Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0010258

Physical Location & Seq

Genomic Coordinates Reverse (-)

2416252 .. 2421163

Gene Structure 4912 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG034700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1563 bp

ATGATTGTGGGAAATGTGACTCGCTTGTTTTTGTTGATGTTGAAGGGTGAGGTGGAAGGGAAGAGTGATGATGGTGGTGGTGGTCGTGTGGAGGCGATACGGCATTTTCGTGTTCCTAAGGATAAGTTACCACAGACGTTTCGGCTTTTGAATGTGCAAGGACTGCCCCCGTGGGCGAATACCTCATGTGTTTCTATAAAGGATGTGATTCAGGGAGACATCCTTTTTGCTGTCCTTTCCAATTACATGGTAGACCTTGATTGGCTGATACCTGCTTGTCCAACAGTTGCAAAAATCCCACATGTATTGGTTGTTCATGGTGAGGGTGATGGTACACTGGATTATATGAAGAGAAAGAAACCTGCAAATTGGATTCTACACAAACCACCATTGCCTATTTCATTTGGGACACACCACTCAAAGGCCATGCTTCTTGTTTATCCTCGAGGGGTGAGAATAATAGTACATACAGCAAACTTAATATTTGTTGATTGGAACAACAAAAGTCAAGGTTTGTGGATGCAAGATTTTCCCTGGAAAGATCAAAGTAATCCAAGCAAAGGTTGTGGATTTGAAAATGACTTAATTGACTATCTCAGTGCACTGAAGTGGCCCAAGTTTTCTGTTAATTTGCCTACCCTGGGAACCTTCAATATAAATCCAGGATTTTTCAAGAAATTCGATTACAGCAGTGCAGCAGTGAGGCTAATTGCATCTGTCCCTGGATATCATACCGGTAATAACATGAAAAAGTGGGGACATATGAAACTACGTACTGTTCTCCAGGAGTGTACTTTTGATAAAGAGTTTCAGAAATCTCCTCTTGCTTATCAGTTCTCCTCCCTAGGTTCTTTGGATGAGAAATGGATGGCTGAGCTTGCACATTCAATGTCATCAGGCTTTTCGGATGATAAAACTCCTCTCGGTCCTGGGGAGCCACGTATAATATGGCCCACAGTAGAAGATGTCAGATGCTCTATAGAGGGTTATGCTGCTGGAAATGCTGTTCCAAGTCCAGCAAAGAATGTGGAGAAAGATTTCTTGAAGAAGTACTGGGCAAGATGGAAGGCAAGCCACACTGGCCGCTGTCGTGCAATGCCACATATAAAGACATTTACTCGATACAGCGGTCAGAAACTTGCTTGGTTTTTGCTAACATCAGCGAATCTTAGCAAAGCTGCATGGGGAGCTCTCCAGAAGAATAATTCTCAACTCATGATCCGTTCTTATGAGCTTGGGGTGCTGTTTCTACCATATAAAACACGAAGTTCTGGATTTTCTTGTACCAGTAGTGGGGTTCCATCTGAGGATAAATCTGAAGAGTCAGATAATTCGGAATCAAGGAGAAATAAACTAGTGACTCTGAACTGGCAAGGGAACAGGAACACAGATTCATCATCTGAAGTAATCACATTGCCTGTGCCCTATGAACTCCCTCCTCAACCATACACCACCCAAGATGTTCCTTGGTCATGGGACCGGCGATACACCAAGAAAGATGTTTATGGTCAAGTTTGGCCGCGGCAAGTTCAGCTGTATGCAGCAGCTCCTCAAGATTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000012 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003697 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008081 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016787 GO:0016788 GO:0017005 GO:0033554 GO:0034641 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0070259 GO:0071704 GO:0071944 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FHA Tyr-DNA_phospho

Protein Analysis

520

Amino Acids

58.67

Weight (kDa)

9.3

Isoelectric Point (pI)

