Rh6DG447400

aarF domain-containing protein kinase At4g31390

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0001871
Physical Location & Seq
Forward (+)
62054710 .. 62066339
11630 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG447400.1

Sequence Viewer

Length: 2499 bp
ATGCGTGATGGACGTATTGGATATGTGGACTTTGGGAATGTTGCTGTGCTTAGTCAGCAAAACAAACAGATTTTGATCGATGCTGTCGTCCATGCTGTAAATGAGGACTATGTTGAGATGGCAAATGATTTCACCAGACTGGGCTTCTTGGCTCCTGGGACTGATGTCTCTCCTATTGTTCCAGCTTTAGAAGCAATCTGGCAGAATTCTCTTGGAAAAGGACTGTCTGACTTTAATTTTCGAAGTGTTACTGGGAAGTTTAATGAATTAGTTTACAACTATCCCATTCGTATTCCAGAGAGGTTTTCGCTTGTTATCAGATCTTTATTGACTCAAGAGGGTATCTGTTTTACTTTGCAGCCAGATTTCAAATTTCTTGAGGTTGCATATCCATATGTGGCAAAACGCCTCCTAACAGATCCAAACCCGGCTCTGCGTGAACGCCTCATACAAGTACTATTTAAGGATGGTGTTTTCCAATGGAAGCGGCTAGAAAATCTCATTGTTCTTGCAAAAGAAAATGTGTCCATGATGAGCAGCAATCCTGCATTGCAAGCGAAAGAATTGCAAGGGTTAAGAGAGTTGCAAGTTAGCAAGAAACTGGACCTCACTGACACCATCAAAGATGGAGCTCGCCTTTTCATTTTTGACGAAGGAATCCGTAGAAAGCTCATTCTTGCTTTGACCGAAGATTCAAAGCTTCACATAGAAGAGCTCGTGGATGTGTATAGACTGGTTGAAGATCAGATAGACATACCAACGGTTGCTGTGGAAGTAGCACGAGGCAAAGAACCTGAGTTAAAGCAGGAAACTGTAAGGCGTGATGTTTGGCGTTGTTCCATTTGTACATATGATAATGAAGAAGGTTTGACTGCGTGTGACATTTGTGGGGTTCTTCGTAAACCTTTGGGTAGAGTTGGAAGCAATATTGATAAGAAAACAGTTGAAGGCAGATGCAAAGATTCTGGAGCATCCGTAATGGCCAAGTGTCTTTTTGCATCGTTGCCGCGCAAGATAACCCAAAAGGCTGTATTATTTCATCAGCAGAAAGATGATTTTCTGATAGAAGAGGGAAATAAGTTCTACAAGCTTGGGGATATCCAAGGACCCATTCATGAATTCCAAAATGCTTTTATTATTCATAAGAATGATGATATTAATATAGCTCCTTTCAAGTTTGATGTTCCATCCCCAGATGATGTGGTTTCCAATGGATTGCGATCCTCCAAAGTGGGTTCAAAAGCCAGTGTTAGTGACGTAGAGTCTTCGGGAGTTTCCTCGAAAGCTGCTAAGAAGAATAGTGCAGTTAGGGCACAATCAAGTGCTGAATGGTCAGATAGCTCATCTACTGCAGCACAAAAAGACCAACAAGCTAGATTAGATAAGGGAATTTCATCAGGGAATAGGGCCTTTGGCCATCCCCATGGAAGTAGTGGCACCACAACTATACAATCAAATGGTAGTTTGTCGGACAGTTCATCCTTGCAGCCAACAAGCTCTCATATGGAAGAGGGCATTAGTTCTTTAGTGATTGGAGGCAAGCCTGAGAGTCTTACTACTAGCTCTAAGAACATGTCTTCCGATGCTAGATCTGGGCATTCGAAAATTGTTAGTTCTAGCGGATCGCATTCACGAGCAGACTATAAACCTGAAAAATGGATGCTTCCTGACAAAGCTGTTGATACATTGACTCAACTGAATCTTGCAATTGTTGGACATGTTGATTCAGGAAAATCAACACTCTCAGGTAGACTGCTTCACCTTTTGGGACGGGTATCTAAAAAAGACATGCACAAATATGAGAAAGAGGCAAAGTCACAGGGCAAGGGGTCATTTGCATATGCTTGGGCATTGGATGAGAGTGCAGAAGAAAGGGAAAGAGGAATAACTATGAATGTGGCTGTTGCATATTTTGATTCCAGAAAGTATCATGTTGTTGTGCTGGATTCTCCTGGCCATAAAGACTTTGTTCCAAACATGATATCTGGGGCAACACAAGCTGATGCTGCAATACTTCTTGTAGATGCTTCGTGTGGTGCATTCGAAGCTGGTATAAAGGGACAGACTATGGAACACGCACAACTTATCAGAAGCTTTGGTGTTGATCAAATTATAGTTGCGGTTAACAAGATGGATGTTGTTGAATACTCCAAGGATCGATTTGATGAAATCAAACAGACACTTGGAACATTTCTCCATTCCCGTGGCTTCAAAGATTCTTCAGTGTATTGGGTTCCATTGAGTGTCATGGAAAATCAAAATTTGGTATCAGCTCCTTCTGAGGCTCGTTTGTTGTCTTGGTATCGTGGACCTTCCCTGTTGGATTCAATTGATTCCCTTCAACCTCCCACGAGAGATTTTCAAAGGCCACTGCTCATGCCAATATGTGATGTCATTAGATCTACTTCTCTGGGACAGGTGTCTGCTTGTGGTAAATTGGAAGCAGGAGCTCTTCGGAGTGGATCAAAGGTATGTACCATATATTTGAGAGAGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006464 GO:0006468 GO:0006725 GO:0006778 GO:0006787 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006979 GO:0006995 GO:0006996 GO:0007154 GO:0008150 GO:0008152 GO:0009056 GO:0009267 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009628 GO:0009635 GO:0009636 GO:0009637 GO:0009639 GO:0009657 GO:0009658 GO:0009668 GO:0009767 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0009987 GO:0009991 GO:0010027 GO:0010033 GO:0010035 GO:0010109 GO:0010114 GO:0010287 GO:0010380 GO:0015979 GO:0015994 GO:0015996 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019216 GO:0019222 GO:0019439 GO:0019538 GO:0019684 GO:0019747 GO:0022900 GO:0031279 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031537 GO:0031540 GO:0031667 GO:0031668 GO:0031669 GO:0033013 GO:0033015 GO:0033554 GO:0034641 GO:0036211 GO:0042221 GO:0042440 GO:0042594 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043562 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044270 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045828 GO:0045834 GO:0046149 GO:0046483 GO:0046700 GO:0046889 GO:0046890 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051186 GO:0051187 GO:0051193 GO:0051194 GO:0051716 GO:0055114 GO:0061024 GO:0065007 GO:0065009 GO:0071496 GO:0071704 GO:0071840 GO:0080090 GO:0080177 GO:0080183 GO:0090056 GO:0140096 GO:1901360 GO:1901361 GO:1901401 GO:1901403 GO:1901463 GO:1901465 GO:1901562 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1902171 GO:1902326 GO:1904143
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC1

Protein Analysis

832

Amino Acids

91.7

Weight (kDa)

7.0

Isoelectric Point (pI)

42.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GTP_EFTU PF00009 566 - 780 4.5e-48 Elongation factor Tu GTP binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1436
AccI GTMKAC 1 cut(s) 1750
AccII CGCG 1 cut(s) 1009
AciI CCGC 4 cut(s) 487, 1007, 1620, 2120
