Rmu_sc0020140.1_g000001

Far upstream element-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0020140.1
OG0009579
Physical Location & Seq
Reverse (-)
1289 .. 15767
14479 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0020140.1_g000001.1.cds

Sequence Viewer

Length: 2955 bp
atggacgccgccgtttcatgctccggtgtctttccccaaatgaacctctccggctccgacctctcccgctcaggtcttaaatttccgatgggtaggtcttcgtgctcttacgcgaggtcaattggggcggtttcttgcaatgaaggattgcgaatcgttccgaaaaagcttgaattcttgtgctctgctgcgtcgagagatgaagagaggaatgaaatggtgtttggggcatcgcattgcgggaagaaaagtcctgttggggaggcattgtgtgttgctgcgggtgtatgcacttatggtgggactgctgtggagtctcatcactcccacattgcggaagagaatgttggagtgctgctcctgaatcttggaggacccgagacgcttgatgatgttcagccattcctgtttaatctattcgctgacccggatatcatacgtctacctagggcgtttcggtttcttcagaagccactggcaaaattgatttctgtgcttcgagctcctaagagcaaagaagggtatgcgtctattggaggtggttcgcccttgcgtaagataacagatgagcaggcaaatgcactgaaaatggctttggaatcaaaggacatgccagtgaatgtctatgtgggaatgcggtactggtacccattcactgaggaagcagttcatcaaattaagagggacagaataaccaggcttgttgtcctgcctctatatcctcaattctctatctctacaactggatcaagcgttcgtgtgctccagaagattttcaggaccgatccatatctatcaaggttgcctgtttcagttataaattcatggtatcaacgtgaaggttatattaagtcaatggctgacttgatctcaaaagagctagagagtttttctgagcctgcacaggtcatgatattcttcagtgcccacggggtaccactcagttatgtgaaggactctggagatccatacaaagatcaaatggaggagtgtatctttctaataatgaaagagttgaaagctagaggaatcaataatgaacatactcttgcctaccagagccgagttggtcctgtacaatggttgaagccatacactgatgaagttcttgttgagcttggccagaaaggagtaaaaagtcttctagctgttccagtcaggtatttcactctgtcatataaaaagtctgctatgtccaagtctgttatagagctatgcaatgccaagccttactcagctccatcgtcgatcccagtttcgtatgggttccaaggagggagcaaaaagattgatgttccaaatggcagggtcggtgttattattggtaaactgggtgagactattaagtatcttcaggctcagtctggaggagctaagattcaagttacccgagatgcagatgccgaccttaattgcccaactagggaggtggagatcatgggaactccagaacaaattgcaaaagctgagcatttgatacatgaagttcttgctgaggctgaatcaggcggtcctgccatagtttctcgaaggttaactggacaagctggagctgaaacatttgtaatgaaaattcctaacaacaaggttggtcttgtaattggtaaacgaggggaaactattaaaaatatgcaagctagtactgctgctcgtatacaggtgattcctttgcatcttccccccggtgacacctcaaccgaaaggacagtacagattgatggaactagtgaacaaattgaagctgccaaacagttggtgaatgaagttattagtgagaaccgtgttagaaatccagcaatggctggaggatattcacagcagggttatcaagcacgtcctcccactggctgggctcctagtggtcctccaatgcaacaaccaggttatggatatggacagtccggagcatattctggcacaacacctcagtataatgcatctcagccttcttattccggttatcctcctcaaccggcatctggtggatatcccaccaattgggatcagtcagctgttgcaccaactcagcagacctcccaggcaggtggttatgattactattcccaacaaccctcataccaacagcaaaaccctggtggtccttctgcaccagcggataatgctagttacaattatggccagccgcctatttcaggctataatcagcaaggacaaggttatcctcaagatggctatggtggatatcaggcaccacctcaatctgggtatggccagccacctgcatacgatcaacatggttatcctgcagccaactatggtaatgtgagcaacccagctccagatacccatacttcctcttatggatctcagggggaatcagcccaagcacctcctgtgcagcctgctccagggggccagcaagcatacagtgccactcaacagcctagcccgaacccctcaagttatccgccccaagtgtctactcagccaggttatggaatgcccccaacttctcaaactggttatgggactcaaccacctgctcaatctgcatatggacctggatatggagcacctccagcgcaaaagcctcctgctcagtcacccaccactcctggaggatatggtcaaccaccagctgtgcatccaggctatccccattctcagcctccaccttctggatatgctcagcctgattctggtgcacgtgctccaccatccagttatggttctacagcggctcaggcaggctatggtcccccatcttatggtgcaccgccatctggtcagccaggttatgggcaggtgccaccctacaatacatcttatggtgctgcaggatacacacagcctcctcctgcgtattctgctgaaggagcgaatggaaacactcgaggtgcatatgatggtgctggtgctggtactggtactggtgctcctgcttcacagactgctcagcaaagtggagttgccaaaacctccccacagagttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001505 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006417 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010033 GO:0010468 GO:0010494 GO:0010556 GO:0010558 GO:0010586 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010984 GO:0010985 GO:0010988 GO:0010989 GO:0016070 GO:0016071 GO:0017091 GO:0017148 GO:0019219 GO:0019222 GO:0019439 GO:0030425 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032991 GO:0034097 GO:0034248 GO:0034249 GO:0034641 GO:0034655 GO:0034660 GO:0035770 GO:0035925 GO:0036464 GO:0036477 GO:0042221 GO:0042995 GO:0043005 GO:0043025 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043487 GO:0043488 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044297 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044463 GO:0044464 GO:0045019 GO:0045428 GO:0045935 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050779 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0061013 GO:0061014 GO:0061157 GO:0061158 GO:0065007 GO:0065008 GO:0070013 GO:0070887 GO:0071310 GO:0071345 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097447 GO:0097458 GO:0120025 GO:0120038 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1903311 GO:1903313 GO:1903426 GO:1903427 GO:1904406 GO:1990904 GO:2000112 GO:2000113 GO:2000377 GO:2000378 GO:2000628
