Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0010258

Physical Location & Seq

Genomic Coordinates Forward (+)

27947073 .. 27951659

Gene Structure 4587 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g26680.14

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2016 bp

ATGCATTCCCCAATGGATCACCGTCTGATGGGATATTTGGTTCCTCTCAATGCCAAGCTAGAAGAAGACGCTTCACTCCCAAAAATACCCCTCTCCCGAGGCCCGAATTACATCGGCCGCAACACCACCGCTTCCCTCTCCGACAAACGACTCAGCCGGAAGCACCTCGCTCTCACTATCGATGCTAGTGATTCCGCCGTTTTGGTCGTGGAGGGGACAAATCCCATTGTTGTGAAATCCGGGAGTAACAGGAAGAAATTGTTTCCGAAAGAAAATGCAACGATATGCAATGGTGATGTTATAGAGCTGATTCCGGGGCATTTTCTTTTCGAGTATAAGACATTGTCTGATAATGAAAATGGAAATAATGTGCGTGTTGTCTGTGACCATAAGAGGGGATCAAATGATGGTGGAAAGGCCGGTGAAGTTGAAGAATTGACTCGAAAGAGGCCACGTCAACTAGTGTCTCAAGATAAAGGTTCCGAAAGGAGTTTTAAGGCTGAGGTGGAAGGAAGCAGCTCGGGGGCTGATAGAGACGGTGGCAGTGTGGAGGCCATACGCCATTTTTGTGTTCCTAATGATCAATTACCACAGACCTTTCGGCTTTTGAATGTGCAAGGACTCCCCCCATGGGCAAATACCTCTTGTGTTTCTATAAGGGATTTGATTCAGGGGGACATTCTTGTTGCTATCCTTTCCAATTACATGGTAGACATCGATTGGTTGATCCCTGCATGCCCATCAATTGCCAAAGTTCCACATGTGTTGGTTATTCATGGTGAGGGTGATGGTACACTGGATTACATGAAGAGAAAGAAGCCTGCGAACTGGATTCTACACAAACCACCATTGCCCATTTCATTTGGTACACACCATTCAAAGGCCATGATTCTTGTTTACCCTCGAGGAGTGAGAATCATTGTACATACAGCAAACTATATACATGTTGACTGGAACAACAAAAGCCAAGGTTTGTGGATGCAGGACTTTCCCTGGAAAGATCAAAATAATCCAAGCAAAGGATGTGGATTCGAAAGTGACTTAATCGATTATCTCAGTGCACTTAAGTGGCCTGAGTTTTCAGTTAATTTTCCTAATCTGGGTAGCTTCAAGATCAATCCATCATTTTTCAAGAAGTTTGATTACAGTGATGCAGCAGTGAGGCTAATTGCATCTGTCCCTGGATATCATACGGGTAATAACATGAAAAAGTGGGGGCATATGAAGCTTCGCACTGTTCTTCAGGAGTGTATTTTTGATAAAGAGTTTCGGAAATCTCCTCTTGCTTATCAGTTCTCCTCCCTGGGTTCTTTGGACGAGAAGTGGATGGCTGAGTTTATGTCTTCAATGTCATCAGGCTTATCGGAAGATAGAACTCCTCTCGGTCCTGGGCAGCCACTCATAATATGGCCTACAGTAGAAGATGTCAGATGCTCTTTAGAGGGCTATGCAGCTGGAAATGCCATTCCAAGTCCACTAAAGAATGTGGAGAAAGACTTCTTGAAAAAGTACTGGGCTAAATGGAGGGCAAGCCATACCGGCCGCTGTCGTGCAATGCCACATATAAAAACATTCGTGCGTTATAATGGTCAGAAACTTGCTTGGTTTTTGCTAACTTCAGCAAATCTTAGCAAGGCTGCCTGGGGCGCTCTCCAGAAGAACAACTCACAGTTGATGATCCGTTCTTATGAGCTGGGAATTCTATTTCTACCACGTAAAACATGCAGTTTTGGGTTTTCTTGTACGAGCAATGGGGTTCCATCTAAGGATAAATCTGGACGGTCAGAAACTTCTGAAGCATCGAGAACAACACTCGTGACTCTGAACTGGCAAGGAAACAGGAATACAGATTCTTCATCTGAAGTAATTAAATTGCCCGTGCCTTATGAACTCCCTCCTCAGCCATACACCGCGGAAGATGTGCCTTGGTCTTGGGACCGGCGGTATAACAAGAAAGATGTTTACGGTCAAGTTTGGCCGCGACATGTTCAGCTGTATGCTGCTCAAGACTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000012 