aarF domain-containing protein kinase At4g31390
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G31390 AT4G31390 AT4G31390 |
| fragaria_vesca | FvH4_2g36930 FvH4_2g36930 FvH4_2g36930 FvH4_2g36930 FvH4_2g36930 FvH4_2g36930 FvH4_2g36931 FvH4_2g36931 FvH4_2g36931 FvH4_2g36931 FvH4_2g36931 FvH4_2g36931 |
| malus_domestica | MD08G1131400.v1.1 MD15G1109000.v1.1 MD15G1109100.v1.1 |
| prunus_persica | Prupe.1G461300_v2.0.a1 Prupe.1G461300_v2.0.a1 Prupe.1G461300_v2.0.a1 |
| pyrus_communis | pycom08g11010 pycom15g09950 |
| rosa_chinensis | RchiOBHm_Chr6g0304841 RchiOBHm_Chr6g0304851 |
| rosa_laevigata | RLG00000010945 |
| rosa_multiflora | Rmu_sc0010715.1_g000003 Rmu_sc0010715.1_g000004 Rmu_sc0030552.1_g000002 Rmu_sc0030552.1_g000003 Rmu_ssc0000278.1_g000008 |
| rosa_roxburghii | Rroxscaffold_7G00163410 Rroxscaffold_7G00163420 |
| rosa_rugosa | Rorug06G0335300 Rorug06G0335300 Rorug06G0335300 Rorug06G0335400 Rorug06G0335500 Rorug06G0335600 Rorug06G0335600 |
| rosa_samantha | Rh6AG446900 Rh6BG454700 Rh6CG460400 Rh6DG447400 |
| rosa_wichuraiana | Rw6G038890 Rw6G038900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 443 |
| Acc36I | ACCTGC | 1 cut(s) | 225 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1187 |
| AccBSI | CCGCTC | 1 cut(s) | 222 |
| AccI | GTMKAC | 2 cut(s) | 859, 1476 |
| AccII | CGCG | 1 cut(s) | 382 |
| AciI | CCGC | 9 cut(s) | 192, 205, 222, 225, 264, 310, 946, 1144, 1690 |
| AclI | AACGTT | 1 cut(s) | 180 |
| AclWI | GGATC | 6 cut(s) | 819, 977, 1172, 1616, 1629, 1953 |
| AcoI | YGGCCR | 1 cut(s) | 532 |
| AcsI | RAATTY | 7 cut(s) | 687, 899, 996, 1157, 1272, 1574, 1860 |
| AcuI | CTGAAG | 1 cut(s) | 1947 |
| AcvI | CACGTG | 1 cut(s) | 1031 |
| AfaI | GTAC | 5 cut(s) | 128, 317, 416, 829, 1959 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 625, 784, 1187, 1618, 1654 |
| AflIII | ACRYGT | 1 cut(s) | 1030 |
| AgsI | TTSAA | 8 cut(s) | 599, 637, 847, 956, 976, 1573, 1899, 1913 |
| AjnI | CCWGG | 3 cut(s) | 534, 1186, 1357 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 329, 361 |
| Alw21I | GWGCWC | 4 cut(s) | 70, 481, 1070, 1837 |
| Alw26I | GTCTC | 4 cut(s) | 148, 375, 699, 1375 |
| Alw44I | GTGCAC | 1 cut(s) | 1066 |
| AlwI | GGATC | 6 cut(s) | 819, 977, 1172, 1616, 1629, 1953 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 868, 1970 |
| Ama87I | CYCGRG | 3 cut(s) | 61, 1002, 1983 |
| AoxI | GGCC | 3 cut(s) | 512, 532, 782 |
| ApaLI | GTGCAC | 1 cut(s) | 1066 |
| ApeKI | GCWGC | 7 cut(s) | 274, 484, 707, 710, 1136, 1561, 1740 |
| ApoI | RAATTY | 7 cut(s) | 687, 899, 996, 1157, 1272, 1574, 1860 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 170, 202 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 465, 1860 |
