Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0004036

Physical Location & Seq

Genomic Coordinates Forward (+)

29860717 .. 29866190

Gene Structure 5474 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g29460.19

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1938 bp

ATGCACTTGAGTTGTGCGCTTGGTTTGCGCATGACCCGTATTGACGATATATTCCCTACAAAATTGAAGCCCAATTATAGTAGCCTCTCACGTGCCAATTTCTTGGAATATATAAATATCATTCCCATTATCCGGTCACTAATTATCTTCCCAAACCACACCCTCTTTCCTCTCGATTTGGTTTTCGCTCTGCACTTCCGATCCGGAACCATGACTGCGGAGGTTCTCTCGCAGCCAAACGGCGTCGTTGCGAACGGCGACTTGAACGCAATCCCTACCAACAACGCCACCGCCGCCAAGAAGTCGAGGGAGAGCGAGCGACGCCGTCGCAGGAGAAAGCAAAAGAAGAACAACAAGGCCTCTCAGGCGCCGGAGTCCAGCGCCGGCGAGACCGACGATGACGTCAAGGAGAACAACGATCCTCAACAGATTATTGAGCAAGTTCAAATTGAATATGTTCCAGAGAAACCTGAGCTAAGTGATGGCATGGATGAGGAATTCAGAAAAATTTTCGAGAAATTCTGCTTCCAGGACTCCGTGGGTGTTGAGGAGGATAAGAAGGATGAGTCTGAAGGAGCCCCAAAAAAGAAGGCTGACTCAGATTCTGAAGAGGAAGAGCAGGATAATGAACAAAAAGAGAAAGGCATATCAAACAAGAAGAAAAAGCTTCAACGGAGAATGAAGATTGCCGAATTGAAACAGATCTGCCAAAGGCCTGATGTTGTTGAGGTGTGGGATGCAACTGCAGCTGATCCTAAGCTGCTGGTGTTTCTAAAATCATATCGCAATACTGTACCCGTGCCAAGACATTGGTGTCAGAAAAGGAAATTTCTACAGGGTAAACGTGGTATTGAGAAACAACCGTTTCAGCTTCCCGACTTCATTGCTGCTACGGGAATTGAGAAAATTAGACAGGCGTACATTGAAAAAGAAGATAGTAAGAAGTTGAAGCAAAAACAACGAGAGCGTATGCAACCAAAGATGGGGAAAATGGATATCGATTATCAGGTTCTCCATGATGCATTTTTCAAGTACCAGACTAAGCCAAAGTTGACGACTCTTGGTGATCTGTACCATGAAGGGAAGGAGTTTGAGGTGAAATTGAGGGAGATGAAACCAGGCATGCTTTCGCATGAACTAAAAGAAGCTCTGGGTATGCCAGATGGTGCTCCTCCACCATGGCTCATCAATATGCAGAGATATGGTCCTCCACCATCATATCCACATCTGAAAATTCCCGGGCTGAATGCTCCAATCCCACCTGGTGCTAGCTTTGGTTACCATCCTGGTGGCTGGGGAAAGCCTCCCGTTGATGAATATGGCCAACCGTTGTATGGGGATGTATTTGGCGTTCAGCAACAAGATCAGCCCAATTATGAGGAGGAGCCTGTTGACAAGACAAAGCATTGGGGTGATTTGGAGGAAGAGGAGGAGGAGGAGGAAGAAGAAGAGGAGGAAGAGGAAGAACAGCCTGAGGAAGAAGATTTAGAGGATGGCATTCAATCTGTAGACAGCCTCTCAAGTACTCCCACTGGCGTTGAGACACCTGCTCAAATTGAACTGCGCAAGGATCAGAAAAAAGAATCTGAAAAGCCTCTATACCAAGTACTTGAACAAAAAGAGGAAAGAATTGCTCCGGGGACACTTCTTGCAACGGGTCACACGTATAATTTGAGCGGCACCCAAGACAAAGCAGGGCCCAAAAAGGTTGAGCTACTTAGAGGTCAGAAAGCAGACAAAGTGGAGGTCACCATACAACCCGAAGAATTGGATGATATGGAGACCGTTTTGCCTGCAAAGTACGAAGAAGCAAGGGAGGAGGAGAAGCTGCGAAGTCAGAAGGAAGATTTCAGTGACATGGTCGCAGAGAACGAGAAGAAGAGGAAACGTAAGCAAGACAAGGAAGGGAAAAACAAGAAGAGGGACTTCAAGTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005686 GO:0005689 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0030532 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0070013 GO:0071011 GO:0071013 GO:0071704 GO:0090304 GO:0097525 GO:0120114 GO:1901360 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DUF382 PSP