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003697 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008081 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016787 GO:0016788 GO:0017005 GO:0033554 GO:0034641 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0070259 GO:0071704 GO:0071944 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FHA Tyr-DNA_phospho

Protein Analysis

672

Amino Acids

75.37

Weight (kDa)

9.15

Isoelectric Point (pI)

40.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010258)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15170
fragaria_vesca	FvH4_3g02650 FvH4_3g02650
malus_domestica	MD10G1314700.v1.1
prunus_persica	Prupe.4G026100_v2.0.a1 Prupe.4G026100_v2.0.a1
pyrus_communis	pycom10g26680
rosa_chinensis	RchiOBHm_Chr5g0003961
rosa_laevigata	RLG00000031190 RLG00000031192
rosa_multiflora	Rmu_sc0000547.1_g000008
rosa_roxburghii	Rroxscaffold_1G00072010
rosa_rugosa	Rorug04G0408200.1 Rorug04G0408300.1 Rorug04G0408400 Rorug04G0408500
rosa_samantha	Rh5AG036200 Rh5BG035100 Rh5CG038800 Rh5DG034700
rosa_wichuraiana	Rw5G003300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1584
AbsI	CCTCGAGG	1 cut(s)	903
AccI	GTMKAC	1 cut(s)	711
AccII	CGCG	2 cut(s)	1913, 1981
AciI	CCGC	8 cut(s)	118, 129, 195, 1543, 1911, 1913, 1942, 1979
AclWI	GGATC	4 cut(s)	24, 406, 721, 1672
AcoI	YGGCCR	3 cut(s)	115, 1540, 1976
AcsI	RAATTY	1 cut(s)	1698
AcuI	CTGAAG	4 cut(s)	1226, 1602, 1815, 1881
AfaI	GTAC	5 cut(s)	793, 868, 924, 1511, 1744
AfiI	CCNNNNNNNGG	6 cut(s)	28, 394, 631, 880, 1019, 1100
AflII	CTTAAG	1 cut(s)	1064
AflIII	ACRYGT	3 cut(s)	760, 943, 1984
AgsI	TTSAA	7 cut(s)	431, 610, 879, 1111, 1132, 1347, 1504
AhlI	ACTAGT	1 cut(s)	460
AjiI	CACGTC	1 cut(s)	455
AjnI	CCWGG	5 cut(s)	992, 1180, 1302, 1387, 1640
AleI	CACNNNNGTG	1 cut(s)	1066
AloI	GAACNNNNNNTCC	2 cut(s)	24, 56
