Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0010258

Physical Location & Seq

Genomic Coordinates Reverse (-)

1340958 .. 1345868

Gene Structure 4911 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g02650.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1932 bp

ATGGCTGACCTTCTGGTAGGACACTTGGTTCCCTTATGCAACCACGTCCAAGAAGACGCTTCAATCCCCAAAATACCCCTCTCCCGGGGCCGCAACTCCATCGGCCGCAACTCCGCCCCTTCCCTCACCGACAAGCGTCTCAGCCGCAACCACCTCTCCCTCACCGCCGCCGCTGACGACGCCTCCTCCTCCGCCGCTCTGGTCGTGGAGGGGAGCAATCCGGTTGTGGTAACTAGTGGAAATGATAGGAGGAAATTGTGTCATAAGGATAGCGTGACGATTCGAGACGGTGATGTTATTGAGATGATTCCAGGGAAGTATCTGTATCAGTATAGGACATTGTGTGGTGATGATTCTAAGAAGAGGTCAAATGCTGAAGAGAAGGCTGAGGAGTCGAGTCGAAAGCGGTTTAAGGGTGAGGGGGAAGGGACGAGTGATGGTGGTGGCGGTGGGCGTGTGGAGGCGATAAGGGATTTTCGTGTTCGTGATGATAAGTTGCCTCAGACGTTTCGGCTTTTGAATGTGCAAGGACTGCCACGGTGGGCGAATACCTCGTGCGTTTCTATAAAGGATGTGATTCAGGGAGACATCCTTTTTGCTGTCCTTTCCAATTACATGGTTGACCTTGATTGGCTGATACCTGCTTGTCCGACAGTTGCAAAAATCCCACATGTATTGGTTGTTCATGGTGAGGGTGATGGTACACTGGATTATATGAAGAGACAGAAACCTGCAAATTGGATTCTACACAAACCACCATTGCCTATTTCATTTGGGACACACCATTCAAAGGCCATGCTTCTCGTTTATCCTCGAGGAGTGAGAGTAATCGTACATACAGCAAACTTAATATTTGTTGATTGGAACAACAAAAGTCAAGGTTTGTGGATGCAAGATTTTCCCTGGAAAGATGAAAGTAATCCAAGCAAAGGTTGTGGATTTGAAAATGACTTAACTGACTATCTCAGTGCACTGAAGTGGCCCGCGTTTTCTGTTAATTTGCCTACCCTGGGAACCTTCAATATAAATCCCGGATTTTTCAAGAAATTCGATTATAGCAGTGCAGCAGTGAGGCTAATTGCATCGGTCCCTGGATATCATACCGGTAACAACATGAAAAAGTGGGGACATTTGAAACTACGTACTGTTCTCCAGGAGTGTACTTTTGATAAAGAGTTTCAGAAATCTCCTCTTGCTTATCAGTTTTCCTCCCTAGGTTCTTTGGATGAAAAATGGATGGCTGAGCTTGCATATTCAATGTCATCAGGTTTTTCGGATGATAAAACTCCTCTTGGTCCTGGGGAGCCACGTATAATATGGCCCACAGTAGAAGATATCAGATGTTCTATAGAGGGCTATGCTGCTGGAAATGCTGTTCCAAGTCCAGTAAAGAATGTGGAAAAAGATTTCTTGAAGAAGTACTGGGCAAGATGGAAGGCAAGCCACACTGGCCGCTGTCGTGCAATGCCACATATAAAGACATTTACTCGATACAATGGTCAGAAACTTGCTTGGTTTTTGCTGACATCAGCAAATCTTAGCAAAGCTGCATGGGGAGCTCTCCAGAAAAATAATTCTCAATTGATGATCCGTTCTTATGAGCTCGGGGTGCTGTTTCTGCCATATAAAACACGAAGTTCTGGATTTTCTTGTACCAGTAATGGGGTTCTATCTGAGGATAAATGTGAAAAGTCAGATGATTCAAAATTAGGGAGAAATAAACTAGTGACTCTGAACTGGCAAGGGAACAGGAACACAGACTCATCATCTGAGGTAGTCGCATTGCCTGTGCCTTACGAACTCCCTCCTCAACCATACACCGCCCAAGATGTTCCTTGGTCATGGGATCGGCGATACACCAAGAAAGACGTTTATGGTCTAGTTTGGCCGCGGCAAGTTCAGCTGTATGCAGCAGCTCTGCAAGATTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000012 