Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0004036

Physical Location & Seq

Genomic Coordinates Forward (+)

34793359 .. 34795242

Gene Structure 1884 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g45300.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

ATGACGACTACAGAAACACTCCGGCCGTATCCACATAGCGCCTTGATGAACAATGATGATCCTCAAAAGGTAGTTGATCGAGTTGAAATTGAATATGTTCCAGAGCAATTAACTGAGCTAAACGATTCCATGTATGCAGATTTTAAACAAATTTTCGAGAAGTTCACATTCAAGGACACCGCGGGTGTCGAAGAGGAAAAGAAAGATGATGTCCATCACACTCAGGAAGACACAAATTCAGAAGAGGAGGACTATCAACAAAAGCAAGCAAAGAGCGTTTCAAACAAGAAGAAAAAGCGAGCGAAGATGAGCGTTGCGCAACTGAAACAGATGTGTTCAAGGCCTGATGTTGTTGAGGTGTGGGACGCAACTGCAGCCGATCCCAAGTTGTTGGTGCATCTCAAATCATACCGGAACACGGTACCGGTGCCAAGGCATTGGAGCCAGAAGAGAAAGTACTTACAGGGTACGCGCGGTGTCGAAAAACGACCCTTTCAGCTCCCTGCTTACATTGCTGATACCGGAATAGCGAAACTCCGAGAGGCTTACGTTGAGAAACAAGAGAGCAAGAAGTTAAAGCAAAAGACACGAGAAAGAATGCAGCCAAAGACGGGGAAGATGGACATTGATTATCAGGTACTTCATGATGCCTTCTTCAAGCATCAGGTTAAGCCAAAGCTCACAATACTTGGTGATCTGTACTATGAAGGGAAAGAGTATAATCAGATGGCACTGATGCATAAGATGAAGCCAGGTGGGAATTTGTCACCTGCACTAAGAGAAGCTCTCGGTATGTCAGAAGGTGCTCCTCCGCCGTGGCTCATTAACATGCAGAGATATGGTCCTCCACCATCATATCCATGTCTCAAAATCCCGGGGCTGAATGCTCCTATCCCCGCCTTAGCTAGCTTTGGTTACCATCCTGGTGGCTGGGGAAAGCCTCCTGTTGATGAATATGGCCAGCCTTTGTATGGCGGTAACGTTTTTGGTGTTGAGAAACCTGATCATCATGGGGAAGAGCCGGTTGAAAAGATGAAACATTGGGGTGAGTTGGAAGATGAAGAAGAAGTAAACGAAGATGATGATGAAGAACAGCAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGTAAAGGAAGAGAAAGAGGATGATATGAAATCTGTACCTGATGACACAGTACCTGACGAGATTGATCTTCGGAAGCAGTCGAGCAAAGAAACAGGTGAAAAGCCTTCATTGTACCAAGTACTTGAAGAGAAGGAAGAAAGAATTGGCGCAGGGACATTGCTCGGAACAACTCACACGTATGTTGTTAGTGGCGGTGGTGGCCGAGGAGGCGAAAAAGCAGCAGGAGTGAAGAGGGTGGAGCTGTTGAGAGGTCACAAGGCAGATAAAGTGGAGGTGAGTCTACAACCTGAAGAGTTGGAAGCTATGGAGAATGTGTTGCCTGAAAAGTATCAGCAAGCCAGGGAGGAGGAGAAGCTGCGTCATCAGCCGGAGGATTATAGTGACATGGTTGCGGAGGATATTAAGAAGAGGAAGCGTAAGATGCAGGAAAAGGAAGCTAAATCCAATAAGAAGAACAAGGACGGTGGTTACAAGTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005686 GO:0005689 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0030532 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0070013 GO:0071011 GO:0071013 GO:0071704 GO:0090304 GO:0097525 GO:0120114 GO:1901360 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DUF382 PSP

Protein Analysis

536

Amino Acids

61.36

Weight (kDa)

5.34

Isoelectric Point (pI)

58.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF382	PF04037	114 - 239	2.7e-58	Domain of unknown function (DUF382)
PSP	PF04046	253 - 296	7.2e-21	PSP