AluBI	AGCT	8 cut(s)	58, 307, 519, 1107, 1228, 1454, 1693, 1993
AluI	AGCT	8 cut(s)	58, 307, 519, 1107, 1228, 1454, 1693, 1993
Alw21I	GWGCWC	1 cut(s)	1063
Alw26I	GTCTC	2 cut(s)	471, 528
Alw44I	GTGCAC	1 cut(s)	1059
AlwI	GGATC	4 cut(s)	24, 406, 721, 1672
Ama87I	CYCGRG	3 cut(s)	96, 520, 903
ApaLI	GTGCAC	1 cut(s)	1059
ApeKI	GCWGC	6 cut(s)	516, 1154, 1393, 1451, 1637, 2000
ApoI	RAATTY	1 cut(s)	1698
Asp700I	GAANNNNTTC	1 cut(s)	1496
AspLEI	GCGC	1 cut(s)	1649
AspS9I	GGNCC	3 cut(s)	101, 1385, 1936
AsuC2I	CCSGG	2 cut(s)	241, 315
AsuHPI	GGTGA	5 cut(s)	11, 305, 434, 791, 797
AsuII	TTCGAA	1 cut(s)	1032
AvaI	CYCGRG	3 cut(s)	96, 520, 903
AvaII	GGWCC	2 cut(s)	1385, 1936
BaeGI	GKGCMC	1 cut(s)	1063
BarI	GAAGNNNNNNTAC	2 cut(s)	1127, 1159
BauI	CACGAG	1 cut(s)	1814
BbsI	GAAGAC	2 cut(s)	72, 1335
Bbv12I	GWGCWC	1 cut(s)	1063
BbvCI	CCTCAGC	2 cut(s)	501, 1899
BbvI	GCAGC	6 cut(s)	528, 1166, 1405, 1463, 1624, 1987
BccI	CCATC	7 cut(s)	22, 401, 748, 782, 1129, 1321, 1768
BceAI	ACGGC	1 cut(s)	182
BciT130I	CCWGG	5 cut(s)	994, 1182, 1304, 1389, 1642
BclI	TGATCA	1 cut(s)	580
BcnI	CCSGG	2 cut(s)	241, 315
BcoDI	GTCTC	2 cut(s)	471, 528
BcuI	ACTAGT	1 cut(s)	460
BfaI	CTAG	3 cut(s)	59, 186, 461
BfmI	CTRYAG	1 cut(s)	1413
BfoI	RGCGCY	1 cut(s)	1650
BfrI	CTTAAG	1 cut(s)	1064
BglI	GCCNNNNNGGC	1 cut(s)	1539
BisI	GCNGC	9 cut(s)	118, 517, 1155, 1394, 1452, 1543, 1638, 1979, 2001
BlsI	GCNGC	9 cut(s)	119, 518, 1156, 1395, 1453, 1544, 1639, 1980, 2002
BmcAI	AGTACT	1 cut(s)	1511
Bme1390I	CCNGG	7 cut(s)	241, 315, 994, 1182, 1304, 1389, 1642
Bme18I	GGWCC	2 cut(s)	1385, 1936
BmeT110I	CYCGRG	3 cut(s)	96, 520, 903
BmgBI	CACGTC	1 cut(s)	455
BmgT120I	GGNCC	3 cut(s)	101, 1385, 1936
BmiI	GGNNCC	4 cut(s)	42, 481, 1758, 1937
BmrFI	CCNGG	7 cut(s)	241, 315, 994, 1182, 1304, 1389, 1642
BmrI	ACTGGG	1 cut(s)	1522
BmsI	GCATC	6 cut(s)	172, 969, 1141, 1181, 1421, 1808
BmuI	ACTGGG	1 cut(s)	1522
BpiI	GAAGAC	2 cut(s)	72, 1335
BpmI	CTGGAG	1 cut(s)	1637
Bpu10I	CCTNAGC	2 cut(s)	501, 1899
Bpu14I	TTCGAA	1 cut(s)	1032
BpuEI	CTTGAG	2 cut(s)	453, 1989
BpuMI	CCSGG	2 cut(s)	241, 315
Bsa29I	ATCGAT	3 cut(s)	180, 717, 1047
BsaAI	YACGTR	1 cut(s)	1715
