Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0004036

Physical Location & Seq

Genomic Coordinates Forward (+)

26769439 .. 26774390

Gene Structure 4952 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g25110.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1830 bp

ATGGGCTATCAGATTGTGTACCCGCACAGCCACTCTGAGAGAGCCTCTTATTTCCTGTCGATTTGGTTTTCCGCTGTGCGCTTCCGATCCCGAACCATGACTGCGGAGGTTCTCTCGCAGCCAAACGGCGTCGTCGCGAACGGCGACCTGAACGGAATCACTAACAACAACGCCGCCGCTGCCGCCAAGAAGTCGAGGGAGAGCGAGCGACGCCGTCGCAGGAGAAAGCAGAAGAAGAACAACAAAGCCTCTCAGGCGCCGGAGTCCAGCGCCGGCGAGACTGACGATGACGTCAAGGAGAATAATGATACTCAGCAGATTATTGAGCAAGTTCAAATTGAATATGTTCCAGAGAAACCTGAGTTAATTGATGGCATGGATGAGGAATTCAGAAAAATTTTCGAGAAATTCTCCTTCCAGGACTCTGAGGGTGTTGAGGTGGATAAGAAGGATGAGTCTGAAGGAGTCCCCAAAAAGAAGGCTGACTCAGATTCTGAAGAGGAAGAGCAGGATAATGAACAAAAAGAGAGAGGAATATCAAACAAGAAGAAAAAGCTTCAGCGGAGAATGAAGATTGCAGAATTGAAACAGATTTGCCAAAGGCCTGATGTTGTTGAGGTGTGGGATGCAACTGCAGCTGATCCTAAGCTACTGGTGTTTCTAAAATCATATCGCAATACTGTACCTGTGCCAAGACATTGGTGTCAGAAAAGGAAATTTCTGCAGGGTAAACGTGGTATTGAGAAACAACCGTTTCAGCTTCCAGACTTCATTGCTGCTACAGGAATTGAGAAAATTAGACAGGCATACATTGAAAAAGAAGATAGCAAGAAGTTGAAGCAAAAACAACGGGAGCGTATGCAACCAAAGATGGGGAAAATGGATATCGATTATCAGGTTCTCCATGATGCATTTTTCAAGTACCAGACTAAGCCAAAGTTGACAACTCTTGGTGATCTGTACCATGAAGGGAAGGAATTTGAGGTGAAATTGAGGGAGATGAAACCAGGCATGCTTTCACATGAACTAAAAGAAGCTCTGGGTATGCCAGATGGTGCTCCTCCCCCATGGCTCATCAATATGCAGAGATATGGTCCTCCACCATCATATCCACATCTGAAAATTCCCGGGTTGAATGCTCCTATCCCTCCTGGAGCCAGCTTTGGGTACCATCCTGGTGGCTGGGGAAAGCCTCCTGTTGATGAATATGGCCAACCGTTGTATGGAGATGTATTTGGCGTTCAGCAACAAGATCAGCCCAATTATGAGGAGGAGCCTGTTGACAAGACAAAGCATTGGGGTGATTTGGAGGAAGAGGAAGAGGAGGAGGAAGAAGAAGAAGAGGAAGAGGAAGAACAGCCTGAGGACGAAGATTTAGAGGATGGCATTCAATCTGTAGACAGCATGTCAAGTACTCCCACTGGCGTTGAGACACCTGCTCAAATTGAACTTCGCAAGGATCAGAAAAAAGAACCTGAAAAGCCTTTATACCAAGTACTTGAACAAAAAGAGGAAAGAATTGCTCCCGGGACACTTCTTGCAACGGGTCACACGTATAATTTGAGTGGCACCCAAGACAAAGCAGGGGCAAAAAAGGTTGAGCTGCTTAGAGGTCAGAAAGCAGATAAGGTGGAGGTCACTATACAACCCGAAGAATTGGATGATATGGAGACCGTTTTGCCTGCAAAGTATGAAGAAGCGAGGGAGGAGGAGAAGCTGCGAAGTCAGAAGGAAGATTTCAGCGACATGGTCGCAGAGAACGAGAAGAAGAGGAAACGTAAAATGCAAGAGAAAGAAGGTAAAAACAAGAAGAGGGACTTCAAGTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005686 