RLG00000010945

aarF domain-containing protein kinase At4g31390

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0001871
Physical Location & Seq
Reverse (-)
5570673 .. 5579309
8637 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010945

Sequence Viewer

Length: 1818 bp
ATGAATTCCGTTTCTGTAAACTGCACGTGCGCAGCTCCGTTTCCCGCCAAGCATCTGAGCTCCGCTGGAGCTTGTAGTGTTGCCGGTCAAATAAATGGACCGTCGGAAGGTTGGAGTTCGTTTGATTACAGGCGAAGAGTCCGGAGAAGCGGGAGGTTCCGGGTTTCGAATGCCGCGACCGGAACGCGGCGGAGCTTGGCGTCTTCGAGCGACGGCGAGATCGGTTTTGGGAAGCTGAGCAAGTCTAGCGCCGCCATGGAGCAGCTCGACTTCGAGCGCGGCGTTTGCGTGCCGTTTCGCAAGTATACTCCCGAGACTGTGAGGAATAAGGTGTTGGAATCCAATGGGGCAGTTGCATCGCTAATTTCGAGAGGTGTGGAGATAGTGTGGACTTTGGGCTTGTATTGGTCTACCTTGATGTATGACTGCTTCGTCGGAAGGGATCAAGAAGTTGTTCCAAAGCGTGCTCGACAGCTTAGAAACCTCCTGTGTGATTTGGGGCCTTCTTTCATCAAAGCTGGCCAGGTTCTTGCAAACAGACCTGATATTATCAGAGAAGATTACATGAATGAACTTTGCATTCTCCAAGATGATGTTCCTCCGTTCCCCAATCAGGTCGCCTTTGACATAATAGAAGAGGAGTTGGGTCAACCCCTTGAAGCTGTATTCAGTAAGATTTCGCCACAGACAATAGCAGCTGCCAGTTTGGGTCAAGTTTACCGAGCTACTTTACGTGACACTGGCGAGGATGTAGCTATTAAGGTTCAAAGGCCAGAGATAGAACCTATCATTTATAGGGATCTTTTTCTGTTCCGTACTCTTGCTTCATTCTTAAATGGAATCAGTCTACAGAAACTTGGGTGCAATGCTGAGCTCATTGTTGATGAATTCGGTGAGAAGCTTTTGGAGGAGCTTGATTACACTTTGGAAGCCCGCAATATTGAAGATTTTCTTGAGAACTTTAAAGATGATCCTACTGTCAAGATACCTGACGTTTACAAACAGCTTTCTGGTCCACGTGTTCTAGTAATGGAGTGGATCGATGGTGTTCGGTGCACTAACCCACAGGCAATTAGAGAAGCCGGTATTGATGTAAATGGGTTCTTAACTGTTGGAGTCAGTGCTGCGTTGCGCCAATTACTGGAATTTGGATTGTTCCATGGAGATCCGCATCCTGGAAATGTTTTTGCTATGCGTGATGGACGTATTGGATATGTGGACTTTGGGAATGTTGCTGTGCTTAGTCAGCAAAACAAACAGATTTTGATCGATGCTGTCGTCCATGCTGTAAATGAGGACTATGTTGAGATGGCAAATGATTTCACCAGACTGGGCTTCTTGGCTCCTGGGACTGATGTCTCTCCTATTGTTCCAGCTTTAGAAGCAATCTGGCAGAATTCTCTTGGAAAAGGACTGTCTGACTTTAATTTTCGAAGTGTTACTGGGAAGTTTAATGAATTAGTTTACAACTATCCCATTCGTATTCCAGAGAGGTTTTCGCTTGTTATCAGATCTTTATTGACTCAAGAGGGTATCTGTTTTACTTTGCAGCCAGACTTCAAATTTCTTGAGGTTGCATATCCATATGTGGCAAAACGCCTCCTAACAGATCCAAACCCAGCTCTGCGTGAACGCCTCATACAAGTACTATTTAAGGATGGTGTTTTCCAATGGAAGCGGCTAGAAAATCTCATTGTTCTTGCAAAAGAAAATGTGTCCATGATGAGCAGCAATCCTGCATTGCAAGCGAAAGAAATGTCTGTATCTTCTAATAACCAATTTTGTTTATTCTTCTGCTTGATAGTTGTAACAGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006464 GO:0006468 GO:0006725 GO:0006778 GO:0006787 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006979 GO:0006995 GO:0006996 GO:0007154 GO:0008150 GO:0008152 GO:0009056 GO:0009267 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009628 GO:0009635 