AclWI GGATC 5 cut(s) 413, 1215, 1630, 2163, 2470
AcoI YGGCCR 3 cut(s) 981, 1414, 1954
AcsI RAATTY 5 cut(s) 205, 371, 1118, 1389, 2260
AcuI CTGAAG 1 cut(s) 2205
AfaI GTAC 3 cut(s) 456, 847, 2476
AflIII ACRYGT 2 cut(s) 1572, 1717
AhdI GACNNNNNGTC 1 cut(s) 1261
AjnI CCWGG 2 cut(s) 154, 1951
AjuI GAANNNNNNNTTGG 2 cut(s) 1095, 1127
AloI GAACNNNNNNTCC 2 cut(s) 1562, 1594
Alw21I GWGCWC 3 cut(s) 634, 717, 2452
Alw26I GTCTC 1 cut(s) 172
AlwI GGATC 5 cut(s) 413, 1215, 1630, 2163, 2470
AoxI GGCC 5 cut(s) 981, 1407, 1414, 1954, 2366
ApeKI GCWGC 6 cut(s) 358, 537, 1286, 1352, 1486, 2006
ApoI RAATTY 5 cut(s) 205, 371, 1118, 1389, 2260
AseI ATTAAT 1 cut(s) 1158
AspLEI GCGC 1 cut(s) 1011
AspS9I GGNCC 4 cut(s) 604, 1106, 1407, 2309
AsuC2I CCSGG 1 cut(s) 428
AsuHPI GGTGA 2 cut(s) 124, 1751
AsuII TTCGAA 3 cut(s) 241, 1601, 2043
AvaII GGWCC 3 cut(s) 604, 1106, 2309
BaeGI GKGCMC 1 cut(s) 1315
BalI TGGCCA 3 cut(s) 983, 1416, 1956
BanI GGYRCC 1 cut(s) 1436
BanII GRGCYC 3 cut(s) 634, 717, 2452
BauI CACGAG 4 cut(s) 716, 780, 1632, 2350
BbsI GAAGAC 2 cut(s) 1257, 1569
Bbv12I GWGCWC 3 cut(s) 634, 717, 2452
BbvI GCAGC 6 cut(s) 370, 549, 1273, 1364, 1498, 1993
BccI CCATC 8 cut(s) 2, 112, 461, 620, 626, 1195, 1425, 2125
BcgI CGANNNNNNTGC 2 cut(s) 547, 581
BciT130I CCWGG 2 cut(s) 156, 1953
BclI TGATCA 1 cut(s) 2104
BcnI CCSGG 1 cut(s) 428
BcoDI GTCTC 1 cut(s) 172
BfaI CTAG 5 cut(s) 491, 1374, 1560, 1587, 1617
BfmI CTRYAG 1 cut(s) 1350
BglII AGATCT 3 cut(s) 320, 1589, 2399
BisI GCNGC 8 cut(s) 359, 488, 538, 1007, 1287, 1353, 1487, 2007
BlsI GCNGC 8 cut(s) 360, 489, 539, 1008, 1288, 1354, 1488, 2008
BmcAI AGTACT 1 cut(s) 456
Bme1390I CCNGG 3 cut(s) 156, 428, 1953
Bme18I GGWCC 3 cut(s) 604, 1106, 2309
BmeRI GACNNNNNGTC 1 cut(s) 1261
BmgT120I GGNCC 4 cut(s) 604, 1106, 1407, 2309
BmiI GGNNCC 4 cut(s) 153, 1108, 1438, 2235
BmrFI CCNGG 3 cut(s) 156, 428, 1953
BmrI ACTGGG 2 cut(s) 149, 261
BmsI GCATC 8 cut(s) 70, 944, 980, 1007, 1573, 1650, 1993, 2014
BmuI ACTGGG 2 cut(s) 149, 261
BoxI GACNNNNGTC 2 cut(s) 164, 2419
BpiI GAAGAC 2 cut(s) 1257, 1569
BpmI CTGGAG 1 cut(s) 987
Bpu14I TTCGAA 3 cut(s) 241, 1601, 2043
BpuEI CTTGAG 2 cut(s) 318, 398
BpuMI CCSGG 1 cut(s) 428
Bsa29I ATCGAT 2 cut(s) 78, 2158
BsaBI GATNNNNATC 2 cut(s) 74, 1219
BsaJI CCNNGG 5 cut(s) 155, 1102, 1423, 2151, 2203
BsaXI ACNNNNNCTCC 2 cut(s) 960, 990
Bse1I ACTGG 5 cut(s) 144, 256, 606, 738, 1245