Protein Analysis

646

Amino Acids

74.19

Weight (kDa)

5.35

Isoelectric Point (pI)

60.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004036)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11520 AT4G21660 AT4G21660 AT4G21660
fragaria_vesca	FvH4_3g04740 FvH4_6g45300
malus_domestica	MD05G1318200.v1.1 MD10G1297600.v1.1
prunus_persica	Prupe.4G042600_v2.0.a1 Prupe.4G042600_v2.0.a1
pyrus_communis	pycom05g29460 pycom10g25110
rosa_chinensis	RchiOBHm_Chr2g0163041 RchiOBHm_Chr5g0007761
rosa_laevigata	RLG00000021367 RLG00000031486
rosa_multiflora	Rmu_co8286435.1_g000001 Rmu_co8351911.1_g000001 Rmu_sc0005098.1_g000019 Rmu_sc0007039.1_g000007
rosa_roxburghii	Rroxscaffold_1G00068650 Rroxscaffold_2G00087600
rosa_rugosa	Rorug02G0500000.1 Rorug04G0430100
rosa_samantha	Rh2AG566300 Rh2BG578600 Rh2CG548500 Rh5AG058500 Rh5BG055300 Rh5CG065100 Rh5DG054300
rosa_wichuraiana	Rw2G046870 Rw5G006120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1555
AasI	GACNNNNNNGTC	2 cut(s)	401, 813
AatII	GACGTC	1 cut(s)	405
Acc16I	TGCGCA	2 cut(s)	29, 1565
Acc36I	ACCTGC	1 cut(s)	1555
AccB1I	GGYRCC	2 cut(s)	367, 1679
AccBSI	CCGCTC	1 cut(s)	1677
AccI	GTMKAC	1 cut(s)	1509
AccIII	TCCGGA	1 cut(s)	203
AciI	CCGC	4 cut(s)	218, 291, 294, 1677
AclWI	GGATC	4 cut(s)	195, 413, 746, 1578
AcoI	YGGCCR	1 cut(s)	1321
AcsI	RAATTY	5 cut(s)	497, 507, 518, 827, 1233
AcuI	CTGAAG	2 cut(s)	591, 627
AcvI	CACGTG	1 cut(s)	92
AcyI	GRCGYC	4 cut(s)	243, 322, 368, 402
AdeI	CACNNNGTG	1 cut(s)	1265
AfaI	GTAC	7 cut(s)	795, 920, 1034, 1073, 1525, 1608, 1802
AfiI	CCNNNNNNNGG	3 cut(s)	132, 983, 1334
AflIII	ACRYGT	1 cut(s)	1662
AjnI	CCWGG	4 cut(s)	528, 1117, 1261, 1285
AluBI	AGCT	9 cut(s)	475, 667, 749, 760, 871, 1148, 1272, 1714, 1828
AluI	AGCT	9 cut(s)	475, 667, 749, 760, 871, 1148, 1272, 1714, 1828
Alw21I	GWGCWC	1 cut(s)	1171
Alw26I	GTCTC	3 cut(s)	383, 1535, 1775
AlwI	GGATC	4 cut(s)	195, 413, 746, 1578
AlwNI	CAGNNNCTG	1 cut(s)	605
Ama87I	CYCGRG	1 cut(s)	1238
Aor13HI	TCCGGA	1 cut(s)	203
AoxI	GGCC	4 cut(s)	357, 713, 1321, 1697
ApaI	GGGCCC	1 cut(s)	1701
ApeKI	GCWGC	5 cut(s)	232, 746, 760, 887, 1828
ApoI	RAATTY	5 cut(s)	497, 507, 518, 827, 1233
ArsI	GACNNNNNNTTYG	2 cut(s)	1731, 1763
Asp700I	GAANNNNTTC	1 cut(s)	456
AspLEI	GCGC	5 cut(s)	19, 30, 370, 383, 1566
AspS9I	GGNCC	3 cut(s)	1205, 1697, 1698
