DNA topoisomerase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G31210 AT4G31210 AT4G31210 |
| fragaria_vesca | FvH4_2g36580 FvH4_2g36580 FvH4_2g36580 FvH4_2g36580 FvH4_2g36580 |
| malus_domestica | MD08G1125900.v1.1 MD15G1105700.v1.1 |
| prunus_persica | Prupe.1G457500_v2.0.a1 Prupe.1G457500_v2.0.a1 Prupe.1G457500_v2.0.a1 Prupe.1G457500_v2.0.a1 |
| pyrus_communis | pycom08g10500 pycom15g09590 |
| rosa_chinensis | RchiOBHm_Chr6g0305241 |
| rosa_laevigata | RLG00000010838 RLG00000010906 |
| rosa_roxburghii | Rroxscaffold_7G00163020 |
| rosa_rugosa | Rorug06G0338800 Rorug06G0338900 |
| rosa_samantha | Rh6AG450500 Rh6BG450900 Rh6CG464400 Rh6DG451100 |
| rosa_wichuraiana | Rw6G039260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 2406 |
| Acc36I | ACCTGC | 1 cut(s) | 634 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2878 |
| AccI | GTMKAC | 2 cut(s) | 915, 3478 |
| AccIII | TCCGGA | 1 cut(s) | 469 |
| AciI | CCGC | 8 cut(s) | 103, 297, 873, 1222, 1873, 2009, 2012, 2355 |
| AclWI | GGATC | 5 cut(s) | 1222, 1328, 1782, 2346, 3184 |
| AcoI | YGGCCR | 1 cut(s) | 114 |
| AcsI | RAATTY | 5 cut(s) | 691, 1495, 1655, 2900, 3419 |
| AcuI | CTGAAG | 3 cut(s) | 606, 1895, 2501 |
| AcyI | GRCGYC | 1 cut(s) | 2403 |
| AdeI | CACNNNGTG | 2 cut(s) | 1304, 1523 |
| AfaI | GTAC | 6 cut(s) | 826, 1082, 2249, 2499, 2854, 3186 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 112, 213, 1091, 1181, 1390, 1801, 2878, 3319, 3323 |
| AflII | CTTAAG | 1 cut(s) | 1280 |
| AflIII | ACRYGT | 2 cut(s) | 1600, 2945 |
| AjiI | CACGTC | 3 cut(s) | 249, 1523, 1601 |
| AjnI | CCWGG | 2 cut(s) | 1268, 1708 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 548, 580, 2886, 2918 |
| Alw21I | GWGCWC | 3 cut(s) | 1468, 1528, 2589 |
| Alw26I | GTCTC | 4 cut(s) | 465, 724, 2756, 2901 |
| AlwI | GGATC | 5 cut(s) | 1222, 1328, 1782, 2346, 3184 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1217, 3263 |
| Ama87I | CYCGRG | 1 cut(s) | 2588 |
| Aor13HI | TCCGGA | 1 cut(s) | 469 |
| AoxI | GGCC | 7 cut(s) | 114, 269, 1223, 2163, 2180, 2388, 2806 |
| ApeKI | GCWGC | 8 cut(s) | 121, 1001, 1171, 1202, 1265, 1613, 1819, 1922 |
| ApoI | RAATTY | 5 cut(s) | 691, 1495, 1655, 2900, 3419 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 728, 760, 2900, 2932 |
| AseI | ATTAAT | 2 cut(s) | 1413, 1827 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 202, 524, 2602, 3150 |
| AspLEI | GCGC | 2 cut(s) | 896, 3381 |
| AspS9I | GGNCC | 7 cut(s) | 18, 269, 1224, 1501, 2164, 2181, 3167 |
| AsuC2I | CCSGG | 3 cut(s) | 150, 208, 946 |
| AsuHPI | GGTGA | 8 cut(s) | 974, 1002, 1166, 1548, 2158, 2519, 3206, 3207 |
| AvaI | CYCGRG | 1 cut(s) | 2588 |
| AvaII | GGWCC | 3 cut(s) | 18, 1501, 3167 |
| BalI | TGGCCA | 1 cut(s) | 116 |
| BanII | GRGCYC | 2 cut(s) | 503, 2589 |
| BbsI | GAAGAC | 6 cut(s) | 159, 911, 2605, 3081, 3167, 3204 |
| Bbv12I | GWGCWC | 3 cut(s) | 1468, 1528, 2589 |
| BbvI | GCAGC | 8 cut(s) | 108, 988, 1158, 1214, 1252, 1600, 1831, 1909 |
| BceAI | ACGGC | 4 cut(s) | 148, 335, 2375, 2766 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1276, 1310, 2340, 2374 |
| BciT130I | CCWGG | 2 cut(s) | 1270, 1710 |
| BciVI | GTATCC | 3 cut(s) | 3203, 3303, 3353 |
| BclI | TGATCA | 4 cut(s) | 243, 1489, 2019, 2932 |
| BcnI | CCSGG | 3 cut(s) | 150, 208, 946 |
| BcoDI | GTCTC | 4 cut(s) | 465, 724, 2756, 2901 |
| BfaI | CTAG | 7 cut(s) | 429, 1176, 1206, 1619, 2225, 2364, 3252 |
| BfmI | CTRYAG | 3 cut(s) | 122, 2295, 3231 |
| BfoI | RGCGCY | 1 cut(s) | 897 |
| BfrI | CTTAAG | 1 cut(s) | 1280 |
| BfuAI | ACCTGC | 1 cut(s) | 634 |
| BfuI | GTATCC | 3 cut(s) | 3203, 3303, 3353 |
| BglII | AGATCT | 1 cut(s) | 929 |
| BlpI | GCTNAGC | 1 cut(s) | 890 |
| BmcAI | AGTACT | 1 cut(s) | 826 |
| Bme1390I | CCNGG | 5 cut(s) | 150, 208, 946, 1270, 1710 |
| Bme18I | GGWCC | 3 cut(s) | 18, 1501, 3167 |
| BmeT110I | CYCGRG | 1 cut(s) | 2588 |
| BmgBI | CACGTC | 3 cut(s) | 249, 1523, 1601 |
| BmgT120I | GGNCC | 7 cut(s) | 18, 269, 1224, 1501, 2164, 2181, 3167 |
| BmiI | GGNNCC | 5 cut(s) | 20, 502, 2289, 3111, 3311 |
| BmrFI | CCNGG | 5 cut(s) | 150, 208, 946, 1270, 1710 |
| BmrI | ACTGGG | 2 cut(s) | 1101, 3129 |
| BmuI | ACTGGG | 2 cut(s) | 1101, 3129 |
| BpiI | GAAGAC | 6 cut(s) | 159, 911, 2605, 3081, 3167, 3204 |
| BpmI | CTGGAG | 4 cut(s) | 156, 894, 2433, 3449 |
| Bpu10I | CCTNAGC | 2 cut(s) | 212, 2157 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 890 |
| BpuEI | CTTGAG | 3 cut(s) | 447, 2504, 3299 |
| BpuMI | CCSGG | 3 cut(s) | 150, 208, 946 |
| Bsa29I | ATCGAT | 1 cut(s) | 1650 |
| BsaAI | YACGTR | 1 cut(s) | 1403 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1338, 2203 |
| BsaHI | GRCGYC | 1 cut(s) | 2403 |
| BsaI | GGTCTC | 1 cut(s) | 724 |
| BsaJI | CCNNGG | 5 cut(s) | 111, 944, 2082, 2377, 3483 |
| BsaWI | WCCGGW | 1 cut(s) | 469 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 265, 295, 2524, 2554 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 112, 213, 1091, 1181, 1390, 1801, 2878, 3319, 3323 |