Bse3DI GCAATG 1 cut(s) 548
Bse8I GATNNNNATC 2 cut(s) 74, 1219
BseBI CCWGG 2 cut(s) 156, 1953
BseCI ATCGAT 2 cut(s) 78, 2158
BseDI CCNNGG 5 cut(s) 155, 1102, 1423, 2151, 2203
BseGI GGATG 9 cut(s) 472, 727, 971, 1187, 1417, 1478, 1665, 1861, 2140
BseJI GATNNNNATC 2 cut(s) 74, 1219
BseMI GCAATG 1 cut(s) 548
BseMII CTCAG 4 cut(s) 786, 1536, 1758, 2271
BseNI ACTGG 5 cut(s) 144, 256, 606, 738, 1245
BseSI GKGCMC 1 cut(s) 1315
BseXI GCAGC 6 cut(s) 370, 549, 1273, 1364, 1498, 1993
BsgI GTGCAG 2 cut(s) 1323, 1884
Bsh1236I CGCG 1 cut(s) 1009
BshFI GGCC 5 cut(s) 983, 1409, 1416, 1956, 2368
BshNI GGYRCC 1 cut(s) 1436
BshVI ATCGAT 2 cut(s) 78, 2158
BsiHKAI GWGCWC 3 cut(s) 634, 717, 2452
BsiSI CCGG 1 cut(s) 428
BslFI GGGAC 4 cut(s) 172, 1782, 2073, 2427
BsmAI GTCTC 1 cut(s) 172
BsmFI GGGAC 4 cut(s) 172, 1782, 2073, 2427
BsmI GAATGC 3 cut(s) 1597, 1627, 2039
BsnI GGCC 5 cut(s) 983, 1409, 1416, 1956, 2368
Bsp119I TTCGAA 3 cut(s) 241, 1601, 2043
Bsp1286I GDGCHC 4 cut(s) 634, 717, 1315, 2452
Bsp1407I TGTACA 1 cut(s) 845
Bsp19I CCATGG 1 cut(s) 1423
BspACI CCGC 4 cut(s) 487, 1007, 1620, 2120
BspANI GGCC 5 cut(s) 983, 1409, 1416, 1956, 2368
BspCNI CTCAG 4 cut(s) 787, 1537, 1757, 2272
BspDI ATCGAT 2 cut(s) 78, 2158
BspFNI CGCG 1 cut(s) 1009
BspHI TCATGA 1 cut(s) 1114
BspLI GGNNCC 4 cut(s) 153, 1108, 1438, 2235
BspMAI CTGCAG 1 cut(s) 1354
BspPI GGATC 5 cut(s) 413, 1215, 1630, 2163, 2470
BspQI GCTCTTC 2 cut(s) 705, 2457
BspT104I TTCGAA 3 cut(s) 241, 1601, 2043
BspT107I GGYRCC 1 cut(s) 1436
BsrDI GCAATG 1 cut(s) 548
BsrGI TGTACA 1 cut(s) 845
BsrI ACTGG 5 cut(s) 144, 256, 606, 738, 1245
BssECI CCNNGG 5 cut(s) 155, 1102, 1423, 2151, 2203
BssSI CACGAG 4 cut(s) 716, 780, 1632, 2350
BssT1I CCWWGG 3 cut(s) 1102, 1423, 2151
Bst2BI CACGAG 4 cut(s) 716, 780, 1632, 2350
Bst2UI CCWGG 2 cut(s) 156, 1953
Bst4CI ACNGT 5 cut(s) 225, 763, 814, 943, 1475
Bst6I CTCTTC 4 cut(s) 705, 1062, 1503, 2457
BstAUI TGTACA 1 cut(s) 845
BstBI TTCGAA 3 cut(s) 241, 1601, 2043
BstC8I GCNNGC 3 cut(s) 555, 634, 1541
BstDEI CTNAG 7 cut(s) 50, 795, 1290, 1545, 1566, 1744, 2280
BstDSI CCRYGG 2 cut(s) 1423, 2203
BstF5I GGATG 9 cut(s) 472, 727, 971, 1187, 1417, 1478, 1665, 1861, 2140
BstFNI CGCG 1 cut(s) 1009
BstHHI GCGC 1 cut(s) 1011
BstMAI GTCTC 1 cut(s) 172
BstMWI GCNNNNNNNGC 7 cut(s) 55, 191, 554, 1310, 1997, 2006, 2045
BstNI CCWGG 2 cut(s) 156, 1953