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003697 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008081 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016787 GO:0016788 GO:0017005 GO:0033554 GO:0034641 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0070259 GO:0071704 GO:0071944 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FHA Tyr-DNA_phospho

Protein Analysis

644

Amino Acids

71.89

Weight (kDa)

9.12

Isoelectric Point (pI)

44.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tyr-DNA_phospho	PF06087	170 - 419	1.8e-48	Tyrosyl-DNA phosphodiesterase
Tyr-DNA_phospho	PF06087	400 - 557	3.1e-35	Tyrosyl-DNA phosphodiesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010258)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15170
fragaria_vesca	FvH4_3g02650 FvH4_3g02650
malus_domestica	MD10G1314700.v1.1
prunus_persica	Prupe.4G026100_v2.0.a1 Prupe.4G026100_v2.0.a1
pyrus_communis	pycom10g26680
rosa_chinensis	RchiOBHm_Chr5g0003961
rosa_laevigata	RLG00000031190 RLG00000031192
rosa_multiflora	Rmu_sc0000547.1_g000008
rosa_roxburghii	Rroxscaffold_1G00072010
rosa_rugosa	Rorug04G0408200.1 Rorug04G0408300.1 Rorug04G0408400 Rorug04G0408500
rosa_samantha	Rh5AG036200 Rh5BG035100 Rh5CG038800 Rh5DG034700
rosa_wichuraiana	Rw5G003300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	813
Acc36I	ACCTGC	2 cut(s)	649, 739
AccBSI	CCGCTC	1 cut(s)	197
AccII	CGCG	2 cut(s)	986, 1891
AclWI	GGATC	2 cut(s)	1582, 1854
AcoI	YGGCCR	3 cut(s)	103, 1450, 1886
AcsI	RAATTY	1 cut(s)	1046
AcuI	CTGAAG	2 cut(s)	396, 995
AcyI	GRCGYC	1 cut(s)	180
AfaI	GTAC	6 cut(s)	703, 834, 1144, 1162, 1421, 1654
AfiI	CCNNNNNNNGG	6 cut(s)	84, 85, 790, 929, 1010, 1662
AflIII	ACRYGT	1 cut(s)	670
AgeI	ACCGGT	1 cut(s)	1103
AhlI	ACTAGT	2 cut(s)	233, 1723
AjiI	CACGTC	1 cut(s)	46
AjnI	CCWGG	6 cut(s)	310, 902, 1008, 1090, 1152, 1297
AleI	CACNNNNGTG	1 cut(s)	976
AloI	GAACNNNNNNTCC	4 cut(s)	12, 44, 1359, 1391