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KH_1

Protein Analysis

984

Amino Acids

104.3

Weight (kDa)

7.84

Isoelectric Point (pI)

48.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 818
AarI CACCTGC 4 cut(s) 2033, 2248, 2509, 2755
Acc36I ACCTGC 4 cut(s) 2033, 2248, 2509, 2755
Acc65I GGTACC 2 cut(s) 645, 934
AccB1I GGYRCC 4 cut(s) 645, 934, 2209, 2767
AccB7I CCANNNNNTGG 7 cut(s) 1848, 1886, 1998, 2456, 2639, 2729, 2759
AccBSI CCGCTC 1 cut(s) 69
AccI GTMKAC 3 cut(s) 442, 1654, 2441
AccII CGCG 1 cut(s) 113
AccIII TCCGGA 1 cut(s) 1901
AclWI GGATC 6 cut(s) 754, 779, 959, 1243, 2010, 2332
AcoI YGGCCR 3 cut(s) 1120, 2137, 2230
AcsI RAATTY 4 cut(s) 80, 173, 820, 1572
AcuI CTGAAG 4 cut(s) 449, 904, 1337, 2853
AcvI CACGTG 1 cut(s) 2669
AcyI GRCGYC 1 cut(s) 6
AfaI GTAC 8 cut(s) 641, 647, 936, 1077, 1642, 1710, 2884, 2890
AgsI TTSAA 5 cut(s) 173, 1018, 1087, 1382, 1739
AhlI ACTAGT 1 cut(s) 1724
AjiI CACGTC 1 cut(s) 1835
AjuI GAANNNNNNNTTGG 6 cut(s) 207, 239, 330, 362, 578, 610
AloI GAACNNNNNNTCC 2 cut(s) 738, 770
Alw21I GWGCWC 9 cut(s) 107, 185, 505, 765, 2536, 2668, 2674, 2737, 2899
Alw26I GTCTC 3 cut(s) 321, 374, 1331
Alw44I GTGCAC 2 cut(s) 2664, 2733
AlwI GGATC 6 cut(s) 754, 779, 959, 1243, 2010, 2332
Ama87I CYCGRG 3 cut(s) 377, 1389, 2853
Aor13HI TCCGGA 1 cut(s) 1901
AoxI GGCC 4 cut(s) 1120, 2137, 2230, 2374
ApaLI GTGCAC 2 cut(s) 2664, 2733
ApeKI GCWGC 8 cut(s) 188, 278, 355, 1646, 1742, 2267, 2359, 2795
ApoI RAATTY 4 cut(s) 80, 173, 820, 1572
Asp700I GAANNNNTTC 2 cut(s) 666, 773
Asp718I GGTACC 2 cut(s) 645, 934
AspA2I CCTAGG 1 cut(s) 446
AspLEI GCGC 1 cut(s) 2545
AspS9I GGNCC 9 cut(s) 374, 780, 1070, 1511, 1862, 2099, 2374, 2519, 2717
AsuC2I CCSGG 2 cut(s) 428, 1683
AsuHPI GGTGA 5 cut(s) 1346, 1672, 1697, 1768, 2556
AvaI CYCGRG 3 cut(s) 377, 1389, 2853
AvaII GGWCC 8 cut(s) 374, 780, 1070, 1511, 1862, 2099, 2519, 2717
AvrII CCTAGG 1 cut(s) 446
BaeGI GKGCMC 3 cut(s) 928, 2668, 2737
BalI TGGCCA 3 cut(s) 1122, 2139, 2232
BanI GGYRCC 4 cut(s) 645, 934, 2209, 2767
BanII GRGCYC 2 cut(s) 505, 1855
BarI GAAGNNNNNNTAC 2 cut(s) 1125, 1157
BbrPI CACGTG 1 cut(s) 2669
BbsI GAAGAC 2 cut(s) 90, 1133