BstNSI RCATGY 3 cut(s) 1576, 1721, 1792
BstPAI GACNNNNGTC 2 cut(s) 164, 2419
BstSCI CCNGG 3 cut(s) 154, 426, 1951
BstSFI CTRYAG 1 cut(s) 1350
BstSLI GKGCMC 1 cut(s) 1315
BstUI CGCG 1 cut(s) 1009
BstV1I GCAGC 6 cut(s) 370, 549, 1273, 1364, 1498, 1993
BstV2I GAAGAC 2 cut(s) 1257, 1569
BstX2I RGATCY 4 cut(s) 320, 418, 1589, 2399
BstXI CCANNNNNNTGG 2 cut(s) 1424, 2204
BstYI RGATCY 4 cut(s) 320, 418, 1589, 2399
Bsu15I ATCGAT 2 cut(s) 78, 2158
BsuRI GGCC 5 cut(s) 983, 1409, 1416, 1956, 2368
BsuTUI ATCGAT 2 cut(s) 78, 2158
BtgI CCRYGG 2 cut(s) 1423, 2203
BtsCI GGATG 9 cut(s) 472, 727, 971, 1187, 1417, 1478, 1665, 1861, 2140
BtsI GCAGTG 1 cut(s) 2369
BtsIMutI CAGTG 4 cut(s) 609, 1252, 2229, 2369
Cac8I GCNNGC 3 cut(s) 555, 634, 1541
CciI TCATGA 1 cut(s) 1114
CfoI GCGC 1 cut(s) 1011
Cfr13I GGNCC 4 cut(s) 604, 1106, 1407, 2309
ClaI ATCGAT 2 cut(s) 78, 2158
Csp6I GTAC 3 cut(s) 455, 846, 2475
CviQI GTAC 3 cut(s) 455, 846, 2475
DdeI CTNAG 7 cut(s) 50, 795, 1290, 1545, 1566, 1744, 2280
DriI GACNNNNNGTC 1 cut(s) 1261
EaeI YGGCCR 3 cut(s) 981, 1414, 1954
Eam1104I CTCTTC 4 cut(s) 705, 1062, 1503, 2457
Eam1105I GACNNNNNGTC 1 cut(s) 1261
EarI CTCTTC 4 cut(s) 705, 1062, 1503, 2457
Ecl136II GAGCTC 3 cut(s) 632, 715, 2450
Eco130I CCWWGG 3 cut(s) 1102, 1423, 2151
Eco24I GRGCYC 3 cut(s) 634, 717, 2452
Eco32I GATATC 2 cut(s) 1099, 1983
Eco47I GGWCC 3 cut(s) 604, 1106, 2309
Eco53kI GAGCTC 3 cut(s) 632, 715, 2450
Eco57I CTGAAG 1 cut(s) 2205
EcoICRI GAGCTC 3 cut(s) 632, 715, 2450
EcoO109I RGGNCCY 2 cut(s) 1106, 1407
EcoRI GAATTC 2 cut(s) 205, 1118
EcoRII CCWGG 2 cut(s) 154, 1951
EcoRV GATATC 2 cut(s) 1099, 1983
EcoT14I CCWWGG 3 cut(s) 1102, 1423, 2151
EcoT38I GRGCYC 3 cut(s) 634, 717, 2452
ErhI CCWWGG 3 cut(s) 1102, 1423, 2151
FaqI GGGAC 4 cut(s) 172, 1782, 2073, 2427
FauNDI CATATG 4 cut(s) 394, 850, 1503, 1840
FbaI TGATCA 1 cut(s) 2104
FblI GTMKAC 1 cut(s) 1750
Fnu4HI GCNGC 8 cut(s) 359, 488, 538, 1007, 1287, 1353, 1487, 2007
FokI GGATG 9 cut(s) 479, 734, 958, 1174, 1404, 1465, 1672, 1868, 2147
FriOI GRGCYC 3 cut(s) 634, 717, 2452
Fsp4HI GCNGC 8 cut(s) 359, 488, 538, 1007, 1287, 1353, 1487, 2007
FspBI CTAG 5 cut(s) 491, 1374, 1560, 1587, 1617
GlaI GCGC 1 cut(s) 1010
GluI GCNGC 8 cut(s) 359, 488, 538, 1007, 1287, 1353, 1487, 2007
GsuI CTGGAG 1 cut(s) 987
HaeIII GGCC 5 cut(s) 983, 1409, 1416, 1956, 2368
HapII CCGG 1 cut(s) 428
HhaI GCGC 1 cut(s) 1011
