FvH4_2g36931

aarF domain-containing protein kinase At4g31390

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0001871
Physical Location & Seq
Reverse (-)
26967208 .. 26972107
4900 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g36931.t2

Sequence Viewer

Length: 2004 bp
ATGAATTCCATTTCTGTAAATTGCACCTGCGCTTCTCCCTTTCCCGCCAAGCACCTGAGCTCCGCCGGTCAAAGAAATGGACCGTCGGAGGCGTTTGATTACCGGCGAAGAGTCCGGAGATTCCGAGTTTCGAATGCCGCCACCGGAACGCGGCGGAGCTTGGCGTCGTCGAGCGGCGGCGAGGCCGGTTTCGGGAAGGTGATCAAGTCTAGCGACGCCATGGAGCAGCTCGACTTCGAGCGCGGCGTTTGCTTGCCGTTTCGCAAGTATACTCCCGAAACTGTGAGGAATAAGGTGTTGGAATCCAATGGGGCAGTTGCATCGCTAATTTCGAGAGGTGTGGAGATAGTATGGACTTTGGGCTTGTATTGGTCTACCTTGATGTATGACTACTTTGTGGGAAGGGATCAAGAAGTTGTACCAAAGCGTGCTCGACAGCTTAGAAATCTCCTGTGTGATTTGGGGCCTTCTTTCATCAAAGCTGGCCAGGTTCTTGCAAACAGACCTGATATTATAAGAGAAGATTACATGAATGAACTCTGCATACTCCAAGATGATGTTCCTCCCTTCCCAAATCAGGTCGCCTTTGAGATAATTGAAGAGGAGTTGGGTCAACCCCTTGAAGCTATATTCAGTAAAATTTCGTCACAGACAATAGCAGCTGCCAGTTTGGGTCAAGTTTACCGAGCTACTTTACGTGACACTGGCGAGGATGTAGCTATTAAGGTTCAAAGGCCACAGATAGAACCTATCATTTATAGGGATCTTTTTCTGTTCCGTACTCTTGCTTCATTCTTAAACGGAATCAGTCTACAGAAACTTGGGTGCAATGCTGAGCTCATTGTTGATGAATTCGGTGAGAAGCTTTTGGAGGAGCTTGATTACACTTTGGAAGCCCGCAATATTGAAGATTTTCTCGAGAACTTCAAAGATGACCCTACTGTCAAGATACCTGAGGTTTACAAACAGCTTTGTGGTCCACGTGTTCTAGTAATGGAGTGGATAGATGGTATCCGGTGCACTAACCCGCAGGCAATTAGAGAAGCTGGCATTGATGTGAATGGGTTCTTAACTGTTGGAGTCAGTGCTGCGTTGCGGCAGTTGCTGGAATTTGGATTGTTCCATGGAGATCCACATCCTGGAAATGTTTTTGCTATGCGTGATGGACGTATTGGATATGTAGACTTTGGGAATGTTGCTGTGCTTAGTCAGCAAAATAAACAGATTCTGATTGATGCCGTCGTCCATGCTGTAAACGAGGACTATGTTGAGATGGCGAACGATTTCACCAGGCTGGGCTTCTTGGCTCCTGGGACTGATGTCTCTCCTATTGTTCCAGCTCTAGAAGCAATCTGGCAGAACTCTCTCGGAAAAGGACTGTCTGACTTCAATTTTCGAAGTGTTACTGGGAAGTTTAATGAATTAGTTTACAACTATCCCATCCGTATTCCAGAGAGGTTTTCGCTTGTTATCAGATCTTTATTGACTCAAGAGGGTATCTGTTTTACTTTGCAACGAGACTTCAAATTTCTTGAGGTTGCTTATCCATATGTGGCAAAGCGCCTCCTAACAGATCCAAACCCGGCTCTGCGTGAACGCCTCATACAAGTACTATTTAAGGATGGTGTTTTCCAATGGAAGCGGCTAGAAAATCTCATTGTTCTTGCCAAAGAAAATGTGTCAATGATGAGCAGCAATCCTGCATTGCAAGCGAAAGAAATGCAAGGATCAAGAGTGTTGCCAGTTAACAAGAAACTGGACCTCACTGACACCATCAAAGATGGAGCTCGCCTATTCATCTTTGATGAAGGAATCCGTAGAAAGCTCATTCTTGCTTTGACGGAAGATTCAAAGCTTCACATAGAAGAGCTCGTGGATGTGTATAGACTGGTCGAAGATCAGATAGATATACAAACAGTTGCTGTGGAAGTAGCACGAGATTTTCCATCGTTTGTGCGAGATGTGATGCTTTCGTGGAGTGATGCGGTCTTAACTGATAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006464 