GO:0009636 GO:0009637 GO:0009639 GO:0009657 GO:0009658 GO:0009668 GO:0009767 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0009987 GO:0009991 GO:0010027 GO:0010033 GO:0010035 GO:0010109 GO:0010114 GO:0010287 GO:0010380 GO:0015979 GO:0015994 GO:0015996 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019216 GO:0019222 GO:0019439 GO:0019538 GO:0019684 GO:0019747 GO:0022900 GO:0031279 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031537 GO:0031540 GO:0031667 GO:0031668 GO:0031669 GO:0033013 GO:0033015 GO:0033554 GO:0034641 GO:0036211 GO:0042221 GO:0042440 GO:0042594 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043562 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044270 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045828 GO:0045834 GO:0046149 GO:0046483 GO:0046700 GO:0046889 GO:0046890 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051186 GO:0051187 GO:0051193 GO:0051194 GO:0051716 GO:0055114 GO:0061024 GO:0065007 GO:0065009 GO:0071496 GO:0071704 GO:0071840 GO:0080090 GO:0080177 GO:0080183 GO:0090056 GO:0140096 GO:1901360 GO:1901361 GO:1901401 GO:1901403 GO:1901463 GO:1901465 GO:1901562 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1902171 GO:1902326 GO:1904143
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC1

Protein Analysis

606

Amino Acids

67.46

Weight (kDa)

5.36

Isoelectric Point (pI)

40.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC1 PF03109 195 - 439 6.5e-73 ABC1 atypical kinase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 431
Acc16I TGCGCA 1 cut(s) 31
AccB7I CCANNNNNTGG 1 cut(s) 1141
AccI GTMKAC 3 cut(s) 305, 410, 847
AccII CGCG 3 cut(s) 176, 187, 279
AccIII TCCGGA 1 cut(s) 141
AclWI GGATC 6 cut(s) 450, 807, 965, 1046, 1160, 1604
AcoI YGGCCR 1 cut(s) 520
AcsI RAATTY 5 cut(s) 4, 887, 1145, 1396, 1562
AcvI CACGTG 2 cut(s) 27, 1019
AcyI GRCGYC 1 cut(s) 200
AfaI GTAC 2 cut(s) 817, 1647
AfiI CCNNNNNNNGG 5 cut(s) 107, 186, 613, 1141, 1175
AflIII ACRYGT 1 cut(s) 1018
AgsI TTSAA 4 cut(s) 659, 767, 944, 1561
AjnI CCWGG 3 cut(s) 522, 1174, 1345
AjuI GAANNNNNNNTTGG 4 cut(s) 317, 349, 579, 611
Alw21I GWGCWC 4 cut(s) 62, 469, 876, 1058
Alw26I GTCTC 2 cut(s) 308, 1363
Alw44I GTGCAC 1 cut(s) 1054
AlwI GGATC 6 cut(s) 450, 807, 965, 1046, 1160, 1604
Ama87I CYCGRG 1 cut(s) 311
Aor13HI TCCGGA 1 cut(s) 141
AoxI GGCC 3 cut(s) 500, 520, 770
ApaLI GTGCAC 1 cut(s) 1054
ApeKI GCWGC 7 cut(s) 32, 262, 695, 698, 1124, 1549, 1728
