protein binding
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G34660 AT4G34660 AT4G34660 |
| fragaria_vesca | FvH4_2g39000 |
| malus_domestica | MD08G1018500.v1.1 MD08G1018900.v1.1 MD08G1019500.v1.1 MD08G1019700.v1.1 MD08G1019800.v1.1 MD08G1020600.v1.1 MD08G1020900.v1.1 MD15G1017700.v1.1 MD15G1018500.v1.1 |
| prunus_persica | Prupe.1G371000_v2.0.a1 |
| pyrus_communis | pycom08g01650 pycom15g01560 |
| rosa_chinensis | RchiOBHm_Chr6g0302101 |
| rosa_laevigata | RLG00000011195 |
| rosa_multiflora | Rmu_co8454099.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00166080 |
| rosa_rugosa | Rorug06G0312400 |
| rosa_samantha | Rh6AG424700 Rh6BG477700 Rh6CG437600 Rh6DG424600 |
| rosa_wichuraiana | Rw6G036780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 3 cut(s) | 379, 527, 1019 |
| Acc65I | GGTACC | 1 cut(s) | 239 |
| AccB1I | GGYRCC | 1 cut(s) | 239 |
| AccII | CGCG | 1 cut(s) | 312 |
| AccIII | TCCGGA | 2 cut(s) | 12, 978 |
| AciI | CCGC | 4 cut(s) | 310, 701, 1060, 1089 |
| AcoI | YGGCCR | 1 cut(s) | 1086 |
| AcsI | RAATTY | 1 cut(s) | 363 |
| AcuI | CTGAAG | 4 cut(s) | 504, 569, 659, 1026 |
| AfaI | GTAC | 4 cut(s) | 80, 241, 289, 917 |
| AflIII | ACRYGT | 2 cut(s) | 300, 1066 |
| AgsI | TTSAA | 8 cut(s) | 58, 222, 233, 698, 749, 782, 926, 990 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 515 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1015, 1047 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 256, 288 |
| Alw21I | GWGCWC | 2 cut(s) | 337, 427 |
| Alw26I | GTCTC | 1 cut(s) | 466 |
| Alw44I | GTGCAC | 1 cut(s) | 423 |
| Ama87I | CYCGRG | 1 cut(s) | 134 |
| Aor13HI | TCCGGA | 2 cut(s) | 12, 978 |
| AoxI | GGCC | 1 cut(s) | 1086 |
| ApaLI | GTGCAC | 1 cut(s) | 423 |
| ApeKI | GCWGC | 9 cut(s) | 43, 121, 314, 569, 626, 629, 632, 641, 800 |
| ApoI | RAATTY | 1 cut(s) | 363 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 143, 1068 |
| Asp718I | GGTACC | 1 cut(s) | 239 |
| AspLEI | GCGC | 2 cut(s) | 314, 708 |
| AsuC2I | CCSGG | 1 cut(s) | 1040 |
| AsuHPI | GGTGA | 1 cut(s) | 1022 |
| AvaI | CYCGRG | 1 cut(s) | 134 |
| BaeGI | GKGCMC | 2 cut(s) | 343, 427 |
| BanI | GGYRCC | 1 cut(s) | 239 |
| BanII | GRGCYC | 1 cut(s) | 337 |
| BauI | CACGAG | 2 cut(s) | 156, 336 |
| BbsI | GAAGAC | 1 cut(s) | 46 |
