Prupe.4G026100_v2.0.a1

Tyrosyl-DNA phosphodiesterase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
1219332 .. 1224534
5203 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G026100.2

Sequence Viewer

Length: 2028 bp
ATGCCTCGCCTTCTGATAGGATATTTGGTTCCTCTCAACGACAAGCTAGAGGAAGACACTTCAATCCCCAACATACCCCTCAACCAAGGTCCAAATTACATCGGCCGCCACACCACAGCTTCCCTCTCCGACAAAAGACTTAGCCGCAAGCACCTCACTCTCACTGCCTCTCCTGATGCTTCCGCCGTTTTGGCCGTGGATGGAACCAATCCCATTGTTGTTAAATCGGAGAATGCTAGGAATAAATTGTTTCCCAAAGACAATGCGACTATACACCATGGTGATGTTATAGAGCTAATTCCGGGGCATTATCTTTTCAAGTATAAGACACTGTCTGGTAACGAAGATGTAGATGCGCATGGTGTCCATAACCATAAGAGGGGTTCAAACGATAGAGGAAAGGGTGCTGAAGTTGAGGAGTTGAGCCGAAAACGGTCACGTAAGCTAGTGCTCCAAGAGAAAGGTTCCAATACAAGTTTTAAGGCTGAGGTGGAAGGAAGCAGCTTGGGGGCTGAGAATCGTGGGAATTTGCAGTCTAAGAGAGATGGCGGTCAAGTGGAGGCGATACAGCATTTTCGTGTTCCTAATGATAAAATACCACAGACCTTTCGGCTTTTGAATGTGCGAGGACTTCCCCAATGGGCAAATACCTCTTGTGTTTCTATAGGGGACGTGATTCAGGGGGATATTGTCGTGGCAATCCTTTCGAATTACATGGTAGACATCGATTGGTTGATACCTGCATGCCCAAAAATTGCAAAAGTCCCGCATGTCTTGGTTATTCATGGTGAGGGTGATGGTACACTGGATTATATGAAGAGAAAGAAGCCTGCAAATTGGATTCTACACAAACCACCATTGCCCATTTCATTTGGGACGCACCATTCCAAGGCCATGCTTCTTGTGTATCCTCGAGGAGTGAGAATTATTGTACACACAGCAAACTTAATATTTGTTGACTGGAACAACAAAAGCCAAGGTTTGTGGATGCAAGATTTTCCATGGAAAGATCAAAATAATCCAAGCAAAGGATGCGGATTTGAAAACGACTTAATTGATTATCTCAGTGCACTTAAGTGGCCGGAGTTTTCTGTTAATTTTCCTAACTTGGGAAGCTTCAAAATCAATCCGTCATTTTTCAAGAAGTTTGATTACAGCAATGCAGCAGTGAGGTTAATTGCATCTGTCCCTGGATATCATACGAGTACGAACATGAAAAAGTGGGGACATATGAAGCTACGCACTATTCTCCAGGAGTACACTTTTGATAAAGAGTTTCGGAAATCTCCTCTTGCTTATCAGTTCTCCTCCCTAGGATCTTTGGATGAGAAGTGGATGGCTGAGCTTGCATCTTCAATGTCGTCAGGTTTATCAGACGATAGAACTCCCCTCGGTCCTGGGGAGCCACTTATAATATGGCCTACGGTAGAAGATGTCAGATGCTCTCTAGAGGGTTATGCGGCTGGAAATGCAGTTCCAAGTCCACTAAAGAATGTGGAGAAAGACTTCTTAAGAAAGTACTGGGCAAGATGGATGGCACGCCATACTGGCCGCTGTCGTGCAATGCCACATATAAAGACATACACTCGTTACAATGGTCAGAAACTTGCTTGGTTCTTGCTAACTTCAGCAAATCTTAGCAAGGCTGCCTGGGGAGCTCTCCAGAAGAATAATTCACAGTTGATGATCCGTTCTTATGAGCTTGGAGTGCTGTTTCTGCCGTTTAAAACATGCAGTTCTGGATTTTCTTGTACCAGTAATGGGGTTCCGTCAGAGGATAAATGCGGACGGCCAGAATCTTCGGAAGCATCAAGAACAACACTTGTGACTCTGAATTGGCATGGAAACAGGAATTCAGATTCATCATCTGAAGTAATCAAATTGCCTGTGCCTTATGAACTCCCTCCCCAGCCATACACCACTGAAGCAGATGTGCCTTGGTCTTGGGACCGGCGGTATAACAAGAAAGATGTTTATGGTCAAGTTTGGCCGCGACACGTTCAGCTCTATGCTTCTCAAGCGTCATGA

