Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000547.1

Orthogroup ID

OG0010258

Physical Location & Seq

Genomic Coordinates Reverse (-)

27212 .. 31782

Gene Structure 4571 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000547.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

atggctgaccttctggtaggacacttggttcccttaagcaacctcgtccaagaagacgcttcaatccccaaaatacccctctcccggggccggaattccatcggccgcaactccgccccttccctcaccgacaagcgtctcagccgcaaccacctctccctcacagccgccgcggccgacgcctcctccgccgatttggtcgtggagggaagcaatccggttgtggtaactagcggaaatgataggaagaaactgtatcataaagaaagtatgacgattcgagacggtgatattatagagctgattccagggcagtatatttttcagtataggaaattgtgtggtgacagttatgagaagtgttcaaatggtgaagagaaggctgaggagtctagtcgaaaacggtcacatcagttagaatgtggagagaatggttcgaattcgaagcgttttaagggtgaggtggaagggaagagtgatgatggtggtggtcgtgtggaggcgatacggcattttcgtgttcctaatgaaaagttgccgcatacgtttcggcttttgaatgtgcaaggactgcccccgtgggcgaatacctcgtgtgtttctataaaggatgtgattcagggagacatcctttttgctgtcctttccaattacatggtagaccttgattggctgatacctgcttgtccaacaattgcaaaaatcccacatgtattggttgttcatggtgagggtgatggcacactggattatatgaagagaaagaaacctgcaaattggattctacacaaaccaccattgcctatttcatttgggacacaccactcaaaggccatgcttcttgtttatcctcgaggagtgagaataatagtacatacagcaaacttaatatttgttgattggaacaacaaaagtcaaggtttgtggatgcaagattttccctggaaagatcaaagtaatccaagcaaaggttgtggatttgaacatgacttaattgactatctcagtgcactgaagtggcctgagttttctattaatttgcctacccggggaaccttcaatataaatccaggatttttcaagaaattcgattacagcagtgcagcagtgaggctaattgcatctgtccctggatatcataccggtaataacatgaaaaagtggggacatatgaaactacgtactgttctccaggagtgtacttttgataaagagtttcggaaatctcctcttgcttatcagttctcctccctaggttctttggatgagaaatggatggctgagcttgcacattcaatgtcatcaggtttttcggatgataaaactcctctcggtcctggggagccacgtataatatggcccacagtagaagatgttagatgctctatagagggttatgctgctggaaatgctgttccaagtccagcaaagaatgtggataaagatttcttgaagaagtactgggcaagatggaaggcaagccacactggccgctgtcgtgcaatgccacatataaagacatttactcgatacagcggtcagaaacttgcttggtttttgctaacatcagcgaatcttagcaaagctgcatggggagctctccagaagaataattctcaactcatgatccgttcttatgagcttggggtgctgtttctaccgtataaaacacgaagtcctggattttcttgtaccagtaatggggttccatctgaggataaatctgaagagtcagataattcgggatcaaggagaaataaactagtgactctaaactggcaagggaacaggaacacagattcatcatctgaagtaatcacattgcctgtgccctatgaactccctcctctaccatacaccacccaagatgttccttggtcatgggaccgtcgatacaccaagaaagatgtttatggtcaagtttggccgcggcaagttcagctatatgcagcagctcttcaagattcttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000012 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003697 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008081 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016787 GO:0016788 GO:0017005 GO:0033554 GO:0034641 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0070259 GO:0071704 GO:0071944 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FHA Tyr-DNA_phospho

Protein Analysis

656

Amino Acids

73.62

Weight (kDa)

9.14

Isoelectric Point (pI)