GO:0005689 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0030532 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0070013 GO:0071011 GO:0071013 GO:0071704 GO:0090304 GO:0097525 GO:0120114 GO:1901360 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DUF382 PSP

Protein Analysis

610

Amino Acids

70.24

Weight (kDa)

5.32

Isoelectric Point (pI)

59.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004036)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11520 AT4G21660 AT4G21660 AT4G21660
fragaria_vesca	FvH4_3g04740 FvH4_6g45300
malus_domestica	MD05G1318200.v1.1 MD10G1297600.v1.1
prunus_persica	Prupe.4G042600_v2.0.a1 Prupe.4G042600_v2.0.a1
pyrus_communis	pycom05g29460 pycom10g25110
rosa_chinensis	RchiOBHm_Chr2g0163041 RchiOBHm_Chr5g0007761
rosa_laevigata	RLG00000021367 RLG00000031486
rosa_multiflora	Rmu_co8286435.1_g000001 Rmu_co8351911.1_g000001 Rmu_sc0005098.1_g000019 Rmu_sc0007039.1_g000007
rosa_roxburghii	Rroxscaffold_1G00068650 Rroxscaffold_2G00087600
rosa_rugosa	Rorug02G0500000.1 Rorug04G0430100
rosa_samantha	Rh2AG566300 Rh2BG578600 Rh2CG548500 Rh5AG058500 Rh5BG055300 Rh5CG065100 Rh5DG054300
rosa_wichuraiana	Rw2G046870 Rw5G006120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1444
AasI	GACNNNNNNGTC	2 cut(s)	290, 702
AatII	GACGTC	1 cut(s)	294
Acc36I	ACCTGC	1 cut(s)	1444
Acc65I	GGTACC	1 cut(s)	1167
AccB1I	GGYRCC	3 cut(s)	256, 1167, 1568
AccI	GTMKAC	1 cut(s)	1398
AccII	CGCG	1 cut(s)	137
AciI	CCGC	7 cut(s)	23, 72, 104, 174, 177, 183, 562
AclWI	GGATC	3 cut(s)	81, 635, 1467
AcoI	YGGCCR	1 cut(s)	1210
AcsI	RAATTY	6 cut(s)	386, 396, 407, 716, 977, 1122
AcuI	CTGAAG	3 cut(s)	480, 516, 542
AcyI	GRCGYC	4 cut(s)	129, 211, 257, 291
AfaI	GTAC	7 cut(s)	20, 684, 923, 962, 1169, 1414, 1497
AfiI	CCNNNNNNNGG	3 cut(s)	872, 1164, 1223
AflIII	ACRYGT	1 cut(s)	1551
AhdI	GACNNNNNGTC	1 cut(s)	1405
AjnI	CCWGG	4 cut(s)	417, 1006, 1150, 1174
AluBI	AGCT	8 cut(s)	556, 638, 649, 760, 1037, 1161, 1603, 1717
AluI	AGCT	8 cut(s)	556, 638, 649, 760, 1037, 1161, 1603, 1717
Alw21I	GWGCWC	1 cut(s)	1060