Bsc4I	CCNNNNNNNGG	6 cut(s)	28, 394, 631, 880, 1019, 1100
Bse118I	RCCGGY	3 cut(s)	419, 1538, 1938
Bse1I	ACTGG	5 cut(s)	801, 833, 956, 1517, 1832
Bse3DI	GCAATG	4 cut(s)	295, 848, 1560, 1756
BseBI	CCWGG	5 cut(s)	994, 1182, 1304, 1389, 1642
BseCI	ATCGAT	3 cut(s)	180, 717, 1047
BseGI	GGATG	3 cut(s)	984, 1028, 1332
BseLI	CCNNNNNNNGG	6 cut(s)	28, 394, 631, 880, 1019, 1100
BseMI	GCAATG	4 cut(s)	295, 848, 1560, 1756
BseMII	CTCAG	6 cut(s)	166, 492, 1065, 1069, 1323, 1913
BseNI	ACTGG	5 cut(s)	801, 833, 956, 1517, 1832
BseRI	GAGGAG	5 cut(s)	921, 1269, 1288, 1368, 1887
BseSI	GKGCMC	1 cut(s)	1063
BseX3I	CGGCCG	2 cut(s)	115, 1540
BseXI	GCAGC	6 cut(s)	528, 1166, 1405, 1463, 1624, 1987
BseYI	CCCAGC	1 cut(s)	1693
Bsh1236I	CGCG	2 cut(s)	1913, 1981
Bsh1285I	CGRYCG	2 cut(s)	118, 1543
BshVI	ATCGAT	3 cut(s)	180, 717, 1047
BsiEI	CGRYCG	2 cut(s)	118, 1543
BsiHKAI	GWGCWC	1 cut(s)	1063
BsiHKCI	CYCGRG	3 cut(s)	96, 520, 903
BsiSI	CCGG	6 cut(s)	157, 240, 314, 420, 1539, 1939
BslFI	GGGAC	4 cut(s)	229, 689, 1163, 1949
BslI	CCNNNNNNNGG	6 cut(s)	28, 394, 631, 880, 1019, 1100
BsmAI	GTCTC	2 cut(s)	471, 528
BsmBI	CGTCTC	1 cut(s)	528
BsmFI	GGGAC	4 cut(s)	229, 689, 1163, 1949
BsmI	GAATGC	1 cut(s)	4
BsoBI	CYCGRG	3 cut(s)	96, 520, 903
Bsp119I	TTCGAA	1 cut(s)	1032
Bsp1286I	GDGCHC	1 cut(s)	1063
Bsp1407I	TGTACA	1 cut(s)	922
Bsp143I	GATC	7 cut(s)	16, 398, 580, 726, 1000, 1113, 1677
Bsp19I	CCATGG	1 cut(s)	629
BspACI	CCGC	8 cut(s)	118, 129, 195, 1543, 1911, 1913, 1942, 1979
BspCNI	CTCAG	6 cut(s)	165, 493, 1066, 1068, 1324, 1912
BspDI	ATCGAT	3 cut(s)	180, 717, 1047
BspFNI	CGCG	2 cut(s)	1913, 1981
BspLI	GGNNCC	4 cut(s)	42, 481, 1758, 1937
BspPI	GGATC	4 cut(s)	24, 406, 721, 1672
BspT104I	TTCGAA	1 cut(s)	1032
BspTI	CTTAAG	1 cut(s)	1064
BsrDI	GCAATG	4 cut(s)	295, 848, 1560, 1756
BsrFI	RCCGGY	3 cut(s)	419, 1538, 1938
BsrGI	TGTACA	1 cut(s)	922
BsrI	ACTGG	5 cut(s)	801, 833, 956, 1517, 1832
BssAI	RCCGGY	3 cut(s)	419, 1538, 1938
BssMI	GATC	7 cut(s)	16, 398, 580, 726, 1000, 1113, 1677
BssSI	CACGAG	1 cut(s)	1814
BssT1I	CCWWGG	3 cut(s)	629, 967, 1925
Bst2BI	CACGAG	1 cut(s)	1814
Bst2UI	CCWGG	5 cut(s)	994, 1182, 1304, 1389, 1642
