
PfeI GAWTC 9 cut(s) 35, 131, 296, 499, 623, 784, 898, 1463, 1796
PflFI GACNNNGTC 1 cut(s) 484
PflMI CCANNNNNTGG 6 cut(s) 969, 1100, 1568, 1778, 1862, 1877
PfoI TCCNGGA 1 cut(s) 1714
PleI GAGTC 1 cut(s) 475
PluTI GGCGCC 1 cut(s) 1904
PpsI GAGTC 1 cut(s) 475
PpuMI RGGWCCY 1 cut(s) 632
Psp124BI GAGCTC 2 cut(s) 558, 772
Psp1406I AACGTT 1 cut(s) 156
Psp5II RGGWCCY 1 cut(s) 632
Psp6I CCWGG 9 cut(s) 393, 802, 1000, 1075, 1158, 1216, 1561, 1714, 1747
PspEI GGTNACC 1 cut(s) 1535
PspFI CCCAGC 4 cut(s) 969, 1062, 1706, 1841
PspGI CCWGG 9 cut(s) 393, 802, 1000, 1075, 1158, 1216, 1561, 1714, 1747
PspN4I GGNNCC 6 cut(s) 31, 493, 1124, 1225, 1720, 1902
PspPI GGNCC 8 cut(s) 29, 526, 632, 983, 1037, 1123, 1223, 1850
PspPPI RGGWCCY 1 cut(s) 632
PstI CTGCAG 2 cut(s) 1396, 1534
PstNI CAGNNNCTG 3 cut(s) 1136, 1739, 1799
PsuI RGATCY 1 cut(s) 1451
PsyI GACNNNGTC 1 cut(s) 484
PteI GCGCGC 3 cut(s) 196, 198, 953
PvuII CAGCTG 2 cut(s) 1133, 1397
RsaI GTAC 3 cut(s) 565, 663, 1575
RsaNI GTAC 3 cut(s) 564, 662, 1574
RseI CAYNNNNRTG 1 cut(s) 182
SacI GAGCTC 2 cut(s) 558, 772
SapI GCTCTTC 1 cut(s) 57
SaqAI TTAA 2 cut(s) 656, 744
Sau3AI GATC 5 cut(s) 207, 369, 576, 1372, 1451
Sau96I GGNCC 8 cut(s) 29, 526, 632, 983, 1037, 1123, 1223, 1850
SbfI CCTGCAGG 1 cut(s) 1534
SchI GAGTC 1 cut(s) 475
SdaI CCTGCAGG 1 cut(s) 1534
SduI GDGCHC 7 cut(s) 401, 538, 558, 772, 1648, 1813, 1870
SexAI ACCWGGT 2 cut(s) 802, 1000
SfaNI GCATC 5 cut(s) 511, 802, 1928, 1954, 1990
SfcI CTRYAG 4 cut(s) 148, 830, 1392, 1530
SfoI GGCGCC 1 cut(s) 1902
SinI GGWCC 6 cut(s) 29, 526, 632, 983, 1123, 1223
SmiMI CAYNNNNRTG 1 cut(s) 182
SmlI CTYRAG 4 cut(s) 260, 400, 1308, 1425
SmoI CTYRAG 4 cut(s) 260, 400, 1308, 1425
SpeI ACTAGT 1 cut(s) 845
Sse8387I CCTGCAGG 1 cut(s) 1534
Sse9I AATT 5 cut(s) 693, 720, 855, 1117, 1255
SspDI GGCGCC 1 cut(s) 1900
SspMI CTAG 5 cut(s) 276, 543, 759, 846, 1518
SstI GAGCTC 2 cut(s) 558, 772
StyI CCWWGG 2 cut(s) 275, 1546
TaaI ACNGT 6 cut(s) 661, 873, 1020, 1322, 1502, 1701
TaiI ACGT 2 cut(s) 119, 159
TaqI TCGA 2 cut(s) 217, 368
TasI AATT 5 cut(s) 693, 720, 855, 1117, 1255
TatI WGTACW 1 cut(s) 661
TauI GCSGC 2 cut(s) 79, 1270
TfiI GAWTC 9 cut(s) 35, 131, 296, 499, 623, 784, 898, 1463, 1796
Tru1I TTAA 2 cut(s) 656, 744
Tru9I TTAA 2 cut(s) 656, 744
TscAI CASTG 5 cut(s) 100, 241, 538, 970, 1507
TseFI GTSAC 1 cut(s) 806
Tsp45I GTSAC 1 cut(s) 806
TspDTI ATGAA 3 cut(s) 354, 618, 897
TspGWI ACGGA 1 cut(s) 132
TspRI CASTG 5 cut(s) 100, 241, 538, 970, 1507
Tth111I GACNNNGTC 1 cut(s) 484
Van91I CCANNNNNTGG 6 cut(s) 969, 1100, 1568, 1778, 1862, 1877
VneI GTGCAC 1 cut(s) 1866
VpaK11BI GGWCC 6 cut(s) 29, 526, 632, 983, 1123, 1223
XagI CCTNNNNNAGG 3 cut(s) 1074, 1275, 1311
XapI RAATTY 1 cut(s) 693
XmaJI CCTAGG 1 cut(s) 275
XmiI GTMKAC 1 cut(s) 1553
XspI CTAG 5 cut(s) 276, 543, 759, 846, 1518
Zsp2I ATGCAT 1 cut(s) 1921
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.