46.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tyr-DNA_phospho	PF06087	47 - 484	2e-103	Tyrosyl-DNA phosphodiesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010258)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15170
fragaria_vesca	FvH4_3g02650 FvH4_3g02650
malus_domestica	MD10G1314700.v1.1
prunus_persica	Prupe.4G026100_v2.0.a1 Prupe.4G026100_v2.0.a1
pyrus_communis	pycom10g26680
rosa_chinensis	RchiOBHm_Chr5g0003961
rosa_laevigata	RLG00000031190 RLG00000031192
rosa_multiflora	Rmu_sc0000547.1_g000008
rosa_roxburghii	Rroxscaffold_1G00072010
rosa_rugosa	Rorug04G0408200.1 Rorug04G0408300.1 Rorug04G0408400 Rorug04G0408500
rosa_samantha	Rh5AG036200 Rh5BG035100 Rh5CG038800 Rh5DG034700
rosa_wichuraiana	Rw5G003300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	444
Acc36I	ACCTGC	2 cut(s)	280, 370
AccI	GTMKAC	1 cut(s)	252
AccII	CGCG	1 cut(s)	1522
AciI	CCGC	4 cut(s)	1084, 1128, 1520, 1522
AclWI	GGATC	1 cut(s)	1213
AcoI	YGGCCR	2 cut(s)	1081, 1517
AcsI	RAATTY	1 cut(s)	677
AcuI	CTGAAG	3 cut(s)	626, 1338, 1422
AfaI	GTAC	6 cut(s)	334, 465, 775, 793, 1052, 1285
AfiI	CCNNNNNNNGG	4 cut(s)	421, 560, 641, 1293
AflIII	ACRYGT	1 cut(s)	301
AgeI	ACCGGT	1 cut(s)	734
AgsI	TTSAA	7 cut(s)	43, 151, 575, 652, 673, 888, 1045
AhlI	ACTAGT	1 cut(s)	1354
AjnI	CCWGG	6 cut(s)	533, 639, 661, 721, 783, 928
AleI	CACNNNNGTG	1 cut(s)	607
AloI	GAACNNNNNNTCC	2 cut(s)	990, 1022
AluBI	AGCT	6 cut(s)	877, 1178, 1190, 1234, 1534, 1547
AluI	AGCT	6 cut(s)	877, 1178, 1190, 1234, 1534, 1547
Alw21I	GWGCWC	2 cut(s)	604, 1192
Alw26I	GTCTC	1 cut(s)	210
Alw44I	GTGCAC	1 cut(s)	600
AlwI	GGATC	1 cut(s)	1213
Ama87I	CYCGRG	1 cut(s)	444
AoxI	GGCC	5 cut(s)	423, 611, 950, 1081, 1517
ApaLI	GTGCAC	1 cut(s)	600
ApeKI	GCWGC	5 cut(s)	695, 992, 1178, 1541, 1544
ApoI	RAATTY	1 cut(s)	677
ArsI	GACNNNNNNTTYG	2 cut(s)	209, 241
AsiGI	ACCGGT	1 cut(s)	734
Asp700I	GAANNNNTTC	1 cut(s)	1037
AspA2I	CCTAGG	1 cut(s)	844
AspS9I	GGNCC	4 cut(s)	612, 926, 951, 1477
AsuHPI	GGTGA	4 cut(s)	59, 332, 338, 463
AvaI	CYCGRG	1 cut(s)	444
AvaII	GGWCC	2 cut(s)	926, 1477
AvrII	CCTAGG	1 cut(s)	844
AxyI	CCTNAGG	1 cut(s)	117
BaeGI	GKGCMC	2 cut(s)	604, 1425