ApoI RAATTY 5 cut(s) 4, 887, 1145, 1396, 1562
ArsI GACNNNNNNTTYG 2 cut(s) 1742, 1774
Asp700I GAANNNNTTC 2 cut(s) 453, 948
AspLEI GCGC 4 cut(s) 32, 251, 279, 1134
AspS9I GGNCC 3 cut(s) 98, 500, 1013
AsuC2I CCSGG 1 cut(s) 161
AsuHPI GGTGA 2 cut(s) 905, 1315
AsuII TTCGAA 2 cut(s) 167, 1432
AvaI CYCGRG 1 cut(s) 311
AvaII GGWCC 2 cut(s) 98, 1013
BaeGI GKGCMC 1 cut(s) 1058
BalI TGGCCA 1 cut(s) 522
BanII GRGCYC 2 cut(s) 62, 876
BarI GAAGNNNNNNTAC 4 cut(s) 413, 445, 808, 840
BbrPI CACGTG 2 cut(s) 27, 1019
BbsI GAAGAC 1 cut(s) 195
Bbv12I GWGCWC 4 cut(s) 62, 469, 876, 1058
BbvI GCAGC 7 cut(s) 44, 274, 685, 707, 1111, 1561, 1740
BccI CCATC 4 cut(s) 1037, 1193, 1303, 1652
BceAI ACGGC 2 cut(s) 229, 277
BcgI CGANNNNNNTGC 2 cut(s) 339, 373
BciT130I CCWGG 3 cut(s) 524, 1176, 1347
BcnI CCSGG 1 cut(s) 161
BcoDI GTCTC 2 cut(s) 308, 1363
BfaI CTAG 3 cut(s) 246, 1025, 1682
BfmI CTRYAG 1 cut(s) 848
BfoI RGCGCY 1 cut(s) 252
BglII AGATCT 1 cut(s) 1511
BlpI GCTNAGC 2 cut(s) 236, 870
BmcAI AGTACT 1 cut(s) 1647
Bme1390I CCNGG 4 cut(s) 161, 524, 1176, 1347
Bme18I GGWCC 2 cut(s) 98, 1013
BmeT110I CYCGRG 1 cut(s) 311
BmgT120I GGNCC 3 cut(s) 98, 500, 1013
BmiI GGNNCC 3 cut(s) 158, 501, 1344
BmrFI CCNGG 4 cut(s) 161, 524, 1176, 1347
BmrI ACTGGG 2 cut(s) 1340, 1452
BmsI GCATC 4 cut(s) 61, 365, 1180, 1261
BmuI ACTGGG 2 cut(s) 1340, 1452
BoxI GACNNNNGTC 1 cut(s) 1355
BpiI GAAGAC 1 cut(s) 195
BpmI CTGGAG 1 cut(s) 87
Bpu1102I GCTNAGC 2 cut(s) 236, 870
Bpu14I TTCGAA 2 cut(s) 167, 1432
BpuEI CTTGAG 3 cut(s) 974, 1509, 1589
BpuMI CCSGG 1 cut(s) 161
Bsa29I ATCGAT 2 cut(s) 1041, 1269
BsaAI YACGTR 3 cut(s) 27, 734, 1019
BsaBI GATNNNNATC 2 cut(s) 1170, 1265
BsaHI GRCGYC 1 cut(s) 200
BsaJI CCNNGG 3 cut(s) 255, 1159, 1346
BsaWI WCCGGW 2 cut(s) 141, 179
BsaXI ACNNNNNCTCC 2 cut(s) 371, 401
Bsc4I CCNNNNNNNGG 5 cut(s) 107, 186, 613, 1141, 1175
Bse118I RCCGGY 2 cut(s) 83, 1082
Bse1I ACTGG 5 cut(s) 702, 745, 1146, 1335, 1447
Bse3DI GCAATG 2 cut(s) 871, 1739
Bse8I GATNNNNATC 2 cut(s) 1170, 1265
BseAI TCCGGA 1 cut(s) 141
BseBI CCWGG 3 cut(s) 524, 1176, 1347
BseCI ATCGAT 2 cut(s) 1041, 1269
BseDI CCNNGG 3 cut(s) 255, 1159, 1346
BseGI GGATG 3 cut(s) 754, 1171, 1663
BseJI GATNNNNATC 2 cut(s) 1170, 1265
BseLI CCNNNNNNNGG 5 cut(s) 107, 186, 613, 1141, 1175
BseMI GCAATG 2 cut(s) 871, 1739
BseMII CTCAG 3 cut(s) 47, 227, 861
BseNI ACTGG 5 cut(s) 702, 745, 1146, 1335, 1447
BseRI GAGGAG 2 cut(s) 653, 923