43.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010258)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15170
fragaria_vesca	FvH4_3g02650 FvH4_3g02650
malus_domestica	MD10G1314700.v1.1
prunus_persica	Prupe.4G026100_v2.0.a1 Prupe.4G026100_v2.0.a1
pyrus_communis	pycom10g26680
rosa_chinensis	RchiOBHm_Chr5g0003961
rosa_laevigata	RLG00000031190 RLG00000031192
rosa_multiflora	Rmu_sc0000547.1_g000008
rosa_roxburghii	Rroxscaffold_1G00072010
rosa_rugosa	Rorug04G0408200.1 Rorug04G0408300.1 Rorug04G0408400 Rorug04G0408500
rosa_samantha	Rh5AG036200 Rh5BG035100 Rh5CG038800 Rh5DG034700
rosa_wichuraiana	Rw5G003300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	852
Acc36I	ACCTGC	2 cut(s)	688, 778
AccI	GTMKAC	1 cut(s)	660
AccII	CGCG	2 cut(s)	173, 1930
AclWI	GGATC	2 cut(s)	1621, 1753
AcoI	YGGCCR	4 cut(s)	103, 174, 1489, 1925
AcsI	RAATTY	3 cut(s)	94, 439, 1085
AcuI	CTGAAG	3 cut(s)	1034, 1746, 1830
AcyI	GRCGYC	1 cut(s)	180
AfaI	GTAC	5 cut(s)	873, 1183, 1201, 1460, 1693
AfiI	CCNNNNNNNGG	7 cut(s)	84, 85, 90, 829, 968, 1049, 1701
AflII	CTTAAG	1 cut(s)	34
AflIII	ACRYGT	1 cut(s)	709
AgeI	ACCGGT	1 cut(s)	1142
AgsI	TTSAA	9 cut(s)	63, 366, 559, 983, 1060, 1081, 1296, 1453, 1961
AhlI	ACTAGT	1 cut(s)	1762
AjnI	CCWGG	7 cut(s)	307, 941, 1069, 1129, 1191, 1336, 1678
AleI	CACNNNNGTG	1 cut(s)	1015
AloI	GAACNNNNNNTCC	4 cut(s)	12, 44, 1398, 1430
AluBI	AGCT	7 cut(s)	301, 1285, 1586, 1598, 1642, 1942, 1955
AluI	AGCT	7 cut(s)	301, 1285, 1586, 1598, 1642, 1942, 1955
Alw21I	GWGCWC	2 cut(s)	1012, 1600
Alw26I	GTCTC	3 cut(s)	143, 276, 618
Alw44I	GTGCAC	1 cut(s)	1008
AlwI	GGATC	2 cut(s)	1621, 1753
Ama87I	CYCGRG	3 cut(s)	84, 852, 1047
AoxI	GGCC	8 cut(s)	88, 103, 174, 831, 1019, 1358, 1489, 1925
ApaLI	GTGCAC	1 cut(s)	1008
ApeKI	GCWGC	5 cut(s)	1103, 1400, 1586, 1949, 1952
ApoI	RAATTY	3 cut(s)	94, 439, 1085
ArsI	GACNNNNNNTTYG	2 cut(s)	617, 649
AseI	ATTAAT	1 cut(s)	1035
AsiGI	ACCGGT	1 cut(s)	1142
AspA2I	CCTAGG	1 cut(s)	1252
AspS9I	GGNCC	4 cut(s)	88, 1334, 1359, 1885
AsuC2I	CCSGG	4 cut(s)	85, 86, 1048, 1049
AsuHPI	GGTGA	7 cut(s)	118, 299, 356, 383, 470, 740, 746
AsuII	TTCGAA	2 cut(s)	437, 443
AvaI	CYCGRG	3 cut(s)	84, 852, 1047
AvaII	GGWCC	2 cut(s)	1334, 1885
AvrII	CCTAGG	1 cut(s)	1252
BaeGI	GKGCMC	2 cut(s)	1012, 1833
BaeI	ACNNNNGTAYC	2 cut(s)	1522, 1555
BanII	GRGCYC	1 cut(s)	1600
BauI	CACGAG	1 cut(s)	592
BbsI	GAAGAC	1 cut(s)	60