| Bse1I | ACTGG | 9 cut(s) | 173, 911, 1096, 2495, 2828, 2856, 3135, 3169, 3332 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1338, 2203 |
| BseAI | TCCGGA | 1 cut(s) | 469 |
| BseBI | CCWGG | 2 cut(s) | 1270, 1710 |
| BseCI | ATCGAT | 1 cut(s) | 1650 |
| BseDI | CCNNGG | 5 cut(s) | 111, 944, 2082, 2377, 3483 |
| BseJI | GATNNNNATC | 2 cut(s) | 1338, 2203 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 112, 213, 1091, 1181, 1390, 1801, 2878, 3319, 3323 |
| BseMII | CTCAG | 9 cut(s) | 109, 358, 881, 1011, 2171, 2227, 2547, 2757, 2804 |
| BseNI | ACTGG | 9 cut(s) | 173, 911, 1096, 2495, 2828, 2856, 3135, 3169, 3332 |
| BseRI | GAGGAG | 2 cut(s) | 2532, 2597 |
| BseXI | GCAGC | 8 cut(s) | 108, 988, 1158, 1214, 1252, 1600, 1831, 1909 |
| BseYI | CCCAGC | 1 cut(s) | 266 |
| BsgI | GTGCAG | 4 cut(s) | 148, 1329, 1599, 3018 |
| BshFI | GGCC | 7 cut(s) | 116, 271, 1225, 2165, 2182, 2390, 2808 |
| BshVI | ATCGAT | 1 cut(s) | 1650 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1468, 1528, 2589 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2588 |
| BsiSI | CCGG | 5 cut(s) | 150, 208, 470, 946, 1596 |
| BslFI | GGGAC | 3 cut(s) | 132, 379, 1208 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 112, 213, 1091, 1181, 1390, 1801, 2878, 3319, 3323 |
| BsmAI | GTCTC | 4 cut(s) | 465, 724, 2756, 2901 |
| BsmFI | GGGAC | 3 cut(s) | 132, 379, 1208 |
| BsmI | GAATGC | 1 cut(s) | 2158 |
| BsnI | GGCC | 7 cut(s) | 116, 271, 1225, 2165, 2182, 2390, 2808 |
| Bso31I | GGTCTC | 1 cut(s) | 724 |
| BsoBI | CYCGRG | 1 cut(s) | 2588 |
| Bsp1286I | GDGCHC | 4 cut(s) | 503, 1468, 1528, 2589 |
| Bsp13I | TCCGGA | 1 cut(s) | 469 |
| Bsp1407I | TGTACA | 2 cut(s) | 2247, 3184 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 890 |
| Bsp19I | CCATGG | 1 cut(s) | 111 |
| BspACI | CCGC | 8 cut(s) | 103, 297, 873, 1222, 1873, 2009, 2012, 2355 |
| BspANI | GGCC | 7 cut(s) | 116, 271, 1225, 2165, 2182, 2390, 2808 |
| BspCNI | CTCAG | 9 cut(s) | 108, 357, 882, 1010, 2170, 2226, 2548, 2758, 2805 |
| BspDI | ATCGAT | 1 cut(s) | 1650 |
| BspEI | TCCGGA | 1 cut(s) | 469 |
| BspHI | TCATGA | 1 cut(s) | 1435 |
| BspLI | GGNNCC | 5 cut(s) | 20, 502, 2289, 3111, 3311 |
| BspMAI | CTGCAG | 1 cut(s) | 126 |
| BspMI | ACCTGC | 1 cut(s) | 634 |
| BspPI | GGATC | 5 cut(s) | 1222, 1328, 1782, 2346, 3184 |
| BspTI | CTTAAG | 1 cut(s) | 1280 |
| BspTNI | GGTCTC | 1 cut(s) | 724 |
| BsrGI | TGTACA | 2 cut(s) | 2247, 3184 |