Hin6I GCGC 1 cut(s) 1009
HinP1I GCGC 1 cut(s) 1009
HincII GTYRAC 1 cut(s) 2125
HindII GTYRAC 1 cut(s) 2125
HindIII AAGCTT 3 cut(s) 698, 1088, 2092
HpaI GTTAAC 1 cut(s) 2125
HpaII CCGG 1 cut(s) 428
HphI GGTGA 2 cut(s) 124, 1751
Hpy166II GTNNAC 7 cut(s) 28, 274, 440, 902, 1751, 2125, 2309
Hpy8I GTNNAC 7 cut(s) 28, 274, 440, 902, 1751, 2125, 2309
HpyAV CCTTC 6 cut(s) 647, 857, 941, 2286, 2322, 2348
HpyCH4III ACNGT 5 cut(s) 225, 763, 814, 943, 1475
HpyCH4IV ACGT 2 cut(s) 13, 1257
HpyF10VI GCNNNNNNNGC 7 cut(s) 55, 191, 554, 1310, 1997, 2006, 2045
HpyF3I CTNAG 7 cut(s) 50, 795, 1290, 1545, 1566, 1744, 2280
HpySE526I ACGT 2 cut(s) 13, 1257
HspAI GCGC 1 cut(s) 1009
Ksp22I TGATCA 1 cut(s) 2104
KspAI GTTAAC 1 cut(s) 2125
LguI GCTCTTC 2 cut(s) 705, 2457
LmnI GCTCC 6 cut(s) 157, 629, 968, 1171, 2278, 2447
Lsp1109I GCAGC 6 cut(s) 370, 549, 1273, 1364, 1498, 1993
LweI GCATC 8 cut(s) 70, 944, 980, 1007, 1573, 1650, 1993, 2014
MaeI CTAG 5 cut(s) 491, 1374, 1560, 1587, 1617
MaeII ACGT 2 cut(s) 13, 1257
MaeIII GTNAC 4 cut(s) 247, 878, 1253, 1815
MfeI CAATTG 2 cut(s) 1707, 2328
MflI RGATCY 4 cut(s) 320, 418, 1589, 2399
MhlI GDGCHC 4 cut(s) 634, 717, 1315, 2452
MlsI TGGCCA 3 cut(s) 983, 1416, 1956
MluNI TGGCCA 3 cut(s) 983, 1416, 1956
MlyI GAGTC 4 cut(s) 325, 1271, 1558, 1684
MmeI TCCRAC 4 cut(s) 898, 1449, 1693, 2301
Mox20I TGGCCA 3 cut(s) 983, 1416, 1956
MscI TGGCCA 3 cut(s) 983, 1416, 1956
MseI TTAA 7 cut(s) 234, 261, 462, 575, 800, 1158, 2124
MslI CAYNNNNRTG 4 cut(s) 1146, 1422, 1797, 2202
Msp20I TGGCCA 3 cut(s) 983, 1416, 1956
MspI CCGG 1 cut(s) 428
MspR9I CCNGG 3 cut(s) 156, 428, 1953
MunI CAATTG 2 cut(s) 1707, 2328
Mva1269I GAATGC 3 cut(s) 1597, 1627, 2039
MvaI CCWGG 2 cut(s) 156, 1953
MvnI CGCG 1 cut(s) 1009
MwoI GCNNNNNNNGC 7 cut(s) 55, 191, 554, 1310, 1997, 2006, 2045
NciI CCSGG 1 cut(s) 428
NcoI CCATGG 1 cut(s) 1423
NdeI CATATG 4 cut(s) 394, 850, 1503, 1840
NlaIV GGNNCC 4 cut(s) 153, 1108, 1438, 2235
NmuCI GTSAC 3 cut(s) 878, 1253, 1815
NspI RCATGY 3 cut(s) 1576, 1721, 1792
NspV TTCGAA 3 cut(s) 241, 1601, 2043
PagI TCATGA 1 cut(s) 1114
PciI ACATGT 2 cut(s) 1572, 1717
PciSI GCTCTTC 2 cut(s) 705, 2457
PcsI WCGNNNNNNNCGW 1 cut(s) 84
PctI GAATGC 3 cut(s) 1597, 1627, 2039
PkrI GCNGC 8 cut(s) 360, 489, 539, 1008, 1288, 1354, 1488, 2008
PleI GAGTC 4 cut(s) 325, 1270, 1557, 1684
PpsI GAGTC 4 cut(s) 325, 1270, 1557, 1684
PpuMI RGGWCCY 1 cut(s) 1106