Protein Analysis

676

Amino Acids

75.87

Weight (kDa)

9.3

Isoelectric Point (pI)

40.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1412
AbsI CCTCGAGG 1 cut(s) 912
Acc16I TGCGCA 1 cut(s) 357
Acc36I ACCTGC 1 cut(s) 748
AccI GTMKAC 1 cut(s) 720
AccII CGCG 1 cut(s) 1993
AclWI GGATC 2 cut(s) 1324, 1681
AcoI YGGCCR 6 cut(s) 103, 192, 1079, 1549, 1790, 1988
AcsI RAATTY 2 cut(s) 526, 1852
AcuI CTGAAG 4 cut(s) 429, 1611, 1890, 1944
AfaI GTAC 6 cut(s) 802, 933, 1207, 1259, 1520, 1753
AfiI CCNNNNNNNGG 5 cut(s) 379, 889, 1028, 1109, 1761
AflII CTTAAG 2 cut(s) 1073, 1510
AflIII ACRYGT 1 cut(s) 1996
AgsI TTSAA 8 cut(s) 63, 319, 387, 619, 1043, 1120, 1141, 1356
AjiI CACGTC 1 cut(s) 673
AjnI CCWGG 4 cut(s) 1189, 1251, 1396, 1649
AleI CACNNNNGTG 2 cut(s) 279, 1075
AloI GAACNNNNNNTCC 4 cut(s) 12, 44, 1458, 1490
Alw21I GWGCWC 3 cut(s) 453, 1072, 1660
Alw44I GTGCAC 1 cut(s) 1068
AlwI GGATC 2 cut(s) 1324, 1681
Ama87I CYCGRG 1 cut(s) 912
AoxI GGCC 8 cut(s) 103, 192, 891, 1079, 1418, 1549, 1790, 1988
ApaLI GTGCAC 1 cut(s) 1068
ApeKI GCWGC 3 cut(s) 501, 1163, 1646
ApoI RAATTY 2 cut(s) 526, 1852
Asp700I GAANNNNTTC 1 cut(s) 1505
AspA2I CCTAGG 1 cut(s) 1312
AspLEI GCGC 1 cut(s) 358
AspS9I GGNCC 3 cut(s) 89, 1394, 1948
AsuC2I CCSGG 1 cut(s) 303
AsuHPI GGTGA 3 cut(s) 293, 800, 806
AsuII TTCGAA 1 cut(s) 707
AvaI CYCGRG 1 cut(s) 912
AvaII GGWCC 3 cut(s) 89, 1394, 1948
AvrII CCTAGG 1 cut(s) 1312
BaeGI GKGCMC 1 cut(s) 1072
BanII GRGCYC 1 cut(s) 1660
BarI GAAGNNNNNNTAC 2 cut(s) 1136, 1168
BbsI GAAGAC 1 cut(s) 60
Bbv12I GWGCWC 3 cut(s) 453, 1072, 1660
BbvCI CCTCAGC 1 cut(s) 486
BbvI GCAGC 3 cut(s) 513, 1175, 1633
BccI CCATC 6 cut(s) 194, 539, 791, 1330, 1524, 1528
BceAI ACGGC 4 cut(s) 170, 179, 1705, 1805
BcgI CGANNNNNNTGC 2 cut(s) 687, 721
BciT130I CCWGG 4 cut(s) 1191, 1253, 1398, 1651
BciVI GTATCC 1 cut(s) 918
BcnI CCSGG 1 cut(s) 303
BfaI CTAG 5 cut(s) 47, 237, 446, 1313, 1448
BfmI CTRYAG 1 cut(s) 663
BfrI CTTAAG 2 cut(s) 1073, 1510
BfuAI ACCTGC 1 cut(s) 748
BfuI GTATCC 1 cut(s) 918
BglI GCCNNNNNGGC 2 cut(s) 191, 1548
BisI GCNGC 8 cut(s) 106, 145, 502, 1164, 1461, 1552, 1647, 1991
BlnI CCTAGG 1 cut(s) 1312
BlpI GCTNAGC 1 cut(s) 1341
BlsI GCNGC 8 cut(s) 107, 146, 503, 1165, 1462, 1553, 1648, 1992
BmcAI AGTACT 1 cut(s) 1520