| AspLEI | GCGC | 3 cut(s) | 100, 263, 1611 |
| AspS9I | GGNCC | 4 cut(s) | 512, 775, 1025, 1807 |
| AsuC2I | CCSGG | 2 cut(s) | 809, 1456 |
| AsuHPI | GGTGA | 3 cut(s) | 239, 917, 992 |
| AsuII | TTCGAA | 3 cut(s) | 136, 176, 285 |
| AvaI | CYCGRG | 3 cut(s) | 61, 1002, 1983 |
| AvaII | GGWCC | 3 cut(s) | 775, 1025, 1807 |
| BaeGI | GKGCMC | 1 cut(s) | 1070 |
| BalI | TGGCCA | 1 cut(s) | 534 |
| BamHI | GGATCC | 1 cut(s) | 1621 |
| BanII | GRGCYC | 2 cut(s) | 70, 1837 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 425, 457, 820, 852 |
| BbrPI | CACGTG | 1 cut(s) | 1031 |
| Bbv12I | GWGCWC | 4 cut(s) | 70, 481, 1070, 1837 |
| BbvI | GCAGC | 7 cut(s) | 286, 496, 697, 719, 1123, 1573, 1752 |
| BceAI | ACGGC | 2 cut(s) | 85, 289 |
| BciT130I | CCWGG | 3 cut(s) | 536, 1188, 1359 |
| BciVI | GTATCC | 1 cut(s) | 1505 |
| BcnI | CCSGG | 2 cut(s) | 809, 1456 |
| BcoDI | GTCTC | 4 cut(s) | 148, 375, 699, 1375 |
| BfaI | CTAG | 5 cut(s) | 258, 668, 1037, 1154, 1694 |
| BfmI | CTRYAG | 1 cut(s) | 860 |
| BfoI | RGCGCY | 2 cut(s) | 264, 1612 |
| BfuAI | ACCTGC | 1 cut(s) | 225 |
| BfuI | GTATCC | 1 cut(s) | 1505 |
| BglII | AGATCT | 1 cut(s) | 2008 |
| BlpI | GCTNAGC | 1 cut(s) | 882 |
| Bme1390I | CCNGG | 5 cut(s) | 536, 809, 1188, 1359, 1456 |
| Bme18I | GGWCC | 3 cut(s) | 775, 1025, 1807 |
| BmeT110I | CYCGRG | 3 cut(s) | 61, 1002, 1983 |
| BmgT120I | GGNCC | 4 cut(s) | 512, 775, 1025, 1807 |
| BmiI | GGNNCC | 4 cut(s) | 243, 513, 1356, 1623 |
| BmrFI | CCNGG | 5 cut(s) | 536, 809, 1188, 1359, 1456 |
| BmrI | ACTGGG | 1 cut(s) | 878 |
| BmsI | GCATC | 5 cut(s) | 861, 1081, 1273, 1554, 2004 |
| BmuI | ACTGGG | 1 cut(s) | 878 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1367 |
| BpmI | CTGGAG | 1 cut(s) | 774 |
| Bpu10I | CCTNAGC | 1 cut(s) | 56 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 882 |
| Bpu14I | TTCGAA | 3 cut(s) | 136, 176, 285 |
| BpuEI | CTTGAG | 2 cut(s) | 1521, 1601 |
| BpuMI | CCSGG | 2 cut(s) | 809, 1456 |
| Bsa29I | ATCGAT | 2 cut(s) | 1281, 1397 |
| BsaAI | YACGTR | 4 cut(s) | 746, 1031, 1228, 1640 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1182 |
| BsaI | GGTCTC | 1 cut(s) | 148 |
| BsaJI | CCNNGG | 4 cut(s) | 267, 1001, 1171, 1358 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 211, 241, 383, 413, 747, 777 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 625, 784, 1187, 1618, 1654 |
| Bse1I | ACTGG | 5 cut(s) | 422, 714, 873, 1809, 1941 |
| Bse3DI | GCAATG | 2 cut(s) | 883, 1139 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1182 |
| BseBI | CCWGG | 3 cut(s) | 536, 1188, 1359 |