Bbv12I	GWGCWC	2 cut(s)	1012, 1600
BbvCI	CCTCAGC	1 cut(s)	384
BbvI	GCAGC	5 cut(s)	1115, 1387, 1573, 1961, 1964
BccI	CCATC	6 cut(s)	107, 476, 731, 1270, 1464, 1717
BceAI	ACGGC	1 cut(s)	524
BcgI	CGANNNNNNTGC	2 cut(s)	530, 564
BciT130I	CCWGG	7 cut(s)	309, 943, 1071, 1131, 1193, 1338, 1680
BcnI	CCSGG	4 cut(s)	85, 86, 1048, 1049
BcoDI	GTCTC	3 cut(s)	143, 276, 618
BcuI	ACTAGT	1 cut(s)	1762
BfaI	CTAG	4 cut(s)	231, 393, 1253, 1763
BfmI	CTRYAG	1 cut(s)	1386
BfrI	CTTAAG	1 cut(s)	34
BfuAI	ACCTGC	2 cut(s)	688, 778
BglI	GCCNNNNNGGC	2 cut(s)	173, 1488
BlnI	CCTAGG	1 cut(s)	1252
BlpI	GCTNAGC	1 cut(s)	1281
BmcAI	AGTACT	1 cut(s)	1460
Bme18I	GGWCC	2 cut(s)	1334, 1885
BmeT110I	CYCGRG	3 cut(s)	84, 852, 1047
BmgT120I	GGNCC	4 cut(s)	88, 1334, 1359, 1885
BmiI	GGNNCC	6 cut(s)	30, 89, 1054, 1344, 1707, 1886
BmrI	ACTGGG	1 cut(s)	1471
BmsI	GCATC	3 cut(s)	918, 1130, 1370
BmuI	ACTGGG	1 cut(s)	1471
BoxI	GACNNNNGTC	1 cut(s)	135
BpiI	GAAGAC	1 cut(s)	60
BpmI	CTGGAG	2 cut(s)	1175, 1586
Bpu10I	CCTNAGC	1 cut(s)	384
Bpu1102I	GCTNAGC	1 cut(s)	1281
Bpu14I	TTCGAA	2 cut(s)	437, 443
BpuMI	CCSGG	4 cut(s)	85, 86, 1048, 1049
BsaAI	YACGTR	2 cut(s)	1181, 1349
BsaHI	GRCGYC	1 cut(s)	180
BsaWI	WCCGGW	2 cut(s)	217, 1142
BsaXI	ACNNNNNCTCC	4 cut(s)	140, 170, 170, 200
Bsc4I	CCNNNNNNNGG	7 cut(s)	84, 85, 90, 829, 968, 1049, 1701
Bse118I	RCCGGY	1 cut(s)	1142
Bse1I	ACTGG	5 cut(s)	750, 1466, 1492, 1695, 1781
Bse3DI	GCAATG	3 cut(s)	797, 1509, 1820
BseBI	CCWGG	7 cut(s)	309, 943, 1071, 1131, 1193, 1338, 1680
BseGI	GGATG	6 cut(s)	616, 627, 933, 1270, 1281, 1321
BseLI	CCNNNNNNNGG	7 cut(s)	84, 85, 90, 829, 968, 1049, 1701
BseMI	GCAATG	3 cut(s)	797, 1509, 1820
BseMII	CTCAG	6 cut(s)	154, 375, 1014, 1018, 1272, 1704
BseNI	ACTGG	5 cut(s)	750, 1466, 1492, 1695, 1781
BseRI	GAGGAG	7 cut(s)	175, 401, 870, 1218, 1237, 1317, 1836
BseSI	GKGCMC	2 cut(s)	1012, 1833
BseX3I	CGGCCG	2 cut(s)	103, 174
BseXI	GCAGC	5 cut(s)	1115, 1387, 1573, 1961, 1964
BsgI	GTGCAG	1 cut(s)	1122
Bsh1236I	CGCG	2 cut(s)	173, 1930
Bsh1285I	CGRYCG	2 cut(s)	106, 177
BshFI	GGCC	8 cut(s)	90, 105, 176, 833, 1021, 1360, 1491, 1927
BshTI	ACCGGT	1 cut(s)	1142
BsiEI	CGRYCG	2 cut(s)	106, 177
BsiHKAI	GWGCWC	2 cut(s)	1012, 1600
BsiHKCI	CYCGRG	3 cut(s)	84, 852, 1047
BsiSI	CCGG	5 cut(s)	85, 91, 218, 1048, 1143
BslFI	GGGAC	4 cut(s)	829, 1112, 1179, 1898
BslI	CCNNNNNNNGG	7 cut(s)	84, 85, 90, 829, 968, 1049, 1701