Bme1390I CCNGG 5 cut(s) 303, 1191, 1253, 1398, 1651
Bme18I GGWCC 3 cut(s) 89, 1394, 1948
BmeT110I CYCGRG 1 cut(s) 912
BmgBI CACGTC 1 cut(s) 673
BmgT120I GGNCC 3 cut(s) 89, 1394, 1948
BmiI GGNNCC 6 cut(s) 30, 205, 466, 1404, 1767, 1949
BmrFI CCNGG 5 cut(s) 303, 1191, 1253, 1398, 1651
BmrI ACTGGG 1 cut(s) 1531
BmsI GCATC 8 cut(s) 166, 343, 978, 1022, 1190, 1358, 1430, 1817
BmuI ACTGGG 1 cut(s) 1531
BpiI GAAGAC 1 cut(s) 60
BpmI CTGGAG 2 cut(s) 1235, 1646
Bpu10I CCTNAGC 1 cut(s) 486
Bpu1102I GCTNAGC 1 cut(s) 1341
Bpu14I TTCGAA 1 cut(s) 707
BpuEI CTTGAG 1 cut(s) 2001
BpuMI CCSGG 1 cut(s) 303
Bsa29I ATCGAT 1 cut(s) 726
BsaAI YACGTR 1 cut(s) 440
BsaXI ACNNNNNCTCC 2 cut(s) 154, 184
Bsc4I CCNNNNNNNGG 5 cut(s) 379, 889, 1028, 1109, 1761
Bse118I RCCGGY 1 cut(s) 1950
Bse1I ACTGG 5 cut(s) 810, 965, 1526, 1552, 1755
Bse3DI GCAATG 3 cut(s) 857, 1165, 1569
BseBI CCWGG 4 cut(s) 1191, 1253, 1398, 1651
BseCI ATCGAT 1 cut(s) 726
BseGI GGATG 6 cut(s) 205, 993, 1037, 1330, 1341, 1539
BseLI CCNNNNNNNGG 5 cut(s) 379, 889, 1028, 1109, 1761
BseMI GCAATG 3 cut(s) 857, 1165, 1569
BseMII CTCAG 4 cut(s) 477, 504, 1078, 1332
BseNI ACTGG 5 cut(s) 810, 965, 1526, 1552, 1755
BseRI GAGGAG 4 cut(s) 431, 930, 1278, 1297
BseSI GKGCMC 1 cut(s) 1072
BseX3I CGGCCG 1 cut(s) 103
BseXI GCAGC 3 cut(s) 513, 1175, 1633
BseYI CCCAGC 1 cut(s) 1908
Bsh1236I CGCG 1 cut(s) 1993
Bsh1285I CGRYCG 1 cut(s) 106
BshFI GGCC 8 cut(s) 105, 194, 893, 1081, 1420, 1551, 1792, 1990
BshVI ATCGAT 1 cut(s) 726
BsiEI CGRYCG 1 cut(s) 106
BsiHKAI GWGCWC 3 cut(s) 453, 1072, 1660
BsiHKCI CYCGRG 1 cut(s) 912
BsiSI CCGG 3 cut(s) 302, 1082, 1951
BslFI GGGAC 6 cut(s) 683, 749, 889, 1172, 1239, 1961
BslI CCNNNNNNNGG 5 cut(s) 379, 889, 1028, 1109, 1761
BsmFI GGGAC 6 cut(s) 683, 749, 889, 1172, 1239, 1961
BsmI GAATGC 1 cut(s) 238
BsnI GGCC 8 cut(s) 105, 194, 893, 1081, 1420, 1551, 1792, 1990
BsoBI CYCGRG 1 cut(s) 912
Bsp119I TTCGAA 1 cut(s) 707
Bsp1286I GDGCHC 3 cut(s) 453, 1072, 1660
Bsp1407I TGTACA 1 cut(s) 931
Bsp143I GATC 3 cut(s) 1009, 1316, 1686
Bsp1720I GCTNAGC 1 cut(s) 1341
Bsp19I CCATGG 2 cut(s) 277, 1001
BspANI GGCC 8 cut(s) 105, 194, 893, 1081, 1420, 1551, 1792, 1990
BspCNI CTCAG 4 cut(s) 478, 505, 1077, 1333
BspDI ATCGAT 1 cut(s) 726
BspFNI CGCG 1 cut(s) 1993
