Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0004036

Physical Location & Seq

Genomic Coordinates Reverse (-)

2707499 .. 2712079

Gene Structure 4581 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g04740.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

ATGACTGCCGAGACGCTCTCGCAGCTCCCAAACGGCGCCGTCGTCGCTAACGGCGATCTGAATCCTCTCTCCGACGCATCCGACGGCGCCGCCGTCAAGAAATCGAGGGAGAGCGAACGACGCCGTCGGAGGAGAAAGCAGAAGAAGAATCGTAAAGCTTCTCAGTCCACCGCCAGTGACGTCAGCGACGGCGATGATGTGAAGGAGAACAACGATCCTCAACAGGTTGTTGAGCAAGTTGAAATCGAATATGTTCCGGAGAAAGCTGAGCTAAATGAAGAATTGGATGAGGAGTTCAGAAAAATTTTCGAGAAATTTACATTCAAGAGTGCTGCGGGTGTCGAGGAGGAAAAGAAAGATGAGGCTCAAGAAGGAGCCACAAAGAAGAAGGCTGACTCAGATTCTGAAGAGGAGGAACAGGATAATGAGCAAAAAGAGAAAGGCGTATCAAACAAGAAGAAAAAGCTTCAACGTCGAATGAAGATTGCAGAATTGAAACAGATCTGTGCAAGGCCTGATGTTGTTGAGGTGTGGGATGCAACTGCAGCTGATCCTAAATTGCTGGTCTTTTTGAAATCGTATCGGAATACCGTACCGGTGCCAAGGCATTGGTGCCAGAAAAGGAAGTTTTTACAGGGTAAACGTGGTATCGAGAAGCAACCATTTCAGCTTCCTGATTTCATTGCTGCAACTGGAATTGAGAAAATTAGACAGGCATACATTGAAAAAGAAGATAGTAAGAAGTTGAAGCAAAAGCAGCGAGAACGCATGCAGCCAAAGATGGGCAAAATGGATATTGATTATCAGGTTCTGCATGATGCCTTTTTCAAGTACCAAACTAAGCCAAAGCTCACAACTCTTGGTGATCTGTACCATGAAGGGAAAGAATTTGAGGTAAAATTAAGGGAGATGAAGCCAGGCATGCTGTCACATGAACTGAAAGAAGCTCTTGGTATGCCAGATGGTGCTCCTCCACCATGGCTCATAAATATGCAGAGATATGGGCCTCCCCCATCATATCCACATTTGAAAATCCCTGGACTCAATGCTCCAATCCCCGCCGGCGCTAGCTTTGGTTATCATCCAGGTGGCTGGGGAAAGCCTCCTGTTGATGAATATGGCCACCCATTGTATGGAGACGTTTTTGGCGTTCAGCAACAAGATCAACCTAATTATGAGGAAGAGCCGGTTGATAAGACGAAACATTGGGGTGATTTGGAGGAAGAGGAAGAGGACGAAGAGGATGATGATGAAGAGGAAGAACCGATGGAGGAGGAAGAAATAGAGGATGGTTTTAAATCTGTTGAGACCGATGTTACAAGTATTCCTGCTGGCGTTGAGACACCTGATGTCATTGACCTTCGCAAGCAGAGAAAGGAGCCTGAAAGGCCTTTATACCAAGTACTTGAAGAGAAAGAAGAGAGGATTGGTTCAGGGACATTGCTTGGGACGACTCACACTTATGTTGTTGGTAGTGGCACACAAGACAAAGCAGGAGCTAAAAGGGTGGATCTACTAAGAGCTCAGAAAGCAGATAAAGTGGATGTCACTCTCCAACCTGAAGAATTGGAAGCTATGGAGAATGTCTTGCCTGAAAAGTATGAGCAAGCAAGGGAAGAGGAGAAGCTGCGAAATCAGCGAGAGGATTTCAGTGACTTGGTTGTGGAGCATGAGAAGAAGAGGAAGCGTAAGCAGGAAAAGGAAGGGAAATCGAGCAAAAAGAAAGGAGACTTTAAGTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005686 GO:0005689 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0030532 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0070013 GO:0071011 GO:0071013 GO:0071704 GO:0090304 GO:0097525 GO:0120114 GO:1901360 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DUF382 PSP

Protein Analysis

581

Amino Acids

66.5

Weight (kDa)