BaeI	ACNNNNGTAYC	2 cut(s)	1114, 1147
BanII	GRGCYC	1 cut(s)	1192
Bbv12I	GWGCWC	2 cut(s)	604, 1192
BbvI	GCAGC	5 cut(s)	707, 979, 1165, 1553, 1556
BccI	CCATC	5 cut(s)	65, 323, 862, 1056, 1309
BceAI	ACGGC	1 cut(s)	116
BciT130I	CCWGG	6 cut(s)	535, 641, 663, 723, 785, 930
BcoDI	GTCTC	1 cut(s)	210
BcuI	ACTAGT	1 cut(s)	1354
BfaI	CTAG	2 cut(s)	845, 1355
BfmI	CTRYAG	1 cut(s)	978
BfuAI	ACCTGC	2 cut(s)	280, 370
BglI	GCCNNNNNGGC	1 cut(s)	1080
BisI	GCNGC	8 cut(s)	696, 993, 1084, 1179, 1520, 1523, 1542, 1545
BlnI	CCTAGG	1 cut(s)	844
BlpI	GCTNAGC	1 cut(s)	873
BlsI	GCNGC	8 cut(s)	697, 994, 1085, 1180, 1521, 1524, 1543, 1546
BmcAI	AGTACT	1 cut(s)	1052
Bme1390I	CCNGG	6 cut(s)	535, 641, 663, 723, 785, 930
Bme18I	GGWCC	2 cut(s)	926, 1477
BmeT110I	CYCGRG	1 cut(s)	444
BmgT120I	GGNCC	4 cut(s)	612, 926, 951, 1477
BmiI	GGNNCC	4 cut(s)	646, 936, 1299, 1478
BmrFI	CCNGG	6 cut(s)	535, 641, 663, 723, 785, 930
BmrI	ACTGGG	1 cut(s)	1063
BmsI	GCATC	3 cut(s)	510, 722, 962
BmuI	ACTGGG	1 cut(s)	1063
BpmI	CTGGAG	2 cut(s)	767, 1178
Bpu1102I	GCTNAGC	1 cut(s)	873
BpuEI	CTTGAG	1 cut(s)	1536
BsaAI	YACGTR	2 cut(s)	773, 941
BsaJI	CCNNGG	9 cut(s)	170, 533, 639, 640, 721, 844, 929, 1466, 1520
BsaWI	WCCGGW	1 cut(s)	734
Bsc4I	CCNNNNNNNGG	4 cut(s)	421, 560, 641, 1293
Bse118I	RCCGGY	2 cut(s)	734, 1479
Bse1I	ACTGG	5 cut(s)	342, 1058, 1084, 1287, 1373
Bse21I	CCTNAGG	1 cut(s)	117
Bse3DI	GCAATG	3 cut(s)	389, 1101, 1412
BseBI	CCWGG	6 cut(s)	535, 641, 663, 723, 785, 930
BseDI	CCNNGG	9 cut(s)	170, 533, 639, 640, 721, 844, 929, 1466, 1520
BseGI	GGATG	6 cut(s)	208, 219, 525, 862, 873, 913
BseLI	CCNNNNNNNGG	4 cut(s)	421, 560, 641, 1293
BseMI	GCAATG	3 cut(s)	389, 1101, 1412
BseMII	CTCAG	3 cut(s)	610, 864, 1296
BseNI	ACTGG	5 cut(s)	342, 1058, 1084, 1287, 1373
BseRI	GAGGAG	5 cut(s)	810, 829, 909, 1428, 1539
BseSI	GKGCMC	2 cut(s)	604, 1425
BseXI	GCAGC	5 cut(s)	707, 979, 1165, 1553, 1556
BsgI	GTGCAG	1 cut(s)	714
Bsh1236I	CGCG	1 cut(s)	1522
BshFI	GGCC	5 cut(s)	425, 613, 952, 1083, 1519
BshTI	ACCGGT	1 cut(s)	734
BsiHKAI	GWGCWC	2 cut(s)	604, 1192
BsiHKCI	CYCGRG	1 cut(s)	444
BsiSI	CCGG	2 cut(s)	735, 1480
BslFI	GGGAC	4 cut(s)	421, 704, 771, 1490
BslI	CCNNNNNNNGG	4 cut(s)	421, 560, 641, 1293