Bst4CI	ACNGT	8 cut(s)	23, 539, 1148, 1237, 1417, 1671, 1782, 1967
Bst6I	CTCTTC	1 cut(s)	803
BstAFI	CTTAAG	1 cut(s)	1064
BstAUI	TGTACA	1 cut(s)	922
BstBAI	YACGTR	1 cut(s)	1715
BstBI	TTCGAA	1 cut(s)	1032
BstC8I	GCNNGC	3 cut(s)	736, 822, 1531
BstDEI	CTNAG	8 cut(s)	152, 501, 1055, 1074, 1332, 1628, 1764, 1899
BstDSI	CCRYGG	2 cut(s)	629, 1911
BstF5I	GGATG	3 cut(s)	984, 1028, 1332
BstFNI	CGCG	2 cut(s)	1913, 1981
BstH2I	RGCGCY	1 cut(s)	1650
BstHHI	GCGC	1 cut(s)	1649
BstKTI	GATC	7 cut(s)	19, 401, 583, 729, 1003, 1116, 1680
BstMAI	GTCTC	2 cut(s)	471, 528
BstMBI	GATC	7 cut(s)	16, 398, 580, 726, 1000, 1113, 1677
BstMCI	CGRYCG	2 cut(s)	118, 1543
BstMWI	GCNNNNNNNGC	4 cut(s)	1225, 1460, 1539, 1646
BstNI	CCWGG	5 cut(s)	994, 1182, 1304, 1389, 1642
BstNSI	RCATGY	5 cut(s)	738, 764, 947, 1725, 1988
BstSCI	CCNGG	7 cut(s)	239, 313, 992, 1180, 1302, 1387, 1640
BstSFI	CTRYAG	1 cut(s)	1413
BstSLI	GKGCMC	1 cut(s)	1063
BstUI	CGCG	2 cut(s)	1913, 1981
BstV1I	GCAGC	6 cut(s)	528, 1166, 1405, 1463, 1624, 1987
BstV2I	GAAGAC	2 cut(s)	72, 1335
BstXI	CCANNNNNNTGG	1 cut(s)	706
BstZI	CGGCCG	2 cut(s)	115, 1540
Bsu15I	ATCGAT	3 cut(s)	180, 717, 1047
BsuTUI	ATCGAT	3 cut(s)	180, 717, 1047
BtgI	CCRYGG	2 cut(s)	629, 1911
BtrI	CACGTC	1 cut(s)	455
BtsCI	GGATG	3 cut(s)	984, 1028, 1332
BtsI	GCAGTG	2 cut(s)	550, 1164
BtsIMutI	CAGTG	6 cut(s)	550, 794, 1063, 1153, 1164, 1233
Cac8I	GCNNGC	3 cut(s)	736, 822, 1531
CfoI	GCGC	1 cut(s)	1649
Cfr10I	RCCGGY	3 cut(s)	419, 1538, 1938
Cfr13I	GGNCC	3 cut(s)	101, 1385, 1936
Cfr42I	CCGCGG	1 cut(s)	1914
ClaI	ATCGAT	3 cut(s)	180, 717, 1047
CseI	GACGC	1 cut(s)	77
Csp6I	GTAC	5 cut(s)	792, 867, 923, 1510, 1743
CspCI	CAANNNNNGTGG	6 cut(s)	747, 782, 956, 991, 1006, 1041
CviQI	GTAC	5 cut(s)	792, 867, 923, 1510, 1743
DdeI	CTNAG	8 cut(s)	152, 501, 1055, 1074, 1332, 1628, 1764, 1899
DpnI	GATC	7 cut(s)	18, 400, 582, 728, 1002, 1115, 1679
DpnII	GATC	7 cut(s)	16, 398, 580, 726, 1000, 1113, 1677
EaeI	YGGCCR	3 cut(s)	115, 1540, 1976
EagI	CGGCCG	2 cut(s)	115, 1540
Eam1104I	CTCTTC	1 cut(s)	803
EarI	CTCTTC	1 cut(s)	803
EciI	GGCGGA	1 cut(s)	184
EclXI	CGGCCG	2 cut(s)	115, 1540
Eco130I	CCWWGG	3 cut(s)	629, 967, 1925