5.25

Isoelectric Point (pI)

54.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF382	PF04037	171 - 296	8.8e-60	Domain of unknown function (DUF382)
PSP	PF04046	305 - 350	1e-22	PSP

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004036)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11520 AT4G21660 AT4G21660 AT4G21660
fragaria_vesca	FvH4_3g04740 FvH4_6g45300
malus_domestica	MD05G1318200.v1.1 MD10G1297600.v1.1
prunus_persica	Prupe.4G042600_v2.0.a1 Prupe.4G042600_v2.0.a1
pyrus_communis	pycom05g29460 pycom10g25110
rosa_chinensis	RchiOBHm_Chr2g0163041 RchiOBHm_Chr5g0007761
rosa_laevigata	RLG00000021367 RLG00000031486
rosa_multiflora	Rmu_co8286435.1_g000001 Rmu_co8351911.1_g000001 Rmu_sc0005098.1_g000019 Rmu_sc0007039.1_g000007
rosa_roxburghii	Rroxscaffold_1G00068650 Rroxscaffold_2G00087600
rosa_rugosa	Rorug02G0500000.1 Rorug04G0430100
rosa_samantha	Rh2AG566300 Rh2BG578600 Rh2CG548500 Rh5AG058500 Rh5BG055300 Rh5CG065100 Rh5DG054300
rosa_wichuraiana	Rw2G046870 Rw5G006120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	183
AccB1I	GGYRCC	4 cut(s)	35, 86, 598, 612
AccB7I	CCANNNNNTGG	1 cut(s)	1133
AccIII	TCCGGA	1 cut(s)	256
AciI	CCGC	4 cut(s)	90, 171, 335, 1059
AclWI	GGATC	3 cut(s)	209, 545, 1518
AcoI	YGGCCR	1 cut(s)	1120
AcsI	RAATTY	3 cut(s)	303, 314, 887
AcuI	CTGAAG	2 cut(s)	426, 1581
AcyI	GRCGYC	4 cut(s)	36, 87, 121, 180
AfaI	GTAC	4 cut(s)	594, 833, 872, 1404
AfiI	CCNNNNNNNGG	2 cut(s)	782, 1133
AgeI	ACCGGT	1 cut(s)	595
AjnI	CCWGG	3 cut(s)	916, 1036, 1084
AjuI	GAANNNNNNNTTGG	2 cut(s)	1410, 1442
AloI	GAACNNNNNNTCC	2 cut(s)	278, 310
Alw21I	GWGCWC	2 cut(s)	970, 1525
Alw26I	GTCTC	5 cut(s)	5, 1131, 1301, 1334, 1722
AlwI	GGATC	3 cut(s)	209, 545, 1518
AlwNI	CAGNNNCTG	2 cut(s)	404, 811
Aor13HI	TCCGGA	1 cut(s)	256
AoxI	GGCC	4 cut(s)	512, 1004, 1120, 1388
ApeKI	GCWGC	7 cut(s)	22, 332, 545, 686, 757, 772, 1627
ApoI	RAATTY	3 cut(s)	303, 314, 887
AsiGI	ACCGGT	1 cut(s)	595
Asp700I	GAANNNNTTC	1 cut(s)	252
AspLEI	GCGC	3 cut(s)	38, 89, 1067
AspS9I	GGNCC	1 cut(s)	1004
AsuHPI	GGTGA	2 cut(s)	875, 1223
AsuNHI	GCTAGC	1 cut(s)	1067
BalI	TGGCCA	1 cut(s)	1122
BanI	GGYRCC	4 cut(s)	35, 86, 598, 612
BanII	GRGCYC	1 cut(s)	1525
Bbv12I	GWGCWC	2 cut(s)	970, 1525
BbvI	GCAGC	7 cut(s)	34, 319, 557, 673, 769, 784, 1614