Bbv12I GWGCWC 9 cut(s) 107, 185, 505, 765, 2536, 2668, 2674, 2737, 2899
BbvCI CCTCAGC 1 cut(s) 1494
BbvI GCAGC 8 cut(s) 175, 265, 342, 1633, 1729, 2279, 2371, 2782
BccI CCATC 8 cut(s) 82, 1249, 1712, 2183, 2686, 2731, 2749, 2861
BciVI GTATCC 1 cut(s) 2795
BcnI CCSGG 2 cut(s) 428, 1683
BcoDI GTCTC 3 cut(s) 321, 374, 1331
BcuI ACTAGT 1 cut(s) 1724
BfmI CTRYAG 3 cut(s) 2265, 2694, 2796
BfuAI ACCTGC 4 cut(s) 2033, 2248, 2509, 2755
BfuI GTATCC 1 cut(s) 2795
BlnI CCTAGG 1 cut(s) 446
BlpI GCTNAGC 3 cut(s) 1467, 2649, 2916
BmcAI AGTACT 1 cut(s) 1642
Bme18I GGWCC 8 cut(s) 374, 780, 1070, 1511, 1862, 2099, 2519, 2717
BmeT110I CYCGRG 3 cut(s) 377, 1389, 2853
BmgBI CACGTC 1 cut(s) 1835
BmgT120I GGNCC 9 cut(s) 374, 780, 1070, 1511, 1862, 2099, 2374, 2519, 2717
BmrI ACTGGG 2 cut(s) 1247, 1340
BmsI GCATC 7 cut(s) 239, 1384, 1390, 1681, 1946, 1985, 2614
BmuI ACTGGG 2 cut(s) 1247, 1340
BpiI GAAGAC 2 cut(s) 90, 1133
BplI GAGNNNNNCTC 2 cut(s) 342, 374
Bpu10I CCTNAGC 3 cut(s) 70, 1494, 2703
Bpu1102I GCTNAGC 3 cut(s) 1467, 2649, 2916
BpuEI CTTGAG 2 cut(s) 2169, 2404
BpuMI CCSGG 2 cut(s) 428, 1683
BsaAI YACGTR 1 cut(s) 2669
BsaBI GATNNNNATC 1 cut(s) 789
BsaHI GRCGYC 1 cut(s) 6
BsaJI CCNNGG 7 cut(s) 446, 928, 1270, 1681, 2037, 2092, 2369
BsaWI WCCGGW 3 cut(s) 23, 1901, 1955
BsaXI ACNNNNNCTCC 6 cut(s) 254, 284, 2797, 2827, 2881, 2911
Bse118I RCCGGY 1 cut(s) 1972
Bse3DI GCAATG 5 cut(s) 145, 235, 330, 1225, 1803
Bse8I GATNNNNATC 1 cut(s) 789
BseAI TCCGGA 1 cut(s) 1901
BseDI CCNNGG 7 cut(s) 446, 928, 1270, 1681, 2037, 2092, 2369
BseGI GGATG 2 cut(s) 2605, 2678
BseJI GATNNNNATC 1 cut(s) 789
BseMI GCAATG 5 cut(s) 145, 235, 330, 1225, 1803
BseRI GAGGAG 4 cut(s) 1001, 1383, 1956, 2805
BseSI GKGCMC 3 cut(s) 928, 2668, 2737
BseXI GCAGC 8 cut(s) 175, 265, 342, 1633, 1729, 2279, 2371, 2782
BseYI CCCAGC 2 cut(s) 1848, 2293
BsgI GTGCAG 3 cut(s) 885, 2091, 2378
Bsh1236I CGCG 1 cut(s) 113
BshFI GGCC 4 cut(s) 1122, 2139, 2232, 2376
BshNI GGYRCC 4 cut(s) 645, 934, 2209, 2767
BsiHKAI GWGCWC 9 cut(s) 107, 185, 505, 765, 2536, 2668, 2674, 2737, 2899
BsiHKCI CYCGRG 3 cut(s) 377, 1389, 2853
BsiSI CCGG 7 cut(s) 24, 51, 428, 1683, 1902, 1956, 1973
BslFI GGGAC 4 cut(s) 316, 698, 2503, 2703
BsmAI GTCTC 3 cut(s) 321, 374, 1331
BsmBI CGTCTC 1 cut(s) 374