Eco32I	GATATC	1 cut(s)	1187
Eco47I	GGWCC	2 cut(s)	1385, 1936
Eco52I	CGGCCG	2 cut(s)	115, 1540
Eco57I	CTGAAG	4 cut(s)	1226, 1602, 1815, 1881
Eco88I	CYCGRG	3 cut(s)	96, 520, 903
EcoRI	GAATTC	1 cut(s)	1698
EcoRII	CCWGG	5 cut(s)	992, 1180, 1302, 1387, 1640
EcoRV	GATATC	1 cut(s)	1187
EcoT14I	CCWWGG	3 cut(s)	629, 967, 1925
EcoT22I	ATGCAT	1 cut(s)	6
ErhI	CCWWGG	3 cut(s)	629, 967, 1925
Esp3I	CGTCTC	1 cut(s)	528
FaqI	GGGAC	4 cut(s)	229, 689, 1163, 1949
FauNDI	CATATG	1 cut(s)	1221
FbaI	TGATCA	1 cut(s)	580
FblI	GTMKAC	1 cut(s)	711
Fnu4HI	GCNGC	9 cut(s)	118, 517, 1155, 1394, 1452, 1543, 1638, 1979, 2001
FokI	GGATG	3 cut(s)	991, 1035, 1339
Fsp4HI	GCNGC	9 cut(s)	118, 517, 1155, 1394, 1452, 1543, 1638, 1979, 2001
FspBI	CTAG	3 cut(s)	59, 186, 461
GlaI	GCGC	1 cut(s)	1648
GluI	GCNGC	9 cut(s)	118, 517, 1155, 1394, 1452, 1543, 1638, 1979, 2001
GsaI	CCCAGC	1 cut(s)	1697
GsuI	CTGGAG	1 cut(s)	1637
HaeII	RGCGCY	1 cut(s)	1650
HapII	CCGG	6 cut(s)	157, 240, 314, 420, 1539, 1939
HgaI	GACGC	1 cut(s)	77
HhaI	GCGC	1 cut(s)	1649
Hin6I	GCGC	1 cut(s)	1647
HinP1I	GCGC	1 cut(s)	1647
HincII	GTYRAC	2 cut(s)	458, 949
HindII	GTYRAC	2 cut(s)	458, 949
HindIII	AAGCTT	1 cut(s)	1226
HpaII	CCGG	6 cut(s)	157, 240, 314, 420, 1539, 1939
HphI	GGTGA	5 cut(s)	11, 305, 434, 791, 797
Hpy166II	GTNNAC	9 cut(s)	458, 712, 794, 869, 898, 949, 1061, 1475, 1963
Hpy8I	GTNNAC	9 cut(s)	458, 712, 794, 869, 898, 949, 1061, 1475, 1963
HpyAV	CCTTC	1 cut(s)	503
HpyCH4III	ACNGT	8 cut(s)	23, 539, 1148, 1237, 1417, 1671, 1782, 1967
HpyCH4IV	ACGT	2 cut(s)	454, 1714
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1225, 1460, 1539, 1646
HpyF3I	CTNAG	8 cut(s)	152, 501, 1055, 1074, 1332, 1628, 1764, 1899
HpySE526I	ACGT	2 cut(s)	454, 1714
HspAI	GCGC	1 cut(s)	1647
Ksp22I	TGATCA	1 cut(s)	580
KspI	CCGCGG	1 cut(s)	1914
Kzo9I	GATC	7 cut(s)	16, 398, 580, 726, 1000, 1113, 1677
Lsp1109I	GCAGC	6 cut(s)	528, 1166, 1405, 1463, 1624, 1987
LweI	GCATC	6 cut(s)	172, 969, 1141, 1181, 1421, 1808
MaeI	CTAG	3 cut(s)	59, 186, 461
MaeII	ACGT	2 cut(s)	454, 1714
MaeIII	GTNAC	4 cut(s)	245, 383, 1037, 1816
MalI	GATC	7 cut(s)	18, 400, 582, 728, 1002, 1115, 1679