BsmAI	GTCTC	1 cut(s)	210
BsmFI	GGGAC	4 cut(s)	421, 704, 771, 1490
BsnI	GGCC	5 cut(s)	425, 613, 952, 1083, 1519
BsoBI	CYCGRG	1 cut(s)	444
Bsp1286I	GDGCHC	3 cut(s)	604, 1192, 1425
Bsp143I	GATC	2 cut(s)	541, 1218
Bsp1720I	GCTNAGC	1 cut(s)	873
BspACI	CCGC	4 cut(s)	1084, 1128, 1520, 1522
BspANI	GGCC	5 cut(s)	425, 613, 952, 1083, 1519
BspCNI	CTCAG	3 cut(s)	609, 865, 1297
BspFNI	CGCG	1 cut(s)	1522
BspHI	TCATGA	1 cut(s)	1215
BspLI	GGNNCC	4 cut(s)	646, 936, 1299, 1478
BspMI	ACCTGC	2 cut(s)	280, 370
BspPI	GGATC	1 cut(s)	1213
BsrDI	GCAATG	3 cut(s)	389, 1101, 1412
BsrFI	RCCGGY	2 cut(s)	734, 1479
BsrI	ACTGG	5 cut(s)	342, 1058, 1084, 1287, 1373
BssAI	RCCGGY	2 cut(s)	734, 1479
BssECI	CCNNGG	9 cut(s)	170, 533, 639, 640, 721, 844, 929, 1466, 1520
BssMI	GATC	2 cut(s)	541, 1218
BssT1I	CCWWGG	2 cut(s)	844, 1466
Bst2UI	CCWGG	6 cut(s)	535, 641, 663, 723, 785, 930
Bst4CI	ACNGT	3 cut(s)	286, 778, 958
Bst6I	CTCTTC	3 cut(s)	56, 344, 1314
BstAPI	GCANNNNNTGC	1 cut(s)	163
BstBAI	YACGTR	2 cut(s)	773, 941
BstC8I	GCNNGC	2 cut(s)	879, 1072
BstDEI	CTNAG	5 cut(s)	117, 596, 873, 1169, 1305
BstDSI	CCRYGG	2 cut(s)	170, 1520
BstF5I	GGATG	6 cut(s)	208, 219, 525, 862, 873, 913
BstFNI	CGCG	1 cut(s)	1522
BstKTI	GATC	2 cut(s)	544, 1221
BstMAI	GTCTC	1 cut(s)	210
BstMBI	GATC	2 cut(s)	541, 1218
BstMWI	GCNNNNNNNGC	7 cut(s)	163, 878, 1001, 1080, 1187, 1240, 1531
BstNI	CCWGG	6 cut(s)	535, 641, 663, 723, 785, 930
BstNSI	RCATGY	1 cut(s)	305
BstSCI	CCNGG	6 cut(s)	533, 639, 661, 721, 783, 928
BstSFI	CTRYAG	1 cut(s)	978
BstSLI	GKGCMC	2 cut(s)	604, 1425
BstSNI	TACGTA	1 cut(s)	773
BstUI	CGCG	1 cut(s)	1522
BstV1I	GCAGC	5 cut(s)	707, 979, 1165, 1553, 1556
BstXI	CCANNNNNNTGG	1 cut(s)	247
Bsu36I	CCTNAGG	1 cut(s)	117
BsuRI	GGCC	5 cut(s)	425, 613, 952, 1083, 1519
BtgI	CCRYGG	2 cut(s)	170, 1520
BtsCI	GGATG	6 cut(s)	208, 219, 525, 862, 873, 913
BtsI	GCAGTG	2 cut(s)	697, 705
BtsIMutI	CAGTG	6 cut(s)	335, 602, 604, 697, 705, 1077
BveI	ACCTGC	2 cut(s)	280, 370
Cac8I	GCNNGC	2 cut(s)	879, 1072
CciI	TCATGA	1 cut(s)	1215
Cfr10I	RCCGGY	2 cut(s)	734, 1479
Cfr13I	GGNCC	4 cut(s)	612, 926, 951, 1477
Cfr42I	CCGCGG	1 cut(s)	1523