| Bbv12I | GWGCWC | 2 cut(s) | 337, 427 |
| BbvI | GCAGC | 9 cut(s) | 55, 133, 301, 556, 613, 616, 644, 653, 787 |
| BccI | CCATC | 1 cut(s) | 406 |
| BceAI | ACGGC | 1 cut(s) | 527 |
| BcnI | CCSGG | 1 cut(s) | 1040 |
| BcoDI | GTCTC | 1 cut(s) | 466 |
| BfaI | CTAG | 2 cut(s) | 227, 563 |
| BfmI | CTRYAG | 4 cut(s) | 534, 630, 645, 801 |
| BfuAI | ACCTGC | 3 cut(s) | 379, 527, 1019 |
| Bme1390I | CCNGG | 1 cut(s) | 1040 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 515 |
| BmeT110I | CYCGRG | 1 cut(s) | 134 |
| BmiI | GGNNCC | 2 cut(s) | 241, 1037 |
| BmrFI | CCNGG | 1 cut(s) | 1040 |
| BmrI | ACTGGG | 1 cut(s) | 786 |
| BmsI | GCATC | 3 cut(s) | 133, 427, 794 |
| BmuI | ACTGGG | 1 cut(s) | 786 |
| BpiI | GAAGAC | 1 cut(s) | 46 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 655, 687 |
| BpmI | CTGGAG | 2 cut(s) | 101, 713 |
| Bpu10I | CCTNAGC | 1 cut(s) | 489 |
| BpuMI | CCSGG | 1 cut(s) | 1040 |
| BsaAI | YACGTR | 1 cut(s) | 1051 |
| BsaJI | CCNNGG | 3 cut(s) | 379, 429, 690 |
| BsaWI | WCCGGW | 2 cut(s) | 12, 978 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 746, 776, 802, 832 |
| Bse118I | RCCGGY | 1 cut(s) | 161 |
| Bse1I | ACTGG | 3 cut(s) | 220, 298, 792 |
| Bse3DI | GCAATG | 1 cut(s) | 642 |
| BseAI | TCCGGA | 2 cut(s) | 12, 978 |
| BseDI | CCNNGG | 3 cut(s) | 379, 429, 690 |
| BseGI | GGATG | 1 cut(s) | 442 |
| BseMI | GCAATG | 1 cut(s) | 642 |
| BseMII | CTCAG | 3 cut(s) | 11, 311, 503 |
| BseNI | ACTGG | 3 cut(s) | 220, 298, 792 |
| BseSI | GKGCMC | 2 cut(s) | 343, 427 |
| BseXI | GCAGC | 9 cut(s) | 55, 133, 301, 556, 613, 616, 644, 653, 787 |
| BsgI | GTGCAG | 1 cut(s) | 300 |
| Bsh1236I | CGCG | 1 cut(s) | 312 |
| BshFI | GGCC | 1 cut(s) | 1088 |
| BshNI | GGYRCC | 1 cut(s) | 239 |
| BsiHKAI | GWGCWC | 2 cut(s) | 337, 427 |
| BsiHKCI | CYCGRG | 1 cut(s) | 134 |
| BsiSI | CCGG | 4 cut(s) | 13, 162, 979, 1040 |
| BslFI | GGGAC | 1 cut(s) | 905 |
| BsmAI | GTCTC | 1 cut(s) | 466 |
| BsmFI | GGGAC | 1 cut(s) | 905 |
| BsnI | GGCC | 1 cut(s) | 1088 |
| BsoBI | CYCGRG | 1 cut(s) | 134 |
| Bsp1286I | GDGCHC | 3 cut(s) | 337, 343, 427 |
| Bsp13I | TCCGGA | 2 cut(s) | 12, 978 |
| Bsp1407I | TGTACA | 1 cut(s) | 915 |
| Bsp143I | GATC | 1 cut(s) | 25 |
| Bsp19I | CCATGG | 1 cut(s) | 690 |
| BspACI | CCGC | 4 cut(s) | 310, 701, 1060, 1089 |