BseSI GKGCMC 1 cut(s) 1058
BseXI GCAGC 7 cut(s) 44, 274, 685, 707, 1111, 1561, 1740
BseYI CCCAGC 1 cut(s) 1618
BsgI GTGCAG 1 cut(s) 7
Bsh1236I CGCG 3 cut(s) 176, 187, 279
Bsh1285I CGRYCG 1 cut(s) 180
BshFI GGCC 3 cut(s) 502, 522, 772
BshVI ATCGAT 2 cut(s) 1041, 1269
BsiEI CGRYCG 1 cut(s) 180
BsiHKAI GWGCWC 4 cut(s) 62, 469, 876, 1058
BsiHKCI CYCGRG 1 cut(s) 311
BsiSI CCGG 5 cut(s) 84, 142, 160, 180, 1083
BslFI GGGAC 1 cut(s) 1363
BslI CCNNNNNNNGG 5 cut(s) 107, 186, 613, 1141, 1175
BsmAI GTCTC 2 cut(s) 308, 1363
BsmFI GGGAC 1 cut(s) 1363
BsmI GAATGC 2 cut(s) 175, 579
BsnI GGCC 3 cut(s) 502, 522, 772
BsoBI CYCGRG 1 cut(s) 311
Bsp119I TTCGAA 2 cut(s) 167, 1432
Bsp1286I GDGCHC 4 cut(s) 62, 469, 876, 1058
Bsp13I TCCGGA 1 cut(s) 141
Bsp143I GATC 9 cut(s) 219, 442, 799, 970, 1038, 1165, 1266, 1511, 1609
Bsp1720I GCTNAGC 2 cut(s) 236, 870
Bsp19I CCATGG 2 cut(s) 255, 1159
BspANI GGCC 3 cut(s) 502, 522, 772
BspCNI CTCAG 3 cut(s) 48, 228, 862
BspDI ATCGAT 2 cut(s) 1041, 1269
BspEI TCCGGA 1 cut(s) 141
BspFNI CGCG 3 cut(s) 176, 187, 279
BspLI GGNNCC 3 cut(s) 158, 501, 1344
BspPI GGATC 6 cut(s) 450, 807, 965, 1046, 1160, 1604
BspT104I TTCGAA 2 cut(s) 167, 1432
BsrDI GCAATG 2 cut(s) 871, 1739
BsrFI RCCGGY 2 cut(s) 83, 1082
BsrI ACTGG 5 cut(s) 702, 745, 1146, 1335, 1447
BssAI RCCGGY 2 cut(s) 83, 1082
BssECI CCNNGG 3 cut(s) 255, 1159, 1346
BssMI GATC 9 cut(s) 219, 442, 799, 970, 1038, 1165, 1266, 1511, 1609
BssNAI GTATAC 1 cut(s) 306
BssNI GRCGYC 1 cut(s) 200
BssT1I CCWWGG 2 cut(s) 255, 1159
Bst1107I GTATAC 1 cut(s) 306
Bst2UI CCWGG 3 cut(s) 524, 1176, 1347
Bst4CI ACNGT 5 cut(s) 102, 319, 979, 1111, 1416
Bst6I CTCTTC 2 cut(s) 130, 630
BstACI GRCGYC 1 cut(s) 200
BstBAI YACGTR 3 cut(s) 27, 734, 1019
BstBI TTCGAA 2 cut(s) 167, 1432
BstC8I GCNNGC 5 cut(s) 290, 465, 520, 934, 1746
BstDEI CTNAG 5 cut(s) 56, 236, 476, 870, 1241
BstDSI CCRYGG 2 cut(s) 255, 1159
BstF5I GGATG 3 cut(s) 754, 1171, 1663
BstFNI CGCG 3 cut(s) 176, 187, 279
BstH2I RGCGCY 1 cut(s) 252
BstHHI GCGC 4 cut(s) 32, 251, 279, 1134
BstKTI GATC 9 cut(s) 222, 445, 802, 973, 1041, 1168, 1269, 1514, 1612
BstMAI GTCTC 2 cut(s) 308, 1363
BstMBI GATC 9 cut(s) 219, 442, 799, 970, 1038, 1165, 1266, 1511, 1609
BstMCI CGRYCG 1 cut(s) 180
BstMWI GCNNNNNNNGC 5 cut(s) 246, 285, 1246, 1382, 1745
BstNI CCWGG 3 cut(s) 524, 1176, 1347
BstPAI GACNNNNGTC 1 cut(s) 1355
BstSCI CCNGG 4 cut(s) 159, 522, 1174, 1345
BstSFI CTRYAG 1 cut(s) 848