Csp6I	GTAC	6 cut(s)	333, 464, 774, 792, 1051, 1284
CspAI	ACCGGT	1 cut(s)	734
CspCI	CAANNNNNGTGG	8 cut(s)	288, 323, 497, 532, 547, 582, 1008, 1043
CviAII	CATG	9 cut(s)	186, 247, 302, 317, 427, 745, 1182, 1216, 1473
CviQI	GTAC	6 cut(s)	333, 464, 774, 792, 1051, 1284
DdeI	CTNAG	5 cut(s)	117, 596, 873, 1169, 1305
DpnI	GATC	2 cut(s)	543, 1220
DpnII	GATC	2 cut(s)	541, 1218
EaeI	YGGCCR	2 cut(s)	1081, 1517
Eam1104I	CTCTTC	3 cut(s)	56, 344, 1314
EarI	CTCTTC	3 cut(s)	56, 344, 1314
Ecl136II	GAGCTC	1 cut(s)	1190
Eco105I	TACGTA	1 cut(s)	773
Eco130I	CCWWGG	2 cut(s)	844, 1466
Eco24I	GRGCYC	1 cut(s)	1192
Eco32I	GATATC	1 cut(s)	728
Eco47I	GGWCC	2 cut(s)	926, 1477
Eco53kI	GAGCTC	1 cut(s)	1190
Eco57I	CTGAAG	3 cut(s)	626, 1338, 1422
Eco81I	CCTNAGG	1 cut(s)	117
Eco88I	CYCGRG	1 cut(s)	444
EcoICRI	GAGCTC	1 cut(s)	1190
EcoRII	CCWGG	6 cut(s)	533, 639, 661, 721, 783, 928
EcoRV	GATATC	1 cut(s)	728
EcoT14I	CCWWGG	2 cut(s)	844, 1466
EcoT38I	GRGCYC	1 cut(s)	1192
ErhI	CCWWGG	2 cut(s)	844, 1466
FaeI	CATG	9 cut(s)	189, 250, 305, 320, 430, 748, 1185, 1219, 1476
FaqI	GGGAC	4 cut(s)	421, 704, 771, 1490
FatI	CATG	9 cut(s)	185, 246, 301, 316, 426, 744, 1181, 1215, 1472
FauNDI	CATATG	1 cut(s)	762
FblI	GTMKAC	1 cut(s)	252
Fnu4HI	GCNGC	8 cut(s)	696, 993, 1084, 1179, 1520, 1523, 1542, 1545
FokI	GGATG	6 cut(s)	206, 215, 532, 869, 880, 920
FriOI	GRGCYC	1 cut(s)	1192
Fsp4HI	GCNGC	8 cut(s)	696, 993, 1084, 1179, 1520, 1523, 1542, 1545
FspBI	CTAG	2 cut(s)	845, 1355
GluI	GCNGC	8 cut(s)	696, 993, 1084, 1179, 1520, 1523, 1542, 1545
GsuI	CTGGAG	2 cut(s)	767, 1178
HaeIII	GGCC	5 cut(s)	425, 613, 952, 1083, 1519
HapII	CCGG	2 cut(s)	735, 1480
Hin1II	CATG	9 cut(s)	189, 250, 305, 320, 430, 748, 1185, 1219, 1476
HinfI	GANTC	9 cut(s)	19, 208, 373, 1165, 1322, 1337, 1360, 1391, 1556
HpaII	CCGG	2 cut(s)	735, 1480
HphI	GGTGA	4 cut(s)	59, 332, 338, 463
Hpy166II	GTNNAC	4 cut(s)	253, 335, 602, 792
Hpy188III	TCNNGA	7 cut(s)	673, 1042, 1195, 1216, 1272, 1553, 1560
Hpy8I	GTNNAC	4 cut(s)	253, 335, 602, 792
HpyAV	CCTTC	4 cut(s)	37, 50, 658, 1060
HpyCH4III	ACNGT	3 cut(s)	286, 778, 958
HpyCH4IV	ACGT	3 cut(s)	137, 772, 940
HpyF10VI	GCNNNNNNNGC	7 cut(s)	163, 878, 1001, 1080, 1187, 1240, 1531