| BseCI | ATCGAT | 2 cut(s) | 1281, 1397 |
| BseDI | CCNNGG | 4 cut(s) | 267, 1001, 1171, 1358 |
| BseGI | GGATG | 5 cut(s) | 188, 460, 1183, 1488, 1930 |
| BseJI | GATNNNNATC | 1 cut(s) | 1182 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 625, 784, 1187, 1618, 1654 |
| BseMI | GCAATG | 2 cut(s) | 883, 1139 |
| BseMII | CTCAG | 1 cut(s) | 873 |
| BseNI | ACTGG | 5 cut(s) | 422, 714, 873, 1809, 1941 |
| BseRI | GAGGAG | 2 cut(s) | 223, 935 |
| BseSI | GKGCMC | 1 cut(s) | 1070 |
| BseXI | GCAGC | 7 cut(s) | 286, 496, 697, 719, 1123, 1573, 1752 |
| BseYI | CCCAGC | 1 cut(s) | 1630 |
| Bsh1236I | CGCG | 1 cut(s) | 382 |
| BshFI | GGCC | 3 cut(s) | 514, 534, 784 |
| BshVI | ATCGAT | 2 cut(s) | 1281, 1397 |
| BsiHKAI | GWGCWC | 4 cut(s) | 70, 481, 1070, 1837 |
| BsiHKCI | CYCGRG | 3 cut(s) | 61, 1002, 1983 |
| BsiSI | CCGG | 3 cut(s) | 785, 808, 1455 |
| BslFI | GGGAC | 1 cut(s) | 1375 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 625, 784, 1187, 1618, 1654 |
| BsmAI | GTCTC | 4 cut(s) | 148, 375, 699, 1375 |
| BsmBI | CGTCTC | 1 cut(s) | 699 |
| BsmFI | GGGAC | 1 cut(s) | 1375 |
| BsmI | GAATGC | 2 cut(s) | 591, 1751 |
| BsnI | GGCC | 3 cut(s) | 514, 534, 784 |
| Bso31I | GGTCTC | 1 cut(s) | 148 |
| BsoBI | CYCGRG | 3 cut(s) | 61, 1002, 1983 |
| Bsp119I | TTCGAA | 3 cut(s) | 136, 176, 285 |
| Bsp1286I | GDGCHC | 4 cut(s) | 70, 481, 1070, 1837 |
| Bsp143I | GATC | 7 cut(s) | 811, 982, 1177, 1278, 1621, 1945, 2008 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 882 |
| Bsp19I | CCATGG | 2 cut(s) | 267, 1171 |
| Bsp68I | TCGCGA | 1 cut(s) | 382 |
| BspACI | CCGC | 9 cut(s) | 192, 205, 222, 225, 264, 310, 946, 1144, 1690 |
| BspANI | GGCC | 3 cut(s) | 514, 534, 784 |
| BspCNI | CTCAG | 1 cut(s) | 874 |
| BspDI | ATCGAT | 2 cut(s) | 1281, 1397 |
| BspFNI | CGCG | 1 cut(s) | 382 |
| BspLI | GGNNCC | 4 cut(s) | 243, 513, 1356, 1623 |
| BspMI | ACCTGC | 1 cut(s) | 225 |
| BspPI | GGATC | 6 cut(s) | 819, 977, 1172, 1616, 1629, 1953 |
| BspT104I | TTCGAA | 3 cut(s) | 136, 176, 285 |
| BspTNI | GGTCTC | 1 cut(s) | 148 |
| BsrBI | CCGCTC | 1 cut(s) | 222 |
| BsrDI | GCAATG | 2 cut(s) | 883, 1139 |
| BsrI | ACTGG | 5 cut(s) | 422, 714, 873, 1809, 1941 |
| BssECI | CCNNGG | 4 cut(s) | 267, 1001, 1171, 1358 |
| BssMI | GATC | 7 cut(s) | 811, 982, 1177, 1278, 1621, 1945, 2008 |
| BssT1I | CCWWGG | 2 cut(s) | 267, 1171 |
| Bst2UI | CCWGG | 3 cut(s) | 536, 1188, 1359 |
| Bst4CI | ACNGT | 6 cut(s) | 159, 588, 991, 1123, 1428, 1999 |
| Bst6I | CTCTTC | 1 cut(s) | 642 |
| BstBAI | YACGTR | 4 cut(s) | 746, 1031, 1228, 1640 |
| BstBI | TTCGAA | 3 cut(s) | 136, 176, 285 |