GO:0006468 GO:0006725 GO:0006778 GO:0006787 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006979 GO:0006995 GO:0006996 GO:0007154 GO:0008150 GO:0008152 GO:0009056 GO:0009267 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009628 GO:0009635 GO:0009636 GO:0009637 GO:0009639 GO:0009657 GO:0009658 GO:0009668 GO:0009767 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0009987 GO:0009991 GO:0010027 GO:0010033 GO:0010035 GO:0010109 GO:0010114 GO:0010287 GO:0010380 GO:0015979 GO:0015994 GO:0015996 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019216 GO:0019222 GO:0019439 GO:0019538 GO:0019684 GO:0019747 GO:0022900 GO:0031279 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031537 GO:0031540 GO:0031667 GO:0031668 GO:0031669 GO:0033013 GO:0033015 GO:0033554 GO:0034641 GO:0036211 GO:0042221 GO:0042440 GO:0042594 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043562 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044270 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045828 GO:0045834 GO:0046149 GO:0046483 GO:0046700 GO:0046889 GO:0046890 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051186 GO:0051187 GO:0051193 GO:0051194 GO:0051716 GO:0055114 GO:0061024 GO:0065007 GO:0065009 GO:0071496 GO:0071704 GO:0071840 GO:0080090 GO:0080177 GO:0080183 GO:0090056 GO:0140096 GO:1901360 GO:1901361 GO:1901401 GO:1901403 GO:1901463 GO:1901465 GO:1901562 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1902171 GO:1902326 GO:1904143
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC1

Protein Analysis

668

Amino Acids

75.13

Weight (kDa)

5.31

Isoelectric Point (pI)

39.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC1 PF03109 50 - 294 2.7e-73 ABC1 atypical kinase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 515
AarI CACCTGC 1 cut(s) 35
AasI GACNNNNNNGTC 1 cut(s) 941
Acc36I ACCTGC 1 cut(s) 35
AccB7I CCANNNNNTGG 1 cut(s) 1139
AccBSI CCGCTC 1 cut(s) 174
AccI GTMKAC 4 cut(s) 269, 374, 811, 1182
AccII CGCG 2 cut(s) 151, 243
AccIII TCCGGA 1 cut(s) 114
AclWI GGATC 5 cut(s) 414, 771, 1124, 1568, 1735
AcoI YGGCCR 1 cut(s) 484
AcsI RAATTY 5 cut(s) 4, 639, 851, 1109, 1526
AcvI CACGTG 1 cut(s) 983