MboI	GATC	7 cut(s)	16, 398, 580, 726, 1000, 1113, 1677
MfeI	CAATTG	1 cut(s)	744
MhlI	GDGCHC	1 cut(s)	1063
MlyI	GAGTC	5 cut(s)	144, 433, 615, 1813, 2003
MmeI	TCCRAC	1 cut(s)	165
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	1 cut(s)	1496
MseI	TTAA	5 cut(s)	495, 1043, 1065, 1086, 1869
MslI	CAYNNNNRTG	3 cut(s)	230, 567, 1066
MspA1I	CMGCKG	4 cut(s)	1454, 1545, 1913, 1993
MspCI	CTTAAG	1 cut(s)	1064
MspI	CCGG	6 cut(s)	157, 240, 314, 420, 1539, 1939
MspR9I	CCNGG	7 cut(s)	241, 315, 994, 1182, 1304, 1389, 1642
MunI	CAATTG	1 cut(s)	744
Mva1269I	GAATGC	1 cut(s)	4
MvaI	CCWGG	5 cut(s)	994, 1182, 1304, 1389, 1642
MvnI	CGCG	2 cut(s)	1913, 1981
MwoI	GCNNNNNNNGC	4 cut(s)	1225, 1460, 1539, 1646
NciI	CCSGG	2 cut(s)	241, 315
NcoI	CCATGG	1 cut(s)	629
NdeI	CATATG	1 cut(s)	1221
NdeII	GATC	7 cut(s)	16, 398, 580, 726, 1000, 1113, 1677
NlaIV	GGNNCC	4 cut(s)	42, 481, 1758, 1937
NmuCI	GTSAC	3 cut(s)	383, 1037, 1816
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	5 cut(s)	738, 764, 947, 1725, 1988
NspV	TTCGAA	1 cut(s)	1032
OliI	CACNNNNGTG	1 cut(s)	1066
PaeI	GCATGC	1 cut(s)	738
PaeR7I	CTCGAG	1 cut(s)	903
PasI	CCCWGGG	1 cut(s)	1303
PciI	ACATGT	3 cut(s)	760, 943, 1984
PctI	GAATGC	1 cut(s)	4
PdmI	GAANNNNTTC	1 cut(s)	1496
PfeI	GAWTC	8 cut(s)	191, 310, 667, 832, 889, 915, 1029, 1850
PflFI	GACNNNGTC	1 cut(s)	343
PfoI	TCCNGGA	1 cut(s)	239
PkrI	GCNGC	9 cut(s)	119, 518, 1156, 1395, 1453, 1544, 1639, 1980, 2002
PleI	GAGTC	5 cut(s)	144, 433, 615, 1813, 2003
PpsI	GAGTC	5 cut(s)	144, 433, 615, 1813, 2003
Ppu21I	YACGTR	1 cut(s)	1715
PscI	ACATGT	3 cut(s)	760, 943, 1984
PsiI	TTATAA	1 cut(s)	1584
Psp6I	CCWGG	5 cut(s)	992, 1180, 1302, 1387, 1640
PspFI	CCCAGC	1 cut(s)	1693
PspGI	CCWGG	5 cut(s)	992, 1180, 1302, 1387, 1640
PspN4I	GGNNCC	4 cut(s)	42, 481, 1758, 1937
PspPI	GGNCC	3 cut(s)	101, 1385, 1936
PspXI	VCTCGAGB	1 cut(s)	903
PsyI	GACNNNGTC	1 cut(s)	343
PvuII	CAGCTG	2 cut(s)	1454, 1993
RsaI	GTAC	5 cut(s)	793, 868, 924, 1511, 1744
RsaNI	GTAC	5 cut(s)	792, 867, 923, 1510, 1743
RseI	CAYNNNNRTG	3 cut(s)	230, 567, 1066
SacII	CCGCGG	1 cut(s)	1914
SaqAI	TTAA	5 cut(s)	495, 1043, 1065, 1086, 1869