BsmAI	GTCTC	3 cut(s)	143, 276, 618
BsmBI	CGTCTC	2 cut(s)	143, 276
BsmFI	GGGAC	4 cut(s)	829, 1112, 1179, 1898
BsnI	GGCC	8 cut(s)	90, 105, 176, 833, 1021, 1360, 1491, 1927
BsoBI	CYCGRG	3 cut(s)	84, 852, 1047
Bsp119I	TTCGAA	2 cut(s)	437, 443
Bsp1286I	GDGCHC	3 cut(s)	1012, 1600, 1833
Bsp143I	GATC	3 cut(s)	949, 1626, 1745
Bsp1720I	GCTNAGC	1 cut(s)	1281
BspANI	GGCC	8 cut(s)	90, 105, 176, 833, 1021, 1360, 1491, 1927
BspCNI	CTCAG	6 cut(s)	153, 376, 1015, 1017, 1273, 1705
BspFNI	CGCG	2 cut(s)	173, 1930
BspHI	TCATGA	1 cut(s)	1623
BspLI	GGNNCC	6 cut(s)	30, 89, 1054, 1344, 1707, 1886
BspMI	ACCTGC	2 cut(s)	688, 778
BspPI	GGATC	2 cut(s)	1621, 1753
BspQI	GCTCTTC	1 cut(s)	1962
BspT104I	TTCGAA	2 cut(s)	437, 443
BspTI	CTTAAG	1 cut(s)	34
BsrDI	GCAATG	3 cut(s)	797, 1509, 1820
BsrFI	RCCGGY	1 cut(s)	1142
BsrI	ACTGG	5 cut(s)	750, 1466, 1492, 1695, 1781
BssAI	RCCGGY	1 cut(s)	1142
BssMI	GATC	3 cut(s)	949, 1626, 1745
BssNI	GRCGYC	1 cut(s)	180
BssSI	CACGAG	1 cut(s)	592
BssT1I	CCWWGG	2 cut(s)	1252, 1874
Bst2BI	CACGAG	1 cut(s)	592
Bst2UI	CCWGG	7 cut(s)	309, 943, 1071, 1131, 1193, 1338, 1680
Bst4CI	ACNGT	8 cut(s)	255, 287, 350, 405, 1186, 1366, 1662, 1889
Bst6I	CTCTTC	5 cut(s)	369, 467, 752, 1722, 1962
BstACI	GRCGYC	1 cut(s)	180
BstAFI	CTTAAG	1 cut(s)	34
BstAPI	GCANNNNNTGC	1 cut(s)	571
BstBAI	YACGTR	2 cut(s)	1181, 1349
BstBI	TTCGAA	2 cut(s)	437, 443
BstC8I	GCNNGC	2 cut(s)	1287, 1480
BstDEI	CTNAG	7 cut(s)	140, 384, 1004, 1023, 1281, 1577, 1713
BstDSI	CCRYGG	3 cut(s)	171, 578, 1928
BstF5I	GGATG	6 cut(s)	616, 627, 933, 1270, 1281, 1321
BstFNI	CGCG	2 cut(s)	173, 1930
BstKTI	GATC	3 cut(s)	952, 1629, 1748
BstMAI	GTCTC	3 cut(s)	143, 276, 618
BstMBI	GATC	3 cut(s)	949, 1626, 1745
BstMCI	CGRYCG	2 cut(s)	106, 177
BstNI	CCWGG	7 cut(s)	309, 943, 1071, 1131, 1193, 1338, 1680
BstNSI	RCATGY	1 cut(s)	713
BstPAI	GACNNNNGTC	1 cut(s)	135
BstSFI	CTRYAG	1 cut(s)	1386
BstSLI	GKGCMC	2 cut(s)	1012, 1833
BstSNI	TACGTA	1 cut(s)	1181
BstUI	CGCG	2 cut(s)	173, 1930
BstV1I	GCAGC	5 cut(s)	1115, 1387, 1573, 1961, 1964
BstV2I	GAAGAC	1 cut(s)	60
BstXI	CCANNNNNNTGG	1 cut(s)	655
BstZI	CGGCCG	2 cut(s)	103, 174
BsuRI	GGCC	8 cut(s)	90, 105, 176, 833, 1021, 1360, 1491, 1927
BtgI	CCRYGG	3 cut(s)	171, 578, 1928
BtsCI	GGATG	6 cut(s)	616, 627, 933, 1270, 1281, 1321
BtsI	GCAGTG	2 cut(s)	1105, 1113
BtsIMutI	CAGTG	6 cut(s)	743, 1010, 1012, 1105, 1113, 1485