AcyI GRCGYC 2 cut(s) 164, 216
AfaI GTAC 3 cut(s) 420, 781, 1611
AfiI CCNNNNNNNGG 4 cut(s) 150, 192, 577, 1139
AflIII ACRYGT 1 cut(s) 982
AgsI TTSAA 8 cut(s) 599, 623, 731, 908, 928, 1390, 1525, 1851
AjnI CCWGG 4 cut(s) 486, 1138, 1289, 1309
AjuI GAANNNNNNNTTGG 4 cut(s) 281, 313, 543, 575
Alw21I GWGCWC 6 cut(s) 62, 433, 840, 1022, 1789, 1872
Alw26I GTCTC 2 cut(s) 1327, 1512
Alw44I GTGCAC 1 cut(s) 1018
AlwI GGATC 5 cut(s) 414, 771, 1124, 1568, 1735
AlwNI CAGNNNCTG 3 cut(s) 1105, 1228, 1922
Ama87I CYCGRG 1 cut(s) 917
Aor13HI TCCGGA 1 cut(s) 114
AoxI GGCC 4 cut(s) 183, 464, 484, 734
ApaLI GTGCAC 1 cut(s) 1018
ApeKI GCWGC 5 cut(s) 226, 659, 662, 1088, 1692
ApoI RAATTY 5 cut(s) 4, 639, 851, 1109, 1526
Asp700I GAANNNNTTC 3 cut(s) 912, 1064, 1283
AspLEI GCGC 3 cut(s) 32, 243, 1563
AspS9I GGNCC 4 cut(s) 80, 464, 977, 1759
AsuC2I CCSGG 1 cut(s) 1583
AsuHPI GGTGA 3 cut(s) 211, 869, 1279
AsuII TTCGAA 2 cut(s) 131, 1396
AvaI CYCGRG 1 cut(s) 917
AvaII GGWCC 3 cut(s) 80, 977, 1759
AxyI CCTNAGG 1 cut(s) 954
BaeGI GKGCMC 1 cut(s) 1022
BalI TGGCCA 1 cut(s) 486
BanII GRGCYC 4 cut(s) 62, 840, 1789, 1872
BarI GAAGNNNNNNTAC 2 cut(s) 772, 804
BauI CACGAG 2 cut(s) 1871, 1935
BbrPI CACGTG 1 cut(s) 983
Bbv12I GWGCWC 6 cut(s) 62, 433, 840, 1022, 1789, 1872
BbvI GCAGC 5 cut(s) 238, 649, 671, 1075, 1704
BccI CCATC 8 cut(s) 1001, 1157, 1267, 1448, 1616, 1775, 1781, 1954
BceAI ACGGC 2 cut(s) 241, 1223
BcgI CGANNNNNNTGC 4 cut(s) 303, 337, 1702, 1736
BciT130I CCWGG 4 cut(s) 488, 1140, 1291, 1311
BciVI GTATCC 1 cut(s) 1022
BclI TGATCA 1 cut(s) 201
BcnI CCSGG 1 cut(s) 1583
BcoDI GTCTC 2 cut(s) 1327, 1512
BfaI CTAG 4 cut(s) 210, 989, 1343, 1646
BfmI CTRYAG 1 cut(s) 812
BfoI RGCGCY 1 cut(s) 1564
BfuAI ACCTGC 1 cut(s) 35
BfuI GTATCC 1 cut(s) 1022
BglII AGATCT 1 cut(s) 1475
BlpI GCTNAGC 1 cut(s) 834
BmcAI AGTACT 1 cut(s) 1611
Bme1390I CCNGG 5 cut(s) 488, 1140, 1291, 1311, 1583
Bme18I GGWCC 3 cut(s) 80, 977, 1759
BmeT110I CYCGRG 1 cut(s) 917
BmgT120I GGNCC 4 cut(s) 80, 464, 977, 1759
BmiI GGNNCC 2 cut(s) 465, 1308
BmrFI CCNGG 5 cut(s) 488, 1140, 1291, 1311, 1583
BmrI ACTGGG 1 cut(s) 1416
BmsI GCATC 4 cut(s) 329, 1225, 1956, 1972
BmuI ACTGGG 1 cut(s) 1416
BoxI GACNNNNGTC 1 cut(s) 1319
Bpu10I CCTNAGC 1 cut(s) 56
Bpu1102I GCTNAGC 1 cut(s) 834