AsuC2I	CCSGG	3 cut(s)	1239, 1240, 1638
AsuHPI	GGTGA	4 cut(s)	1076, 1108, 1424, 1741
AsuNHI	GCTAGC	1 cut(s)	1268
AvaI	CYCGRG	1 cut(s)	1238
AvaII	GGWCC	1 cut(s)	1205
AxyI	CCTNAGG	1 cut(s)	1473
BaeGI	GKGCMC	1 cut(s)	1701
BalI	TGGCCA	1 cut(s)	1323
BanI	GGYRCC	2 cut(s)	367, 1679
BanII	GRGCYC	2 cut(s)	580, 1701
BbrPI	CACGTG	1 cut(s)	92
Bbv12I	GWGCWC	1 cut(s)	1171
BbvI	GCAGC	5 cut(s)	244, 747, 758, 874, 1815
BccI	CCATC	6 cut(s)	476, 976, 1157, 1222, 1290, 1487
BceAI	ACGGC	3 cut(s)	256, 271, 309
BcgI	CGANNNNNNTGC	2 cut(s)	866, 900
BciT130I	CCWGG	4 cut(s)	530, 1119, 1263, 1287
BcnI	CCSGG	3 cut(s)	1239, 1240, 1638
BcoDI	GTCTC	3 cut(s)	383, 1535, 1775
BfaI	CTAG	1 cut(s)	1269
BfmI	CTRYAG	3 cut(s)	744, 833, 1506
BfoI	RGCGCY	2 cut(s)	371, 384
BfuAI	ACCTGC	1 cut(s)	1555
BglI	GCCNNNNNGGC	1 cut(s)	365
BglII	AGATCT	1 cut(s)	702
BisI	GCNGC	7 cut(s)	233, 294, 747, 761, 888, 1678, 1829
BlsI	GCNGC	7 cut(s)	234, 295, 748, 762, 889, 1679, 1830
BmcAI	AGTACT	2 cut(s)	1525, 1608
Bme1390I	CCNGG	7 cut(s)	530, 1119, 1239, 1240, 1263, 1287, 1638
Bme18I	GGWCC	1 cut(s)	1205
BmeT110I	CYCGRG	1 cut(s)	1238
BmgT120I	GGNCC	3 cut(s)	1205, 1697, 1698
BmiI	GGNNCC	6 cut(s)	208, 369, 577, 1386, 1681, 1699
BmrFI	CCNGG	7 cut(s)	530, 1119, 1239, 1240, 1263, 1287, 1638
BmsI	GCATC	2 cut(s)	727, 1009
BmtI	GCTAGC	1 cut(s)	1272
BplI	GAGNNNNNCTC	2 cut(s)	212, 244
Bpu10I	CCTNAGC	2 cut(s)	471, 756
BpuEI	CTTGAG	2 cut(s)	28, 1504
BpuMI	CCSGG	3 cut(s)	1239, 1240, 1638
Bsa29I	ATCGAT	1 cut(s)	999
BsaAI	YACGTR	2 cut(s)	92, 1665
BsaHI	GRCGYC	4 cut(s)	243, 322, 368, 402
BsaI	GGTCTC	2 cut(s)	383, 1775
BsaJI	CCNNGG	4 cut(s)	537, 1178, 1238, 1637
BsaWI	WCCGGW	2 cut(s)	132, 203
Bsc4I	CCNNNNNNNGG	3 cut(s)	132, 983, 1334
Bse118I	RCCGGY	1 cut(s)	383
Bse1I	ACTGG	1 cut(s)	1537
Bse21I	CCTNAGG	1 cut(s)	1473
Bse3DI	GCAATG	1 cut(s)	882
BseAI	TCCGGA	1 cut(s)	203
BseBI	CCWGG	4 cut(s)	530, 1119, 1263, 1287
BseCI	ATCGAT	1 cut(s)	999
BseDI	CCNNGG	4 cut(s)	537, 1178, 1238, 1637
BseGI	GGATG	7 cut(s)	496, 568, 742, 1282, 1345, 1498, 1777
BseLI	CCNNNNNNNGG	3 cut(s)	132, 983, 1334
BseMI	GCAATG	1 cut(s)	882
BseMII	CTCAG	4 cut(s)	377, 462, 612, 1464
BseNI	ACTGG	1 cut(s)	1537
BseSI	GKGCMC	1 cut(s)	1701
BseXI	GCAGC	5 cut(s)	244, 747, 758, 874, 1815
BseYI	CCCAGC	1 cut(s)	1293
BsgI	GTGCAG	1 cut(s)	176