| BsrI | ACTGG | 9 cut(s) | 173, 911, 1096, 2495, 2828, 2856, 3135, 3169, 3332 |
| BssECI | CCNNGG | 5 cut(s) | 111, 944, 2082, 2377, 3483 |
| BssNI | GRCGYC | 1 cut(s) | 2403 |
| BssT1I | CCWWGG | 4 cut(s) | 111, 2082, 2377, 3483 |
| Bst2UI | CCWGG | 2 cut(s) | 1270, 1710 |
| BstACI | GRCGYC | 1 cut(s) | 2403 |
| BstAFI | CTTAAG | 1 cut(s) | 1280 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 800, 1523 |
| BstAUI | TGTACA | 2 cut(s) | 2247, 3184 |
| BstBAI | YACGTR | 1 cut(s) | 1403 |
| BstDSI | CCRYGG | 1 cut(s) | 111 |
| BstH2I | RGCGCY | 1 cut(s) | 897 |
| BstHHI | GCGC | 2 cut(s) | 896, 3381 |
| BstMAI | GTCTC | 4 cut(s) | 465, 724, 2756, 2901 |
| BstNI | CCWGG | 2 cut(s) | 1270, 1710 |
| BstNSI | RCATGY | 2 cut(s) | 2361, 2949 |
| BstSCI | CCNGG | 5 cut(s) | 148, 206, 944, 1268, 1708 |
| BstSFI | CTRYAG | 3 cut(s) | 122, 2295, 3231 |
| BstSNI | TACGTA | 1 cut(s) | 1403 |
| BstV1I | GCAGC | 8 cut(s) | 108, 988, 1158, 1214, 1252, 1600, 1831, 1909 |
| BstV2I | GAAGAC | 6 cut(s) | 159, 911, 2605, 3081, 3167, 3204 |
| BstX2I | RGATCY | 3 cut(s) | 929, 1214, 1333 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1771 |
| BstYI | RGATCY | 3 cut(s) | 929, 1214, 1333 |
| Bsu15I | ATCGAT | 1 cut(s) | 1650 |
| BsuI | GTATCC | 3 cut(s) | 3203, 3303, 3353 |
| BsuRI | GGCC | 7 cut(s) | 116, 271, 1225, 2165, 2182, 2390, 2808 |
| BsuTUI | ATCGAT | 1 cut(s) | 1650 |
| BtgI | CCRYGG | 1 cut(s) | 111 |
| BtgZI | GCGATG | 1 cut(s) | 315 |
| BtrI | CACGTC | 3 cut(s) | 249, 1523, 1601 |
| BtsI | GCAGTG | 1 cut(s) | 131 |
| BtsIMutI | CAGTG | 9 cut(s) | 131, 352, 1948, 2088, 2184, 2477, 2661, 2842, 3339 |
| BveI | ACCTGC | 1 cut(s) | 634 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1217, 3263 |
| CciI | TCATGA | 1 cut(s) | 1435 |
| CfoI | GCGC | 2 cut(s) | 896, 3381 |
| Cfr13I | GGNCC | 7 cut(s) | 18, 269, 1224, 1501, 2164, 2181, 3167 |
| ClaI | ATCGAT | 1 cut(s) | 1650 |
| CseI | GACGC | 1 cut(s) | 1759 |
| CsiI | ACCWGGT | 1 cut(s) | 1708 |
| Csp6I | GTAC | 6 cut(s) | 825, 1081, 2248, 2498, 2853, 3185 |
| CviQI | GTAC | 6 cut(s) | 825, 1081, 2248, 2498, 2853, 3185 |
| DraI | TTTAAA | 1 cut(s) | 1843 |
| DraIII | CACNNNGTG | 2 cut(s) | 1304, 1523 |
| EaeI | YGGCCR | 1 cut(s) | 114 |
| EciI | GGCGGA | 1 cut(s) | 92 |
| Ecl136II | GAGCTC | 1 cut(s) | 2587 |
| Eco105I | TACGTA | 1 cut(s) | 1403 |
| Eco130I | CCWWGG | 4 cut(s) | 111, 2082, 2377, 3483 |
| Eco147I | AGGCCT | 1 cut(s) | 2808 |
| Eco24I | GRGCYC | 2 cut(s) | 503, 2589 |