Bpu14I TTCGAA 2 cut(s) 131, 1396
BpuEI CTTGAG 2 cut(s) 1473, 1553
BpuMI CCSGG 1 cut(s) 1583
BsaAI YACGTR 2 cut(s) 698, 983
BsaBI GATNNNNATC 1 cut(s) 1134
BsaHI GRCGYC 2 cut(s) 164, 216
BsaJI CCNNGG 3 cut(s) 219, 1123, 1310
BsaWI WCCGGW 3 cut(s) 114, 143, 1014
BsaXI ACNNNNNCTCC 2 cut(s) 44, 74
Bsc4I CCNNNNNNNGG 4 cut(s) 150, 192, 577, 1139
Bse118I RCCGGY 3 cut(s) 65, 102, 185
Bse1I ACTGG 6 cut(s) 666, 709, 1411, 1742, 1761, 1893
Bse21I CCTNAGG 1 cut(s) 954
Bse3DI GCAATG 2 cut(s) 835, 1703
Bse8I GATNNNNATC 1 cut(s) 1134
BseAI TCCGGA 1 cut(s) 114
BseBI CCWGG 4 cut(s) 488, 1140, 1291, 1311
BseDI CCNNGG 3 cut(s) 219, 1123, 1310
BseGI GGATG 5 cut(s) 718, 1135, 1440, 1627, 1882
BseJI GATNNNNATC 1 cut(s) 1134
BseLI CCNNNNNNNGG 4 cut(s) 150, 192, 577, 1139
BseMI GCAATG 2 cut(s) 835, 1703
BseMII CTCAG 3 cut(s) 47, 825, 945
BseNI ACTGG 6 cut(s) 666, 709, 1411, 1742, 1761, 1893
BseRI GAGGAG 2 cut(s) 617, 887
BseSI GKGCMC 1 cut(s) 1022
BseXI GCAGC 5 cut(s) 238, 649, 671, 1075, 1704
BseYI CCCAGC 1 cut(s) 1294
Bsh1236I CGCG 2 cut(s) 151, 243
BshFI GGCC 4 cut(s) 185, 466, 486, 736
BsiHKAI GWGCWC 6 cut(s) 62, 433, 840, 1022, 1789, 1872
BsiHKCI CYCGRG 1 cut(s) 917
BsiSI CCGG 7 cut(s) 66, 103, 115, 144, 186, 1015, 1583
BslFI GGGAC 1 cut(s) 1327
BslI CCNNNNNNNGG 4 cut(s) 150, 192, 577, 1139
BsmAI GTCTC 2 cut(s) 1327, 1512
BsmFI GGGAC 1 cut(s) 1327
BsmI GAATGC 1 cut(s) 139
BsnI GGCC 4 cut(s) 185, 466, 486, 736
BsoBI CYCGRG 1 cut(s) 917
Bsp119I TTCGAA 2 cut(s) 131, 1396
Bsp1286I GDGCHC 6 cut(s) 62, 433, 840, 1022, 1789, 1872
Bsp13I TCCGGA 1 cut(s) 114
Bsp143I GATC 8 cut(s) 201, 406, 763, 1129, 1475, 1573, 1727, 1897
Bsp1720I GCTNAGC 1 cut(s) 834
Bsp19I CCATGG 2 cut(s) 219, 1123
BspANI GGCC 4 cut(s) 185, 466, 486, 736
BspCNI CTCAG 3 cut(s) 48, 826, 946
BspEI TCCGGA 1 cut(s) 114
BspFNI CGCG 2 cut(s) 151, 243
BspLI GGNNCC 2 cut(s) 465, 1308
BspMI ACCTGC 1 cut(s) 35
BspPI GGATC 5 cut(s) 414, 771, 1124, 1568, 1735
BspQI GCTCTTC 1 cut(s) 1860
BspT104I TTCGAA 2 cut(s) 131, 1396
BsrBI CCGCTC 1 cut(s) 174
BsrDI GCAATG 2 cut(s) 835, 1703
BsrFI RCCGGY 3 cut(s) 65, 102, 185
BsrI ACTGG 6 cut(s) 666, 709, 1411, 1742, 1761, 1893
BssAI RCCGGY 3 cut(s) 65, 102, 185
BssECI CCNNGG 3 cut(s) 219, 1123, 1310
BssMI GATC 8 cut(s) 201, 406, 763, 1129, 1475, 1573, 1727, 1897