BccI	CCATC	5 cut(s)	775, 956, 1021, 1261, 1283
BceAI	ACGGC	7 cut(s)	23, 49, 67, 77, 100, 108, 205
BciT130I	CCWGG	3 cut(s)	918, 1038, 1086
BcoDI	GTCTC	5 cut(s)	5, 1131, 1301, 1334, 1722
BfaI	CTAG	1 cut(s)	1068
BfmI	CTRYAG	1 cut(s)	543
BfoI	RGCGCY	3 cut(s)	39, 90, 1068
BglI	GCCNNNNNGGC	1 cut(s)	1387
BglII	AGATCT	1 cut(s)	501
BisI	GCNGC	8 cut(s)	23, 90, 333, 546, 687, 758, 773, 1628
BlpI	GCTNAGC	1 cut(s)	267
BlsI	GCNGC	8 cut(s)	24, 91, 334, 547, 688, 759, 774, 1629
BmcAI	AGTACT	1 cut(s)	1404
Bme1390I	CCNGG	3 cut(s)	918, 1038, 1086
BmgT120I	GGNCC	1 cut(s)	1004
BmiI	GGNNCC	6 cut(s)	37, 88, 376, 600, 614, 1380
BmrFI	CCNGG	3 cut(s)	918, 1038, 1086
BmsI	GCATC	3 cut(s)	86, 526, 808
BmtI	GCTAGC	1 cut(s)	1071
BplI	GAGNNNNNCTC	1 cut(s)	34
Bpu1102I	GCTNAGC	1 cut(s)	267
BpuEI	CTTGAG	1 cut(s)	351
BsaBI	GATNNNNATC	1 cut(s)	60
BsaHI	GRCGYC	4 cut(s)	36, 87, 121, 180
BsaI	GGTCTC	1 cut(s)	1301
BsaJI	CCNNGG	3 cut(s)	602, 977, 1036
BsaWI	WCCGGW	2 cut(s)	256, 595
Bsc4I	CCNNNNNNNGG	2 cut(s)	782, 1133
Bse118I	RCCGGY	3 cut(s)	595, 1061, 1186
Bse1I	ACTGG	2 cut(s)	174, 697
Bse3DI	GCAATG	2 cut(s)	681, 1439
Bse8I	GATNNNNATC	1 cut(s)	60
BseAI	TCCGGA	1 cut(s)	256
BseBI	CCWGG	3 cut(s)	918, 1038, 1086
BseDI	CCNNGG	3 cut(s)	602, 977, 1036
BseGI	GGATG	7 cut(s)	77, 292, 541, 1081, 1249, 1294, 1549
BseJI	GATNNNNATC	1 cut(s)	60
BseLI	CCNNNNNNNGG	2 cut(s)	782, 1133
BseMI	GCAATG	2 cut(s)	681, 1439
BseMII	CTCAG	4 cut(s)	176, 258, 411, 1538
BseNI	ACTGG	2 cut(s)	174, 697
BseRI	GAGGAG	7 cut(s)	145, 305, 359, 425, 960, 1286, 1634
BseXI	GCAGC	7 cut(s)	34, 319, 557, 673, 769, 784, 1614
BseYI	CCCAGC	1 cut(s)	1092
BshFI	GGCC	4 cut(s)	514, 1006, 1122, 1390
BshNI	GGYRCC	4 cut(s)	35, 86, 598, 612
BshTI	ACCGGT	1 cut(s)	595
BsiHKAI	GWGCWC	2 cut(s)	970, 1525
BsiSI	CCGG	4 cut(s)	257, 596, 1062, 1187
BslFI	GGGAC	2 cut(s)	1450, 1462
BslI	CCNNNNNNNGG	2 cut(s)	782, 1133
BsmAI	GTCTC	5 cut(s)	5, 1131, 1301, 1334, 1722
BsmBI	CGTCTC	2 cut(s)	5, 1131
BsmFI	GGGAC	2 cut(s)	1450, 1462
BsnI	GGCC	4 cut(s)	514, 1006, 1122, 1390
Bso31I	GGTCTC	1 cut(s)	1301
Bsp1286I	GDGCHC	2 cut(s)	970, 1525
Bsp13I	TCCGGA	1 cut(s)	256
Bsp143I	GATC	7 cut(s)	55, 214, 501, 550, 865, 1162, 1510
Bsp1720I	GCTNAGC	1 cut(s)	267
Bsp19I	CCATGG	1 cut(s)	977
BspACI	CCGC	4 cut(s)	90, 171, 335, 1059