BshFI	GGCC	4 cut(s)	359, 715, 1323, 1699
BshNI	GGYRCC	2 cut(s)	367, 1679
BshVI	ATCGAT	1 cut(s)	999
BsiHKAI	GWGCWC	1 cut(s)	1171
BsiHKCI	CYCGRG	1 cut(s)	1238
BsiSI	CCGG	6 cut(s)	133, 204, 371, 384, 1239, 1637
BslFI	GGGAC	1 cut(s)	1654
BslI	CCNNNNNNNGG	3 cut(s)	132, 983, 1334
BsmAI	GTCTC	3 cut(s)	383, 1535, 1775
BsmFI	GGGAC	1 cut(s)	1654
BsmI	GAATGC	2 cut(s)	1252, 1497
BsnI	GGCC	4 cut(s)	359, 715, 1323, 1699
Bso31I	GGTCTC	2 cut(s)	383, 1775
BsoBI	CYCGRG	1 cut(s)	1238
Bsp120I	GGGCCC	1 cut(s)	1697
Bsp1286I	GDGCHC	3 cut(s)	580, 1171, 1701
Bsp13I	TCCGGA	1 cut(s)	203
Bsp143I	GATC	7 cut(s)	200, 418, 702, 751, 1066, 1363, 1570
Bsp19I	CCATGG	1 cut(s)	1178
BspACI	CCGC	4 cut(s)	218, 291, 294, 1677
BspANI	GGCC	4 cut(s)	359, 715, 1323, 1699
BspCNI	CTCAG	4 cut(s)	376, 463, 611, 1465
BspDI	ATCGAT	1 cut(s)	999
BspEI	TCCGGA	1 cut(s)	203
BspLI	GGNNCC	6 cut(s)	208, 369, 577, 1386, 1681, 1699
BspMAI	CTGCAG	1 cut(s)	748
BspMI	ACCTGC	1 cut(s)	1555
BspOI	GCTAGC	1 cut(s)	1272
BspPI	GGATC	4 cut(s)	195, 413, 746, 1578
BspQI	GCTCTTC	1 cut(s)	609
BspT107I	GGYRCC	2 cut(s)	367, 1679
BspTNI	GGTCTC	2 cut(s)	383, 1775
BsrBI	CCGCTC	1 cut(s)	1677
BsrDI	GCAATG	1 cut(s)	882
BsrFI	RCCGGY	1 cut(s)	383
BsrI	ACTGG	1 cut(s)	1537
BssAI	RCCGGY	1 cut(s)	383
BssECI	CCNNGG	4 cut(s)	537, 1178, 1238, 1637
BssMI	GATC	7 cut(s)	200, 418, 702, 751, 1066, 1363, 1570
BssNI	GRCGYC	4 cut(s)	243, 322, 368, 402
BssT1I	CCWWGG	1 cut(s)	1178
Bst2UI	CCWGG	4 cut(s)	530, 1119, 1263, 1287
Bst4CI	ACNGT	4 cut(s)	793, 864, 1329, 1786
Bst6I	CTCTTC	7 cut(s)	603, 609, 1419, 1443, 1452, 1874, 1913
BstACI	GRCGYC	4 cut(s)	243, 322, 368, 402
BstBAI	YACGTR	2 cut(s)	92, 1665
BstC8I	GCNNGC	5 cut(s)	317, 385, 1124, 1270, 1794
BstDEI	CTNAG	8 cut(s)	363, 471, 476, 598, 756, 1041, 1473, 1718
BstDSI	CCRYGG	2 cut(s)	537, 1178
BstEII	GGTNACC	2 cut(s)	1277, 1747
BstF5I	GGATG	7 cut(s)	496, 568, 742, 1282, 1345, 1498, 1777
BstH2I	RGCGCY	2 cut(s)	371, 384
BstHHI	GCGC	5 cut(s)	19, 30, 370, 383, 1566
BstKTI	GATC	7 cut(s)	203, 421, 705, 754, 1069, 1366, 1573
BstMAI	GTCTC	3 cut(s)	383, 1535, 1775
BstMBI	GATC	7 cut(s)	200, 418, 702, 751, 1066, 1363, 1570
BstMWI	GCNNNNNNNGC	5 cut(s)	25, 293, 321, 365, 746
BstNI	CCWGG	4 cut(s)	530, 1119, 1263, 1287
BstNSI	RCATGY	1 cut(s)	1126
BstPI	GGTNACC	2 cut(s)	1277, 1747