BssNAI GTATAC 1 cut(s) 270
BssNI GRCGYC 2 cut(s) 164, 216
BssSI CACGAG 2 cut(s) 1871, 1935
BssT1I CCWWGG 2 cut(s) 219, 1123
Bst1107I GTATAC 1 cut(s) 270
Bst2BI CACGAG 2 cut(s) 1871, 1935
Bst2UI CCWGG 4 cut(s) 488, 1140, 1291, 1311
Bst4CI ACNGT 6 cut(s) 84, 283, 943, 1075, 1380, 1918
Bst6I CTCTTC 3 cut(s) 103, 594, 1860
BstACI GRCGYC 2 cut(s) 164, 216
BstBAI YACGTR 2 cut(s) 698, 983
BstBI TTCGAA 2 cut(s) 131, 1396
BstC8I GCNNGC 8 cut(s) 254, 429, 484, 898, 1032, 1048, 1710, 1789
BstDEI CTNAG 5 cut(s) 56, 440, 834, 954, 1205
BstDSI CCRYGG 2 cut(s) 219, 1123
BstF5I GGATG 5 cut(s) 718, 1135, 1440, 1627, 1882
BstFNI CGCG 2 cut(s) 151, 243
BstH2I RGCGCY 1 cut(s) 1564
BstHHI GCGC 3 cut(s) 32, 243, 1563
BstKTI GATC 8 cut(s) 204, 409, 766, 1132, 1478, 1576, 1730, 1900
BstMAI GTCTC 2 cut(s) 1327, 1512
BstMBI GATC 8 cut(s) 201, 406, 763, 1129, 1475, 1573, 1727, 1897
BstMWI GCNNNNNNNGC 5 cut(s) 249, 1102, 1210, 1346, 1709
BstNI CCWGG 4 cut(s) 488, 1140, 1291, 1311
BstPAI GACNNNNGTC 1 cut(s) 1319
BstSCI CCNGG 5 cut(s) 486, 1138, 1289, 1309, 1581
BstSFI CTRYAG 1 cut(s) 812
BstSLI GKGCMC 1 cut(s) 1022
BstUI CGCG 2 cut(s) 151, 243
BstV1I GCAGC 5 cut(s) 238, 649, 671, 1075, 1704
BstX2I RGATCY 4 cut(s) 763, 1129, 1475, 1573
BstYI RGATCY 4 cut(s) 763, 1129, 1475, 1573
BstZ17I GTATAC 1 cut(s) 270
Bsu36I CCTNAGG 1 cut(s) 954
BsuI GTATCC 1 cut(s) 1022
BsuRI GGCC 4 cut(s) 185, 466, 486, 736
BtgI CCRYGG 2 cut(s) 219, 1123
BtgZI GCGATG 1 cut(s) 306
BtsCI GGATG 5 cut(s) 718, 1135, 1440, 1627, 1882
BtsIMutI CAGTG 3 cut(s) 702, 1090, 1764
BveI ACCTGC 1 cut(s) 35
Cac8I GCNNGC 8 cut(s) 254, 429, 484, 898, 1032, 1048, 1710, 1789
CaiI CAGNNNCTG 3 cut(s) 1105, 1228, 1922
CfoI GCGC 3 cut(s) 32, 243, 1563
Cfr10I RCCGGY 3 cut(s) 65, 102, 185
Cfr13I GGNCC 4 cut(s) 80, 464, 977, 1759
CseI GACGC 2 cut(s) 153, 224
Csp6I GTAC 3 cut(s) 419, 780, 1610
CviAII CATG 4 cut(s) 220, 529, 1124, 1247
CviQI GTAC 3 cut(s) 419, 780, 1610
DdeI CTNAG 5 cut(s) 56, 440, 834, 954, 1205
DpnI GATC 8 cut(s) 203, 408, 765, 1131, 1477, 1575, 1729, 1899
DpnII GATC 8 cut(s) 201, 406, 763, 1129, 1475, 1573, 1727, 1897
DrdI GACNNNNNNGTC 1 cut(s) 941
DseDI GACNNNNNNGTC 1 cut(s) 941
EaeI YGGCCR 1 cut(s) 484
Eam1104I CTCTTC 3 cut(s) 103, 594, 1860
EarI CTCTTC 3 cut(s) 103, 594, 1860