Alw26I	GTCTC	3 cut(s)	272, 1424, 1664
AlwI	GGATC	3 cut(s)	81, 635, 1467
AlwNI	CAGNNNCTG	1 cut(s)	494
Ama87I	CYCGRG	2 cut(s)	1127, 1526
AoxI	GGCC	2 cut(s)	602, 1210
ApeKI	GCWGC	6 cut(s)	118, 179, 635, 776, 1603, 1717
ApoI	RAATTY	6 cut(s)	386, 396, 407, 716, 977, 1122
Asp700I	GAANNNNTTC	1 cut(s)	345
Asp718I	GGTACC	1 cut(s)	1167
AspLEI	GCGC	3 cut(s)	81, 259, 272
AspS9I	GGNCC	1 cut(s)	1094
AsuC2I	CCSGG	4 cut(s)	1128, 1129, 1527, 1528
AsuHPI	GGTGA	3 cut(s)	965, 997, 1313
AvaI	CYCGRG	2 cut(s)	1127, 1526
AvaII	GGWCC	1 cut(s)	1094
AxyI	CCTNAGG	1 cut(s)	1362
BalI	TGGCCA	1 cut(s)	1212
BanI	GGYRCC	3 cut(s)	256, 1167, 1568
Bbv12I	GWGCWC	1 cut(s)	1060
BbvI	GCAGC	6 cut(s)	130, 166, 647, 763, 1590, 1704
BccI	CCATC	6 cut(s)	365, 865, 1046, 1111, 1179, 1376
BceAI	ACGGC	3 cut(s)	142, 157, 198
BciT130I	CCWGG	4 cut(s)	419, 1008, 1152, 1176
BcnI	CCSGG	4 cut(s)	1128, 1129, 1527, 1528
BcoDI	GTCTC	3 cut(s)	272, 1424, 1664
BfmI	CTRYAG	4 cut(s)	633, 722, 780, 1395
BfoI	RGCGCY	2 cut(s)	260, 273
BfuAI	ACCTGC	1 cut(s)	1444
BglI	GCCNNNNNGGC	1 cut(s)	254
BisI	GCNGC	9 cut(s)	119, 174, 177, 180, 183, 636, 777, 1604, 1718
BlsI	GCNGC	9 cut(s)	120, 175, 178, 181, 184, 637, 778, 1605, 1719
BmcAI	AGTACT	2 cut(s)	1414, 1497
Bme1390I	CCNGG	8 cut(s)	419, 1008, 1128, 1129, 1152, 1176, 1527, 1528
Bme18I	GGWCC	1 cut(s)	1094
BmeRI	GACNNNNNGTC	1 cut(s)	1405
BmeT110I	CYCGRG	2 cut(s)	1127, 1526
BmgT120I	GGNCC	1 cut(s)	1094
BmiI	GGNNCC	5 cut(s)	258, 1156, 1169, 1275, 1570
BmrFI	CCNGG	8 cut(s)	419, 1008, 1128, 1129, 1152, 1176, 1527, 1528
BmsI	GCATC	2 cut(s)	616, 898
BplI	GAGNNNNNCTC	6 cut(s)	29, 61, 98, 130, 395, 427
BpmI	CTGGAG	1 cut(s)	1173
Bpu10I	CCTNAGC	1 cut(s)	645
BpuMI	CCSGG	4 cut(s)	1128, 1129, 1527, 1528
Bsa29I	ATCGAT	1 cut(s)	888
BsaAI	YACGTR	1 cut(s)	1554
BsaHI	GRCGYC	4 cut(s)	129, 211, 257, 291
BsaI	GGTCTC	1 cut(s)	1664
BsaJI	CCNNGG	3 cut(s)	1067, 1127, 1526
Bsc4I	CCNNNNNNNGG	3 cut(s)	872, 1164, 1223
Bse118I	RCCGGY	1 cut(s)	272
Bse1I	ACTGG	2 cut(s)	657, 1426
Bse21I	CCTNAGG	1 cut(s)	1362
Bse3DI	GCAATG	1 cut(s)	771
BseBI	CCWGG	4 cut(s)	419, 1008, 1152, 1176
BseCI	ATCGAT	1 cut(s)	888