BstSCI	CCNGG	7 cut(s)	528, 1117, 1237, 1238, 1261, 1285, 1636
BstSFI	CTRYAG	3 cut(s)	744, 833, 1506
BstSLI	GKGCMC	1 cut(s)	1701
BstV1I	GCAGC	5 cut(s)	244, 747, 758, 874, 1815
BstX2I	RGATCY	1 cut(s)	702
BstXI	CCANNNNNNTGG	3 cut(s)	103, 810, 1289
BstYI	RGATCY	1 cut(s)	702
Bsu15I	ATCGAT	1 cut(s)	999
Bsu36I	CCTNAGG	1 cut(s)	1473
BsuRI	GGCC	4 cut(s)	359, 715, 1323, 1699
BsuTUI	ATCGAT	1 cut(s)	999
BtgI	CCRYGG	2 cut(s)	537, 1178
BtsCI	GGATG	7 cut(s)	496, 568, 742, 1282, 1345, 1498, 1777
BtsIMutI	CAGTG	2 cut(s)	1530, 1858
BveI	ACCTGC	1 cut(s)	1555
Cac8I	GCNNGC	5 cut(s)	317, 385, 1124, 1270, 1794
CaiI	CAGNNNCTG	1 cut(s)	605
CfoI	GCGC	5 cut(s)	19, 30, 370, 383, 1566
Cfr10I	RCCGGY	1 cut(s)	383
Cfr13I	GGNCC	3 cut(s)	1205, 1697, 1698
Cfr9I	CCCGGG	1 cut(s)	1238
ClaI	ATCGAT	1 cut(s)	999
CseI	GACGC	2 cut(s)	232, 330
CsiI	ACCWGGT	1 cut(s)	1261
Csp6I	GTAC	7 cut(s)	794, 919, 1033, 1072, 1524, 1607, 1801
CspCI	CAANNNNNGTGG	2 cut(s)	1519, 1554
CviAII	CATG	9 cut(s)	31, 211, 487, 1016, 1076, 1123, 1133, 1179, 1858
CviQI	GTAC	7 cut(s)	794, 919, 1033, 1072, 1524, 1607, 1801
DdeI	CTNAG	8 cut(s)	363, 471, 476, 598, 756, 1041, 1473, 1718
DinI	GGCGCC	1 cut(s)	369
DpnI	GATC	7 cut(s)	202, 420, 704, 753, 1068, 1365, 1572
DpnII	GATC	7 cut(s)	200, 418, 702, 751, 1066, 1363, 1570
DraIII	CACNNNGTG	1 cut(s)	1265
DrdI	GACNNNNNNGTC	2 cut(s)	401, 813
DseDI	GACNNNNNNGTC	2 cut(s)	401, 813
EaeI	YGGCCR	1 cut(s)	1321
Eam1104I	CTCTTC	7 cut(s)	603, 609, 1419, 1443, 1452, 1874, 1913
EarI	CTCTTC	7 cut(s)	603, 609, 1419, 1443, 1452, 1874, 1913
Eco130I	CCWWGG	1 cut(s)	1178
Eco147I	AGGCCT	2 cut(s)	359, 715
Eco24I	GRGCYC	2 cut(s)	580, 1701
Eco31I	GGTCTC	2 cut(s)	383, 1775
Eco32I	GATATC	1 cut(s)	997
Eco47I	GGWCC	1 cut(s)	1205
Eco57I	CTGAAG	2 cut(s)	591, 627
Eco72I	CACGTG	1 cut(s)	92
Eco81I	CCTNAGG	1 cut(s)	1473
Eco88I	CYCGRG	1 cut(s)	1238
Eco91I	GGTNACC	2 cut(s)	1277, 1747
EcoO109I	RGGNCCY	1 cut(s)	1697
EcoO65I	GGTNACC	2 cut(s)	1277, 1747
EcoRI	GAATTC	1 cut(s)	497
EcoRII	CCWGG	4 cut(s)	528, 1117, 1261, 1285
EcoRV	GATATC	1 cut(s)	997
EcoT14I	CCWWGG	1 cut(s)	1178
EcoT22I	ATGCAT	1 cut(s)	1024
EcoT38I	GRGCYC	2 cut(s)	580, 1701
EgeI	GGCGCC	1 cut(s)	369
EheI	GGCGCC	1 cut(s)	369
ErhI	CCWWGG	1 cut(s)	1178
FaeI	CATG	9 cut(s)	34, 214, 490, 1019, 1079, 1126, 1136, 1182, 1861
FalI	AAGNNNNNCTT	1 cut(s)	1910