| BstC8I | GCNNGC | 4 cut(s) | 302, 532, 946, 1837 |
| BstDEI | CTNAG | 4 cut(s) | 56, 488, 882, 1253 |
| BstDSI | CCRYGG | 2 cut(s) | 267, 1171 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1652 |
| BstF5I | GGATG | 5 cut(s) | 188, 460, 1183, 1488, 1930 |
| BstFNI | CGCG | 1 cut(s) | 382 |
| BstH2I | RGCGCY | 2 cut(s) | 264, 1612 |
| BstHHI | GCGC | 3 cut(s) | 100, 263, 1611 |
| BstKTI | GATC | 7 cut(s) | 814, 985, 1180, 1281, 1624, 1948, 2011 |
| BstMAI | GTCTC | 4 cut(s) | 148, 375, 699, 1375 |
| BstMBI | GATC | 7 cut(s) | 811, 982, 1177, 1278, 1621, 1945, 2008 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 21, 191, 219, 231, 1150, 1757 |
| BstNI | CCWGG | 3 cut(s) | 536, 1188, 1359 |
| BstNSI | RCATGY | 1 cut(s) | 1771 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1367 |
| BstSCI | CCNGG | 5 cut(s) | 534, 807, 1186, 1357, 1454 |
| BstSFI | CTRYAG | 1 cut(s) | 860 |
| BstSLI | GKGCMC | 1 cut(s) | 1070 |
| BstUI | CGCG | 1 cut(s) | 382 |
| BstV1I | GCAGC | 7 cut(s) | 286, 496, 697, 719, 1123, 1573, 1752 |
| BstX2I | RGATCY | 4 cut(s) | 811, 1177, 1621, 2008 |
| BstYI | RGATCY | 4 cut(s) | 811, 1177, 1621, 2008 |
| Bsu15I | ATCGAT | 2 cut(s) | 1281, 1397 |
| BsuI | GTATCC | 1 cut(s) | 1505 |
| BsuRI | GGCC | 3 cut(s) | 514, 534, 784 |
| BsuTUI | ATCGAT | 2 cut(s) | 1281, 1397 |
| BtgI | CCRYGG | 2 cut(s) | 267, 1171 |
| BtsCI | GGATG | 5 cut(s) | 188, 460, 1183, 1488, 1930 |
| BtsIMutI | CAGTG | 2 cut(s) | 1138, 1812 |
| BtuMI | TCGCGA | 1 cut(s) | 382 |
| BveI | ACCTGC | 1 cut(s) | 225 |
| Cac8I | GCNNGC | 4 cut(s) | 302, 532, 946, 1837 |
| CaiI | CAGNNNCTG | 2 cut(s) | 868, 1970 |
| CfoI | GCGC | 3 cut(s) | 100, 263, 1611 |
| Cfr13I | GGNCC | 4 cut(s) | 512, 775, 1025, 1807 |
| ClaI | ATCGAT | 2 cut(s) | 1281, 1397 |
| CseI | GACGC | 1 cut(s) | 174 |
| Csp6I | GTAC | 5 cut(s) | 127, 316, 415, 828, 1958 |
| CviAII | CATG | 6 cut(s) | 268, 1172, 1204, 1295, 1768, 2022 |
| CviQI | GTAC | 5 cut(s) | 127, 316, 415, 828, 1958 |
| DdeI | CTNAG | 4 cut(s) | 56, 488, 882, 1253 |
| DpnI | GATC | 7 cut(s) | 813, 984, 1179, 1280, 1623, 1947, 2010 |
| DpnII | GATC | 7 cut(s) | 811, 982, 1177, 1278, 1621, 1945, 2008 |
| DraI | TTTAAA | 1 cut(s) | 1666 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 443 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 443 |
| EaeI | YGGCCR | 1 cut(s) | 532 |
| Eam1104I | CTCTTC | 1 cut(s) | 642 |
| EarI | CTCTTC | 1 cut(s) | 642 |
| Ecl136II | GAGCTC | 2 cut(s) | 68, 1835 |
| Eco130I | CCWWGG | 2 cut(s) | 267, 1171 |
| Eco24I | GRGCYC | 2 cut(s) | 70, 1837 |
| Eco31I | GGTCTC | 1 cut(s) | 148 |
| Eco47I | GGWCC | 3 cut(s) | 775, 1025, 1807 |