AluBI	AGCT	6 cut(s)	1246, 1547, 1559, 1603, 1903, 1916
AluI	AGCT	6 cut(s)	1246, 1547, 1559, 1603, 1903, 1916
Alw21I	GWGCWC	3 cut(s)	973, 1561, 1605
Alw26I	GTCTC	4 cut(s)	143, 279, 579, 715
Alw44I	GTGCAC	1 cut(s)	969
AlwI	GGATC	2 cut(s)	1582, 1854
Ama87I	CYCGRG	3 cut(s)	84, 813, 1604
AoxI	GGCC	7 cut(s)	88, 103, 792, 980, 1319, 1450, 1886
ApaLI	GTGCAC	1 cut(s)	969
ApeKI	GCWGC	5 cut(s)	1064, 1361, 1547, 1910, 1913
ApoI	RAATTY	1 cut(s)	1046
ArsI	GACNNNNNNTTYG	2 cut(s)	578, 610
AsiGI	ACCGGT	1 cut(s)	1103
AspA2I	CCTAGG	1 cut(s)	1213
AspS9I	GGNCC	5 cut(s)	88, 981, 1087, 1295, 1320
AsuC2I	CCSGG	3 cut(s)	85, 86, 1032
AsuHPI	GGTGA	7 cut(s)	118, 154, 302, 359, 428, 701, 707
AvaI	CYCGRG	3 cut(s)	84, 813, 1604
AvaII	GGWCC	2 cut(s)	1087, 1295
AvrII	CCTAGG	1 cut(s)	1213
BaeGI	GKGCMC	1 cut(s)	973
BaeI	ACNNNNGTAYC	2 cut(s)	1483, 1516
BanII	GRGCYC	2 cut(s)	1561, 1605
BauI	CACGAG	1 cut(s)	553
BbsI	GAAGAC	1 cut(s)	60
Bbv12I	GWGCWC	3 cut(s)	973, 1561, 1605
BbvCI	CCTCAGC	1 cut(s)	387
BbvI	GCAGC	5 cut(s)	1076, 1348, 1534, 1922, 1925
BccI	CCATC	5 cut(s)	107, 431, 692, 1231, 1425
BcgI	CGANNNNNNTGC	2 cut(s)	82, 116
BciT130I	CCWGG	6 cut(s)	312, 904, 1010, 1092, 1154, 1299
BcnI	CCSGG	3 cut(s)	85, 86, 1032
BcoDI	GTCTC	4 cut(s)	143, 279, 579, 715
BcuI	ACTAGT	2 cut(s)	233, 1723
BfaI	CTAG	4 cut(s)	234, 1214, 1724, 1880
BfmI	CTRYAG	1 cut(s)	1347
BfuAI	ACCTGC	2 cut(s)	649, 739
BglI	GCCNNNNNGGC	1 cut(s)	1449
BlnI	CCTAGG	1 cut(s)	1213
BlpI	GCTNAGC	1 cut(s)	1242
BmcAI	AGTACT	1 cut(s)	1421
Bme1390I	CCNGG	9 cut(s)	85, 86, 312, 904, 1010, 1032, 1092, 1154, 1299
Bme18I	GGWCC	2 cut(s)	1087, 1295
BmeT110I	CYCGRG	3 cut(s)	84, 813, 1604
BmgBI	CACGTC	1 cut(s)	46
BmgT120I	GGNCC	5 cut(s)	88, 981, 1087, 1295, 1320
BmiI	GGNNCC	5 cut(s)	30, 89, 1015, 1089, 1305
BmrFI	CCNGG	9 cut(s)	85, 86, 312, 904, 1010, 1032, 1092, 1154, 1299
BmrI	ACTGGG	1 cut(s)	1432
BmsI	GCATC	2 cut(s)	879, 1091
BmuI	ACTGGG	1 cut(s)	1432
BoxI	GACNNNNGTC	1 cut(s)	135
BpiI	GAAGAC	1 cut(s)	60
BpmI	CTGGAG	2 cut(s)	1136, 1547
Bpu10I	CCTNAGC	1 cut(s)	387
Bpu1102I	GCTNAGC	1 cut(s)	1242
BpuMI	CCSGG	3 cut(s)	85, 86, 1032