BstSLI GKGCMC 1 cut(s) 1058
BstUI CGCG 3 cut(s) 176, 187, 279
BstV1I GCAGC 7 cut(s) 44, 274, 685, 707, 1111, 1561, 1740
BstV2I GAAGAC 1 cut(s) 195
BstX2I RGATCY 4 cut(s) 799, 1165, 1511, 1609
BstYI RGATCY 4 cut(s) 799, 1165, 1511, 1609
BstZ17I GTATAC 1 cut(s) 306
Bsu15I ATCGAT 2 cut(s) 1041, 1269
BsuRI GGCC 3 cut(s) 502, 522, 772
BsuTUI ATCGAT 2 cut(s) 1041, 1269
BtgI CCRYGG 2 cut(s) 255, 1159
BtgZI GCGATG 1 cut(s) 342
BtsCI GGATG 3 cut(s) 754, 1171, 1663
BtsIMutI CAGTG 2 cut(s) 738, 1126
Cac8I GCNNGC 5 cut(s) 290, 465, 520, 934, 1746
CfoI GCGC 4 cut(s) 32, 251, 279, 1134
Cfr10I RCCGGY 2 cut(s) 83, 1082
Cfr13I GGNCC 3 cut(s) 98, 500, 1013
ClaI ATCGAT 2 cut(s) 1041, 1269
CseI GACGC 1 cut(s) 189
Csp6I GTAC 2 cut(s) 816, 1646
CviAII CATG 5 cut(s) 256, 565, 1160, 1283, 1720
CviQI GTAC 2 cut(s) 816, 1646
DdeI CTNAG 5 cut(s) 56, 236, 476, 870, 1241
DpnI GATC 9 cut(s) 221, 444, 801, 972, 1040, 1167, 1268, 1513, 1611
DpnII GATC 9 cut(s) 219, 442, 799, 970, 1038, 1165, 1266, 1511, 1609
DraI TTTAAA 1 cut(s) 964
DrdI GACNNNNNNGTC 1 cut(s) 431
DseDI GACNNNNNNGTC 1 cut(s) 431
EaeI YGGCCR 1 cut(s) 520
Eam1104I CTCTTC 2 cut(s) 130, 630
EarI CTCTTC 2 cut(s) 130, 630
EciI GGCGGA 1 cut(s) 205
Ecl136II GAGCTC 2 cut(s) 60, 874
Eco130I CCWWGG 2 cut(s) 255, 1159
Eco24I GRGCYC 2 cut(s) 62, 876
Eco47I GGWCC 2 cut(s) 98, 1013
Eco53kI GAGCTC 2 cut(s) 60, 874
Eco72I CACGTG 2 cut(s) 27, 1019
Eco88I CYCGRG 1 cut(s) 311
EcoICRI GAGCTC 2 cut(s) 60, 874
EcoO109I RGGNCCY 1 cut(s) 500
EcoRI GAATTC 3 cut(s) 4, 887, 1396
EcoRII CCWGG 3 cut(s) 522, 1174, 1345
EcoT14I CCWWGG 2 cut(s) 255, 1159
EcoT38I GRGCYC 2 cut(s) 62, 876
ErhI CCWWGG 2 cut(s) 255, 1159
FaeI CATG 5 cut(s) 259, 568, 1163, 1286, 1723
FalI AAGNNNNNCTT 2 cut(s) 936, 968
FaqI GGGAC 1 cut(s) 1363
FatI CATG 5 cut(s) 255, 564, 1159, 1282, 1719
FauI CCCGC 3 cut(s) 52, 143, 941
FauNDI CATATG 1 cut(s) 1585
FblI GTMKAC 3 cut(s) 305, 410, 847
FokI GGATG 3 cut(s) 761, 1158, 1670
FriOI GRGCYC 2 cut(s) 62, 876
FspBI CTAG 3 cut(s) 246, 1025, 1682
FspI TGCGCA 1 cut(s) 31
GlaI GCGC 4 cut(s) 31, 250, 278, 1133
GsaI CCCAGC 1 cut(s) 1622
GsuI CTGGAG 1 cut(s) 87
HaeII RGCGCY 1 cut(s) 252
HaeIII GGCC 3 cut(s) 502, 522, 772
HapII CCGG 5 cut(s) 84, 142, 160, 180, 1083
HgaI GACGC 1 cut(s) 189
HhaI GCGC 4 cut(s) 32, 251, 279, 1134
Hin1I GRCGYC 1 cut(s) 200
Hin1II CATG 5 cut(s) 259, 568, 1163, 1286, 1723
Hin6I GCGC 4 cut(s) 30, 249, 277, 1132