EciI GGCGGA 2 cut(s) 52, 169
Ecl136II GAGCTC 4 cut(s) 60, 838, 1787, 1870
Eco130I CCWWGG 2 cut(s) 219, 1123
Eco24I GRGCYC 4 cut(s) 62, 840, 1789, 1872
Eco47I GGWCC 3 cut(s) 80, 977, 1759
Eco53kI GAGCTC 4 cut(s) 60, 838, 1787, 1870
Eco72I CACGTG 1 cut(s) 983
Eco81I CCTNAGG 1 cut(s) 954
Eco88I CYCGRG 1 cut(s) 917
EcoICRI GAGCTC 4 cut(s) 60, 838, 1787, 1870
EcoO109I RGGNCCY 1 cut(s) 464
EcoRI GAATTC 2 cut(s) 4, 851
EcoRII CCWGG 4 cut(s) 486, 1138, 1289, 1309
EcoT14I CCWWGG 2 cut(s) 219, 1123
EcoT38I GRGCYC 4 cut(s) 62, 840, 1789, 1872
ErhI CCWWGG 2 cut(s) 219, 1123
FaeI CATG 4 cut(s) 223, 532, 1127, 1250
FaqI GGGAC 1 cut(s) 1327
FatI CATG 4 cut(s) 219, 528, 1123, 1246
FauI CCCGC 3 cut(s) 52, 905, 1035
FauNDI CATATG 1 cut(s) 1549
FbaI TGATCA 1 cut(s) 201
FblI GTMKAC 4 cut(s) 269, 374, 811, 1182
FokI GGATG 5 cut(s) 725, 1122, 1427, 1634, 1889
FriOI GRGCYC 4 cut(s) 62, 840, 1789, 1872
FspBI CTAG 4 cut(s) 210, 989, 1343, 1646
GlaI GCGC 3 cut(s) 31, 242, 1562
GsaI CCCAGC 1 cut(s) 1298
HaeII RGCGCY 1 cut(s) 1564
HaeIII GGCC 4 cut(s) 185, 466, 486, 736
HapII CCGG 7 cut(s) 66, 103, 115, 144, 186, 1015, 1583
HgaI GACGC 2 cut(s) 153, 224
HhaI GCGC 3 cut(s) 32, 243, 1563
Hin1I GRCGYC 2 cut(s) 164, 216
Hin1II CATG 4 cut(s) 223, 532, 1127, 1250
Hin6I GCGC 3 cut(s) 30, 241, 1561
HinP1I GCGC 3 cut(s) 30, 241, 1561
HincII GTYRAC 2 cut(s) 614, 1747
HindII GTYRAC 2 cut(s) 614, 1747
HindIII AAGCTT 2 cut(s) 863, 1853
HinfI GANTC 9 cut(s) 111, 120, 302, 804, 1080, 1225, 1486, 1812, 1847
HpaI GTTAAC 1 cut(s) 1747
HpaII CCGG 7 cut(s) 66, 103, 115, 144, 186, 1015, 1583
HphI GGTGA 3 cut(s) 211, 869, 1279
Hpy188I TCNGA 7 cut(s) 88, 125, 1230, 1370, 1384, 1475, 1902
Hpy99I CGWCG 5 cut(s) 88, 169, 172, 218, 1244
HpyAV CCTTC 5 cut(s) 190, 396, 477, 577, 1802
HpyCH4III ACNGT 6 cut(s) 84, 283, 943, 1075, 1380, 1918
HpyCH4IV ACGT 3 cut(s) 697, 982, 1168
HpyF10VI GCNNNNNNNGC 5 cut(s) 249, 1102, 1210, 1346, 1709
HpyF3I CTNAG 5 cut(s) 56, 440, 834, 954, 1205
HpySE526I ACGT 3 cut(s) 697, 982, 1168
Hsp92I GRCGYC 2 cut(s) 164, 216
Hsp92II CATG 4 cut(s) 223, 532, 1127, 1250
HspAI GCGC 3 cut(s) 30, 241, 1561
Kpn2I TCCGGA 1 cut(s) 114
Ksp22I TGATCA 1 cut(s) 201
KspAI GTTAAC 1 cut(s) 1747
Kzo9I GATC 8 cut(s) 201, 406, 763, 1129, 1475, 1573, 1727, 1897