BspHI TCATGA 1 cut(s) 2024
BspLI GGNNCC 6 cut(s) 30, 205, 466, 1404, 1767, 1949
BspMI ACCTGC 1 cut(s) 748
BspPI GGATC 2 cut(s) 1324, 1681
BspT104I TTCGAA 1 cut(s) 707
BspTI CTTAAG 2 cut(s) 1073, 1510
BsrDI GCAATG 3 cut(s) 857, 1165, 1569
BsrFI RCCGGY 1 cut(s) 1950
BsrGI TGTACA 1 cut(s) 931
BsrI ACTGG 5 cut(s) 810, 965, 1526, 1552, 1755
BssAI RCCGGY 1 cut(s) 1950
BssMI GATC 3 cut(s) 1009, 1316, 1686
BssT1I CCWWGG 7 cut(s) 85, 277, 888, 976, 1001, 1312, 1937
Bst2UI CCWGG 4 cut(s) 1191, 1253, 1398, 1651
Bst4CI ACNGT 4 cut(s) 333, 435, 1426, 1680
Bst6I CTCTTC 1 cut(s) 812
BstAFI CTTAAG 2 cut(s) 1073, 1510
BstAPI GCANNNNNTGC 1 cut(s) 1032
BstAUI TGTACA 1 cut(s) 931
BstBAI YACGTR 1 cut(s) 440
BstBI TTCGAA 1 cut(s) 707
BstC8I GCNNGC 5 cut(s) 149, 745, 831, 1347, 1540
BstDEI CTNAG 7 cut(s) 140, 486, 513, 537, 1064, 1341, 1637
BstDSI CCRYGG 3 cut(s) 195, 277, 1001
BstF5I GGATG 6 cut(s) 205, 993, 1037, 1330, 1341, 1539
BstFNI CGCG 1 cut(s) 1993
BstHHI GCGC 1 cut(s) 358
BstKTI GATC 3 cut(s) 1012, 1319, 1689
BstMBI GATC 3 cut(s) 1009, 1316, 1686
BstMCI CGRYCG 1 cut(s) 106
BstMWI GCNNNNNNNGC 9 cut(s) 191, 1032, 1346, 1469, 1548, 1655, 1708, 1717, 2018
BstNI CCWGG 4 cut(s) 1191, 1253, 1398, 1651
BstNSI RCATGY 3 cut(s) 747, 773, 1734
BstSCI CCNGG 5 cut(s) 301, 1189, 1251, 1396, 1649
BstSFI CTRYAG 1 cut(s) 663
BstSLI GKGCMC 1 cut(s) 1072
BstUI CGCG 1 cut(s) 1993
BstV1I GCAGC 3 cut(s) 513, 1175, 1633
BstV2I GAAGAC 1 cut(s) 60
BstX2I RGATCY 1 cut(s) 1316
BstYI RGATCY 1 cut(s) 1316
BstZI CGGCCG 1 cut(s) 103
Bsu15I ATCGAT 1 cut(s) 726
BsuI GTATCC 1 cut(s) 918
BsuRI GGCC 8 cut(s) 105, 194, 893, 1081, 1420, 1551, 1792, 1990
BsuTUI ATCGAT 1 cut(s) 726
BtgI CCRYGG 3 cut(s) 195, 277, 1001
BtrI CACGTC 1 cut(s) 673
BtsCI GGATG 6 cut(s) 205, 993, 1037, 1330, 1341, 1539
BtsI GCAGTG 2 cut(s) 162, 1173
BtsIMutI CAGTG 6 cut(s) 162, 329, 803, 1072, 1173, 1920
BveI ACCTGC 1 cut(s) 748
Cac8I GCNNGC 5 cut(s) 149, 745, 831, 1347, 1540
CciI TCATGA 1 cut(s) 2024
CfoI GCGC 1 cut(s) 358
Cfr10I RCCGGY 1 cut(s) 1950
Cfr13I GGNCC 3 cut(s) 89, 1394, 1948
ClaI ATCGAT 1 cut(s) 726
CseI GACGC 2 cut(s) 886, 2010
Csp6I GTAC 6 cut(s) 801, 932, 1206, 1258, 1519, 1752
CspCI CAANNNNNGTGG 2 cut(s) 965, 1000
CviQI GTAC 6 cut(s) 801, 932, 1206, 1258, 1519, 1752