BspANI	GGCC	4 cut(s)	514, 1006, 1122, 1390
BspCNI	CTCAG	4 cut(s)	175, 259, 410, 1537
BspEI	TCCGGA	1 cut(s)	256
BspLI	GGNNCC	6 cut(s)	37, 88, 376, 600, 614, 1380
BspMAI	CTGCAG	1 cut(s)	547
BspOI	GCTAGC	1 cut(s)	1071
BspPI	GGATC	3 cut(s)	209, 545, 1518
BspQI	GCTCTTC	1 cut(s)	1176
BspT107I	GGYRCC	4 cut(s)	35, 86, 598, 612
BspTNI	GGTCTC	1 cut(s)	1301
BsrDI	GCAATG	2 cut(s)	681, 1439
BsrFI	RCCGGY	3 cut(s)	595, 1061, 1186
BsrI	ACTGG	2 cut(s)	174, 697
BssAI	RCCGGY	3 cut(s)	595, 1061, 1186
BssECI	CCNNGG	3 cut(s)	602, 977, 1036
BssMI	GATC	7 cut(s)	55, 214, 501, 550, 865, 1162, 1510
BssNI	GRCGYC	4 cut(s)	36, 87, 121, 180
BssT1I	CCWWGG	2 cut(s)	602, 977
Bst2UI	CCWGG	3 cut(s)	918, 1038, 1086
Bst4CI	ACNGT	1 cut(s)	592
BstACI	GRCGYC	4 cut(s)	36, 87, 121, 180
BstC8I	GCNNGC	7 cut(s)	770, 923, 1063, 1069, 1333, 1367, 1608
BstDEI	CTNAG	6 cut(s)	162, 267, 397, 840, 1517, 1524
BstDSI	CCRYGG	1 cut(s)	977
BstF5I	GGATG	7 cut(s)	77, 292, 541, 1081, 1249, 1294, 1549
BstH2I	RGCGCY	3 cut(s)	39, 90, 1068
BstHHI	GCGC	3 cut(s)	38, 89, 1067
BstKTI	GATC	7 cut(s)	58, 217, 504, 553, 868, 1165, 1513
BstMAI	GTCTC	5 cut(s)	5, 1131, 1301, 1334, 1722
BstMBI	GATC	7 cut(s)	55, 214, 501, 550, 865, 1162, 1510
BstMWI	GCNNNNNNNGC	9 cut(s)	22, 44, 120, 545, 757, 922, 1387, 1529, 1636
BstNI	CCWGG	3 cut(s)	918, 1038, 1086
BstNSI	RCATGY	2 cut(s)	772, 925
BstSCI	CCNGG	3 cut(s)	916, 1036, 1084
BstSFI	CTRYAG	1 cut(s)	543
BstV1I	GCAGC	7 cut(s)	34, 319, 557, 673, 769, 784, 1614
BstX2I	RGATCY	2 cut(s)	501, 1510
BstXI	CCANNNNNNTGG	2 cut(s)	609, 1092
BstYI	RGATCY	2 cut(s)	501, 1510
BsuRI	GGCC	4 cut(s)	514, 1006, 1122, 1390
BtgI	CCRYGG	1 cut(s)	977
BtgZI	GCGATG	1 cut(s)	207
BtsCI	GGATG	7 cut(s)	77, 292, 541, 1081, 1249, 1294, 1549
BtsIMutI	CAGTG	2 cut(s)	181, 1657
Cac8I	GCNNGC	7 cut(s)	770, 923, 1063, 1069, 1333, 1367, 1608
CaiI	CAGNNNCTG	2 cut(s)	404, 811
CfoI	GCGC	3 cut(s)	38, 89, 1067
Cfr10I	RCCGGY	3 cut(s)	595, 1061, 1186
Cfr13I	GGNCC	1 cut(s)	1004
CseI	GACGC	3 cut(s)	22, 83, 129
Csp6I	GTAC	4 cut(s)	593, 832, 871, 1403
CspAI	ACCGGT	1 cut(s)	595
CviAII	CATG	7 cut(s)	769, 815, 875, 922, 932, 978, 1670
CviQI	GTAC	4 cut(s)	593, 832, 871, 1403
DdeI	CTNAG	6 cut(s)	162, 267, 397, 840, 1517, 1524
DinI	GGCGCC	2 cut(s)	37, 88
DpnI	GATC	7 cut(s)	57, 216, 503, 552, 867, 1164, 1512