BseDI	CCNNGG	3 cut(s)	1067, 1127, 1526
BseGI	GGATG	6 cut(s)	385, 457, 631, 1171, 1387, 1666
BseLI	CCNNNNNNNGG	3 cut(s)	872, 1164, 1223
BseMI	GCAATG	1 cut(s)	771
BseMII	CTCAG	7 cut(s)	27, 266, 326, 351, 417, 501, 1353
BseNI	ACTGG	2 cut(s)	657, 1426
BseRI	GAGGAG	7 cut(s)	1050, 1283, 1286, 1337, 1340, 1721, 1724
BseXI	GCAGC	6 cut(s)	130, 166, 647, 763, 1590, 1704
BseYI	CCCAGC	1 cut(s)	1182
Bsh1236I	CGCG	1 cut(s)	137
BshFI	GGCC	2 cut(s)	604, 1212
BshNI	GGYRCC	3 cut(s)	256, 1167, 1568
BshVI	ATCGAT	1 cut(s)	888
BsiHKAI	GWGCWC	1 cut(s)	1060
BsiHKCI	CYCGRG	2 cut(s)	1127, 1526
BsiSI	CCGG	4 cut(s)	260, 273, 1128, 1527
BslFI	GGGAC	2 cut(s)	452, 1543
BslI	CCNNNNNNNGG	3 cut(s)	872, 1164, 1223
BsmAI	GTCTC	3 cut(s)	272, 1424, 1664
BsmFI	GGGAC	2 cut(s)	452, 1543
BsmI	GAATGC	2 cut(s)	1141, 1386
BsnI	GGCC	2 cut(s)	604, 1212
Bso31I	GGTCTC	1 cut(s)	1664
BsoBI	CYCGRG	2 cut(s)	1127, 1526
Bsp1286I	GDGCHC	1 cut(s)	1060
Bsp143I	GATC	5 cut(s)	86, 640, 955, 1252, 1459
Bsp19I	CCATGG	1 cut(s)	1067
Bsp68I	TCGCGA	1 cut(s)	137
BspACI	CCGC	7 cut(s)	23, 72, 104, 174, 177, 183, 562
BspANI	GGCC	2 cut(s)	604, 1212
BspCNI	CTCAG	7 cut(s)	28, 265, 325, 352, 418, 500, 1354
BspDI	ATCGAT	1 cut(s)	888
BspFNI	CGCG	1 cut(s)	137
BspLI	GGNNCC	5 cut(s)	258, 1156, 1169, 1275, 1570
BspMAI	CTGCAG	2 cut(s)	637, 726
BspMI	ACCTGC	1 cut(s)	1444
BspPI	GGATC	3 cut(s)	81, 635, 1467
BspQI	GCTCTTC	1 cut(s)	498
BspT107I	GGYRCC	3 cut(s)	256, 1167, 1568
BspTNI	GGTCTC	1 cut(s)	1664
BsrDI	GCAATG	1 cut(s)	771
BsrFI	RCCGGY	1 cut(s)	272
BsrI	ACTGG	2 cut(s)	657, 1426
BssAI	RCCGGY	1 cut(s)	272
BssECI	CCNNGG	3 cut(s)	1067, 1127, 1526
BssMI	GATC	5 cut(s)	86, 640, 955, 1252, 1459
BssNI	GRCGYC	4 cut(s)	129, 211, 257, 291
BssT1I	CCWWGG	1 cut(s)	1067
Bst2UI	CCWGG	4 cut(s)	419, 1008, 1152, 1176
Bst4CI	ACNGT	4 cut(s)	682, 753, 1218, 1675
Bst6I	CTCTTC	8 cut(s)	492, 498, 1308, 1314, 1335, 1341, 1763, 1805
BstACI	GRCGYC	4 cut(s)	129, 211, 257, 291
BstBAI	YACGTR	1 cut(s)	1554
BstC8I	GCNNGC	5 cut(s)	206, 274, 1013, 1159, 1683
BstDSI	CCRYGG	1 cut(s)	1067
BstF5I	GGATG	6 cut(s)	385, 457, 631, 1171, 1387, 1666
BstFNI	CGCG	1 cut(s)	137
BstH2I	RGCGCY	2 cut(s)	260, 273