SatI	GCNGC	9 cut(s)	118, 517, 1155, 1394, 1452, 1543, 1638, 1979, 2001
Sau3AI	GATC	7 cut(s)	16, 398, 580, 726, 1000, 1113, 1677
Sau96I	GGNCC	3 cut(s)	101, 1385, 1936
ScaI	AGTACT	1 cut(s)	1511
SchI	GAGTC	5 cut(s)	144, 433, 615, 1813, 2003
ScrFI	CCNGG	7 cut(s)	241, 315, 994, 1182, 1304, 1389, 1642
SduI	GDGCHC	1 cut(s)	1063
SfaNI	GCATC	6 cut(s)	172, 969, 1141, 1181, 1421, 1808
SfcI	CTRYAG	1 cut(s)	1413
Sfr274I	CTCGAG	1 cut(s)	903
Sfr303I	CCGCGG	1 cut(s)	1914
SfuI	TTCGAA	1 cut(s)	1032
SgrBI	CCGCGG	1 cut(s)	1914
SinI	GGWCC	2 cut(s)	1385, 1936
SlaI	CTCGAG	1 cut(s)	903
SmiMI	CAYNNNNRTG	3 cut(s)	230, 567, 1066
SmlI	CTYRAG	4 cut(s)	468, 903, 1064, 2004
SmoI	CTYRAG	4 cut(s)	468, 903, 1064, 2004
SpeI	ACTAGT	1 cut(s)	460
SphI	GCATGC	1 cut(s)	738
SsiI	CCGC	8 cut(s)	118, 129, 195, 1543, 1911, 1913, 1942, 1979
SspMI	CTAG	3 cut(s)	59, 186, 461
StyD4I	CCNGG	7 cut(s)	239, 313, 992, 1180, 1302, 1387, 1640
StyI	CCWWGG	3 cut(s)	629, 967, 1925
TaaI	ACNGT	8 cut(s)	23, 539, 1148, 1237, 1417, 1671, 1782, 1967
TaiI	ACGT	2 cut(s)	457, 1717
TaqI	TCGA	8 cut(s)	180, 330, 442, 717, 904, 1032, 1047, 1802
TaqII	GACCGA	1 cut(s)	1373
TatI	WGTACW	2 cut(s)	922, 1509
TauI	GCSGC	3 cut(s)	120, 1545, 1981
TfiI	GAWTC	8 cut(s)	191, 310, 667, 832, 889, 915, 1029, 1850
Tru1I	TTAA	5 cut(s)	495, 1043, 1065, 1086, 1869
Tru9I	TTAA	5 cut(s)	495, 1043, 1065, 1086, 1869
TscAI	CASTG	6 cut(s)	550, 801, 1063, 1153, 1164, 1240
TseFI	GTSAC	3 cut(s)	383, 1037, 1816
TseI	GCWGC	6 cut(s)	516, 1154, 1393, 1451, 1637, 2000
Tsp45I	GTSAC	3 cut(s)	383, 1037, 1816
TspDTI	ATGAA	8 cut(s)	369, 764, 821, 849, 1220, 1238, 1845, 1902
TspGWI	ACGGA	1 cut(s)	1670
TspRI	CASTG	6 cut(s)	550, 801, 1063, 1153, 1164, 1240
Tth111I	GACNNNGTC	1 cut(s)	343
Vha464I	CTTAAG	1 cut(s)	1064
VneI	GTGCAC	1 cut(s)	1059
VpaK11BI	GGWCC	2 cut(s)	1385, 1936
XapI	RAATTY	1 cut(s)	1698
XceI	RCATGY	5 cut(s)	738, 764, 947, 1725, 1988
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1404
XhoI	CTCGAG	1 cut(s)	903
XmiI	GTMKAC	1 cut(s)	711
XmnI	GAANNNNTTC	1 cut(s)	1496
XspI	CTAG	3 cut(s)	59, 186, 461
ZrmI	AGTACT	1 cut(s)	1511
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.