| Eco53kI | GAGCTC | 2 cut(s) | 68, 1835 |
| Eco57I | CTGAAG | 1 cut(s) | 1947 |
| Eco72I | CACGTG | 1 cut(s) | 1031 |
| Eco88I | CYCGRG | 3 cut(s) | 61, 1002, 1983 |
| EcoICRI | GAGCTC | 2 cut(s) | 68, 1835 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1652 |
| EcoO109I | RGGNCCY | 1 cut(s) | 512 |
| EcoRI | GAATTC | 1 cut(s) | 1860 |
| EcoRII | CCWGG | 3 cut(s) | 534, 1186, 1357 |
| EcoT14I | CCWWGG | 2 cut(s) | 267, 1171 |
| EcoT38I | GRGCYC | 2 cut(s) | 70, 1837 |
| ErhI | CCWWGG | 2 cut(s) | 267, 1171 |
| Esp3I | CGTCTC | 1 cut(s) | 699 |
| FaeI | CATG | 6 cut(s) | 271, 1175, 1207, 1298, 1771, 2025 |
| FaqI | GGGAC | 1 cut(s) | 1375 |
| FatI | CATG | 6 cut(s) | 267, 1171, 1203, 1294, 1767, 2021 |
| FauI | CCCGC | 1 cut(s) | 953 |
| FauNDI | CATATG | 1 cut(s) | 1597 |
| FblI | GTMKAC | 2 cut(s) | 859, 1476 |
| FokI | GGATG | 5 cut(s) | 175, 467, 1170, 1475, 1937 |
| FriOI | GRGCYC | 2 cut(s) | 70, 1837 |
| FspBI | CTAG | 5 cut(s) | 258, 668, 1037, 1154, 1694 |
| GlaI | GCGC | 3 cut(s) | 99, 262, 1610 |
| GsaI | CCCAGC | 1 cut(s) | 1634 |
| GsuI | CTGGAG | 1 cut(s) | 774 |
| HaeII | RGCGCY | 2 cut(s) | 264, 1612 |
| HaeIII | GGCC | 3 cut(s) | 514, 534, 784 |
| HapII | CCGG | 3 cut(s) | 785, 808, 1455 |
| HgaI | GACGC | 1 cut(s) | 174 |
| HhaI | GCGC | 3 cut(s) | 100, 263, 1611 |
| Hin1II | CATG | 6 cut(s) | 271, 1175, 1207, 1298, 1771, 2025 |
| Hin6I | GCGC | 3 cut(s) | 98, 261, 1609 |
| HinP1I | GCGC | 3 cut(s) | 98, 261, 1609 |
| HincII | GTYRAC | 1 cut(s) | 662 |
| HindII | GTYRAC | 1 cut(s) | 662 |
| HindIII | AAGCTT | 2 cut(s) | 911, 1901 |
| HinfI | GANTC | 7 cut(s) | 350, 749, 1128, 1394, 1534, 1895, 2030 |
| HpaII | CCGG | 3 cut(s) | 785, 808, 1455 |
| HphI | GGTGA | 3 cut(s) | 239, 917, 992 |
| Hpy188I | TCNGA | 9 cut(s) | 114, 170, 449, 566, 699, 1432, 1446, 1950, 2013 |
| Hpy99I | CGWCG | 2 cut(s) | 449, 1856 |
| HpyAV | CCTTC | 7 cut(s) | 444, 525, 621, 625, 643, 1850, 1971 |
| HpyCH4III | ACNGT | 6 cut(s) | 159, 588, 991, 1123, 1428, 1999 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 21, 191, 219, 231, 1150, 1757 |
| HpyF3I | CTNAG | 4 cut(s) | 56, 488, 882, 1253 |
| Hsp92II | CATG | 6 cut(s) | 271, 1175, 1207, 1298, 1771, 2025 |
| HspAI | GCGC | 3 cut(s) | 98, 261, 1609 |
| Kzo9I | GATC | 7 cut(s) | 811, 982, 1177, 1278, 1621, 1945, 2008 |
| LmnI | GCTCC | 9 cut(s) | 40, 115, 210, 219, 241, 271, 922, 1360, 1832 |
| Lsp1109I | GCAGC | 7 cut(s) | 286, 496, 697, 719, 1123, 1573, 1752 |
| LweI | GCATC | 5 cut(s) | 861, 1081, 1273, 1554, 2004 |
| MaeI | CTAG | 5 cut(s) | 258, 668, 1037, 1154, 1694 |
| MaeIII | GTNAC | 4 cut(s) | 741, 746, 1450, 1726 |