| BspANI | GGCC | 1 cut(s) | 1088 |
| BspCNI | CTCAG | 3 cut(s) | 12, 312, 502 |
| BspEI | TCCGGA | 2 cut(s) | 12, 978 |
| BspFNI | CGCG | 1 cut(s) | 312 |
| BspHI | TCATGA | 1 cut(s) | 555 |
| BspLI | GGNNCC | 2 cut(s) | 241, 1037 |
| BspMAI | CTGCAG | 3 cut(s) | 538, 634, 805 |
| BspMI | ACCTGC | 3 cut(s) | 379, 527, 1019 |
| BspQI | GCTCTTC | 1 cut(s) | 325 |
| BspT107I | GGYRCC | 1 cut(s) | 239 |
| BsrDI | GCAATG | 1 cut(s) | 642 |
| BsrFI | RCCGGY | 1 cut(s) | 161 |
| BsrGI | TGTACA | 1 cut(s) | 915 |
| BsrI | ACTGG | 3 cut(s) | 220, 298, 792 |
| BssAI | RCCGGY | 1 cut(s) | 161 |
| BssECI | CCNNGG | 3 cut(s) | 379, 429, 690 |
| BssMI | GATC | 1 cut(s) | 25 |
| BssSI | CACGAG | 2 cut(s) | 156, 336 |
| BssT1I | CCWWGG | 3 cut(s) | 379, 429, 690 |
| Bst2BI | CACGAG | 2 cut(s) | 156, 336 |
| Bst4CI | ACNGT | 2 cut(s) | 464, 998 |
| Bst6I | CTCTTC | 3 cut(s) | 325, 678, 831 |
| BstAUI | TGTACA | 1 cut(s) | 915 |
| BstBAI | YACGTR | 1 cut(s) | 1051 |
| BstC8I | GCNNGC | 5 cut(s) | 48, 163, 167, 386, 1078 |
| BstDEI | CTNAG | 4 cut(s) | 20, 320, 489, 901 |
| BstDSI | CCRYGG | 1 cut(s) | 690 |
| BstF5I | GGATG | 1 cut(s) | 442 |
| BstFNI | CGCG | 1 cut(s) | 312 |
| BstHHI | GCGC | 2 cut(s) | 314, 708 |
| BstKTI | GATC | 1 cut(s) | 28 |
| BstMAI | GTCTC | 1 cut(s) | 466 |
| BstMBI | GATC | 1 cut(s) | 25 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 575, 632, 638, 641 |
| BstNSI | RCATGY | 1 cut(s) | 79 |
| BstSCI | CCNGG | 1 cut(s) | 1038 |
| BstSFI | CTRYAG | 4 cut(s) | 534, 630, 645, 801 |
| BstSLI | GKGCMC | 2 cut(s) | 343, 427 |
| BstSNI | TACGTA | 1 cut(s) | 1051 |
| BstUI | CGCG | 1 cut(s) | 312 |
| BstV1I | GCAGC | 9 cut(s) | 55, 133, 301, 556, 613, 616, 644, 653, 787 |
| BstV2I | GAAGAC | 1 cut(s) | 46 |
| BsuRI | GGCC | 1 cut(s) | 1088 |
| BtgI | CCRYGG | 1 cut(s) | 690 |
| BtgZI | GCGATG | 2 cut(s) | 425, 771 |
| BtsCI | GGATG | 1 cut(s) | 442 |
| BtsIMutI | CAGTG | 2 cut(s) | 291, 317 |
| BveI | ACCTGC | 3 cut(s) | 379, 527, 1019 |
| Cac8I | GCNNGC | 5 cut(s) | 48, 163, 167, 386, 1078 |
| CciI | TCATGA | 1 cut(s) | 555 |
| CfoI | GCGC | 2 cut(s) | 314, 708 |
| Cfr10I | RCCGGY | 1 cut(s) | 161 |
| Csp6I | GTAC | 4 cut(s) | 79, 240, 288, 916 |
| CviAII | CATG | 5 cut(s) | 76, 556, 691, 848, 869 |