BveI	ACCTGC	2 cut(s)	688, 778
Cac8I	GCNNGC	2 cut(s)	1287, 1480
CciI	TCATGA	1 cut(s)	1623
Cfr10I	RCCGGY	1 cut(s)	1142
Cfr13I	GGNCC	4 cut(s)	88, 1334, 1359, 1885
Cfr42I	CCGCGG	2 cut(s)	174, 1931
Cfr9I	CCCGGG	2 cut(s)	84, 1047
CseI	GACGC	3 cut(s)	65, 125, 188
Csp6I	GTAC	5 cut(s)	872, 1182, 1200, 1459, 1692
CspAI	ACCGGT	1 cut(s)	1142
CspCI	CAANNNNNGTGG	8 cut(s)	696, 731, 905, 940, 955, 990, 1416, 1451
CviAII	CATG	9 cut(s)	655, 710, 725, 835, 986, 1153, 1590, 1624, 1881
CviQI	GTAC	5 cut(s)	872, 1182, 1200, 1459, 1692
DdeI	CTNAG	7 cut(s)	140, 384, 1004, 1023, 1281, 1577, 1713
DpnI	GATC	3 cut(s)	951, 1628, 1747
DpnII	GATC	3 cut(s)	949, 1626, 1745
EaeI	YGGCCR	4 cut(s)	103, 174, 1489, 1925
EagI	CGGCCG	2 cut(s)	103, 174
Eam1104I	CTCTTC	5 cut(s)	369, 467, 752, 1722, 1962
EarI	CTCTTC	5 cut(s)	369, 467, 752, 1722, 1962
EciI	GGCGGA	2 cut(s)	103, 178
Ecl136II	GAGCTC	1 cut(s)	1598
EclXI	CGGCCG	2 cut(s)	103, 174
Eco105I	TACGTA	1 cut(s)	1181
Eco130I	CCWWGG	2 cut(s)	1252, 1874
Eco24I	GRGCYC	1 cut(s)	1600
Eco32I	GATATC	1 cut(s)	1136
Eco47I	GGWCC	2 cut(s)	1334, 1885
Eco52I	CGGCCG	2 cut(s)	103, 174
Eco53kI	GAGCTC	1 cut(s)	1598
Eco57I	CTGAAG	3 cut(s)	1034, 1746, 1830
Eco88I	CYCGRG	3 cut(s)	84, 852, 1047
EcoICRI	GAGCTC	1 cut(s)	1598
EcoRI	GAATTC	2 cut(s)	94, 439
EcoRII	CCWGG	7 cut(s)	307, 941, 1069, 1129, 1191, 1336, 1678
EcoRV	GATATC	1 cut(s)	1136
EcoT14I	CCWWGG	2 cut(s)	1252, 1874
EcoT38I	GRGCYC	1 cut(s)	1600
ErhI	CCWWGG	2 cut(s)	1252, 1874
Esp3I	CGTCTC	2 cut(s)	143, 276
FaeI	CATG	9 cut(s)	658, 713, 728, 838, 989, 1156, 1593, 1627, 1884
FaqI	GGGAC	4 cut(s)	829, 1112, 1179, 1898
FatI	CATG	9 cut(s)	654, 709, 724, 834, 985, 1152, 1589, 1623, 1880
FauNDI	CATATG	1 cut(s)	1170
FblI	GTMKAC	1 cut(s)	660
FokI	GGATG	6 cut(s)	614, 623, 940, 1277, 1288, 1328
FriOI	GRGCYC	1 cut(s)	1600
FspBI	CTAG	4 cut(s)	231, 393, 1253, 1763
GsuI	CTGGAG	2 cut(s)	1175, 1586
HaeIII	GGCC	8 cut(s)	90, 105, 176, 833, 1021, 1360, 1491, 1927
HapII	CCGG	5 cut(s)	85, 91, 218, 1048, 1143
HgaI	GACGC	3 cut(s)	65, 125, 188
Hin1I	GRCGYC	1 cut(s)	180
Hin1II	CATG	9 cut(s)	658, 713, 728, 838, 989, 1156, 1593, 1627, 1884
HpaII	CCGG	5 cut(s)	85, 91, 218, 1048, 1143
HphI	GGTGA	7 cut(s)	118, 299, 356, 383, 470, 740, 746
Hpy166II	GTNNAC	3 cut(s)	661, 1010, 1200
Hpy188I	TCNGA	7 cut(s)	1221, 1315, 1542, 1714, 1726, 1735, 1810