BsmFI GGGAC 4 cut(s) 316, 698, 2503, 2703
BsmI GAATGC 2 cut(s) 639, 2466
BsnI GGCC 4 cut(s) 1122, 2139, 2232, 2376
BsoBI CYCGRG 3 cut(s) 377, 1389, 2853
Bsp13I TCCGGA 1 cut(s) 1901
Bsp1407I TGTACA 1 cut(s) 1075
Bsp1720I GCTNAGC 3 cut(s) 1467, 2649, 2916
BspANI GGCC 4 cut(s) 1122, 2139, 2232, 2376
BspEI TCCGGA 1 cut(s) 1901
BspFNI CGCG 1 cut(s) 113
BspHI TCATGA 1 cut(s) 909
BspMAI CTGCAG 2 cut(s) 2269, 2800
BspMI ACCTGC 4 cut(s) 2033, 2248, 2509, 2755
BspPI GGATC 6 cut(s) 754, 779, 959, 1243, 2010, 2332
BspT107I GGYRCC 4 cut(s) 645, 934, 2209, 2767
BsrBI CCGCTC 1 cut(s) 69
BsrDI GCAATG 5 cut(s) 145, 235, 330, 1225, 1803
BsrFI RCCGGY 1 cut(s) 1972
BsrGI TGTACA 1 cut(s) 1075
BssAI RCCGGY 1 cut(s) 1972
BssECI CCNNGG 7 cut(s) 446, 928, 1270, 1681, 2037, 2092, 2369
BssNAI GTATAC 1 cut(s) 1655
BssNI GRCGYC 1 cut(s) 6
BssT1I CCWWGG 2 cut(s) 446, 1270
Bst1107I GTATAC 1 cut(s) 1655
Bst4CI ACNGT 5 cut(s) 1708, 1752, 1781, 1899, 2390
Bst6I CTCTTC 2 cut(s) 198, 333
BstACI GRCGYC 1 cut(s) 6
BstAPI GCANNNNNTGC 1 cut(s) 2390
BstAUI TGTACA 1 cut(s) 1075
BstBAI YACGTR 1 cut(s) 2669
BstC8I GCNNGC 9 cut(s) 573, 900, 1635, 2141, 2234, 2364, 2378, 2382, 2710
BstDSI CCRYGG 1 cut(s) 928
BstENI CCTNNNNNAGG 2 cut(s) 2151, 2367
BstF5I GGATG 2 cut(s) 2605, 2678
BstFNI CGCG 1 cut(s) 113
BstHHI GCGC 1 cut(s) 2545
BstMAI GTCTC 3 cut(s) 321, 374, 1331
BstMWI GCNNNNNNNGC 8 cut(s) 1643, 2120, 2390, 2510, 2540, 2705, 2828, 2837
BstNSI RCATGY 1 cut(s) 613
BstSFI CTRYAG 3 cut(s) 2265, 2694, 2796
BstSLI GKGCMC 3 cut(s) 928, 2668, 2737
BstUI CGCG 1 cut(s) 113
BstV1I GCAGC 8 cut(s) 175, 265, 342, 1633, 1729, 2279, 2371, 2782
BstV2I GAAGAC 2 cut(s) 90, 1133
BstX2I RGATCY 2 cut(s) 964, 2324
BstXI CCANNNNNNTGG 2 cut(s) 1753, 2045
BstYI RGATCY 2 cut(s) 964, 2324
BstZ17I GTATAC 1 cut(s) 1655
BsuI GTATCC 1 cut(s) 2795
BsuRI GGCC 4 cut(s) 1122, 2139, 2232, 2376
BtgI CCRYGG 1 cut(s) 928
BtgZI GCGATG 1 cut(s) 216
BtrI CACGTC 1 cut(s) 1835
BtsCI GGATG 2 cut(s) 2605, 2678
BtsIMutI CAGTG 8 cut(s) 473, 581, 621, 654, 928, 1095, 1842, 2395
BveI ACCTGC 4 cut(s) 2033, 2248, 2509, 2755
Cac8I GCNNGC 9 cut(s) 573, 900, 1635, 2141, 2234, 2364, 2378, 2382, 2710
CciI TCATGA 1 cut(s) 909
CfoI GCGC 1 cut(s) 2545
Cfr10I RCCGGY 1 cut(s) 1972