DdeI CTNAG 7 cut(s) 140, 486, 513, 537, 1064, 1341, 1637
DpnI GATC 3 cut(s) 1011, 1318, 1688
DpnII GATC 3 cut(s) 1009, 1316, 1686
DraI TTTAAA 1 cut(s) 1726
EaeI YGGCCR 6 cut(s) 103, 192, 1079, 1549, 1790, 1988
EagI CGGCCG 1 cut(s) 103
Eam1104I CTCTTC 1 cut(s) 812
EarI CTCTTC 1 cut(s) 812
EciI GGCGGA 1 cut(s) 172
Ecl136II GAGCTC 1 cut(s) 1658
EclXI CGGCCG 1 cut(s) 103
Eco130I CCWWGG 7 cut(s) 85, 277, 888, 976, 1001, 1312, 1937
Eco24I GRGCYC 1 cut(s) 1660
Eco32I GATATC 1 cut(s) 1196
Eco47I GGWCC 3 cut(s) 89, 1394, 1948
Eco52I CGGCCG 1 cut(s) 103
Eco53kI GAGCTC 1 cut(s) 1658
Eco57I CTGAAG 4 cut(s) 429, 1611, 1890, 1944
Eco88I CYCGRG 1 cut(s) 912
EcoICRI GAGCTC 1 cut(s) 1658
EcoRI GAATTC 1 cut(s) 1852
EcoRII CCWGG 4 cut(s) 1189, 1251, 1396, 1649
EcoRV GATATC 1 cut(s) 1196
EcoT14I CCWWGG 7 cut(s) 85, 277, 888, 976, 1001, 1312, 1937
EcoT38I GRGCYC 1 cut(s) 1660
ErhI CCWWGG 7 cut(s) 85, 277, 888, 976, 1001, 1312, 1937
FaqI GGGAC 6 cut(s) 683, 749, 889, 1172, 1239, 1961
FauI CCCGC 1 cut(s) 774
FauNDI CATATG 1 cut(s) 1230
FblI GTMKAC 1 cut(s) 720
Fnu4HI GCNGC 8 cut(s) 106, 145, 502, 1164, 1461, 1552, 1647, 1991
FokI GGATG 6 cut(s) 212, 1000, 1044, 1337, 1348, 1546
FriOI GRGCYC 1 cut(s) 1660
Fsp4HI GCNGC 8 cut(s) 106, 145, 502, 1164, 1461, 1552, 1647, 1991
FspAI RTGCGCAY 1 cut(s) 357
FspBI CTAG 5 cut(s) 47, 237, 446, 1313, 1448
FspI TGCGCA 1 cut(s) 357
GlaI GCGC 1 cut(s) 357
GluI GCNGC 8 cut(s) 106, 145, 502, 1164, 1461, 1552, 1647, 1991
GsaI CCCAGC 1 cut(s) 1912
GsuI CTGGAG 2 cut(s) 1235, 1646
HaeIII GGCC 8 cut(s) 105, 194, 893, 1081, 1420, 1551, 1792, 1990
HapII CCGG 3 cut(s) 302, 1082, 1951
HgaI GACGC 2 cut(s) 886, 2010
HhaI GCGC 1 cut(s) 358
Hin6I GCGC 1 cut(s) 356
HinP1I GCGC 1 cut(s) 356
HincII GTYRAC 1 cut(s) 958
HindII GTYRAC 1 cut(s) 958
HindIII AAGCTT 1 cut(s) 1114
HinfI GANTC 6 cut(s) 517, 676, 841, 1796, 1828, 1859
HpaII CCGG 3 cut(s) 302, 1082, 1951
HphI GGTGA 3 cut(s) 293, 800, 806
Hpy166II GTNNAC 7 cut(s) 721, 803, 934, 958, 1070, 1260, 1484
Hpy188III TCNNGA 7 cut(s) 173, 1141, 1448, 1663, 1740, 1812, 2025
Hpy8I GTNNAC 7 cut(s) 721, 803, 934, 958, 1070, 1260, 1484
HpyAV CCTTC 2 cut(s) 20, 488
HpyCH4III ACNGT 4 cut(s) 333, 435, 1426, 1680
HpyCH4IV ACGT 3 cut(s) 439, 672, 1998
HpyF10VI GCNNNNNNNGC 9 cut(s) 191, 1032, 1346, 1469, 1548, 1655, 1708, 1717, 2018