| CviQI | GTAC | 4 cut(s) | 79, 240, 288, 916 |
| DdeI | CTNAG | 4 cut(s) | 20, 320, 489, 901 |
| DpnI | GATC | 1 cut(s) | 27 |
| DpnII | GATC | 1 cut(s) | 25 |
| DriI | GACNNNNNGTC | 1 cut(s) | 515 |
| EaeI | YGGCCR | 1 cut(s) | 1086 |
| Eam1104I | CTCTTC | 3 cut(s) | 325, 678, 831 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 515 |
| EarI | CTCTTC | 3 cut(s) | 325, 678, 831 |
| Ecl136II | GAGCTC | 1 cut(s) | 335 |
| Eco105I | TACGTA | 1 cut(s) | 1051 |
| Eco130I | CCWWGG | 3 cut(s) | 379, 429, 690 |
| Eco24I | GRGCYC | 1 cut(s) | 337 |
| Eco32I | GATATC | 1 cut(s) | 184 |
| Eco53kI | GAGCTC | 1 cut(s) | 335 |
| Eco57I | CTGAAG | 4 cut(s) | 504, 569, 659, 1026 |
| Eco88I | CYCGRG | 1 cut(s) | 134 |
| EcoICRI | GAGCTC | 1 cut(s) | 335 |
| EcoRI | GAATTC | 1 cut(s) | 363 |
| EcoRV | GATATC | 1 cut(s) | 184 |
| EcoT14I | CCWWGG | 3 cut(s) | 379, 429, 690 |
| EcoT38I | GRGCYC | 1 cut(s) | 337 |
| ErhI | CCWWGG | 3 cut(s) | 379, 429, 690 |
| FaeI | CATG | 5 cut(s) | 79, 559, 694, 851, 872 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 567, 599, 940, 972 |
| FaqI | GGGAC | 1 cut(s) | 905 |
| FatI | CATG | 5 cut(s) | 75, 555, 690, 847, 868 |
| FauI | CCCGC | 2 cut(s) | 317, 1053 |
| FauNDI | CATATG | 1 cut(s) | 832 |
| FokI | GGATG | 1 cut(s) | 449 |
| FriOI | GRGCYC | 1 cut(s) | 337 |
| FspBI | CTAG | 2 cut(s) | 227, 563 |
| GlaI | GCGC | 2 cut(s) | 313, 707 |
| GsuI | CTGGAG | 2 cut(s) | 101, 713 |
| HaeIII | GGCC | 1 cut(s) | 1088 |
| HapII | CCGG | 4 cut(s) | 13, 162, 979, 1040 |
| HhaI | GCGC | 2 cut(s) | 314, 708 |
| Hin1II | CATG | 5 cut(s) | 79, 559, 694, 851, 872 |
| Hin6I | GCGC | 2 cut(s) | 312, 706 |
| HinP1I | GCGC | 2 cut(s) | 312, 706 |
| HincII | GTYRAC | 4 cut(s) | 656, 669, 844, 1045 |
| HindII | GTYRAC | 4 cut(s) | 656, 669, 844, 1045 |
| HinfI | GANTC | 3 cut(s) | 154, 530, 670 |
| HpaI | GTTAAC | 1 cut(s) | 1045 |
| HpaII | CCGG | 4 cut(s) | 13, 162, 979, 1040 |
| HphI | GGTGA | 1 cut(s) | 1022 |
| Hpy166II | GTNNAC | 7 cut(s) | 103, 425, 656, 669, 844, 918, 1045 |
| Hpy188I | TCNGA | 8 cut(s) | 91, 129, 253, 277, 547, 720, 766, 862 |
| Hpy188III | TCNNGA | 7 cut(s) | 13, 136, 507, 556, 587, 730, 979 |
| Hpy8I | GTNNAC | 7 cut(s) | 103, 425, 656, 669, 844, 918, 1045 |
| HpyAV | CCTTC | 5 cut(s) | 194, 644, 743, 976, 1001 |