LguI GCTCTTC 1 cut(s) 1860
LmnI GCTCC 6 cut(s) 65, 156, 223, 874, 1312, 1784
Lsp1109I GCAGC 5 cut(s) 238, 649, 671, 1075, 1704
LweI GCATC 4 cut(s) 329, 1225, 1956, 1972
MaeI CTAG 4 cut(s) 210, 989, 1343, 1646
MaeII ACGT 3 cut(s) 697, 982, 1168
MaeIII GTNAC 3 cut(s) 645, 698, 1402
MalI GATC 8 cut(s) 203, 408, 765, 1131, 1477, 1575, 1729, 1899
MbiI CCGCTC 1 cut(s) 174
MboI GATC 8 cut(s) 201, 406, 763, 1129, 1475, 1573, 1727, 1897
MboII GAAGA 7 cut(s) 120, 533, 611, 920, 1856, 1877, 1907
MflI RGATCY 4 cut(s) 763, 1129, 1475, 1573
MhlI GDGCHC 6 cut(s) 62, 433, 840, 1022, 1789, 1872
MlsI TGGCCA 1 cut(s) 486
MluNI TGGCCA 1 cut(s) 486
MlyI GAGTC 3 cut(s) 120, 1089, 1480
MmeI TCCRAC 3 cut(s) 66, 279, 1057
Mox20I TGGCCA 1 cut(s) 486
MroI TCCGGA 1 cut(s) 114
MroXI GAANNNNTTC 3 cut(s) 912, 1064, 1283
MscI TGGCCA 1 cut(s) 486
MseI TTAA 7 cut(s) 723, 797, 1070, 1416, 1617, 1746, 1991
MslI CAYNNNNRTG 1 cut(s) 1055
Msp20I TGGCCA 1 cut(s) 486
MspA1I CMGCKG 1 cut(s) 662
MspI CCGG 7 cut(s) 66, 103, 115, 144, 186, 1015, 1583
MspR9I CCNGG 5 cut(s) 488, 1140, 1291, 1311, 1583
Mva1269I GAATGC 1 cut(s) 139
MvaI CCWGG 4 cut(s) 488, 1140, 1291, 1311
MvnI CGCG 2 cut(s) 151, 243
MwoI GCNNNNNNNGC 5 cut(s) 249, 1102, 1210, 1346, 1709
NciI CCSGG 1 cut(s) 1583
NcoI CCATGG 2 cut(s) 219, 1123
NdeI CATATG 1 cut(s) 1549
NdeII GATC 8 cut(s) 201, 406, 763, 1129, 1475, 1573, 1727, 1897
NlaIII CATG 4 cut(s) 223, 532, 1127, 1250
NlaIV GGNNCC 2 cut(s) 465, 1308
NmuCI GTSAC 2 cut(s) 645, 698
NspV TTCGAA 2 cut(s) 131, 1396
PaeR7I CTCGAG 1 cut(s) 917
PaqCI CACCTGC 1 cut(s) 35
PciSI GCTCTTC 1 cut(s) 1860
PcsI WCGNNNNNNNCGW 2 cut(s) 243, 329
PctI GAATGC 1 cut(s) 139
PdmI GAANNNNTTC 3 cut(s) 912, 1064, 1283
PfeI GAWTC 6 cut(s) 120, 302, 804, 1225, 1812, 1847
PflMI CCANNNNNTGG 1 cut(s) 1139
PfoI TCCNGGA 1 cut(s) 1138
PleI GAGTC 3 cut(s) 119, 1088, 1480
PmaCI CACGTG 1 cut(s) 983
PmlI CACGTG 1 cut(s) 983
PpsI GAGTC 3 cut(s) 119, 1088, 1480
Ppu21I YACGTR 2 cut(s) 698, 983
PshAI GACNNNNGTC 1 cut(s) 1319
PsiI TTATAA 1 cut(s) 515
Psp124BI GAGCTC 4 cut(s) 62, 840, 1789, 1872
Psp6I CCWGG 4 cut(s) 486, 1138, 1289, 1309
PspCI CACGTG 1 cut(s) 983
PspFI CCCAGC 1 cut(s) 1294
PspGI CCWGG 4 cut(s) 486, 1138, 1289, 1309
PspN4I GGNNCC 2 cut(s) 465, 1308