DpnII	GATC	7 cut(s)	55, 214, 501, 550, 865, 1162, 1510
DraI	TTTAAA	1 cut(s)	1297
EaeI	YGGCCR	1 cut(s)	1120
Ecl136II	GAGCTC	1 cut(s)	1523
Eco130I	CCWWGG	2 cut(s)	602, 977
Eco147I	AGGCCT	2 cut(s)	514, 1390
Eco24I	GRGCYC	1 cut(s)	1525
Eco31I	GGTCTC	1 cut(s)	1301
Eco53kI	GAGCTC	1 cut(s)	1523
Eco57I	CTGAAG	2 cut(s)	426, 1581
EcoICRI	GAGCTC	1 cut(s)	1523
EcoRII	CCWGG	3 cut(s)	916, 1036, 1084
EcoT14I	CCWWGG	2 cut(s)	602, 977
EcoT38I	GRGCYC	1 cut(s)	1525
EgeI	GGCGCC	2 cut(s)	37, 88
EheI	GGCGCC	2 cut(s)	37, 88
ErhI	CCWWGG	2 cut(s)	602, 977
Esp3I	CGTCTC	2 cut(s)	5, 1131
FaeI	CATG	7 cut(s)	772, 818, 878, 925, 935, 981, 1673
FalI	AAGNNNNNCTT	2 cut(s)	933, 965
FaqI	GGGAC	2 cut(s)	1450, 1462
FatI	CATG	7 cut(s)	768, 814, 874, 921, 931, 977, 1669
FauI	CCCGC	2 cut(s)	328, 1066
Fnu4HI	GCNGC	8 cut(s)	23, 90, 333, 546, 687, 758, 773, 1628
FokI	GGATG	7 cut(s)	64, 299, 548, 1068, 1256, 1301, 1556
FriOI	GRGCYC	1 cut(s)	1525
Fsp4HI	GCNGC	8 cut(s)	23, 90, 333, 546, 687, 758, 773, 1628
FspBI	CTAG	1 cut(s)	1068
GlaI	GCGC	3 cut(s)	37, 88, 1066
GluI	GCNGC	8 cut(s)	23, 90, 333, 546, 687, 758, 773, 1628
GsaI	CCCAGC	1 cut(s)	1096
HaeII	RGCGCY	3 cut(s)	39, 90, 1068
HaeIII	GGCC	4 cut(s)	514, 1006, 1122, 1390
HapII	CCGG	4 cut(s)	257, 596, 1062, 1187
HgaI	GACGC	3 cut(s)	22, 83, 129
HhaI	GCGC	3 cut(s)	38, 89, 1067
Hin1I	GRCGYC	4 cut(s)	36, 87, 121, 180
Hin1II	CATG	7 cut(s)	772, 818, 878, 925, 935, 981, 1673
Hin6I	GCGC	3 cut(s)	36, 87, 1065
HinP1I	GCGC	3 cut(s)	36, 87, 1065
HindIII	AAGCTT	2 cut(s)	156, 464
HinfI	GANTC	6 cut(s)	61, 148, 395, 401, 1041, 1453
HpaII	CCGG	4 cut(s)	257, 596, 1062, 1187
HphI	GGTGA	2 cut(s)	875, 1223
Hpy166II	GTNNAC	2 cut(s)	168, 641
Hpy188I	TCNGA	9 cut(s)	60, 73, 82, 129, 299, 400, 406, 585, 1527
Hpy188III	TCNNGA	7 cut(s)	97, 257, 310, 325, 368, 652, 674
Hpy8I	GTNNAC	2 cut(s)	168, 641
Hpy99I	CGWCG	8 cut(s)	44, 47, 77, 86, 123, 129, 191, 477
HpyAV	CCTTC	6 cut(s)	196, 365, 382, 872, 1370, 1697
HpyCH4III	ACNGT	1 cut(s)	592
HpyCH4IV	ACGT	4 cut(s)	180, 472, 643, 1140
HpyCH4V	TGCA	8 cut(s)	488, 509, 539, 545, 689, 772, 814, 994
HpyF10VI	GCNNNNNNNGC	9 cut(s)	22, 44, 120, 545, 757, 922, 1387, 1529, 1636
HpyF3I	CTNAG	6 cut(s)	162, 267, 397, 840, 1517, 1524
HpySE526I	ACGT	4 cut(s)	180, 472, 643, 1140