| Eco31I | GGTCTC | 1 cut(s) | 724 |
| Eco32I | GATATC | 1 cut(s) | 2384 |
| Eco47I | GGWCC | 3 cut(s) | 18, 1501, 3167 |
| Eco53kI | GAGCTC | 1 cut(s) | 2587 |
| Eco57I | CTGAAG | 3 cut(s) | 606, 1895, 2501 |
| Eco88I | CYCGRG | 1 cut(s) | 2588 |
| EcoICRI | GAGCTC | 1 cut(s) | 2587 |
| EcoO109I | RGGNCCY | 1 cut(s) | 18 |
| EcoRII | CCWGG | 2 cut(s) | 1268, 1708 |
| EcoRV | GATATC | 1 cut(s) | 2384 |
| EcoT14I | CCWWGG | 4 cut(s) | 111, 2082, 2377, 3483 |
| EcoT22I | ATGCAT | 1 cut(s) | 3439 |
| EcoT38I | GRGCYC | 2 cut(s) | 503, 2589 |
| ErhI | CCWWGG | 4 cut(s) | 111, 2082, 2377, 3483 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3261, 3293 |
| FaqI | GGGAC | 3 cut(s) | 132, 379, 1208 |
| FauI | CCCGC | 1 cut(s) | 2005 |
| FauNDI | CATATG | 1 cut(s) | 2611 |
| FbaI | TGATCA | 4 cut(s) | 243, 1489, 2019, 2932 |
| FblI | GTMKAC | 2 cut(s) | 915, 3478 |
| FriOI | GRGCYC | 2 cut(s) | 503, 2589 |
| FspBI | CTAG | 7 cut(s) | 429, 1176, 1206, 1619, 2225, 2364, 3252 |
| GlaI | GCGC | 2 cut(s) | 895, 3380 |
| GsaI | CCCAGC | 1 cut(s) | 270 |
| GsuI | CTGGAG | 4 cut(s) | 156, 894, 2433, 3449 |
| HaeII | RGCGCY | 1 cut(s) | 897 |
| HaeIII | GGCC | 7 cut(s) | 116, 271, 1225, 2165, 2182, 2390, 2808 |
| HapII | CCGG | 5 cut(s) | 150, 208, 470, 946, 1596 |
| HgaI | GACGC | 1 cut(s) | 1759 |
| HhaI | GCGC | 2 cut(s) | 896, 3381 |
| Hin1I | GRCGYC | 1 cut(s) | 2403 |
| Hin6I | GCGC | 2 cut(s) | 894, 3379 |
| HinP1I | GCGC | 2 cut(s) | 894, 3379 |
| HincII | GTYRAC | 1 cut(s) | 3479 |
| HindII | GTYRAC | 1 cut(s) | 3479 |
| HindIII | AAGCTT | 2 cut(s) | 671, 1961 |
| HpaII | CCGG | 5 cut(s) | 150, 208, 470, 946, 1596 |
| HphI | GGTGA | 8 cut(s) | 974, 1002, 1166, 1548, 2158, 2519, 3206, 3207 |
| Hpy166II | GTNNAC | 3 cut(s) | 916, 2250, 3479 |
| Hpy8I | GTNNAC | 3 cut(s) | 916, 2250, 3479 |
| Hpy99I | CGWCG | 5 cut(s) | 253, 1524, 2408, 3083, 3322 |
| HpyCH4IV | ACGT | 5 cut(s) | 248, 1402, 1522, 1600, 2403 |
| HpySE526I | ACGT | 5 cut(s) | 248, 1402, 1522, 1600, 2403 |
| Hsp92I | GRCGYC | 1 cut(s) | 2403 |
| HspAI | GCGC | 2 cut(s) | 894, 3379 |
| Kpn2I | TCCGGA | 1 cut(s) | 469 |
| Ksp22I | TGATCA | 4 cut(s) | 243, 1489, 2019, 2932 |
| Lsp1109I | GCAGC | 8 cut(s) | 108, 988, 1158, 1214, 1252, 1600, 1831, 1909 |
| MabI | ACCWGGT | 1 cut(s) | 1708 |
| MaeI | CTAG | 7 cut(s) | 429, 1176, 1206, 1619, 2225, 2364, 3252 |
| MaeII | ACGT | 5 cut(s) | 248, 1402, 1522, 1600, 2403 |
| MflI | RGATCY | 3 cut(s) | 929, 1214, 1333 |