HinP1I GCGC 4 cut(s) 30, 249, 277, 1132
HincII GTYRAC 1 cut(s) 650
HindII GTYRAC 1 cut(s) 650
HindIII AAGCTT 1 cut(s) 899
HinfI GANTC 5 cut(s) 138, 338, 840, 1116, 1522
HpaII CCGG 5 cut(s) 84, 142, 160, 180, 1083
HphI GGTGA 2 cut(s) 905, 1315
Hpy188I TCNGA 6 cut(s) 57, 106, 437, 554, 1420, 1511
Hpy188III TCNNGA 9 cut(s) 142, 311, 369, 446, 953, 982, 1487, 1526, 1568
Hpy99I CGWCG 3 cut(s) 106, 215, 437
HpyAV CCTTC 3 cut(s) 101, 432, 513
HpyCH4III ACNGT 5 cut(s) 102, 319, 979, 1111, 1416
HpyCH4IV ACGT 5 cut(s) 26, 733, 993, 1018, 1204
HpyF10VI GCNNNNNNNGC 5 cut(s) 246, 285, 1246, 1382, 1745
HpyF3I CTNAG 5 cut(s) 56, 236, 476, 870, 1241
HpySE526I ACGT 5 cut(s) 26, 733, 993, 1018, 1204
Hsp92I GRCGYC 1 cut(s) 200
Hsp92II CATG 5 cut(s) 259, 568, 1163, 1286, 1723
HspAI GCGC 4 cut(s) 30, 249, 277, 1132
Kpn2I TCCGGA 1 cut(s) 141
Kzo9I GATC 9 cut(s) 219, 442, 799, 970, 1038, 1165, 1266, 1511, 1609
LmnI GCTCC 7 cut(s) 40, 65, 68, 192, 259, 910, 1348
Lsp1109I GCAGC 7 cut(s) 44, 274, 685, 707, 1111, 1561, 1740
LweI GCATC 4 cut(s) 61, 365, 1180, 1261
MaeI CTAG 3 cut(s) 246, 1025, 1682
MaeII ACGT 5 cut(s) 26, 733, 993, 1018, 1204
MaeIII GTNAC 3 cut(s) 734, 1438, 1807
MalI GATC 9 cut(s) 221, 444, 801, 972, 1040, 1167, 1268, 1513, 1611
MboI GATC 9 cut(s) 219, 442, 799, 970, 1038, 1165, 1266, 1511, 1609
MboII GAAGA 7 cut(s) 147, 195, 569, 647, 956, 1758, 1783
MflI RGATCY 4 cut(s) 799, 1165, 1511, 1609
MhlI GDGCHC 4 cut(s) 62, 469, 876, 1058
MlsI TGGCCA 1 cut(s) 522
MluNI TGGCCA 1 cut(s) 522
MlyI GAGTC 3 cut(s) 147, 1125, 1516
MmeI TCCRAC 5 cut(s) 84, 92, 315, 415, 1093
Mox20I TGGCCA 1 cut(s) 522
MroI TCCGGA 1 cut(s) 141
MroXI GAANNNNTTC 2 cut(s) 453, 948
MscI TGGCCA 1 cut(s) 522
MseI TTAA 7 cut(s) 759, 833, 963, 1106, 1425, 1452, 1653
Msp20I TGGCCA 1 cut(s) 522
MspA1I CMGCKG 2 cut(s) 65, 698
MspI CCGG 5 cut(s) 84, 142, 160, 180, 1083
MspR9I CCNGG 4 cut(s) 161, 524, 1176, 1347
Mva1269I GAATGC 2 cut(s) 175, 579
MvaI CCWGG 3 cut(s) 524, 1176, 1347
MvnI CGCG 3 cut(s) 176, 187, 279
MwoI GCNNNNNNNGC 5 cut(s) 246, 285, 1246, 1382, 1745
NciI CCSGG 1 cut(s) 161
NcoI CCATGG 2 cut(s) 255, 1159
NdeI CATATG 1 cut(s) 1585
NdeII GATC 9 cut(s) 219, 442, 799, 970, 1038, 1165, 1266, 1511, 1609
NlaIII CATG 5 cut(s) 259, 568, 1163, 1286, 1723
NlaIV GGNNCC 3 cut(s) 158, 501, 1344
NmuCI GTSAC 1 cut(s) 734
NsbI TGCGCA 1 cut(s) 31
NspV TTCGAA 2 cut(s) 167, 1432
PcsI WCGNNNNNNNCGW 4 cut(s) 173, 279, 365, 1275