Cfr13I GGNCC 9 cut(s) 374, 780, 1070, 1511, 1862, 2099, 2374, 2519, 2717
CseI GACGC 4 cut(s) 14, 180, 391, 516
CsiI ACCWGGT 1 cut(s) 1879
Csp6I GTAC 8 cut(s) 640, 646, 935, 1076, 1641, 1709, 2883, 2889
CviAII CATG 7 cut(s) 18, 610, 825, 910, 1438, 1481, 2255
CviQI GTAC 8 cut(s) 640, 646, 935, 1076, 1641, 1709, 2883, 2889
EaeI YGGCCR 3 cut(s) 1120, 2137, 2230
Eam1104I CTCTTC 2 cut(s) 198, 333
EarI CTCTTC 2 cut(s) 198, 333
EciI GGCGGA 1 cut(s) 2418
Ecl136II GAGCTC 1 cut(s) 503
Eco130I CCWWGG 2 cut(s) 446, 1270
Eco24I GRGCYC 2 cut(s) 505, 1855
Eco32I GATATC 3 cut(s) 433, 1988, 2204
Eco47I GGWCC 8 cut(s) 374, 780, 1070, 1511, 1862, 2099, 2519, 2717
Eco53kI GAGCTC 1 cut(s) 503
Eco57I CTGAAG 4 cut(s) 449, 904, 1337, 2853
Eco72I CACGTG 1 cut(s) 2669
Eco88I CYCGRG 3 cut(s) 377, 1389, 2853
EcoICRI GAGCTC 1 cut(s) 503
EcoNI CCTNNNNNAGG 2 cut(s) 2151, 2367
EcoO109I RGGNCCY 1 cut(s) 374
EcoRI GAATTC 1 cut(s) 173
EcoRV GATATC 3 cut(s) 433, 1988, 2204
EcoT14I CCWWGG 2 cut(s) 446, 1270
EcoT22I ATGCAT 1 cut(s) 1939
EcoT38I GRGCYC 2 cut(s) 505, 1855
ErhI CCWWGG 2 cut(s) 446, 1270
Esp3I CGTCTC 1 cut(s) 374
FaeI CATG 7 cut(s) 21, 613, 828, 913, 1441, 1484, 2258
FaqI GGGAC 4 cut(s) 316, 698, 2503, 2703
FatI CATG 7 cut(s) 17, 609, 824, 909, 1437, 1480, 2254
FauI CCCGC 3 cut(s) 74, 233, 274
FauNDI CATATG 2 cut(s) 2515, 2863
FblI GTMKAC 3 cut(s) 442, 1654, 2441
FokI GGATG 2 cut(s) 2592, 2665
FriOI GRGCYC 2 cut(s) 505, 1855
GlaI GCGC 1 cut(s) 2544
GsaI CCCAGC 2 cut(s) 1852, 2297
HaeIII GGCC 4 cut(s) 1122, 2139, 2232, 2376
HapII CCGG 7 cut(s) 24, 51, 428, 1683, 1902, 1956, 1973
HgaI GACGC 4 cut(s) 14, 180, 391, 516
HhaI GCGC 1 cut(s) 2545
Hin1I GRCGYC 1 cut(s) 6
Hin1II CATG 7 cut(s) 21, 613, 828, 913, 1441, 1484, 2258
Hin6I GCGC 1 cut(s) 2543
HinP1I GCGC 1 cut(s) 2543
HincII GTYRAC 2 cut(s) 1536, 2591
HindII GTYRAC 2 cut(s) 1536, 2591
HindIII AAGCTT 1 cut(s) 167
HpaI GTTAAC 1 cut(s) 1536
HpaII CCGG 7 cut(s) 24, 51, 428, 1683, 1902, 1956, 1973
HphI GGTGA 5 cut(s) 1346, 1672, 1697, 1768, 2556
Hpy188I TCNGA 5 cut(s) 58, 87, 162, 468, 895
Hpy99I CGWCG 2 cut(s) 196, 1249
HpyAV CCTTC 9 cut(s) 137, 512, 833, 946, 1524, 1956, 2112, 2646, 2828
HpyCH4III ACNGT 5 cut(s) 1708, 1752, 1781, 1899, 2390
HpyCH4IV ACGT 4 cut(s) 439, 835, 1834, 2668