BsaAI	YACGTR	2 cut(s)	1142, 1310
BsaHI	GRCGYC	1 cut(s)	180
BsaWI	WCCGGW	2 cut(s)	220, 1103
BsaXI	ACNNNNNCTCC	8 cut(s)	140, 167, 170, 170, 197, 200, 810, 840
Bsc4I	CCNNNNNNNGG	6 cut(s)	84, 85, 790, 929, 1010, 1662
Bse118I	RCCGGY	1 cut(s)	1103
Bse1I	ACTGG	6 cut(s)	711, 1385, 1427, 1453, 1656, 1742
Bse3DI	GCAATG	3 cut(s)	758, 1470, 1781
BseBI	CCWGG	6 cut(s)	312, 904, 1010, 1092, 1154, 1299
BseGI	GGATG	6 cut(s)	577, 588, 894, 1231, 1242, 1282
BseLI	CCNNNNNNNGG	6 cut(s)	84, 85, 790, 929, 1010, 1662
BseMI	GCAATG	3 cut(s)	758, 1470, 1781
BseMII	CTCAG	7 cut(s)	154, 378, 515, 979, 1233, 1665, 1761
BseNI	ACTGG	6 cut(s)	711, 1385, 1427, 1453, 1656, 1742
BseRI	GAGGAG	7 cut(s)	175, 178, 404, 831, 1179, 1278, 1797
BseSI	GKGCMC	1 cut(s)	973
BseX3I	CGGCCG	1 cut(s)	103
BseXI	GCAGC	5 cut(s)	1076, 1348, 1534, 1922, 1925
BsgI	GTGCAG	1 cut(s)	1083
Bsh1236I	CGCG	2 cut(s)	986, 1891
Bsh1285I	CGRYCG	1 cut(s)	106
BshFI	GGCC	7 cut(s)	90, 105, 794, 982, 1321, 1452, 1888
BshTI	ACCGGT	1 cut(s)	1103
BsiEI	CGRYCG	1 cut(s)	106
BsiHKAI	GWGCWC	3 cut(s)	973, 1561, 1605
BsiHKCI	CYCGRG	3 cut(s)	84, 813, 1604
BsiSI	CCGG	4 cut(s)	85, 221, 1032, 1104
BslFI	GGGAC	4 cut(s)	442, 790, 1073, 1140
BslI	CCNNNNNNNGG	6 cut(s)	84, 85, 790, 929, 1010, 1662
BsmAI	GTCTC	4 cut(s)	143, 279, 579, 715
BsmBI	CGTCTC	2 cut(s)	143, 279
BsmFI	GGGAC	4 cut(s)	442, 790, 1073, 1140
BsnI	GGCC	7 cut(s)	90, 105, 794, 982, 1321, 1452, 1888
BsoBI	CYCGRG	3 cut(s)	84, 813, 1604
Bsp1286I	GDGCHC	3 cut(s)	973, 1561, 1605
Bsp143I	GATC	2 cut(s)	1587, 1846
Bsp1720I	GCTNAGC	1 cut(s)	1242
BspANI	GGCC	7 cut(s)	90, 105, 794, 982, 1321, 1452, 1888
BspCNI	CTCAG	7 cut(s)	153, 379, 514, 978, 1234, 1666, 1762
BspFNI	CGCG	2 cut(s)	986, 1891
BspLI	GGNNCC	5 cut(s)	30, 89, 1015, 1089, 1305
BspMI	ACCTGC	2 cut(s)	649, 739
BspPI	GGATC	2 cut(s)	1582, 1854
BsrBI	CCGCTC	1 cut(s)	197
BsrDI	GCAATG	3 cut(s)	758, 1470, 1781
BsrFI	RCCGGY	1 cut(s)	1103
BsrI	ACTGG	6 cut(s)	711, 1385, 1427, 1453, 1656, 1742
BssAI	RCCGGY	1 cut(s)	1103
BssMI	GATC	2 cut(s)	1587, 1846
BssNI	GRCGYC	1 cut(s)	180
BssSI	CACGAG	1 cut(s)	553
BssT1I	CCWWGG	2 cut(s)	1213, 1835