BstHHI	GCGC	3 cut(s)	81, 259, 272
BstKTI	GATC	5 cut(s)	89, 643, 958, 1255, 1462
BstMAI	GTCTC	3 cut(s)	272, 1424, 1664
BstMBI	GATC	5 cut(s)	86, 640, 955, 1252, 1459
BstMWI	GCNNNNNNNGC	5 cut(s)	179, 182, 210, 254, 635
BstNI	CCWGG	4 cut(s)	419, 1008, 1152, 1176
BstNSI	RCATGY	2 cut(s)	1015, 1408
BstSCI	CCNGG	8 cut(s)	417, 1006, 1126, 1127, 1150, 1174, 1525, 1526
BstSFI	CTRYAG	4 cut(s)	633, 722, 780, 1395
BstUI	CGCG	1 cut(s)	137
BstV1I	GCAGC	6 cut(s)	130, 166, 647, 763, 1590, 1704
BstXI	CCANNNNNNTGG	2 cut(s)	699, 1178
Bsu15I	ATCGAT	1 cut(s)	888
Bsu36I	CCTNAGG	1 cut(s)	1362
BsuRI	GGCC	2 cut(s)	604, 1212
BsuTUI	ATCGAT	1 cut(s)	888
BtgI	CCRYGG	1 cut(s)	1067
BtsCI	GGATG	6 cut(s)	385, 457, 631, 1171, 1387, 1666
BtsIMutI	CAGTG	1 cut(s)	1419
BtuMI	TCGCGA	1 cut(s)	137
BveI	ACCTGC	1 cut(s)	1444
Cac8I	GCNNGC	5 cut(s)	206, 274, 1013, 1159, 1683
CaiI	CAGNNNCTG	1 cut(s)	494
CfoI	GCGC	3 cut(s)	81, 259, 272
Cfr10I	RCCGGY	1 cut(s)	272
Cfr13I	GGNCC	1 cut(s)	1094
Cfr9I	CCCGGG	2 cut(s)	1127, 1526
ClaI	ATCGAT	1 cut(s)	888
CseI	GACGC	2 cut(s)	118, 219
Csp6I	GTAC	7 cut(s)	19, 683, 922, 961, 1168, 1413, 1496
CspCI	CAANNNNNGTGG	2 cut(s)	1408, 1443
CviAII	CATG	9 cut(s)	97, 376, 905, 965, 1012, 1022, 1068, 1405, 1747
CviQI	GTAC	7 cut(s)	19, 683, 922, 961, 1168, 1413, 1496
DinI	GGCGCC	1 cut(s)	258
DpnI	GATC	5 cut(s)	88, 642, 957, 1254, 1461
DpnII	GATC	5 cut(s)	86, 640, 955, 1252, 1459
DrdI	GACNNNNNNGTC	2 cut(s)	290, 702
DriI	GACNNNNNGTC	1 cut(s)	1405
DseDI	GACNNNNNNGTC	2 cut(s)	290, 702
EaeI	YGGCCR	1 cut(s)	1210
Eam1104I	CTCTTC	8 cut(s)	492, 498, 1308, 1314, 1335, 1341, 1763, 1805
Eam1105I	GACNNNNNGTC	1 cut(s)	1405
EarI	CTCTTC	8 cut(s)	492, 498, 1308, 1314, 1335, 1341, 1763, 1805
Eco130I	CCWWGG	1 cut(s)	1067
Eco147I	AGGCCT	1 cut(s)	604
Eco31I	GGTCTC	1 cut(s)	1664
Eco32I	GATATC	1 cut(s)	886
Eco47I	GGWCC	1 cut(s)	1094
Eco57I	CTGAAG	3 cut(s)	480, 516, 542
Eco81I	CCTNAGG	1 cut(s)	1362
Eco88I	CYCGRG	2 cut(s)	1127, 1526
EcoRI	GAATTC	1 cut(s)	386
EcoRII	CCWGG	4 cut(s)	417, 1006, 1150, 1174
EcoRV	GATATC	1 cut(s)	886
EcoT14I	CCWWGG	1 cut(s)	1067
EcoT22I	ATGCAT	1 cut(s)	913
EgeI	GGCGCC	1 cut(s)	258