HpyF10VI GCNNNNNNNGC 8 cut(s) 1643, 2120, 2390, 2510, 2540, 2705, 2828, 2837
HpySE526I ACGT 4 cut(s) 439, 835, 1834, 2668
Hsp92I GRCGYC 1 cut(s) 6
Hsp92II CATG 7 cut(s) 21, 613, 828, 913, 1441, 1484, 2258
HspAI GCGC 1 cut(s) 2543
Kpn2I TCCGGA 1 cut(s) 1901
KpnI GGTACC 2 cut(s) 649, 938
KspAI GTTAAC 1 cut(s) 1536
Lsp1109I GCAGC 8 cut(s) 175, 265, 342, 1633, 1729, 2279, 2371, 2782
LweI GCATC 7 cut(s) 239, 1384, 1390, 1681, 1946, 1985, 2614
MabI ACCWGGT 1 cut(s) 1879
MaeII ACGT 4 cut(s) 439, 835, 1834, 2668
MaeIII GTNAC 4 cut(s) 1384, 1685, 2126, 2562
MbiI CCGCTC 1 cut(s) 69
MfeI CAATTG 2 cut(s) 120, 1996
MflI RGATCY 2 cut(s) 964, 2324
MlsI TGGCCA 3 cut(s) 1122, 2139, 2232
MluNI TGGCCA 3 cut(s) 1122, 2139, 2232
MlyI GAGTC 3 cut(s) 323, 950, 2485
MmeI TCCRAC 2 cut(s) 81, 328
Mox20I TGGCCA 3 cut(s) 1122, 2139, 2232
Mph1103I ATGCAT 1 cut(s) 1939
MroI TCCGGA 1 cut(s) 1901
MroXI GAANNNNTTC 2 cut(s) 666, 773
MscI TGGCCA 3 cut(s) 1122, 2139, 2232
MseI TTAA 8 cut(s) 78, 411, 678, 849, 1344, 1410, 1535, 1623
MslI CAYNNNNRTG 1 cut(s) 614
Msp20I TGGCCA 3 cut(s) 1122, 2139, 2232
MspA1I CMGCKG 4 cut(s) 2012, 2114, 2600, 2699
MspI CCGG 7 cut(s) 24, 51, 428, 1683, 1902, 1956, 1973
MunI CAATTG 2 cut(s) 120, 1996
Mva1269I GAATGC 2 cut(s) 639, 2466
MvnI CGCG 1 cut(s) 113
MwoI GCNNNNNNNGC 8 cut(s) 1643, 2120, 2390, 2510, 2540, 2705, 2828, 2837
NciI CCSGG 2 cut(s) 428, 1683
NdeI CATATG 2 cut(s) 2515, 2863
NlaIII CATG 7 cut(s) 21, 613, 828, 913, 1441, 1484, 2258
NmeAIII GCCGAG 1 cut(s) 1088
NmuCI GTSAC 2 cut(s) 1685, 2562
NsiI ATGCAT 1 cut(s) 1939
NspI RCATGY 1 cut(s) 613
PaeR7I CTCGAG 1 cut(s) 2853
PagI TCATGA 1 cut(s) 909
PaqCI CACCTGC 4 cut(s) 2033, 2248, 2509, 2755
PctI GAATGC 2 cut(s) 639, 2466
PdmI GAANNNNTTC 2 cut(s) 666, 773
PfeI GAWTC 9 cut(s) 153, 364, 599, 1029, 1378, 1502, 1663, 2336, 2657
PflMI CCANNNNNTGG 7 cut(s) 1848, 1886, 1998, 2456, 2639, 2729, 2759
PfoI TCCNGGA 1 cut(s) 2575
PleI GAGTC 3 cut(s) 322, 950, 2485
PmaCI CACGTG 1 cut(s) 2669
PmlI CACGTG 1 cut(s) 2669
PpsI GAGTC 3 cut(s) 322, 950, 2485
Ppu21I YACGTR 1 cut(s) 2669
PpuMI RGGWCCY 1 cut(s) 374
PsiI TTATAA 1 cut(s) 818
Psp124BI GAGCTC 1 cut(s) 505
Psp5II RGGWCCY 1 cut(s) 374
PspCI CACGTG 1 cut(s) 2669
PspFI CCCAGC 2 cut(s) 1848, 2293