Bst2BI	CACGAG	1 cut(s)	553
Bst2UI	CCWGG	6 cut(s)	312, 904, 1010, 1092, 1154, 1299
Bst4CI	ACNGT	5 cut(s)	290, 540, 655, 1147, 1327
Bst6I	CTCTTC	3 cut(s)	356, 372, 713
BstACI	GRCGYC	1 cut(s)	180
BstAPI	GCANNNNNTGC	1 cut(s)	532
BstBAI	YACGTR	2 cut(s)	1142, 1310
BstC8I	GCNNGC	3 cut(s)	984, 1248, 1441
BstDEI	CTNAG	9 cut(s)	140, 357, 387, 501, 965, 1242, 1538, 1674, 1770
BstDSI	CCRYGG	2 cut(s)	536, 1889
BstF5I	GGATG	6 cut(s)	577, 588, 894, 1231, 1242, 1282
BstFNI	CGCG	2 cut(s)	986, 1891
BstKTI	GATC	2 cut(s)	1590, 1849
BstMAI	GTCTC	4 cut(s)	143, 279, 579, 715
BstMBI	GATC	2 cut(s)	1587, 1846
BstMCI	CGRYCG	1 cut(s)	106
BstMWI	GCNNNNNNNGC	9 cut(s)	179, 532, 1247, 1370, 1449, 1556, 1609, 1618, 1900
BstNI	CCWGG	6 cut(s)	312, 904, 1010, 1092, 1154, 1299
BstNSI	RCATGY	1 cut(s)	674
BstPAI	GACNNNNGTC	1 cut(s)	135
BstSCI	CCNGG	9 cut(s)	83, 84, 310, 902, 1008, 1030, 1090, 1152, 1297
BstSFI	CTRYAG	1 cut(s)	1347
BstSLI	GKGCMC	1 cut(s)	973
BstSNI	TACGTA	1 cut(s)	1142
BstUI	CGCG	2 cut(s)	986, 1891
BstV1I	GCAGC	5 cut(s)	1076, 1348, 1534, 1922, 1925
BstV2I	GAAGAC	1 cut(s)	60
BstXI	CCANNNNNNTGG	1 cut(s)	616
BstZI	CGGCCG	1 cut(s)	103
BsuRI	GGCC	7 cut(s)	90, 105, 794, 982, 1321, 1452, 1888
BtgI	CCRYGG	2 cut(s)	536, 1889
BtrI	CACGTC	1 cut(s)	46
BtsCI	GGATG	6 cut(s)	577, 588, 894, 1231, 1242, 1282
BtsI	GCAGTG	2 cut(s)	1066, 1074
BtsIMutI	CAGTG	6 cut(s)	704, 971, 973, 1066, 1074, 1446
BveI	ACCTGC	2 cut(s)	649, 739
Cac8I	GCNNGC	3 cut(s)	984, 1248, 1441
Cfr10I	RCCGGY	1 cut(s)	1103
Cfr13I	GGNCC	5 cut(s)	88, 981, 1087, 1295, 1320
Cfr42I	CCGCGG	1 cut(s)	1892
Cfr9I	CCCGGG	1 cut(s)	84
CseI	GACGC	3 cut(s)	65, 125, 188
Csp6I	GTAC	6 cut(s)	702, 833, 1143, 1161, 1420, 1653
CspAI	ACCGGT	1 cut(s)	1103
CspCI	CAANNNNNGTGG	6 cut(s)	657, 692, 866, 901, 916, 951
CviAII	CATG	7 cut(s)	616, 671, 686, 796, 1114, 1551, 1842
CviQI	GTAC	6 cut(s)	702, 833, 1143, 1161, 1420, 1653
DdeI	CTNAG	9 cut(s)	140, 357, 387, 501, 965, 1242, 1538, 1674, 1770
DpnI	GATC	2 cut(s)	1589, 1848
DpnII	GATC	2 cut(s)	1587, 1846
EaeI	YGGCCR	3 cut(s)	103, 1450, 1886
EagI	CGGCCG	1 cut(s)	103
Eam1104I	CTCTTC	3 cut(s)	356, 372, 713