| HpyCH4III | ACNGT | 2 cut(s) | 464, 998 |
| HpyCH4IV | ACGT | 3 cut(s) | 302, 1050, 1066 |
| HpyCH4V | TGCA | 8 cut(s) | 317, 395, 425, 536, 608, 632, 803, 1017 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 575, 632, 638, 641 |
| HpyF3I | CTNAG | 4 cut(s) | 20, 320, 489, 901 |
| HpySE526I | ACGT | 3 cut(s) | 302, 1050, 1066 |
| Hsp92II | CATG | 5 cut(s) | 79, 559, 694, 851, 872 |
| HspAI | GCGC | 2 cut(s) | 312, 706 |
| Kpn2I | TCCGGA | 2 cut(s) | 12, 978 |
| KpnI | GGTACC | 1 cut(s) | 243 |
| KroI | GCCGGC | 1 cut(s) | 161 |
| KroNI | GCCGGC | 1 cut(s) | 163 |
| KspAI | GTTAAC | 1 cut(s) | 1045 |
| Kzo9I | GATC | 1 cut(s) | 25 |
| LguI | GCTCTTC | 1 cut(s) | 325 |
| LmnI | GCTCC | 2 cut(s) | 589, 703 |
| Lsp1109I | GCAGC | 9 cut(s) | 55, 133, 301, 556, 613, 616, 644, 653, 787 |
| LweI | GCATC | 3 cut(s) | 133, 427, 794 |
| MaeI | CTAG | 2 cut(s) | 227, 563 |
| MaeII | ACGT | 3 cut(s) | 302, 1050, 1066 |
| MaeIII | GTNAC | 3 cut(s) | 211, 296, 931 |
| MalI | GATC | 1 cut(s) | 27 |
| MboI | GATC | 1 cut(s) | 25 |
| MboII | GAAGA | 5 cut(s) | 46, 266, 342, 665, 848 |
| MhlI | GDGCHC | 3 cut(s) | 337, 343, 427 |
| MluCI | AATT | 5 cut(s) | 62, 363, 541, 709, 777 |
| MlyI | GAGTC | 2 cut(s) | 148, 664 |
| MnlI | CCTC | 8 cut(s) | 427, 519, 657, 737, 828, 832, 838, 901 |
| MroI | TCCGGA | 2 cut(s) | 12, 978 |
| MroNI | GCCGGC | 1 cut(s) | 161 |
| MroXI | GAANNNNTTC | 2 cut(s) | 143, 1068 |
| MseI | TTAA | 6 cut(s) | 404, 738, 878, 947, 1044, 1099 |
| MslI | CAYNNNNRTG | 1 cut(s) | 720 |
| MspA1I | CMGCKG | 2 cut(s) | 644, 800 |
| MspI | CCGG | 4 cut(s) | 13, 162, 979, 1040 |
| MspR9I | CCNGG | 1 cut(s) | 1040 |
| MvnI | CGCG | 1 cut(s) | 312 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 575, 632, 638, 641 |
| NaeI | GCCGGC | 1 cut(s) | 163 |
| NciI | CCSGG | 1 cut(s) | 1040 |
| NcoI | CCATGG | 1 cut(s) | 690 |
| NdeI | CATATG | 1 cut(s) | 832 |
| NdeII | GATC | 1 cut(s) | 25 |
| NgoMIV | GCCGGC | 1 cut(s) | 161 |
| NlaIII | CATG | 5 cut(s) | 79, 559, 694, 851, 872 |
| NlaIV | GGNNCC | 2 cut(s) | 241, 1037 |
| NspI | RCATGY | 1 cut(s) | 79 |
| PaeR7I | CTCGAG | 1 cut(s) | 134 |
| PagI | TCATGA | 1 cut(s) | 555 |
| PciSI | GCTCTTC | 1 cut(s) | 325 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 87 |
| PdiI | GCCGGC | 1 cut(s) | 163 |