HpyF3I	CTNAG	5 cut(s)	117, 596, 873, 1169, 1305
HpySE526I	ACGT	3 cut(s)	137, 772, 940
Hsp92II	CATG	9 cut(s)	189, 250, 305, 320, 430, 748, 1185, 1219, 1476
KspI	CCGCGG	1 cut(s)	1523
Kzo9I	GATC	2 cut(s)	541, 1218
LmnI	GCTCC	3 cut(s)	934, 1187, 1552
Lsp1109I	GCAGC	5 cut(s)	707, 979, 1165, 1553, 1556
LweI	GCATC	3 cut(s)	510, 722, 962
MaeI	CTAG	2 cut(s)	845, 1355
MaeII	ACGT	3 cut(s)	137, 772, 940
MaeIII	GTNAC	3 cut(s)	16, 126, 1357
MalI	GATC	2 cut(s)	543, 1220
MboI	GATC	2 cut(s)	541, 1218
MboII	GAAGA	6 cut(s)	73, 361, 974, 1057, 1210, 1331
MhlI	GDGCHC	3 cut(s)	604, 1192, 1425
MluCI	AATT	8 cut(s)	241, 367, 585, 628, 677, 708, 1204, 1330
MlyI	GAGTC	3 cut(s)	13, 1331, 1354
MmeI	TCCRAC	1 cut(s)	305
MroXI	GAANNNNTTC	1 cut(s)	1037
MseI	TTAA	3 cut(s)	479, 584, 627
MslI	CAYNNNNRTG	2 cut(s)	108, 607
MspA1I	CMGCKG	4 cut(s)	1086, 1128, 1522, 1534
MspI	CCGG	2 cut(s)	735, 1480
MspR9I	CCNGG	6 cut(s)	535, 641, 663, 723, 785, 930
MvaI	CCWGG	6 cut(s)	535, 641, 663, 723, 785, 930
MvnI	CGCG	1 cut(s)	1522
MwoI	GCNNNNNNNGC	7 cut(s)	163, 878, 1001, 1080, 1187, 1240, 1531
NdeI	CATATG	1 cut(s)	762
NdeII	GATC	2 cut(s)	541, 1218
NlaIII	CATG	9 cut(s)	189, 250, 305, 320, 430, 748, 1185, 1219, 1476
NlaIV	GGNNCC	4 cut(s)	646, 936, 1299, 1478
NmuCI	GTSAC	2 cut(s)	16, 1357
NspI	RCATGY	1 cut(s)	305
OliI	CACNNNNGTG	1 cut(s)	607
PaeR7I	CTCGAG	1 cut(s)	444
PagI	TCATGA	1 cut(s)	1215
PasI	CCCWGGG	1 cut(s)	640
PciI	ACATGT	1 cut(s)	301
PcsI	WCGNNNNNNNCGW	1 cut(s)	106
PdmI	GAANNNNTTC	1 cut(s)	1037
PfeI	GAWTC	6 cut(s)	208, 373, 1165, 1337, 1391, 1556
PfoI	TCCNGGA	2 cut(s)	661, 783
PinAI	ACCGGT	1 cut(s)	734
PkrI	GCNGC	8 cut(s)	697, 994, 1085, 1180, 1521, 1524, 1543, 1546
PleI	GAGTC	3 cut(s)	13, 1330, 1354
PpsI	GAGTC	3 cut(s)	13, 1330, 1354
Ppu21I	YACGTR	2 cut(s)	773, 941
PscI	ACATGT	1 cut(s)	301
Psp124BI	GAGCTC	1 cut(s)	1192
Psp6I	CCWGG	6 cut(s)	533, 639, 661, 721, 783, 928
PspGI	CCWGG	6 cut(s)	533, 639, 661, 721, 783, 928
PspN4I	GGNNCC	4 cut(s)	646, 936, 1299, 1478
PspPI	GGNCC	4 cut(s)	612, 926, 951, 1477
PspXI	VCTCGAGB	1 cut(s)	444
PsrI	GAACNNNNNNTAC	2 cut(s)	297, 329
PvuII	CAGCTG	1 cut(s)	1534
RsaI	GTAC	6 cut(s)	334, 465, 775, 793, 1052, 1285