EarI	CTCTTC	3 cut(s)	356, 372, 713
EciI	GGCGGA	2 cut(s)	103, 181
Ecl136II	GAGCTC	2 cut(s)	1559, 1603
EclXI	CGGCCG	1 cut(s)	103
Eco105I	TACGTA	1 cut(s)	1142
Eco130I	CCWWGG	2 cut(s)	1213, 1835
Eco24I	GRGCYC	2 cut(s)	1561, 1605
Eco32I	GATATC	2 cut(s)	1097, 1336
Eco47I	GGWCC	2 cut(s)	1087, 1295
Eco52I	CGGCCG	1 cut(s)	103
Eco53kI	GAGCTC	2 cut(s)	1559, 1603
Eco57I	CTGAAG	2 cut(s)	396, 995
Eco88I	CYCGRG	3 cut(s)	84, 813, 1604
EcoICRI	GAGCTC	2 cut(s)	1559, 1603
EcoRII	CCWGG	6 cut(s)	310, 902, 1008, 1090, 1152, 1297
EcoRV	GATATC	2 cut(s)	1097, 1336
EcoT14I	CCWWGG	2 cut(s)	1213, 1835
EcoT38I	GRGCYC	2 cut(s)	1561, 1605
ErhI	CCWWGG	2 cut(s)	1213, 1835
Esp3I	CGTCTC	2 cut(s)	143, 279
FaeI	CATG	7 cut(s)	619, 674, 689, 799, 1117, 1554, 1845
FaqI	GGGAC	4 cut(s)	442, 790, 1073, 1140
FatI	CATG	7 cut(s)	615, 670, 685, 795, 1113, 1550, 1841
FauI	CCCGC	1 cut(s)	991
FokI	GGATG	6 cut(s)	575, 584, 901, 1238, 1249, 1289
FriOI	GRGCYC	2 cut(s)	1561, 1605
FspBI	CTAG	4 cut(s)	234, 1214, 1724, 1880
GsuI	CTGGAG	2 cut(s)	1136, 1547
HaeIII	GGCC	7 cut(s)	90, 105, 794, 982, 1321, 1452, 1888
HapII	CCGG	4 cut(s)	85, 221, 1032, 1104
HgaI	GACGC	3 cut(s)	65, 125, 188
Hin1I	GRCGYC	1 cut(s)	180
Hin1II	CATG	7 cut(s)	619, 674, 689, 799, 1117, 1554, 1845
HincII	GTYRAC	1 cut(s)	622
HindII	GTYRAC	1 cut(s)	622
HpaII	CCGG	4 cut(s)	85, 221, 1032, 1104
HphI	GGTGA	7 cut(s)	118, 154, 302, 359, 428, 701, 707
Hpy166II	GTNNAC	4 cut(s)	622, 704, 971, 1161
Hpy188III	TCNNGA	7 cut(s)	284, 485, 1042, 1411, 1564, 1641, 1929
Hpy8I	GTNNAC	4 cut(s)	622, 704, 971, 1161
Hpy99I	CGWCG	1 cut(s)	182
HpyAV	CCTTC	6 cut(s)	20, 129, 376, 419, 1027, 1429
HpyCH4III	ACNGT	5 cut(s)	290, 540, 655, 1147, 1327
HpyCH4IV	ACGT	5 cut(s)	45, 506, 1141, 1309, 1869
HpyF10VI	GCNNNNNNNGC	9 cut(s)	179, 532, 1247, 1370, 1449, 1556, 1609, 1618, 1900
HpyF3I	CTNAG	9 cut(s)	140, 357, 387, 501, 965, 1242, 1538, 1674, 1770
HpySE526I	ACGT	5 cut(s)	45, 506, 1141, 1309, 1869
Hsp92I	GRCGYC	1 cut(s)	180
Hsp92II	CATG	7 cut(s)	619, 674, 689, 799, 1117, 1554, 1845
KspI	CCGCGG	1 cut(s)	1892
Kzo9I	GATC	2 cut(s)	1587, 1846
LmnI	GCTCC	3 cut(s)	213, 1303, 1556