FaqI	GGGAC	1 cut(s)	1654
FatI	CATG	9 cut(s)	30, 210, 486, 1015, 1075, 1122, 1132, 1178, 1857
FblI	GTMKAC	1 cut(s)	1509
Fnu4HI	GCNGC	7 cut(s)	233, 294, 747, 761, 888, 1678, 1829
FokI	GGATG	7 cut(s)	503, 575, 749, 1269, 1352, 1505, 1784
FriOI	GRGCYC	2 cut(s)	580, 1701
Fsp4HI	GCNGC	7 cut(s)	233, 294, 747, 761, 888, 1678, 1829
FspBI	CTAG	1 cut(s)	1269
FspI	TGCGCA	2 cut(s)	29, 1565
GlaI	GCGC	5 cut(s)	18, 29, 369, 382, 1565
GluI	GCNGC	7 cut(s)	233, 294, 747, 761, 888, 1678, 1829
GsaI	CCCAGC	1 cut(s)	1297
HaeII	RGCGCY	2 cut(s)	371, 384
HaeIII	GGCC	4 cut(s)	359, 715, 1323, 1699
HapII	CCGG	6 cut(s)	133, 204, 371, 384, 1239, 1637
HgaI	GACGC	2 cut(s)	232, 330
HhaI	GCGC	5 cut(s)	19, 30, 370, 383, 1566
Hin1I	GRCGYC	4 cut(s)	243, 322, 368, 402
Hin1II	CATG	9 cut(s)	34, 214, 490, 1019, 1079, 1126, 1136, 1182, 1861
Hin6I	GCGC	5 cut(s)	17, 28, 368, 381, 1564
HinP1I	GCGC	5 cut(s)	17, 28, 368, 381, 1564
HincII	GTYRAC	2 cut(s)	1053, 1393
HindII	GTYRAC	2 cut(s)	1053, 1393
HindIII	AAGCTT	1 cut(s)	665
HinfI	GANTC	7 cut(s)	374, 533, 566, 596, 602, 1057, 1583
HpaII	CCGG	6 cut(s)	133, 204, 371, 384, 1239, 1637
HphI	GGTGA	4 cut(s)	1076, 1108, 1424, 1741
Hpy166II	GTNNAC	4 cut(s)	842, 1053, 1393, 1510
Hpy188III	TCNNGA	5 cut(s)	173, 204, 461, 514, 875
Hpy8I	GTNNAC	4 cut(s)	842, 1053, 1393, 1510
Hpy99I	CGWCG	4 cut(s)	248, 324, 330, 398
HpyAV	CCTTC	7 cut(s)	553, 566, 583, 1073, 1078, 1834, 1898
HpyCH4III	ACNGT	4 cut(s)	793, 864, 1329, 1786
HpyCH4IV	ACGT	5 cut(s)	91, 402, 844, 1664, 1888
HpyCH4V	TGCA	9 cut(s)	4, 193, 740, 746, 973, 1022, 1195, 1652, 1796
HpyF10VI	GCNNNNNNNGC	5 cut(s)	25, 293, 321, 365, 746
HpyF3I	CTNAG	8 cut(s)	363, 471, 476, 598, 756, 1041, 1473, 1718
HpySE526I	ACGT	5 cut(s)	91, 402, 844, 1664, 1888
Hsp92I	GRCGYC	4 cut(s)	243, 322, 368, 402
Hsp92II	CATG	9 cut(s)	34, 214, 490, 1019, 1079, 1126, 1136, 1182, 1861
HspAI	GCGC	5 cut(s)	17, 28, 368, 381, 1564
KasI	GGCGCC	1 cut(s)	367
Kpn2I	TCCGGA	1 cut(s)	203
KroI	GCCGGC	1 cut(s)	383
KroNI	GCCGGC	1 cut(s)	385
Kzo9I	GATC	7 cut(s)	200, 418, 702, 751, 1066, 1363, 1570
LguI	GCTCTTC	1 cut(s)	609
LmnI	GCTCC	5 cut(s)	575, 1174, 1255, 1384, 1639
Lsp1109I	GCAGC	5 cut(s)	244, 747, 758, 874, 1815
LweI	GCATC	2 cut(s)	727, 1009
MabI	ACCWGGT	1 cut(s)	1261
MaeI	CTAG	1 cut(s)	1269