EheI	GGCGCC	1 cut(s)	258
ErhI	CCWWGG	1 cut(s)	1067
FaeI	CATG	9 cut(s)	100, 379, 908, 968, 1015, 1025, 1071, 1408, 1750
FalI	AAGNNNNNCTT	1 cut(s)	1802
FaqI	GGGAC	2 cut(s)	452, 1543
FatI	CATG	9 cut(s)	96, 375, 904, 964, 1011, 1021, 1067, 1404, 1746
FauI	CCCGC	1 cut(s)	30
FblI	GTMKAC	1 cut(s)	1398
Fnu4HI	GCNGC	9 cut(s)	119, 174, 177, 180, 183, 636, 777, 1604, 1718
FokI	GGATG	6 cut(s)	392, 464, 638, 1158, 1394, 1673
Fsp4HI	GCNGC	9 cut(s)	119, 174, 177, 180, 183, 636, 777, 1604, 1718
GlaI	GCGC	3 cut(s)	80, 258, 271
GluI	GCNGC	9 cut(s)	119, 174, 177, 180, 183, 636, 777, 1604, 1718
GsaI	CCCAGC	1 cut(s)	1186
GsuI	CTGGAG	1 cut(s)	1173
HaeII	RGCGCY	2 cut(s)	260, 273
HaeIII	GGCC	2 cut(s)	604, 1212
HapII	CCGG	4 cut(s)	260, 273, 1128, 1527
HgaI	GACGC	2 cut(s)	118, 219
HhaI	GCGC	3 cut(s)	81, 259, 272
Hin1I	GRCGYC	4 cut(s)	129, 211, 257, 291
Hin1II	CATG	9 cut(s)	100, 379, 908, 968, 1015, 1025, 1071, 1408, 1750
Hin6I	GCGC	3 cut(s)	79, 257, 270
HinP1I	GCGC	3 cut(s)	79, 257, 270
HincII	GTYRAC	2 cut(s)	942, 1282
HindII	GTYRAC	2 cut(s)	942, 1282
HindIII	AAGCTT	1 cut(s)	554
HinfI	GANTC	7 cut(s)	156, 263, 422, 455, 465, 485, 491
HpaII	CCGG	4 cut(s)	260, 273, 1128, 1527
HphI	GGTGA	3 cut(s)	965, 997, 1313
Hpy166II	GTNNAC	5 cut(s)	19, 731, 942, 1282, 1399
Hpy188III	TCNNGA	5 cut(s)	90, 136, 350, 403, 764
Hpy8I	GTNNAC	5 cut(s)	19, 731, 942, 1282, 1399
Hpy99I	CGWCG	4 cut(s)	134, 137, 213, 219
HpyAV	CCTTC	8 cut(s)	424, 442, 455, 472, 962, 967, 1723, 1790
HpyCH4III	ACNGT	4 cut(s)	682, 753, 1218, 1675
HpyCH4IV	ACGT	4 cut(s)	291, 733, 1553, 1777
HpyF10VI	GCNNNNNNNGC	5 cut(s)	179, 182, 210, 254, 635
HpySE526I	ACGT	4 cut(s)	291, 733, 1553, 1777
Hsp92I	GRCGYC	4 cut(s)	129, 211, 257, 291
Hsp92II	CATG	9 cut(s)	100, 379, 908, 968, 1015, 1025, 1071, 1408, 1750
HspAI	GCGC	3 cut(s)	79, 257, 270
KasI	GGCGCC	1 cut(s)	256
KpnI	GGTACC	1 cut(s)	1171
KroI	GCCGGC	1 cut(s)	272
KroNI	GCCGGC	1 cut(s)	274
Kzo9I	GATC	5 cut(s)	86, 640, 955, 1252, 1459
LguI	GCTCTTC	1 cut(s)	498
LmnI	GCTCC	6 cut(s)	853, 1063, 1144, 1154, 1273, 1528
Lsp1109I	GCAGC	6 cut(s)	130, 166, 647, 763, 1590, 1704
LweI	GCATC	2 cut(s)	616, 898