Lsp1109I	GCAGC	5 cut(s)	1076, 1348, 1534, 1922, 1925
LweI	GCATC	2 cut(s)	879, 1091
MaeI	CTAG	4 cut(s)	234, 1214, 1724, 1880
MaeII	ACGT	5 cut(s)	45, 506, 1141, 1309, 1869
MaeIII	GTNAC	4 cut(s)	229, 274, 1106, 1726
MalI	GATC	2 cut(s)	1589, 1848
MbiI	CCGCTC	1 cut(s)	197
MboI	GATC	2 cut(s)	1587, 1846
MboII	GAAGA	6 cut(s)	65, 373, 389, 730, 1343, 1426
MfeI	CAATTG	1 cut(s)	1580
MhlI	GDGCHC	3 cut(s)	973, 1561, 1605
MluCI	AATT	9 cut(s)	254, 610, 736, 997, 1046, 1077, 1573, 1580, 1706
MlyI	GAGTC	4 cut(s)	401, 406, 1723, 1754
MmeI	TCCRAC	1 cut(s)	674
MseI	TTAA	4 cut(s)	411, 848, 953, 996
MslI	CAYNNNNRTG	1 cut(s)	976
MspA1I	CMGCKG	4 cut(s)	173, 1455, 1891, 1903
MspI	CCGG	4 cut(s)	85, 221, 1032, 1104
MspR9I	CCNGG	9 cut(s)	85, 86, 312, 904, 1010, 1032, 1092, 1154, 1299
MunI	CAATTG	1 cut(s)	1580
MvaI	CCWGG	6 cut(s)	312, 904, 1010, 1092, 1154, 1299
MvnI	CGCG	2 cut(s)	986, 1891
MwoI	GCNNNNNNNGC	9 cut(s)	179, 532, 1247, 1370, 1449, 1556, 1609, 1618, 1900
NciI	CCSGG	3 cut(s)	85, 86, 1032
NdeII	GATC	2 cut(s)	1587, 1846
NlaIII	CATG	7 cut(s)	619, 674, 689, 799, 1117, 1554, 1845
NlaIV	GGNNCC	5 cut(s)	30, 89, 1015, 1089, 1305
NmuCI	GTSAC	2 cut(s)	274, 1726
NspI	RCATGY	1 cut(s)	674
OliI	CACNNNNGTG	1 cut(s)	976
PaeR7I	CTCGAG	1 cut(s)	813
PasI	CCCWGGG	1 cut(s)	1009
PciI	ACATGT	1 cut(s)	670
PfeI	GAWTC	7 cut(s)	280, 307, 353, 577, 742, 1700, 1925
PfoI	TCCNGGA	2 cut(s)	1030, 1152
PinAI	ACCGGT	1 cut(s)	1103
PleI	GAGTC	4 cut(s)	400, 405, 1723, 1754
PpsI	GAGTC	4 cut(s)	400, 405, 1723, 1754
Ppu21I	YACGTR	2 cut(s)	1142, 1310
PscI	ACATGT	1 cut(s)	670
PshAI	GACNNNNGTC	1 cut(s)	135
Psp124BI	GAGCTC	2 cut(s)	1561, 1605
Psp6I	CCWGG	6 cut(s)	310, 902, 1008, 1090, 1152, 1297
PspGI	CCWGG	6 cut(s)	310, 902, 1008, 1090, 1152, 1297
PspN4I	GGNNCC	5 cut(s)	30, 89, 1015, 1089, 1305
PspPI	GGNCC	5 cut(s)	88, 981, 1087, 1295, 1320
PspXI	VCTCGAGB	1 cut(s)	813
PsrI	GAACNNNNNNTAC	2 cut(s)	666, 698
PvuII	CAGCTG	1 cut(s)	1903
RsaI	GTAC	6 cut(s)	703, 834, 1144, 1162, 1421, 1654
RsaNI	GTAC	6 cut(s)	702, 833, 1143, 1161, 1420, 1653
RseI	CAYNNNNRTG	1 cut(s)	976
SacI	GAGCTC	2 cut(s)	1561, 1605
SacII	CCGCGG	1 cut(s)	1892