| MalI | GATC | 7 cut(s) | 813, 984, 1179, 1280, 1623, 1947, 2010 |
| MbiI | CCGCTC | 1 cut(s) | 222 |
| MboI | GATC | 7 cut(s) | 811, 982, 1177, 1278, 1621, 1945, 2008 |
| MboII | GAAGA | 6 cut(s) | 470, 581, 587, 659, 968, 1904 |
| MfeI | CAATTG | 2 cut(s) | 363, 1148 |
| MflI | RGATCY | 4 cut(s) | 811, 1177, 1621, 2008 |
| MhlI | GDGCHC | 4 cut(s) | 70, 481, 1070, 1837 |
| MlsI | TGGCCA | 1 cut(s) | 534 |
| MluNI | TGGCCA | 1 cut(s) | 534 |
| MlyI | GAGTC | 4 cut(s) | 743, 1137, 1528, 2039 |
| MmeI | TCCRAC | 7 cut(s) | 137, 219, 327, 427, 1105, 1396, 2018 |
| Mox20I | TGGCCA | 1 cut(s) | 534 |
| MroXI | GAANNNNTTC | 2 cut(s) | 465, 1860 |
| MscI | TGGCCA | 1 cut(s) | 534 |
| MseI | TTAA | 9 cut(s) | 92, 123, 771, 993, 1086, 1118, 1437, 1464, 1665 |
| Msp20I | TGGCCA | 1 cut(s) | 534 |
| MspA1I | CMGCKG | 1 cut(s) | 710 |
| MspI | CCGG | 3 cut(s) | 785, 808, 1455 |
| MspR9I | CCNGG | 5 cut(s) | 536, 809, 1188, 1359, 1456 |
| MunI | CAATTG | 2 cut(s) | 363, 1148 |
| Mva1269I | GAATGC | 2 cut(s) | 591, 1751 |
| MvaI | CCWGG | 3 cut(s) | 536, 1188, 1359 |
| MvnI | CGCG | 1 cut(s) | 382 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 21, 191, 219, 231, 1150, 1757 |
| NciI | CCSGG | 2 cut(s) | 809, 1456 |
| NcoI | CCATGG | 2 cut(s) | 267, 1171 |
| NdeI | CATATG | 1 cut(s) | 1597 |
| NdeII | GATC | 7 cut(s) | 811, 982, 1177, 1278, 1621, 1945, 2008 |
| NlaIII | CATG | 6 cut(s) | 271, 1175, 1207, 1298, 1771, 2025 |
| NlaIV | GGNNCC | 4 cut(s) | 243, 513, 1356, 1623 |
| NmeAIII | GCCGAG | 1 cut(s) | 460 |
| NmuCI | GTSAC | 2 cut(s) | 746, 1726 |
| NruI | TCGCGA | 1 cut(s) | 382 |
| NspI | RCATGY | 1 cut(s) | 1771 |
| NspV | TTCGAA | 3 cut(s) | 136, 176, 285 |
| PaeR7I | CTCGAG | 2 cut(s) | 61, 1983 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 182, 291, 698 |
| PctI | GAATGC | 2 cut(s) | 591, 1751 |
| PdmI | GAANNNNTTC | 2 cut(s) | 465, 1860 |
| PfeI | GAWTC | 3 cut(s) | 350, 1394, 1895 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1187 |
| PfoI | TCCNGGA | 1 cut(s) | 1186 |
| PleI | GAGTC | 4 cut(s) | 743, 1136, 1528, 2038 |
| PmaCI | CACGTG | 1 cut(s) | 1031 |
| PmlI | CACGTG | 1 cut(s) | 1031 |
| PpsI | GAGTC | 4 cut(s) | 743, 1136, 1528, 2038 |
| Ppu21I | YACGTR | 4 cut(s) | 746, 1031, 1228, 1640 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1367 |
| Psp124BI | GAGCTC | 2 cut(s) | 70, 1837 |
| Psp1406I | AACGTT | 1 cut(s) | 180 |
| Psp6I | CCWGG | 3 cut(s) | 534, 1186, 1357 |
| PspCI | CACGTG | 1 cut(s) | 1031 |
| PspFI | CCCAGC | 1 cut(s) | 1630 |
| PspGI | CCWGG | 3 cut(s) | 534, 1186, 1357 |
| PspN4I | GGNNCC | 4 cut(s) | 243, 513, 1356, 1623 |