MaeII	ACGT	5 cut(s)	91, 402, 844, 1664, 1888
MaeIII	GTNAC	5 cut(s)	135, 1277, 1658, 1747, 1853
MalI	GATC	7 cut(s)	202, 420, 704, 753, 1068, 1365, 1572
MbiI	CCGCTC	1 cut(s)	1677
MboI	GATC	7 cut(s)	200, 418, 702, 751, 1066, 1363, 1570
MflI	RGATCY	1 cut(s)	702
MhlI	GDGCHC	3 cut(s)	580, 1171, 1701
MlsI	TGGCCA	1 cut(s)	1323
MluNI	TGGCCA	1 cut(s)	1323
Mly113I	GGCGCC	1 cut(s)	368
MlyI	GAGTC	5 cut(s)	383, 527, 575, 590, 1051
Mox20I	TGGCCA	1 cut(s)	1323
Mph1103I	ATGCAT	1 cut(s)	1024
MreI	CGCCGGCG	1 cut(s)	383
MroI	TCCGGA	1 cut(s)	203
MroNI	GCCGGC	1 cut(s)	383
MroXI	GAANNNNTTC	1 cut(s)	456
MscI	TGGCCA	1 cut(s)	1323
MslI	CAYNNNNRTG	3 cut(s)	1190, 1287, 1410
Msp20I	TGGCCA	1 cut(s)	1323
MspA1I	CMGCKG	1 cut(s)	749
MspI	CCGG	6 cut(s)	133, 204, 371, 384, 1239, 1637
MspR9I	CCNGG	7 cut(s)	530, 1119, 1239, 1240, 1263, 1287, 1638
Mva1269I	GAATGC	2 cut(s)	1252, 1497
MvaI	CCWGG	4 cut(s)	530, 1119, 1263, 1287
MwoI	GCNNNNNNNGC	5 cut(s)	25, 293, 321, 365, 746
NaeI	GCCGGC	1 cut(s)	385
NarI	GGCGCC	1 cut(s)	368
NciI	CCSGG	3 cut(s)	1239, 1240, 1638
NcoI	CCATGG	1 cut(s)	1178
NdeII	GATC	7 cut(s)	200, 418, 702, 751, 1066, 1363, 1570
NgoMIV	GCCGGC	1 cut(s)	383
NheI	GCTAGC	1 cut(s)	1268
NlaIII	CATG	9 cut(s)	34, 214, 490, 1019, 1079, 1126, 1136, 1182, 1861
NlaIV	GGNNCC	6 cut(s)	208, 369, 577, 1386, 1681, 1699
NmuCI	GTSAC	4 cut(s)	135, 1658, 1747, 1853
NsbI	TGCGCA	2 cut(s)	29, 1565
NsiI	ATGCAT	1 cut(s)	1024
NspI	RCATGY	1 cut(s)	1126
PaeI	GCATGC	1 cut(s)	1126
PaqCI	CACCTGC	1 cut(s)	1555
PceI	AGGCCT	2 cut(s)	359, 715
PciSI	GCTCTTC	1 cut(s)	609
PcsI	WCGNNNNNNNCGW	2 cut(s)	1661, 1869
PctI	GAATGC	2 cut(s)	1252, 1497
PdiI	GCCGGC	1 cut(s)	385
PdmI	GAANNNNTTC	1 cut(s)	456
PfeI	GAWTC	2 cut(s)	602, 1583
PflFI	GACNNNGTC	2 cut(s)	324, 1859
PfoI	TCCNGGA	1 cut(s)	528
PkrI	GCNGC	7 cut(s)	234, 295, 748, 762, 889, 1679, 1830
PleI	GAGTC	5 cut(s)	382, 527, 574, 590, 1051
PluTI	GGCGCC	1 cut(s)	371
PmaCI	CACGTG	1 cut(s)	92
PmlI	CACGTG	1 cut(s)	92
PpsI	GAGTC	5 cut(s)	382, 527, 574, 590, 1051
Ppu21I	YACGTR	2 cut(s)	92, 1665
Psp6I	CCWGG	4 cut(s)	528, 1117, 1261, 1285
PspCI	CACGTG	1 cut(s)	92
PspEI	GGTNACC	2 cut(s)	1277, 1747
PspFI	CCCAGC	1 cut(s)	1293
PspGI	CCWGG	4 cut(s)	528, 1117, 1261, 1285
PspN4I	GGNNCC	6 cut(s)	208, 369, 577, 1386, 1681, 1699
PspOMI	GGGCCC	1 cut(s)	1697
PspPI	GGNCC	3 cut(s)	1205, 1697, 1698