PctI GAATGC 2 cut(s) 175, 579
PdmI GAANNNNTTC 2 cut(s) 453, 948
PfeI GAWTC 2 cut(s) 338, 840
PflMI CCANNNNNTGG 1 cut(s) 1141
PfoI TCCNGGA 1 cut(s) 1174
PleI GAGTC 3 cut(s) 146, 1124, 1516
PmaCI CACGTG 2 cut(s) 27, 1019
PmlI CACGTG 2 cut(s) 27, 1019
PpsI GAGTC 3 cut(s) 146, 1124, 1516
Ppu21I YACGTR 3 cut(s) 27, 734, 1019
PshAI GACNNNNGTC 1 cut(s) 1355
Psp124BI GAGCTC 2 cut(s) 62, 876
Psp6I CCWGG 3 cut(s) 522, 1174, 1345
PspCI CACGTG 2 cut(s) 27, 1019
PspFI CCCAGC 1 cut(s) 1618
PspGI CCWGG 3 cut(s) 522, 1174, 1345
PspN4I GGNNCC 3 cut(s) 158, 501, 1344
PspPI GGNCC 3 cut(s) 98, 500, 1013
PsrI GAACNNNNNNTAC 2 cut(s) 1623, 1655
PsuI RGATCY 4 cut(s) 799, 1165, 1511, 1609
PvuII CAGCTG 1 cut(s) 698
RsaI GTAC 2 cut(s) 817, 1647
RsaNI GTAC 2 cut(s) 816, 1646
SacI GAGCTC 2 cut(s) 62, 876
SaqAI TTAA 7 cut(s) 759, 833, 963, 1106, 1425, 1452, 1653
Sau3AI GATC 9 cut(s) 219, 442, 799, 970, 1038, 1165, 1266, 1511, 1609
Sau96I GGNCC 3 cut(s) 98, 500, 1013
ScaI AGTACT 1 cut(s) 1647
SchI GAGTC 3 cut(s) 147, 1125, 1516
ScrFI CCNGG 4 cut(s) 161, 524, 1176, 1347
SduI GDGCHC 4 cut(s) 62, 469, 876, 1058
SfaNI GCATC 4 cut(s) 61, 365, 1180, 1261
SfcI CTRYAG 1 cut(s) 848
SfuI TTCGAA 2 cut(s) 167, 1432
SinI GGWCC 2 cut(s) 98, 1013
SmlI CTYRAG 3 cut(s) 953, 1524, 1568
SmoI CTYRAG 3 cut(s) 953, 1524, 1568
SspI AATATT 1 cut(s) 940
SspMI CTAG 3 cut(s) 246, 1025, 1682
SstI GAGCTC 2 cut(s) 62, 876
StyD4I CCNGG 4 cut(s) 159, 522, 1174, 1345
StyI CCWWGG 2 cut(s) 255, 1159
TaaI ACNGT 5 cut(s) 102, 319, 979, 1111, 1416
TaiI ACGT 5 cut(s) 29, 736, 996, 1021, 1207
TaqI TCGA 9 cut(s) 167, 206, 267, 273, 368, 469, 1041, 1269, 1432
TatI WGTACW 1 cut(s) 1645
TauI GCSGC 5 cut(s) 176, 190, 254, 282, 1681
TfiI GAWTC 2 cut(s) 338, 840
Tru1I TTAA 7 cut(s) 759, 833, 963, 1106, 1425, 1452, 1653
Tru9I TTAA 7 cut(s) 759, 833, 963, 1106, 1425, 1452, 1653
TscAI CASTG 2 cut(s) 745, 1126
TseFI GTSAC 1 cut(s) 734
TseI GCWGC 7 cut(s) 32, 262, 695, 698, 1124, 1549, 1728
Tsp45I GTSAC 1 cut(s) 734
TspDTI ATGAA 7 cut(s) 17, 499, 581, 585, 816, 900, 1470
TspGWI ACGGA 3 cut(s) 27, 591, 803
TspRI CASTG 2 cut(s) 745, 1126
Van91I CCANNNNNTGG 1 cut(s) 1141
VneI GTGCAC 1 cut(s) 1054
VpaK11BI GGWCC 2 cut(s) 98, 1013
XapI RAATTY 5 cut(s) 4, 887, 1145, 1396, 1562
XmiI GTMKAC 3 cut(s) 305, 410, 847
XmnI GAANNNNTTC 2 cut(s) 453, 948
XspI CTAG 3 cut(s) 246, 1025, 1682
ZrmI AGTACT 1 cut(s) 1647
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.