MaeII	ACGT	4 cut(s)	291, 733, 1553, 1777
MaeIII	GTNAC	2 cut(s)	1547, 1636
MalI	GATC	5 cut(s)	88, 642, 957, 1254, 1461
MboI	GATC	5 cut(s)	86, 640, 955, 1252, 1459
MhlI	GDGCHC	1 cut(s)	1060
MlsI	TGGCCA	1 cut(s)	1212
MluNI	TGGCCA	1 cut(s)	1212
Mly113I	GGCGCC	1 cut(s)	257
MlyI	GAGTC	5 cut(s)	272, 416, 464, 474, 479
Mox20I	TGGCCA	1 cut(s)	1212
Mph1103I	ATGCAT	1 cut(s)	913
MreI	CGCCGGCG	1 cut(s)	272
MroNI	GCCGGC	1 cut(s)	272
MroXI	GAANNNNTTC	1 cut(s)	345
MscI	TGGCCA	1 cut(s)	1212
MseI	TTAA	1 cut(s)	365
MslI	CAYNNNNRTG	3 cut(s)	1079, 1176, 1299
Msp20I	TGGCCA	1 cut(s)	1212
MspA1I	CMGCKG	4 cut(s)	74, 179, 562, 638
MspI	CCGG	4 cut(s)	260, 273, 1128, 1527
MspR9I	CCNGG	8 cut(s)	419, 1008, 1128, 1129, 1152, 1176, 1527, 1528
Mva1269I	GAATGC	2 cut(s)	1141, 1386
MvaI	CCWGG	4 cut(s)	419, 1008, 1152, 1176
MvnI	CGCG	1 cut(s)	137
MwoI	GCNNNNNNNGC	5 cut(s)	179, 182, 210, 254, 635
NaeI	GCCGGC	1 cut(s)	274
NarI	GGCGCC	1 cut(s)	257
NciI	CCSGG	4 cut(s)	1128, 1129, 1527, 1528
NcoI	CCATGG	1 cut(s)	1067
NdeII	GATC	5 cut(s)	86, 640, 955, 1252, 1459
NgoMIV	GCCGGC	1 cut(s)	272
NlaIII	CATG	9 cut(s)	100, 379, 908, 968, 1015, 1025, 1071, 1408, 1750
NlaIV	GGNNCC	5 cut(s)	258, 1156, 1169, 1275, 1570
NmuCI	GTSAC	2 cut(s)	1547, 1636
NruI	TCGCGA	1 cut(s)	137
NsiI	ATGCAT	1 cut(s)	913
NspI	RCATGY	2 cut(s)	1015, 1408
PaeI	GCATGC	1 cut(s)	1015
PaqCI	CACCTGC	1 cut(s)	1444
PceI	AGGCCT	1 cut(s)	604
PciSI	GCTCTTC	1 cut(s)	498
PcsI	WCGNNNNNNNCGW	3 cut(s)	141, 1550, 1758
PctI	GAATGC	2 cut(s)	1141, 1386
PdiI	GCCGGC	1 cut(s)	274
PdmI	GAANNNNTTC	1 cut(s)	345
PfeI	GAWTC	2 cut(s)	156, 491
PflFI	GACNNNGTC	2 cut(s)	213, 1748
PfoI	TCCNGGA	2 cut(s)	417, 1150
PkrI	GCNGC	9 cut(s)	120, 175, 178, 181, 184, 637, 778, 1605, 1719
PleI	GAGTC	5 cut(s)	271, 416, 463, 473, 479
PluTI	GGCGCC	1 cut(s)	260
PpsI	GAGTC	5 cut(s)	271, 416, 463, 473, 479
Ppu21I	YACGTR	1 cut(s)	1554
Psp6I	CCWGG	4 cut(s)	417, 1006, 1150, 1174
PspFI	CCCAGC	1 cut(s)	1182
PspGI	CCWGG	4 cut(s)	417, 1006, 1150, 1174
PspN4I	GGNNCC	5 cut(s)	258, 1156, 1169, 1275, 1570
PspPI	GGNCC	1 cut(s)	1094
PsrI	GAACNNNNNNTAC	2 cut(s)	1224, 1256
PstI	CTGCAG	2 cut(s)	637, 726