HpyF3I CTNAG 7 cut(s) 140, 486, 513, 537, 1064, 1341, 1637
HpySE526I ACGT 3 cut(s) 439, 672, 1998
HspAI GCGC 1 cut(s) 356
Kzo9I GATC 3 cut(s) 1009, 1316, 1686
LmnI GCTCC 3 cut(s) 456, 1402, 1655
Lsp1109I GCAGC 3 cut(s) 513, 1175, 1633
LweI GCATC 8 cut(s) 166, 343, 978, 1022, 1190, 1358, 1430, 1817
MaeI CTAG 5 cut(s) 47, 237, 446, 1313, 1448
MaeII ACGT 3 cut(s) 439, 672, 1998
MaeIII GTNAC 4 cut(s) 338, 435, 1589, 1825
MalI GATC 3 cut(s) 1011, 1318, 1688
MboI GATC 3 cut(s) 1009, 1316, 1686
MboII GAAGA 7 cut(s) 65, 356, 829, 1344, 1442, 1678, 1791
MflI RGATCY 1 cut(s) 1316
MhlI GDGCHC 3 cut(s) 453, 1072, 1660
MlyI GAGTC 1 cut(s) 1822
MmeI TCCRAC 1 cut(s) 153
MroXI GAANNNNTTC 1 cut(s) 1505
MseI TTAA 9 cut(s) 222, 480, 947, 1052, 1074, 1095, 1175, 1511, 1725
MslI CAYNNNNRTG 4 cut(s) 279, 282, 576, 1075
MspA1I CMGCKG 1 cut(s) 1554
MspCI CTTAAG 2 cut(s) 1073, 1510
MspI CCGG 3 cut(s) 302, 1082, 1951
MspR9I CCNGG 5 cut(s) 303, 1191, 1253, 1398, 1651
Mva1269I GAATGC 1 cut(s) 238
MvaI CCWGG 4 cut(s) 1191, 1253, 1398, 1651
MvnI CGCG 1 cut(s) 1993
MwoI GCNNNNNNNGC 9 cut(s) 191, 1032, 1346, 1469, 1548, 1655, 1708, 1717, 2018
NciI CCSGG 1 cut(s) 303
NcoI CCATGG 2 cut(s) 277, 1001
NdeI CATATG 1 cut(s) 1230
NdeII GATC 3 cut(s) 1009, 1316, 1686
NlaIV GGNNCC 6 cut(s) 30, 205, 466, 1404, 1767, 1949
NmuCI GTSAC 2 cut(s) 435, 1825
NsbI TGCGCA 1 cut(s) 357
NspI RCATGY 3 cut(s) 747, 773, 1734
NspV TTCGAA 1 cut(s) 707
OliI CACNNNNGTG 2 cut(s) 279, 1075
PaeI GCATGC 1 cut(s) 747
PaeR7I CTCGAG 1 cut(s) 912
PagI TCATGA 1 cut(s) 2024
PctI GAATGC 1 cut(s) 238
PdmI GAANNNNTTC 1 cut(s) 1505
PfeI GAWTC 5 cut(s) 517, 676, 841, 1796, 1859
PflFI GACNNNGTC 1 cut(s) 331
PfoI TCCNGGA 1 cut(s) 1251
PkrI GCNGC 8 cut(s) 107, 146, 503, 1165, 1462, 1553, 1648, 1992
PleI GAGTC 1 cut(s) 1822
PpsI GAGTC 1 cut(s) 1822
Ppu21I YACGTR 1 cut(s) 440
PsiI TTATAA 1 cut(s) 1412
Psp124BI GAGCTC 1 cut(s) 1660
Psp6I CCWGG 4 cut(s) 1189, 1251, 1396, 1649
PspFI CCCAGC 1 cut(s) 1908
PspGI CCWGG 4 cut(s) 1189, 1251, 1396, 1649
PspN4I GGNNCC 6 cut(s) 30, 205, 466, 1404, 1767, 1949
PspPI GGNCC 3 cut(s) 89, 1394, 1948
PspXI VCTCGAGB 1 cut(s) 912
PsuI RGATCY 1 cut(s) 1316
PsyI GACNNNGTC 1 cut(s) 331
RsaI GTAC 6 cut(s) 802, 933, 1207, 1259, 1520, 1753