PspPI GGNCC 4 cut(s) 80, 464, 977, 1759
PsrI GAACNNNNNNTAC 4 cut(s) 528, 560, 1587, 1619
PstNI CAGNNNCTG 3 cut(s) 1105, 1228, 1922
PsuI RGATCY 4 cut(s) 763, 1129, 1475, 1573
PvuII CAGCTG 1 cut(s) 662
RsaI GTAC 3 cut(s) 420, 781, 1611
RsaNI GTAC 3 cut(s) 419, 780, 1610
RseI CAYNNNNRTG 1 cut(s) 1055
SacI GAGCTC 4 cut(s) 62, 840, 1789, 1872
SapI GCTCTTC 1 cut(s) 1860
SaqAI TTAA 7 cut(s) 723, 797, 1070, 1416, 1617, 1746, 1991
Sau3AI GATC 8 cut(s) 201, 406, 763, 1129, 1475, 1573, 1727, 1897
Sau96I GGNCC 4 cut(s) 80, 464, 977, 1759
ScaI AGTACT 1 cut(s) 1611
SchI GAGTC 3 cut(s) 120, 1089, 1480
ScrFI CCNGG 5 cut(s) 488, 1140, 1291, 1311, 1583
SduI GDGCHC 6 cut(s) 62, 433, 840, 1022, 1789, 1872
SfaNI GCATC 4 cut(s) 329, 1225, 1956, 1972
SfcI CTRYAG 1 cut(s) 812
Sfr274I CTCGAG 1 cut(s) 917
SfuI TTCGAA 2 cut(s) 131, 1396
SinI GGWCC 3 cut(s) 80, 977, 1759
SlaI CTCGAG 1 cut(s) 917
SmiMI CAYNNNNRTG 1 cut(s) 1055
SmlI CTYRAG 3 cut(s) 917, 1488, 1532
SmoI CTYRAG 3 cut(s) 917, 1488, 1532
SspI AATATT 1 cut(s) 904
SspMI CTAG 4 cut(s) 210, 989, 1343, 1646
SstI GAGCTC 4 cut(s) 62, 840, 1789, 1872
StyD4I CCNGG 5 cut(s) 486, 1138, 1289, 1309, 1581
StyI CCWWGG 2 cut(s) 219, 1123
TaaI ACNGT 6 cut(s) 84, 283, 943, 1075, 1380, 1918
TaiI ACGT 3 cut(s) 700, 985, 1171
TaqI TCGA 9 cut(s) 131, 170, 231, 237, 332, 433, 918, 1396, 1893
TatI WGTACW 1 cut(s) 1609
TauI GCSGC 7 cut(s) 140, 154, 177, 180, 246, 1099, 1645
TfiI GAWTC 6 cut(s) 120, 302, 804, 1225, 1812, 1847
Tru1I TTAA 7 cut(s) 723, 797, 1070, 1416, 1617, 1746, 1991
Tru9I TTAA 7 cut(s) 723, 797, 1070, 1416, 1617, 1746, 1991
TscAI CASTG 3 cut(s) 709, 1090, 1771
TseFI GTSAC 2 cut(s) 645, 698
TseI GCWGC 5 cut(s) 226, 659, 662, 1088, 1692
Tsp45I GTSAC 2 cut(s) 645, 698
TspDTI ATGAA 9 cut(s) 17, 463, 545, 549, 780, 864, 1434, 1786, 1821
TspGWI ACGGA 5 cut(s) 767, 816, 1433, 1805, 1856
TspRI CASTG 3 cut(s) 709, 1090, 1771
Van91I CCANNNNNTGG 1 cut(s) 1139
VneI GTGCAC 1 cut(s) 1018
VpaK11BI GGWCC 3 cut(s) 80, 977, 1759
XapI RAATTY 5 cut(s) 4, 639, 851, 1109, 1526
XbaI TCTAGA 1 cut(s) 1342
XhoI CTCGAG 1 cut(s) 917
XmiI GTMKAC 4 cut(s) 269, 374, 811, 1182
XmnI GAANNNNTTC 3 cut(s) 912, 1064, 1283
XspI CTAG 4 cut(s) 210, 989, 1343, 1646
ZrmI AGTACT 1 cut(s) 1611
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.