| MhlI | GDGCHC | 4 cut(s) | 503, 1468, 1528, 2589 |
| MlsI | TGGCCA | 1 cut(s) | 116 |
| MluNI | TGGCCA | 1 cut(s) | 116 |
| MlyI | GAGTC | 8 cut(s) | 93, 336, 391, 901, 1267, 2345, 2821, 2995 |
| MmeI | TCCRAC | 5 cut(s) | 117, 415, 1408, 1752, 3341 |
| Mox20I | TGGCCA | 1 cut(s) | 116 |
| Mph1103I | ATGCAT | 1 cut(s) | 3439 |
| MroI | TCCGGA | 1 cut(s) | 469 |
| MroXI | GAANNNNTTC | 4 cut(s) | 202, 524, 2602, 3150 |
| MscI | TGGCCA | 1 cut(s) | 116 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1941, 2505, 2710 |
| Msp20I | TGGCCA | 1 cut(s) | 116 |
| MspA1I | CMGCKG | 1 cut(s) | 1001 |
| MspCI | CTTAAG | 1 cut(s) | 1280 |
| MspI | CCGG | 5 cut(s) | 150, 208, 470, 946, 1596 |
| MspR9I | CCNGG | 5 cut(s) | 150, 208, 946, 1270, 1710 |
| Mva1269I | GAATGC | 1 cut(s) | 2158 |
| MvaI | CCWGG | 2 cut(s) | 1270, 1710 |
| NciI | CCSGG | 3 cut(s) | 150, 208, 946 |
| NcoI | CCATGG | 1 cut(s) | 111 |
| NdeI | CATATG | 1 cut(s) | 2611 |
| NlaIV | GGNNCC | 5 cut(s) | 20, 502, 2289, 3111, 3311 |
| NmuCI | GTSAC | 7 cut(s) | 475, 1008, 1631, 2086, 2731, 2863, 3298 |
| NsiI | ATGCAT | 1 cut(s) | 3439 |
| NspI | RCATGY | 2 cut(s) | 2361, 2949 |
| PaeI | GCATGC | 1 cut(s) | 2361 |
| PagI | TCATGA | 1 cut(s) | 1435 |
| PceI | AGGCCT | 1 cut(s) | 2808 |
| PciI | ACATGT | 1 cut(s) | 2945 |
| PctI | GAATGC | 1 cut(s) | 2158 |
| PdmI | GAANNNNTTC | 4 cut(s) | 202, 524, 2602, 3150 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2878 |
| PleI | GAGTC | 8 cut(s) | 93, 336, 390, 901, 1267, 2344, 2821, 2994 |
| PpsI | GAGTC | 8 cut(s) | 93, 336, 390, 901, 1267, 2344, 2821, 2994 |
| Ppu21I | YACGTR | 1 cut(s) | 1403 |
| PpuMI | RGGWCCY | 1 cut(s) | 18 |
| PscI | ACATGT | 1 cut(s) | 2945 |
| PshBI | ATTAAT | 2 cut(s) | 1413, 1827 |
| Psp124BI | GAGCTC | 1 cut(s) | 2589 |
| Psp5II | RGGWCCY | 1 cut(s) | 18 |
| Psp6I | CCWGG | 2 cut(s) | 1268, 1708 |
| PspFI | CCCAGC | 1 cut(s) | 266 |
| PspGI | CCWGG | 2 cut(s) | 1268, 1708 |
| PspN4I | GGNNCC | 5 cut(s) | 20, 502, 2289, 3111, 3311 |
| PspPI | GGNCC | 7 cut(s) | 18, 269, 1224, 1501, 2164, 2181, 3167 |
| PspPPI | RGGWCCY | 1 cut(s) | 18 |
| PstI | CTGCAG | 1 cut(s) | 126 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1217, 3263 |
| PsuI | RGATCY | 3 cut(s) | 929, 1214, 1333 |
| PvuII | CAGCTG | 1 cut(s) | 1001 |
| RsaI | GTAC | 6 cut(s) | 826, 1082, 2249, 2499, 2854, 3186 |
| RsaNI | GTAC | 6 cut(s) | 825, 1081, 2248, 2498, 2853, 3185 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1941, 2505, 2710 |