RsaNI GTAC 6 cut(s) 801, 932, 1206, 1258, 1519, 1752
RseI CAYNNNNRTG 4 cut(s) 279, 282, 576, 1075
SacI GAGCTC 1 cut(s) 1660
SaqAI TTAA 9 cut(s) 222, 480, 947, 1052, 1074, 1095, 1175, 1511, 1725
SatI GCNGC 8 cut(s) 106, 145, 502, 1164, 1461, 1552, 1647, 1991
Sau3AI GATC 3 cut(s) 1009, 1316, 1686
Sau96I GGNCC 3 cut(s) 89, 1394, 1948
ScaI AGTACT 1 cut(s) 1520
SchI GAGTC 1 cut(s) 1822
ScrFI CCNGG 5 cut(s) 303, 1191, 1253, 1398, 1651
SduI GDGCHC 3 cut(s) 453, 1072, 1660
SfaNI GCATC 8 cut(s) 166, 343, 978, 1022, 1190, 1358, 1430, 1817
SfcI CTRYAG 1 cut(s) 663
Sfr274I CTCGAG 1 cut(s) 912
SfuI TTCGAA 1 cut(s) 707
SinI GGWCC 3 cut(s) 89, 1394, 1948
SlaI CTCGAG 1 cut(s) 912
SmiMI CAYNNNNRTG 4 cut(s) 279, 282, 576, 1075
SmlI CTYRAG 4 cut(s) 912, 1073, 1510, 2016
SmoI CTYRAG 4 cut(s) 912, 1073, 1510, 2016
SphI GCATGC 1 cut(s) 747
SspI AATATT 1 cut(s) 951
SspMI CTAG 5 cut(s) 47, 237, 446, 1313, 1448
SstI GAGCTC 1 cut(s) 1660
StyD4I CCNGG 5 cut(s) 301, 1189, 1251, 1396, 1649
StyI CCWWGG 7 cut(s) 85, 277, 888, 976, 1001, 1312, 1937
TaaI ACNGT 4 cut(s) 333, 435, 1426, 1680
TaiI ACGT 3 cut(s) 442, 675, 2001
TaqI TCGA 3 cut(s) 707, 726, 913
TaqII GACCGA 1 cut(s) 1382
TatI WGTACW 3 cut(s) 931, 1257, 1518
TauI GCSGC 5 cut(s) 108, 147, 1463, 1554, 1993
TfiI GAWTC 5 cut(s) 517, 676, 841, 1796, 1859
Tru1I TTAA 9 cut(s) 222, 480, 947, 1052, 1074, 1095, 1175, 1511, 1725
Tru9I TTAA 9 cut(s) 222, 480, 947, 1052, 1074, 1095, 1175, 1511, 1725
TscAI CASTG 6 cut(s) 169, 336, 810, 1072, 1173, 1927
TseFI GTSAC 2 cut(s) 435, 1825
TseI GCWGC 3 cut(s) 501, 1163, 1646
Tsp45I GTSAC 2 cut(s) 435, 1825
TspDTI ATGAA 7 cut(s) 773, 830, 858, 1229, 1247, 1851, 1911
TspGWI ACGGA 3 cut(s) 1119, 1679, 1758
TspRI CASTG 6 cut(s) 169, 336, 810, 1072, 1173, 1927
Tth111I GACNNNGTC 1 cut(s) 331
Vha464I CTTAAG 2 cut(s) 1073, 1510
VneI GTGCAC 1 cut(s) 1068
VpaK11BI GGWCC 3 cut(s) 89, 1394, 1948
XapI RAATTY 2 cut(s) 526, 1852
XbaI TCTAGA 1 cut(s) 1447
XceI RCATGY 3 cut(s) 747, 773, 1734
XcmI CCANNNNNNNNNTGG 1 cut(s) 1413
XhoI CTCGAG 1 cut(s) 912
XmaJI CCTAGG 1 cut(s) 1312
XmiI GTMKAC 1 cut(s) 720
XmnI GAANNNNTTC 1 cut(s) 1505
XspI CTAG 5 cut(s) 47, 237, 446, 1313, 1448
ZrmI AGTACT 1 cut(s) 1520
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.