Hsp92I	GRCGYC	4 cut(s)	36, 87, 121, 180
Hsp92II	CATG	7 cut(s)	772, 818, 878, 925, 935, 981, 1673
HspAI	GCGC	3 cut(s)	36, 87, 1065
KasI	GGCGCC	2 cut(s)	35, 86
Kpn2I	TCCGGA	1 cut(s)	256
KroI	GCCGGC	1 cut(s)	1061
KroNI	GCCGGC	1 cut(s)	1063
Kzo9I	GATC	7 cut(s)	55, 214, 501, 550, 865, 1162, 1510
LguI	GCTCTTC	1 cut(s)	1176
LmnI	GCTCC	7 cut(s)	30, 374, 973, 1054, 1378, 1496, 1666
Lsp1109I	GCAGC	7 cut(s)	34, 319, 557, 673, 769, 784, 1614
LweI	GCATC	3 cut(s)	86, 526, 808
MaeI	CTAG	1 cut(s)	1068
MaeII	ACGT	4 cut(s)	180, 472, 643, 1140
MaeIII	GTNAC	5 cut(s)	176, 927, 1315, 1546, 1652
MalI	GATC	7 cut(s)	57, 216, 503, 552, 867, 1164, 1512
MboI	GATC	7 cut(s)	55, 214, 501, 550, 865, 1162, 1510
MflI	RGATCY	2 cut(s)	501, 1510
MhlI	GDGCHC	2 cut(s)	970, 1525
MlsI	TGGCCA	1 cut(s)	1122
MluNI	TGGCCA	1 cut(s)	1122
Mly113I	GGCGCC	2 cut(s)	36, 87
MlyI	GAGTC	3 cut(s)	389, 1035, 1447
MmeI	TCCRAC	4 cut(s)	96, 105, 107, 1579
Mox20I	TGGCCA	1 cut(s)	1122
MreI	CGCCGGCG	1 cut(s)	1061
MroI	TCCGGA	1 cut(s)	256
MroNI	GCCGGC	1 cut(s)	1061
MroXI	GAANNNNTTC	1 cut(s)	252
MscI	TGGCCA	1 cut(s)	1122
MseI	TTAA	3 cut(s)	902, 1296, 1734
MslI	CAYNNNNRTG	4 cut(s)	989, 1086, 1209, 1461
Msp20I	TGGCCA	1 cut(s)	1122
MspA1I	CMGCKG	1 cut(s)	548
MspI	CCGG	4 cut(s)	257, 596, 1062, 1187
MspR9I	CCNGG	3 cut(s)	918, 1038, 1086
MvaI	CCWGG	3 cut(s)	918, 1038, 1086
MwoI	GCNNNNNNNGC	9 cut(s)	22, 44, 120, 545, 757, 922, 1387, 1529, 1636
NaeI	GCCGGC	1 cut(s)	1063
NarI	GGCGCC	2 cut(s)	36, 87
NcoI	CCATGG	1 cut(s)	977
NdeII	GATC	7 cut(s)	55, 214, 501, 550, 865, 1162, 1510
NgoMIV	GCCGGC	1 cut(s)	1061
NheI	GCTAGC	1 cut(s)	1067
NlaIII	CATG	7 cut(s)	772, 818, 878, 925, 935, 981, 1673
NlaIV	GGNNCC	6 cut(s)	37, 88, 376, 600, 614, 1380
NmeAIII	GCCGAG	1 cut(s)	34
NmuCI	GTSAC	4 cut(s)	176, 927, 1546, 1652
NspI	RCATGY	2 cut(s)	772, 925
PaeI	GCATGC	2 cut(s)	772, 925
PceI	AGGCCT	2 cut(s)	514, 1390
PciSI	GCTCTTC	1 cut(s)	1176
PcsI	WCGNNNNNNNCGW	4 cut(s)	39, 51, 90, 1146
PdiI	GCCGGC	1 cut(s)	1063
PdmI	GAANNNNTTC	1 cut(s)	252
PfeI	GAWTC	3 cut(s)	61, 148, 401
PflFI	GACNNNGTC	1 cut(s)	123
PflMI	CCANNNNNTGG	1 cut(s)	1133
PinAI	ACCGGT	1 cut(s)	595
PkrI	GCNGC	8 cut(s)	24, 91, 334, 547, 688, 759, 774, 1629
PleI	GAGTC	3 cut(s)	389, 1035, 1447
PluTI	GGCGCC	2 cut(s)	39, 90
PpsI	GAGTC	3 cut(s)	389, 1035, 1447