PstNI	CAGNNNCTG	1 cut(s)	494
PsyI	GACNNNGTC	2 cut(s)	213, 1748
PvuII	CAGCTG	1 cut(s)	638
RruI	TCGCGA	1 cut(s)	137
RsaI	GTAC	7 cut(s)	20, 684, 923, 962, 1169, 1414, 1497
RsaNI	GTAC	7 cut(s)	19, 683, 922, 961, 1168, 1413, 1496
RseI	CAYNNNNRTG	3 cut(s)	1079, 1176, 1299
SapI	GCTCTTC	1 cut(s)	498
SaqAI	TTAA	1 cut(s)	365
SatI	GCNGC	9 cut(s)	119, 174, 177, 180, 183, 636, 777, 1604, 1718
Sau3AI	GATC	5 cut(s)	86, 640, 955, 1252, 1459
Sau96I	GGNCC	1 cut(s)	1094
ScaI	AGTACT	2 cut(s)	1414, 1497
SchI	GAGTC	5 cut(s)	272, 416, 464, 474, 479
ScrFI	CCNGG	8 cut(s)	419, 1008, 1128, 1129, 1152, 1176, 1527, 1528
SduI	GDGCHC	1 cut(s)	1060
SfaNI	GCATC	2 cut(s)	616, 898
SfcI	CTRYAG	4 cut(s)	633, 722, 780, 1395
SfoI	GGCGCC	1 cut(s)	258
SgrAI	CRCCGGYG	1 cut(s)	272
SinI	GGWCC	1 cut(s)	1094
SmaI	CCCGGG	2 cut(s)	1129, 1528
SmiMI	CAYNNNNRTG	3 cut(s)	1079, 1176, 1299
SphI	GCATGC	1 cut(s)	1015
SseBI	AGGCCT	1 cut(s)	604
SsiI	CCGC	7 cut(s)	23, 72, 104, 174, 177, 183, 562
SspDI	GGCGCC	1 cut(s)	256
StuI	AGGCCT	1 cut(s)	604
StyD4I	CCNGG	8 cut(s)	417, 1006, 1126, 1127, 1150, 1174, 1525, 1526
StyI	CCWWGG	1 cut(s)	1067
TaaI	ACNGT	4 cut(s)	682, 753, 1218, 1675
TaiI	ACGT	4 cut(s)	294, 736, 1556, 1780
TaqI	TCGA	4 cut(s)	59, 194, 402, 888
TatI	WGTACW	2 cut(s)	1412, 1495
TauI	GCSGC	3 cut(s)	176, 179, 185
TfiI	GAWTC	2 cut(s)	156, 491
Tru1I	TTAA	1 cut(s)	365
Tru9I	TTAA	1 cut(s)	365
TscAI	CASTG	1 cut(s)	1426
TseFI	GTSAC	2 cut(s)	1547, 1636
TseI	GCWGC	6 cut(s)	118, 179, 635, 776, 1603, 1717
Tsp45I	GTSAC	2 cut(s)	1547, 1636
TspDTI	ATGAA	8 cut(s)	531, 584, 760, 981, 1016, 1038, 1218, 1707
TspGWI	ACGGA	1 cut(s)	168
TspMI	CCCGGG	2 cut(s)	1127, 1526
TspRI	CASTG	1 cut(s)	1426
Tth111I	GACNNNGTC	2 cut(s)	213, 1748
VpaK11BI	GGWCC	1 cut(s)	1094
XapI	RAATTY	6 cut(s)	386, 396, 407, 716, 977, 1122
XceI	RCATGY	2 cut(s)	1015, 1408
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1220
XmaI	CCCGGG	2 cut(s)	1127, 1526
XmiI	GTMKAC	1 cut(s)	1398
XmnI	GAANNNNTTC	1 cut(s)	345
ZraI	GACGTC	1 cut(s)	292
ZrmI	AGTACT	2 cut(s)	1414, 1497
Zsp2I	ATGCAT	1 cut(s)	913

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.