PsrI	GAACNNNNNNTAC	2 cut(s)	1335, 1367
PstI	CTGCAG	1 cut(s)	748
PstNI	CAGNNNCTG	1 cut(s)	605
PsuI	RGATCY	1 cut(s)	702
PsyI	GACNNNGTC	2 cut(s)	324, 1859
PvuII	CAGCTG	1 cut(s)	749
RsaI	GTAC	7 cut(s)	795, 920, 1034, 1073, 1525, 1608, 1802
RsaNI	GTAC	7 cut(s)	794, 919, 1033, 1072, 1524, 1607, 1801
RseI	CAYNNNNRTG	3 cut(s)	1190, 1287, 1410
SapI	GCTCTTC	1 cut(s)	609
SatI	GCNGC	7 cut(s)	233, 294, 747, 761, 888, 1678, 1829
Sau3AI	GATC	7 cut(s)	200, 418, 702, 751, 1066, 1363, 1570
Sau96I	GGNCC	3 cut(s)	1205, 1697, 1698
ScaI	AGTACT	2 cut(s)	1525, 1608
SchI	GAGTC	5 cut(s)	383, 527, 575, 590, 1051
ScrFI	CCNGG	7 cut(s)	530, 1119, 1239, 1240, 1263, 1287, 1638
SduI	GDGCHC	3 cut(s)	580, 1171, 1701
SexAI	ACCWGGT	1 cut(s)	1261
SfaNI	GCATC	2 cut(s)	727, 1009
SfcI	CTRYAG	3 cut(s)	744, 833, 1506
SfoI	GGCGCC	1 cut(s)	369
SgrAI	CRCCGGYG	1 cut(s)	383
SinI	GGWCC	1 cut(s)	1205
SmaI	CCCGGG	1 cut(s)	1240
SmiMI	CAYNNNNRTG	3 cut(s)	1190, 1287, 1410
SmlI	CTYRAG	2 cut(s)	7, 1519
SmoI	CTYRAG	2 cut(s)	7, 1519
SphI	GCATGC	1 cut(s)	1126
SseBI	AGGCCT	2 cut(s)	359, 715
SsiI	CCGC	4 cut(s)	218, 291, 294, 1677
SspDI	GGCGCC	1 cut(s)	367
SspMI	CTAG	1 cut(s)	1269
StuI	AGGCCT	2 cut(s)	359, 715
StyD4I	CCNGG	7 cut(s)	528, 1117, 1237, 1238, 1261, 1285, 1636
StyI	CCWWGG	1 cut(s)	1178
TaaI	ACNGT	4 cut(s)	793, 864, 1329, 1786
TaiI	ACGT	5 cut(s)	94, 405, 847, 1667, 1891
TaqI	TCGA	4 cut(s)	174, 305, 513, 999
TaqII	GACCGA	1 cut(s)	407
TatI	WGTACW	2 cut(s)	1523, 1606
TauI	GCSGC	2 cut(s)	296, 1680
TfiI	GAWTC	2 cut(s)	602, 1583
TscAI	CASTG	2 cut(s)	1537, 1858
TseFI	GTSAC	4 cut(s)	135, 1658, 1747, 1853
TseI	GCWGC	5 cut(s)	232, 746, 760, 887, 1828
Tsp45I	GTSAC	4 cut(s)	135, 1658, 1747, 1853
TspDTI	ATGAA	7 cut(s)	642, 695, 871, 1092, 1127, 1149, 1329
TspGWI	ACGGA	2 cut(s)	526, 688
TspMI	CCCGGG	1 cut(s)	1238
TspRI	CASTG	2 cut(s)	1537, 1858
Tth111I	GACNNNGTC	2 cut(s)	324, 1859
VpaK11BI	GGWCC	1 cut(s)	1205
XapI	RAATTY	5 cut(s)	497, 507, 518, 827, 1233
XceI	RCATGY	1 cut(s)	1126
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1331
XmaI	CCCGGG	1 cut(s)	1238
XmiI	GTMKAC	1 cut(s)	1509
XmnI	GAANNNNTTC	1 cut(s)	456
XspI	CTAG	1 cut(s)	1269
ZraI	GACGTC	1 cut(s)	403
ZrmI	AGTACT	2 cut(s)	1525, 1608
Zsp2I	ATGCAT	1 cut(s)	1024

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.