| SacI | GAGCTC | 1 cut(s) | 2589 |
| SalI | GTCGAC | 1 cut(s) | 3477 |
| Sau96I | GGNCC | 7 cut(s) | 18, 269, 1224, 1501, 2164, 2181, 3167 |
| ScaI | AGTACT | 1 cut(s) | 826 |
| SchI | GAGTC | 8 cut(s) | 93, 336, 391, 901, 1267, 2345, 2821, 2995 |
| ScrFI | CCNGG | 5 cut(s) | 150, 208, 946, 1270, 1710 |
| SduI | GDGCHC | 4 cut(s) | 503, 1468, 1528, 2589 |
| SexAI | ACCWGGT | 1 cut(s) | 1708 |
| SfcI | CTRYAG | 3 cut(s) | 122, 2295, 3231 |
| SinI | GGWCC | 3 cut(s) | 18, 1501, 3167 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1941, 2505, 2710 |
| SmlI | CTYRAG | 4 cut(s) | 462, 1280, 2519, 3278 |
| SmoI | CTYRAG | 4 cut(s) | 462, 1280, 2519, 3278 |
| SnaBI | TACGTA | 1 cut(s) | 1403 |
| SphI | GCATGC | 1 cut(s) | 2361 |
| SseBI | AGGCCT | 1 cut(s) | 2808 |
| SsiI | CCGC | 8 cut(s) | 103, 297, 873, 1222, 1873, 2009, 2012, 2355 |
| SspI | AATATT | 1 cut(s) | 1673 |
| SspMI | CTAG | 7 cut(s) | 429, 1176, 1206, 1619, 2225, 2364, 3252 |
| SstI | GAGCTC | 1 cut(s) | 2589 |
| StuI | AGGCCT | 1 cut(s) | 2808 |
| StyD4I | CCNGG | 5 cut(s) | 148, 206, 944, 1268, 1708 |
| StyI | CCWWGG | 4 cut(s) | 111, 2082, 2377, 3483 |
| TaiI | ACGT | 5 cut(s) | 251, 1405, 1525, 1603, 2406 |
| TaqI | TCGA | 8 cut(s) | 599, 746, 1650, 2266, 2406, 2830, 2989, 3478 |
| TatI | WGTACW | 4 cut(s) | 824, 2247, 2497, 3184 |
| TauI | GCSGC | 3 cut(s) | 300, 1225, 2012 |
| TscAI | CASTG | 9 cut(s) | 131, 352, 1948, 2095, 2191, 2484, 2661, 2842, 3339 |
| TseFI | GTSAC | 7 cut(s) | 475, 1008, 1631, 2086, 2731, 2863, 3298 |
| TseI | GCWGC | 8 cut(s) | 121, 1001, 1171, 1202, 1265, 1613, 1819, 1922 |
| Tsp45I | GTSAC | 7 cut(s) | 475, 1008, 1631, 2086, 2731, 2863, 3298 |
| TspGWI | ACGGA | 4 cut(s) | 1460, 2115, 3335, 3481 |
| TspRI | CASTG | 9 cut(s) | 131, 352, 1948, 2095, 2191, 2484, 2661, 2842, 3339 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2878 |
| Vha464I | CTTAAG | 1 cut(s) | 1280 |
| VpaK11BI | GGWCC | 3 cut(s) | 18, 1501, 3167 |
| VspI | ATTAAT | 2 cut(s) | 1413, 1827 |
| XapI | RAATTY | 5 cut(s) | 691, 1495, 1655, 2900, 3419 |
| XbaI | TCTAGA | 1 cut(s) | 428 |
| XceI | RCATGY | 2 cut(s) | 2361, 2949 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 1266, 1671, 3320 |
| XmiI | GTMKAC | 2 cut(s) | 915, 3478 |
| XmnI | GAANNNNTTC | 4 cut(s) | 202, 524, 2602, 3150 |
| XspI | CTAG | 7 cut(s) | 429, 1176, 1206, 1619, 2225, 2364, 3252 |
| ZraI | GACGTC | 1 cut(s) | 2404 |
| ZrmI | AGTACT | 1 cut(s) | 826 |
| Zsp2I | ATGCAT | 1 cut(s) | 3439 |