PscI ACATGT 2 cut(s) 1572, 1717
PshAI GACNNNNGTC 2 cut(s) 164, 2419
PshBI ATTAAT 1 cut(s) 1158
Psp124BI GAGCTC 3 cut(s) 634, 717, 2452
Psp5II RGGWCCY 1 cut(s) 1106
Psp6I CCWGG 2 cut(s) 154, 1951
PspGI CCWGG 2 cut(s) 154, 1951
PspN4I GGNNCC 4 cut(s) 153, 1108, 1438, 2235
PspPI GGNCC 4 cut(s) 604, 1106, 1407, 2309
PspPPI RGGWCCY 1 cut(s) 1106
PsrI GAACNNNNNNTAC 2 cut(s) 432, 464
PstI CTGCAG 1 cut(s) 1354
PsuI RGATCY 4 cut(s) 320, 418, 1589, 2399
RsaI GTAC 3 cut(s) 456, 847, 2476
RsaNI GTAC 3 cut(s) 455, 846, 2475
RseI CAYNNNNRTG 4 cut(s) 1146, 1422, 1797, 2202
SacI GAGCTC 3 cut(s) 634, 717, 2452
SapI GCTCTTC 2 cut(s) 705, 2457
SaqAI TTAA 7 cut(s) 234, 261, 462, 575, 800, 1158, 2124
SatI GCNGC 8 cut(s) 359, 488, 538, 1007, 1287, 1353, 1487, 2007
Sau96I GGNCC 4 cut(s) 604, 1106, 1407, 2309
ScaI AGTACT 1 cut(s) 456
SchI GAGTC 4 cut(s) 325, 1271, 1558, 1684
ScrFI CCNGG 3 cut(s) 156, 428, 1953
SduI GDGCHC 4 cut(s) 634, 717, 1315, 2452
SfaNI GCATC 8 cut(s) 70, 944, 980, 1007, 1573, 1650, 1993, 2014
SfcI CTRYAG 1 cut(s) 1350
SfuI TTCGAA 3 cut(s) 241, 1601, 2043
SinI GGWCC 3 cut(s) 604, 1106, 2309
SmiMI CAYNNNNRTG 4 cut(s) 1146, 1422, 1797, 2202
SmlI CTYRAG 2 cut(s) 333, 377
SmoI CTYRAG 2 cut(s) 333, 377
SsiI CCGC 4 cut(s) 487, 1007, 1620, 2120
SspI AATATT 1 cut(s) 928
SspMI CTAG 5 cut(s) 491, 1374, 1560, 1587, 1617
SstI GAGCTC 3 cut(s) 634, 717, 2452
StyD4I CCNGG 3 cut(s) 154, 426, 1951
StyI CCWWGG 3 cut(s) 1102, 1423, 2151
TaaI ACNGT 5 cut(s) 225, 763, 814, 943, 1475
TaiI ACGT 2 cut(s) 16, 1260
TaqI TCGA 6 cut(s) 78, 241, 1280, 1601, 2043, 2158
TaqII GACCGA 1 cut(s) 701
TatI WGTACW 2 cut(s) 454, 845
TauI GCSGC 2 cut(s) 490, 1009
Tru1I TTAA 7 cut(s) 234, 261, 462, 575, 800, 1158, 2124
Tru9I TTAA 7 cut(s) 234, 261, 462, 575, 800, 1158, 2124
TscAI CASTG 4 cut(s) 616, 1252, 2229, 2376
TseFI GTSAC 3 cut(s) 878, 1253, 1815
TseI GCWGC 6 cut(s) 358, 537, 1286, 1352, 1486, 2006
Tsp45I GTSAC 3 cut(s) 878, 1253, 1815
TspGWI ACGGA 2 cut(s) 650, 964
TspRI CASTG 4 cut(s) 616, 1252, 2229, 2376
VpaK11BI GGWCC 3 cut(s) 604, 1106, 2309
VspI ATTAAT 1 cut(s) 1158
XapI RAATTY 5 cut(s) 205, 371, 1118, 1389, 2260
XceI RCATGY 3 cut(s) 1576, 1721, 1792
XcmI CCANNNNNNNNNTGG 1 cut(s) 1430
XmiI GTMKAC 1 cut(s) 1750
XspI CTAG 5 cut(s) 491, 1374, 1560, 1587, 1617
ZrmI AGTACT 1 cut(s) 456
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.