| PspPI | GGNCC | 4 cut(s) | 512, 775, 1025, 1807 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1635, 1667 |
| PstNI | CAGNNNCTG | 2 cut(s) | 868, 1970 |
| PsuI | RGATCY | 4 cut(s) | 811, 1177, 1621, 2008 |
| PvuII | CAGCTG | 1 cut(s) | 710 |
| RruI | TCGCGA | 1 cut(s) | 382 |
| RsaI | GTAC | 5 cut(s) | 128, 317, 416, 829, 1959 |
| RsaNI | GTAC | 5 cut(s) | 127, 316, 415, 828, 1958 |
| SacI | GAGCTC | 2 cut(s) | 70, 1837 |
| SaqAI | TTAA | 9 cut(s) | 92, 123, 771, 993, 1086, 1118, 1437, 1464, 1665 |
| Sau3AI | GATC | 7 cut(s) | 811, 982, 1177, 1278, 1621, 1945, 2008 |
| Sau96I | GGNCC | 4 cut(s) | 512, 775, 1025, 1807 |
| SchI | GAGTC | 4 cut(s) | 743, 1137, 1528, 2039 |
| ScrFI | CCNGG | 5 cut(s) | 536, 809, 1188, 1359, 1456 |
| SduI | GDGCHC | 4 cut(s) | 70, 481, 1070, 1837 |
| SfaNI | GCATC | 5 cut(s) | 861, 1081, 1273, 1554, 2004 |
| SfcI | CTRYAG | 1 cut(s) | 860 |
| Sfr274I | CTCGAG | 2 cut(s) | 61, 1983 |
| SfuI | TTCGAA | 3 cut(s) | 136, 176, 285 |
| SinI | GGWCC | 3 cut(s) | 775, 1025, 1807 |
| SlaI | CTCGAG | 2 cut(s) | 61, 1983 |
| SmlI | CTYRAG | 4 cut(s) | 61, 1536, 1580, 1983 |
| SmoI | CTYRAG | 4 cut(s) | 61, 1536, 1580, 1983 |
| SsiI | CCGC | 9 cut(s) | 192, 205, 222, 225, 264, 310, 946, 1144, 1690 |
| SspI | AATATT | 1 cut(s) | 1195 |
| SspMI | CTAG | 5 cut(s) | 258, 668, 1037, 1154, 1694 |
| SstI | GAGCTC | 2 cut(s) | 70, 1837 |
| StyD4I | CCNGG | 5 cut(s) | 534, 807, 1186, 1357, 1454 |
| StyI | CCWWGG | 2 cut(s) | 267, 1171 |
| TaaI | ACNGT | 6 cut(s) | 159, 588, 991, 1123, 1428, 1999 |
| TatI | WGTACW | 3 cut(s) | 126, 315, 414 |
| TauI | GCSGC | 4 cut(s) | 225, 266, 1147, 1693 |
| TfiI | GAWTC | 3 cut(s) | 350, 1394, 1895 |
| Tru1I | TTAA | 9 cut(s) | 92, 123, 771, 993, 1086, 1118, 1437, 1464, 1665 |
| Tru9I | TTAA | 9 cut(s) | 92, 123, 771, 993, 1086, 1118, 1437, 1464, 1665 |
| TscAI | CASTG | 2 cut(s) | 1138, 1819 |
| TseFI | GTSAC | 2 cut(s) | 746, 1726 |
| TseI | GCWGC | 7 cut(s) | 274, 484, 707, 710, 1136, 1561, 1740 |
| Tsp45I | GTSAC | 2 cut(s) | 746, 1726 |
| TspDTI | ATGAA | 8 cut(s) | 471, 511, 593, 597, 828, 912, 1834, 2010 |
| TspGWI | ACGGA | 5 cut(s) | 157, 815, 1481, 1511, 1634 |
| TspRI | CASTG | 2 cut(s) | 1138, 1819 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1187 |
| VneI | GTGCAC | 1 cut(s) | 1066 |
| VpaK11BI | GGWCC | 3 cut(s) | 775, 1025, 1807 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1652 |
| XapI | RAATTY | 7 cut(s) | 687, 899, 996, 1157, 1272, 1574, 1860 |
| XceI | RCATGY | 1 cut(s) | 1771 |
| XhoI | CTCGAG | 2 cut(s) | 61, 1983 |
| XmiI | GTMKAC | 2 cut(s) | 859, 1476 |
| XmnI | GAANNNNTTC | 2 cut(s) | 465, 1860 |
| XspI | CTAG | 5 cut(s) | 258, 668, 1037, 1154, 1694 |