Hpy188III	TCNNGA	8 cut(s)	281, 1081, 1450, 1603, 1624, 1743, 1961, 1968
Hpy8I	GTNNAC	3 cut(s)	661, 1010, 1200
Hpy99I	CGWCG	2 cut(s)	182, 1893
HpyAV	CCTTC	6 cut(s)	20, 129, 373, 461, 1066, 1468
HpyCH4III	ACNGT	8 cut(s)	255, 287, 350, 405, 1186, 1366, 1662, 1889
HpyCH4IV	ACGT	3 cut(s)	545, 1180, 1348
HpyF3I	CTNAG	7 cut(s)	140, 384, 1004, 1023, 1281, 1577, 1713
HpySE526I	ACGT	3 cut(s)	545, 1180, 1348
Hsp92I	GRCGYC	1 cut(s)	180
Hsp92II	CATG	9 cut(s)	658, 713, 728, 838, 989, 1156, 1593, 1627, 1884
KspI	CCGCGG	2 cut(s)	174, 1931
Kzo9I	GATC	3 cut(s)	949, 1626, 1745
LguI	GCTCTTC	1 cut(s)	1962
LmnI	GCTCC	2 cut(s)	1342, 1595
Lsp1109I	GCAGC	5 cut(s)	1115, 1387, 1573, 1961, 1964
LweI	GCATC	3 cut(s)	918, 1130, 1370
MaeI	CTAG	4 cut(s)	231, 393, 1253, 1763
MaeII	ACGT	3 cut(s)	545, 1180, 1348
MaeIII	GTNAC	4 cut(s)	226, 344, 405, 1765
MalI	GATC	3 cut(s)	951, 1628, 1747
MboI	GATC	3 cut(s)	949, 1626, 1745
MfeI	CAATTG	1 cut(s)	693
MhlI	GDGCHC	3 cut(s)	1012, 1600, 1833
MlyI	GAGTC	3 cut(s)	398, 1739, 1762
MmeI	TCCRAC	1 cut(s)	713
MseI	TTAA	5 cut(s)	35, 453, 887, 992, 1035
MslI	CAYNNNNRTG	2 cut(s)	516, 1015
MspA1I	CMGCKG	4 cut(s)	173, 1494, 1536, 1930
MspCI	CTTAAG	1 cut(s)	34
MspI	CCGG	5 cut(s)	85, 91, 218, 1048, 1143
MunI	CAATTG	1 cut(s)	693
MvaI	CCWGG	7 cut(s)	309, 943, 1071, 1131, 1193, 1338, 1680
MvnI	CGCG	2 cut(s)	173, 1930
NciI	CCSGG	4 cut(s)	85, 86, 1048, 1049
NdeI	CATATG	1 cut(s)	1170
NdeII	GATC	3 cut(s)	949, 1626, 1745
NlaIII	CATG	9 cut(s)	658, 713, 728, 838, 989, 1156, 1593, 1627, 1884
NlaIV	GGNNCC	6 cut(s)	30, 89, 1054, 1344, 1707, 1886
NmuCI	GTSAC	3 cut(s)	344, 405, 1765
NspI	RCATGY	1 cut(s)	713
NspV	TTCGAA	2 cut(s)	437, 443
OliI	CACNNNNGTG	1 cut(s)	1015
PaeR7I	CTCGAG	1 cut(s)	852
PagI	TCATGA	1 cut(s)	1623
PciI	ACATGT	1 cut(s)	709
PciSI	GCTCTTC	1 cut(s)	1962
PcsI	WCGNNNNNNNCGW	1 cut(s)	514
PfeI	GAWTC	7 cut(s)	277, 304, 616, 781, 1573, 1799, 1964
PfoI	TCCNGGA	3 cut(s)	1069, 1191, 1678
PinAI	ACCGGT	1 cut(s)	1142
PleI	GAGTC	3 cut(s)	397, 1738, 1762
PpsI	GAGTC	3 cut(s)	397, 1738, 1762
Ppu21I	YACGTR	2 cut(s)	1181, 1349
PscI	ACATGT	1 cut(s)	709
PshAI	GACNNNNGTC	1 cut(s)	135
PshBI	ATTAAT	1 cut(s)	1035
Psp124BI	GAGCTC	1 cut(s)	1600
Psp6I	CCWGG	7 cut(s)	307, 941, 1069, 1129, 1191, 1336, 1678
PspGI	CCWGG	7 cut(s)	307, 941, 1069, 1129, 1191, 1336, 1678
PspN4I	GGNNCC	6 cut(s)	30, 89, 1054, 1344, 1707, 1886