| PdmI | GAANNNNTTC | 2 cut(s) | 143, 1068 |
| PfeI | GAWTC | 1 cut(s) | 530 |
| PleI | GAGTC | 2 cut(s) | 148, 664 |
| PpsI | GAGTC | 2 cut(s) | 148, 664 |
| Ppu21I | YACGTR | 1 cut(s) | 1051 |
| Psp124BI | GAGCTC | 1 cut(s) | 337 |
| PspN4I | GGNNCC | 2 cut(s) | 241, 1037 |
| PstI | CTGCAG | 3 cut(s) | 538, 634, 805 |
| PvuII | CAGCTG | 2 cut(s) | 644, 800 |
| RsaI | GTAC | 4 cut(s) | 80, 241, 289, 917 |
| RsaNI | GTAC | 4 cut(s) | 79, 240, 288, 916 |
| RseI | CAYNNNNRTG | 1 cut(s) | 720 |
| SacI | GAGCTC | 1 cut(s) | 337 |
| SapI | GCTCTTC | 1 cut(s) | 325 |
| SaqAI | TTAA | 6 cut(s) | 404, 738, 878, 947, 1044, 1099 |
| Sau3AI | GATC | 1 cut(s) | 25 |
| SchI | GAGTC | 2 cut(s) | 148, 664 |
| ScrFI | CCNGG | 1 cut(s) | 1040 |
| SduI | GDGCHC | 3 cut(s) | 337, 343, 427 |
| SfaNI | GCATC | 3 cut(s) | 133, 427, 794 |
| SfcI | CTRYAG | 4 cut(s) | 534, 630, 645, 801 |
| Sfr274I | CTCGAG | 1 cut(s) | 134 |
| SlaI | CTCGAG | 1 cut(s) | 134 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 720 |
| SmlI | CTYRAG | 1 cut(s) | 134 |
| SmoI | CTYRAG | 1 cut(s) | 134 |
| SnaBI | TACGTA | 1 cut(s) | 1051 |
| Sse9I | AATT | 5 cut(s) | 62, 363, 541, 709, 777 |
| SsiI | CCGC | 4 cut(s) | 310, 701, 1060, 1089 |
| SspI | AATATT | 1 cut(s) | 612 |
| SspMI | CTAG | 2 cut(s) | 227, 563 |
| SstI | GAGCTC | 1 cut(s) | 337 |
| StyD4I | CCNGG | 1 cut(s) | 1038 |
| StyI | CCWWGG | 3 cut(s) | 379, 429, 690 |
| TaaI | ACNGT | 2 cut(s) | 464, 998 |
| TaiI | ACGT | 3 cut(s) | 305, 1053, 1069 |
| TaqI | TCGA | 3 cut(s) | 135, 152, 442 |
| TasI | AATT | 5 cut(s) | 62, 363, 541, 709, 777 |
| TatI | WGTACW | 1 cut(s) | 915 |
| TauI | GCSGC | 1 cut(s) | 1091 |
| TfiI | GAWTC | 1 cut(s) | 530 |
| Tru1I | TTAA | 6 cut(s) | 404, 738, 878, 947, 1044, 1099 |
| Tru9I | TTAA | 6 cut(s) | 404, 738, 878, 947, 1044, 1099 |
| TscAI | CASTG | 2 cut(s) | 298, 324 |
| TseI | GCWGC | 9 cut(s) | 43, 121, 314, 569, 626, 629, 632, 641, 800 |
| TspDTI | ATGAA | 3 cut(s) | 136, 572, 849 |
| TspGWI | ACGGA | 1 cut(s) | 96 |
| TspRI | CASTG | 2 cut(s) | 298, 324 |
| VneI | GTGCAC | 1 cut(s) | 423 |
| XapI | RAATTY | 1 cut(s) | 363 |
| XceI | RCATGY | 1 cut(s) | 79 |
| XhoI | CTCGAG | 1 cut(s) | 134 |
| XmnI | GAANNNNTTC | 2 cut(s) | 143, 1068 |
| XspI | CTAG | 2 cut(s) | 227, 563 |