RsaNI	GTAC	6 cut(s)	333, 464, 774, 792, 1051, 1284
RseI	CAYNNNNRTG	2 cut(s)	108, 607
SacI	GAGCTC	1 cut(s)	1192
SacII	CCGCGG	1 cut(s)	1523
SaqAI	TTAA	3 cut(s)	479, 584, 627
SatI	GCNGC	8 cut(s)	696, 993, 1084, 1179, 1520, 1523, 1542, 1545
Sau3AI	GATC	2 cut(s)	541, 1218
Sau96I	GGNCC	4 cut(s)	612, 926, 951, 1477
ScaI	AGTACT	1 cut(s)	1052
SchI	GAGTC	3 cut(s)	13, 1331, 1354
ScrFI	CCNGG	6 cut(s)	535, 641, 663, 723, 785, 930
SduI	GDGCHC	3 cut(s)	604, 1192, 1425
SfaNI	GCATC	3 cut(s)	510, 722, 962
SfcI	CTRYAG	1 cut(s)	978
Sfr274I	CTCGAG	1 cut(s)	444
Sfr303I	CCGCGG	1 cut(s)	1523
SgrBI	CCGCGG	1 cut(s)	1523
SinI	GGWCC	2 cut(s)	926, 1477
SlaI	CTCGAG	1 cut(s)	444
SmiMI	CAYNNNNRTG	2 cut(s)	108, 607
SmlI	CTYRAG	2 cut(s)	444, 1551
SmoI	CTYRAG	2 cut(s)	444, 1551
SnaBI	TACGTA	1 cut(s)	773
SpeI	ACTAGT	1 cut(s)	1354
Sse9I	AATT	8 cut(s)	241, 367, 585, 628, 677, 708, 1204, 1330
SsiI	CCGC	4 cut(s)	1084, 1128, 1520, 1522
SspI	AATATT	1 cut(s)	483
SspMI	CTAG	2 cut(s)	845, 1355
SstI	GAGCTC	1 cut(s)	1192
StyD4I	CCNGG	6 cut(s)	533, 639, 661, 721, 783, 928
StyI	CCWWGG	2 cut(s)	844, 1466
TaaI	ACNGT	3 cut(s)	286, 778, 958
TaiI	ACGT	3 cut(s)	140, 775, 943
TaqI	TCGA	3 cut(s)	445, 681, 1120
TaqII	GACCGA	1 cut(s)	914
TasI	AATT	8 cut(s)	241, 367, 585, 628, 677, 708, 1204, 1330
TatI	WGTACW	3 cut(s)	463, 791, 1050
TauI	GCSGC	3 cut(s)	1086, 1522, 1525
TfiI	GAWTC	6 cut(s)	208, 373, 1165, 1337, 1391, 1556
Tru1I	TTAA	3 cut(s)	479, 584, 627
Tru9I	TTAA	3 cut(s)	479, 584, 627
TscAI	CASTG	6 cut(s)	342, 604, 609, 697, 705, 1084
TseFI	GTSAC	2 cut(s)	16, 1357
TseI	GCWGC	5 cut(s)	695, 992, 1178, 1541, 1544
Tsp45I	GTSAC	2 cut(s)	16, 1357
TspDTI	ATGAA	7 cut(s)	305, 362, 390, 761, 779, 1383, 1443
TspGWI	ACGGA	1 cut(s)	1211
TspRI	CASTG	6 cut(s)	342, 604, 609, 697, 705, 1084
VneI	GTGCAC	1 cut(s)	600
VpaK11BI	GGWCC	2 cut(s)	926, 1477
XapI	RAATTY	1 cut(s)	677
XceI	RCATGY	1 cut(s)	305
XcmI	CCANNNNNNNNNTGG	1 cut(s)	945
XhoI	CTCGAG	1 cut(s)	444
XmaJI	CCTAGG	1 cut(s)	844
XmiI	GTMKAC	1 cut(s)	252
XmnI	GAANNNNTTC	1 cut(s)	1037
XspI	CTAG	2 cut(s)	845, 1355
ZrmI	AGTACT	1 cut(s)	1052

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.