PspPI	GGNCC	4 cut(s)	88, 1334, 1359, 1885
PspXI	VCTCGAGB	1 cut(s)	852
PsrI	GAACNNNNNNTAC	2 cut(s)	705, 737
RsaI	GTAC	5 cut(s)	873, 1183, 1201, 1460, 1693
RsaNI	GTAC	5 cut(s)	872, 1182, 1200, 1459, 1692
RseI	CAYNNNNRTG	2 cut(s)	516, 1015
SacI	GAGCTC	1 cut(s)	1600
SacII	CCGCGG	2 cut(s)	174, 1931
SapI	GCTCTTC	1 cut(s)	1962
SaqAI	TTAA	5 cut(s)	35, 453, 887, 992, 1035
Sau3AI	GATC	3 cut(s)	949, 1626, 1745
Sau96I	GGNCC	4 cut(s)	88, 1334, 1359, 1885
ScaI	AGTACT	1 cut(s)	1460
SchI	GAGTC	3 cut(s)	398, 1739, 1762
SduI	GDGCHC	3 cut(s)	1012, 1600, 1833
SfaNI	GCATC	3 cut(s)	918, 1130, 1370
SfcI	CTRYAG	1 cut(s)	1386
Sfr274I	CTCGAG	1 cut(s)	852
Sfr303I	CCGCGG	2 cut(s)	174, 1931
SfuI	TTCGAA	2 cut(s)	437, 443
SgrBI	CCGCGG	2 cut(s)	174, 1931
SinI	GGWCC	2 cut(s)	1334, 1885
SlaI	CTCGAG	1 cut(s)	852
SmaI	CCCGGG	2 cut(s)	86, 1049
SmiMI	CAYNNNNRTG	2 cut(s)	516, 1015
SmlI	CTYRAG	2 cut(s)	34, 852
SmoI	CTYRAG	2 cut(s)	34, 852
SnaBI	TACGTA	1 cut(s)	1181
SpeI	ACTAGT	1 cut(s)	1762
SspI	AATATT	1 cut(s)	891
SspMI	CTAG	4 cut(s)	231, 393, 1253, 1763
SstI	GAGCTC	1 cut(s)	1600
StyI	CCWWGG	2 cut(s)	1252, 1874
TaaI	ACNGT	8 cut(s)	255, 287, 350, 405, 1186, 1366, 1662, 1889
TaiI	ACGT	3 cut(s)	548, 1183, 1351
TaqI	TCGA	8 cut(s)	280, 397, 437, 443, 853, 1089, 1528, 1891
TaqII	GACCGA	1 cut(s)	1322
TatI	WGTACW	3 cut(s)	871, 1199, 1458
TauI	GCSGC	9 cut(s)	108, 147, 170, 173, 176, 541, 1494, 1930, 1933
TfiI	GAWTC	7 cut(s)	277, 304, 616, 781, 1573, 1799, 1964
Tru1I	TTAA	5 cut(s)	35, 453, 887, 992, 1035
Tru9I	TTAA	5 cut(s)	35, 453, 887, 992, 1035
TscAI	CASTG	6 cut(s)	750, 1012, 1017, 1105, 1113, 1492
TseFI	GTSAC	3 cut(s)	344, 405, 1765
TseI	GCWGC	5 cut(s)	1103, 1400, 1586, 1949, 1952
Tsp45I	GTSAC	3 cut(s)	344, 405, 1765
TspDTI	ATGAA	8 cut(s)	543, 713, 770, 798, 1169, 1187, 1791, 1851
TspGWI	ACGGA	1 cut(s)	1619
TspMI	CCCGGG	2 cut(s)	84, 1047
TspRI	CASTG	6 cut(s)	750, 1012, 1017, 1105, 1113, 1492
Vha464I	CTTAAG	1 cut(s)	34
VneI	GTGCAC	1 cut(s)	1008
VpaK11BI	GGWCC	2 cut(s)	1334, 1885
VspI	ATTAAT	1 cut(s)	1035
XapI	RAATTY	3 cut(s)	94, 439, 1085
XceI	RCATGY	1 cut(s)	713
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1353
XhoI	CTCGAG	1 cut(s)	852
XmaI	CCCGGG	2 cut(s)	84, 1047
XmaJI	CCTAGG	1 cut(s)	1252
XmiI	GTMKAC	1 cut(s)	660
XspI	CTAG	4 cut(s)	231, 393, 1253, 1763
ZrmI	AGTACT	1 cut(s)	1460

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.