Psp124BI	GAGCTC	1 cut(s)	1525
Psp6I	CCWGG	3 cut(s)	916, 1036, 1084
PspFI	CCCAGC	1 cut(s)	1092
PspGI	CCWGG	3 cut(s)	916, 1036, 1084
PspN4I	GGNNCC	6 cut(s)	37, 88, 376, 600, 614, 1380
PspPI	GGNCC	1 cut(s)	1004
PstI	CTGCAG	1 cut(s)	547
PstNI	CAGNNNCTG	2 cut(s)	404, 811
PsuI	RGATCY	2 cut(s)	501, 1510
PsyI	GACNNNGTC	1 cut(s)	123
PvuII	CAGCTG	1 cut(s)	548
RsaI	GTAC	4 cut(s)	594, 833, 872, 1404
RsaNI	GTAC	4 cut(s)	593, 832, 871, 1403
RseI	CAYNNNNRTG	4 cut(s)	989, 1086, 1209, 1461
SacI	GAGCTC	1 cut(s)	1525
SapI	GCTCTTC	1 cut(s)	1176
SaqAI	TTAA	3 cut(s)	902, 1296, 1734
SatI	GCNGC	8 cut(s)	23, 90, 333, 546, 687, 758, 773, 1628
Sau3AI	GATC	7 cut(s)	55, 214, 501, 550, 865, 1162, 1510
Sau96I	GGNCC	1 cut(s)	1004
ScaI	AGTACT	1 cut(s)	1404
SchI	GAGTC	3 cut(s)	389, 1035, 1447
ScrFI	CCNGG	3 cut(s)	918, 1038, 1086
SduI	GDGCHC	2 cut(s)	970, 1525
SfaNI	GCATC	3 cut(s)	86, 526, 808
SfcI	CTRYAG	1 cut(s)	543
SfoI	GGCGCC	2 cut(s)	37, 88
SgrAI	CRCCGGYG	1 cut(s)	1061
SmiMI	CAYNNNNRTG	4 cut(s)	989, 1086, 1209, 1461
SmlI	CTYRAG	1 cut(s)	366
SmoI	CTYRAG	1 cut(s)	366
SphI	GCATGC	2 cut(s)	772, 925
SseBI	AGGCCT	2 cut(s)	514, 1390
SsiI	CCGC	4 cut(s)	90, 171, 335, 1059
SspDI	GGCGCC	2 cut(s)	35, 86
SspMI	CTAG	1 cut(s)	1068
SstI	GAGCTC	1 cut(s)	1525
StuI	AGGCCT	2 cut(s)	514, 1390
StyD4I	CCNGG	3 cut(s)	916, 1036, 1084
StyI	CCWWGG	2 cut(s)	602, 977
TaaI	ACNGT	1 cut(s)	592
TaiI	ACGT	4 cut(s)	183, 475, 646, 1143
TaqI	TCGA	7 cut(s)	104, 246, 309, 342, 475, 651, 1712
TaqII	GACCGA	1 cut(s)	1325
TatI	WGTACW	1 cut(s)	1402
TauI	GCSGC	1 cut(s)	92
TfiI	GAWTC	3 cut(s)	61, 148, 401
Tru1I	TTAA	3 cut(s)	902, 1296, 1734
Tru9I	TTAA	3 cut(s)	902, 1296, 1734
TscAI	CASTG	2 cut(s)	181, 1657
TseFI	GTSAC	4 cut(s)	176, 927, 1546, 1652
TseI	GCWGC	7 cut(s)	22, 332, 545, 686, 757, 772, 1627
Tsp45I	GTSAC	4 cut(s)	176, 927, 1546, 1652
TspDTI	ATGAA	8 cut(s)	291, 494, 670, 891, 926, 948, 1128, 1266
TspRI	CASTG	2 cut(s)	181, 1657
Tth111I	GACNNNGTC	1 cut(s)	123
Van91I	CCANNNNNTGG	1 cut(s)	1133
XapI	RAATTY	3 cut(s)	303, 314, 887
XceI	RCATGY	2 cut(s)	772, 925
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1130
XmnI	GAANNNNTTC	1 cut(s)	252
XspI	CTAG	1 cut(s)	1068
ZraI	GACGTC	1 cut(s)	181
ZrmI	AGTACT	1 cut(s)	1404

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.