PspPI GGNCC 9 cut(s) 374, 780, 1070, 1511, 1862, 2099, 2374, 2519, 2717
PspPPI RGGWCCY 1 cut(s) 374
PspXI VCTCGAGB 1 cut(s) 2853
PstI CTGCAG 2 cut(s) 2269, 2800
PsuI RGATCY 2 cut(s) 964, 2324
PvuII CAGCTG 2 cut(s) 2012, 2600
RsaI GTAC 8 cut(s) 641, 647, 936, 1077, 1642, 1710, 2884, 2890
RsaNI GTAC 8 cut(s) 640, 646, 935, 1076, 1641, 1709, 2883, 2889
RseI CAYNNNNRTG 1 cut(s) 614
SacI GAGCTC 1 cut(s) 505
SaqAI TTAA 8 cut(s) 78, 411, 678, 849, 1344, 1410, 1535, 1623
Sau96I GGNCC 9 cut(s) 374, 780, 1070, 1511, 1862, 2099, 2374, 2519, 2717
ScaI AGTACT 1 cut(s) 1642
SchI GAGTC 3 cut(s) 323, 950, 2485
SexAI ACCWGGT 1 cut(s) 1879
SfaNI GCATC 7 cut(s) 239, 1384, 1390, 1681, 1946, 1985, 2614
SfcI CTRYAG 3 cut(s) 2265, 2694, 2796
Sfr274I CTCGAG 1 cut(s) 2853
SinI GGWCC 8 cut(s) 374, 780, 1070, 1511, 1862, 2099, 2519, 2717
SlaI CTCGAG 1 cut(s) 2853
SmiMI CAYNNNNRTG 1 cut(s) 614
SmlI CTYRAG 3 cut(s) 2184, 2419, 2853
SmoI CTYRAG 3 cut(s) 2184, 2419, 2853
SpeI ACTAGT 1 cut(s) 1724
SstI GAGCTC 1 cut(s) 505
StyI CCWWGG 2 cut(s) 446, 1270
TaaI ACNGT 5 cut(s) 1708, 1752, 1781, 1899, 2390
TaiI ACGT 4 cut(s) 442, 838, 1837, 2671
TaqI TCGA 5 cut(s) 194, 499, 1247, 1528, 2854
TaqII GACCGA 1 cut(s) 797
TatI WGTACW 3 cut(s) 1075, 1640, 1708
TauI GCSGC 3 cut(s) 11, 2146, 2702
TfiI GAWTC 9 cut(s) 153, 364, 599, 1029, 1378, 1502, 1663, 2336, 2657
Tru1I TTAA 8 cut(s) 78, 411, 678, 849, 1344, 1410, 1535, 1623
Tru9I TTAA 8 cut(s) 78, 411, 678, 849, 1344, 1410, 1535, 1623
TscAI CASTG 8 cut(s) 480, 588, 621, 661, 928, 1102, 1849, 2395
TseFI GTSAC 2 cut(s) 1685, 2562
TseI GCWGC 8 cut(s) 188, 278, 355, 1646, 1742, 2267, 2359, 2795
Tsp45I GTSAC 2 cut(s) 1685, 2562
TspRI CASTG 8 cut(s) 480, 588, 621, 661, 928, 1102, 1849, 2395
Van91I CCANNNNNTGG 7 cut(s) 1848, 1886, 1998, 2456, 2639, 2729, 2759
VneI GTGCAC 2 cut(s) 2664, 2733
VpaK11BI GGWCC 8 cut(s) 374, 780, 1070, 1511, 1862, 2099, 2519, 2717
XagI CCTNNNNNAGG 2 cut(s) 2151, 2367
XapI RAATTY 4 cut(s) 80, 173, 820, 1572
XceI RCATGY 1 cut(s) 613
XcmI CCANNNNNNNNNTGG 1 cut(s) 1064
XhoI CTCGAG 1 cut(s) 2853
XmaJI CCTAGG 1 cut(s) 446
XmiI GTMKAC 3 cut(s) 442, 1654, 2441
XmnI GAANNNNTTC 2 cut(s) 666, 773
ZrmI AGTACT 1 cut(s) 1642
Zsp2I ATGCAT 1 cut(s) 1939
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.