SaqAI	TTAA	4 cut(s)	411, 848, 953, 996
Sau3AI	GATC	2 cut(s)	1587, 1846
Sau96I	GGNCC	5 cut(s)	88, 981, 1087, 1295, 1320
ScaI	AGTACT	1 cut(s)	1421
SchI	GAGTC	4 cut(s)	401, 406, 1723, 1754
ScrFI	CCNGG	9 cut(s)	85, 86, 312, 904, 1010, 1032, 1092, 1154, 1299
SduI	GDGCHC	3 cut(s)	973, 1561, 1605
SfaNI	GCATC	2 cut(s)	879, 1091
SfcI	CTRYAG	1 cut(s)	1347
Sfr274I	CTCGAG	1 cut(s)	813
Sfr303I	CCGCGG	1 cut(s)	1892
SgrBI	CCGCGG	1 cut(s)	1892
SinI	GGWCC	2 cut(s)	1087, 1295
SlaI	CTCGAG	1 cut(s)	813
SmaI	CCCGGG	1 cut(s)	86
SmiMI	CAYNNNNRTG	1 cut(s)	976
SmlI	CTYRAG	1 cut(s)	813
SmoI	CTYRAG	1 cut(s)	813
SnaBI	TACGTA	1 cut(s)	1142
SpeI	ACTAGT	2 cut(s)	233, 1723
Sse9I	AATT	9 cut(s)	254, 610, 736, 997, 1046, 1077, 1573, 1580, 1706
SspI	AATATT	1 cut(s)	852
SspMI	CTAG	4 cut(s)	234, 1214, 1724, 1880
SstI	GAGCTC	2 cut(s)	1561, 1605
StyD4I	CCNGG	9 cut(s)	83, 84, 310, 902, 1008, 1030, 1090, 1152, 1297
StyI	CCWWGG	2 cut(s)	1213, 1835
TaaI	ACNGT	5 cut(s)	290, 540, 655, 1147, 1327
TaiI	ACGT	5 cut(s)	48, 509, 1144, 1312, 1872
TaqI	TCGA	6 cut(s)	283, 395, 400, 814, 1050, 1489
TaqII	GACCGA	1 cut(s)	1075
TasI	AATT	9 cut(s)	254, 610, 736, 997, 1046, 1077, 1573, 1580, 1706
TatI	WGTACW	2 cut(s)	1160, 1419
TauI	GCSGC	9 cut(s)	93, 108, 147, 170, 173, 197, 1455, 1891, 1894
TfiI	GAWTC	7 cut(s)	280, 307, 353, 577, 742, 1700, 1925
Tru1I	TTAA	4 cut(s)	411, 848, 953, 996
Tru9I	TTAA	4 cut(s)	411, 848, 953, 996
TscAI	CASTG	6 cut(s)	711, 973, 978, 1066, 1074, 1453
TseFI	GTSAC	2 cut(s)	274, 1726
TseI	GCWGC	5 cut(s)	1064, 1361, 1547, 1910, 1913
Tsp45I	GTSAC	2 cut(s)	274, 1726
TspDTI	ATGAA	6 cut(s)	674, 731, 759, 927, 1130, 1242
TspGWI	ACGGA	1 cut(s)	1580
TspMI	CCCGGG	1 cut(s)	84
TspRI	CASTG	6 cut(s)	711, 973, 978, 1066, 1074, 1453
VneI	GTGCAC	1 cut(s)	969
VpaK11BI	GGWCC	2 cut(s)	1087, 1295
XapI	RAATTY	1 cut(s)	1046
XceI	RCATGY	1 cut(s)	674
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1314
XhoI	CTCGAG	1 cut(s)	813
XmaI	CCCGGG	1 cut(s)	84
XmaJI	CCTAGG	1 cut(s)	1213
XspI	CTAG	4 cut(s)	234, 1214, 1724, 1880
ZrmI	AGTACT	1 cut(s)	1421

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.