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004036)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11520 AT4G21660 AT4G21660 AT4G21660
fragaria_vesca	FvH4_3g04740 FvH4_6g45300
malus_domestica	MD05G1318200.v1.1 MD10G1297600.v1.1
prunus_persica	Prupe.4G042600_v2.0.a1 Prupe.4G042600_v2.0.a1
pyrus_communis	pycom05g29460 pycom10g25110
rosa_chinensis	RchiOBHm_Chr2g0163041 RchiOBHm_Chr5g0007761
rosa_laevigata	RLG00000021367 RLG00000031486
rosa_multiflora	Rmu_co8286435.1_g000001 Rmu_co8351911.1_g000001 Rmu_sc0005098.1_g000019 Rmu_sc0007039.1_g000007
rosa_roxburghii	Rroxscaffold_1G00068650 Rroxscaffold_2G00087600
rosa_rugosa	Rorug02G0500000.1 Rorug04G0430100
rosa_samantha	Rh2AG566300 Rh2BG578600 Rh2CG548500 Rh5AG058500 Rh5BG055300 Rh5CG065100 Rh5DG054300
rosa_wichuraiana	Rw2G046870 Rw5G006120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	778
Acc16I	TGCGCA	1 cut(s)	318
Acc36I	ACCTGC	1 cut(s)	778
Acc65I	GGTACC	1 cut(s)	421
AccB1I	GGYRCC	2 cut(s)	421, 427
AccI	GTMKAC	1 cut(s)	1408
AccII	CGCG	3 cut(s)	182, 472, 474
AciI	CCGC	8 cut(s)	180, 182, 474, 812, 897, 975, 1320, 1520
AclI	AACGTT	1 cut(s)	981
AclWI	GGATC	2 cut(s)	53, 374
AcoI	YGGCCR	3 cut(s)	23, 958, 1327
AcsI	RAATTY	3 cut(s)	150, 235, 760
AcuI	CTGAAG	1 cut(s)	1437
AfaI	GTAC	9 cut(s)	423, 458, 469, 639, 701, 1164, 1179, 1241, 1248
AfiI	CCNNNNNNNGG	3 cut(s)	418, 611, 971
AflIII	ACRYGT	1 cut(s)	1302
AgeI	ACCGGT	1 cut(s)	424
AgsI	TTSAA	8 cut(s)	86, 92, 172, 282, 339, 658, 1028, 1253
AjnI	CCWGG	3 cut(s)	751, 922, 1466
AjuI	GAANNNNNNNTTGG	2 cut(s)	1254, 1286
Alw21I	GWGCWC	1 cut(s)	808
Alw26I	GTCTC	1 cut(s)	869
AlwI	GGATC	2 cut(s)	53, 374
AlwNI	CAGNNNCTG	1 cut(s)	1181
Ama87I	CYCGRG	1 cut(s)	874
AoxI	GGCC	4 cut(s)	23, 341, 958, 1327
ApeKI	GCWGC	4 cut(s)	374, 601, 1346, 1483
ApoI	RAATTY	3 cut(s)	150, 235, 760
AsiGI	ACCGGT	1 cut(s)	424
Asp700I	GAANNNNTTC	1 cut(s)	96
Asp718I	GGTACC	1 cut(s)	421
AspLEI	GCGC	4 cut(s)	41, 319, 474, 1277
AspS9I	GGNCC	1 cut(s)	842
AsuC2I	CCSGG	2 cut(s)	875, 876
AsuHPI	GGTGA	5 cut(s)	704, 759, 1058, 1235, 1414
AsuNHI	GCTAGC	1 cut(s)	905
AvaI	CYCGRG	1 cut(s)	874
AvaII	GGWCC	1 cut(s)	842
BalI	TGGCCA	1 cut(s)	960
BanI	GGYRCC	2 cut(s)	421, 427
BarI	GAAGNNNNNNTAC	2 cut(s)	440, 472
BauI	CACGAG	1 cut(s)	588
BbsI	GAAGAC	1 cut(s)	234
Bbv12I	GWGCWC	1 cut(s)	808
BbvI	GCAGC	4 cut(s)	386, 613, 1358, 1470
BccI	CCATC	5 cut(s)	222, 613, 721, 859, 927
BceAI	ACGGC	2 cut(s)	10, 799
BciT130I	CCWGG	3 cut(s)	753, 924, 1468
BciVI	GTATCC	1 cut(s)	39
BclI	TGATCA	1 cut(s)	1003
BcnI	CCSGG	2 cut(s)	875, 876
BcoDI	GTCTC	1 cut(s)	869
BfaI	CTAG	2 cut(s)	906, 1606
BfmI	CTRYAG	2 cut(s)	9, 372
BfoI	RGCGCY	1 cut(s)	42
BfuAI	ACCTGC	1 cut(s)	778
BfuI	GTATCC	1 cut(s)	39
BglI	GCCNNNNNGGC	1 cut(s)	1335
BisI	GCNGC	4 cut(s)	375, 602, 1347, 1484
BlsI	GCNGC	4 cut(s)	376, 603, 1348, 1485
BmcAI	AGTACT	2 cut(s)	458, 1248
Bme1390I	CCNGG	5 cut(s)	753, 875, 876, 924, 1468
Bme18I	GGWCC	1 cut(s)	842
BmeT110I	CYCGRG	1 cut(s)	874
BmgT120I	GGNCC	1 cut(s)	842
BmiI	GGNNCC	3 cut(s)	423, 429, 443
BmrFI	CCNGG	5 cut(s)	753, 875, 876, 924, 1468
BmsI	GCATC	5 cut(s)	406, 637, 670, 726, 1539
BmtI	GCTAGC	1 cut(s)	909
BpiI	GAAGAC	1 cut(s)	234
BplI	GAGNNNNNCTC	2 cut(s)	771, 803
Bpu10I	CCTNAGC	1 cut(s)	901
BpuMI	CCSGG	2 cut(s)	875, 876
BsaAI	YACGTR	1 cut(s)	1305
BsaBI	GATNNNNATC	1 cut(s)	213
BsaJI	CCNNGG	7 cut(s)	180, 431, 815, 874, 875, 1330, 1467
BsaWI	WCCGGW	3 cut(s)	411, 424, 521
BsaXI	ACNNNNNCTCC	2 cut(s)	1427, 1457
Bsc4I	CCNNNNNNNGG	3 cut(s)	418, 611, 971
Bse118I	RCCGGY	2 cut(s)	424, 1021
Bse3DI	GCAATG	2 cut(s)	510, 1283
Bse8I	GATNNNNATC	1 cut(s)	213
BseBI	CCWGG	3 cut(s)	753, 924, 1468
BseDI	CCNNGG	7 cut(s)	180, 431, 815, 874, 875, 1330, 1467
BseGI	GGATG	2 cut(s)	919, 1153
BseJI	GATNNNNATC	1 cut(s)	213
BseLI	CCNNNNNNNGG	3 cut(s)	418, 611, 971
BseMI	GCAATG	2 cut(s)	510, 1283
BseMII	CTCAG	2 cut(s)	105, 236
BseRI	GAGGAG	7 cut(s)	260, 798, 1115, 1118, 1347, 1487, 1490
BseX3I	CGGCCG	1 cut(s)	23
BseXI	GCAGC	4 cut(s)	386, 613, 1358, 1470
BseYI	CCCAGC	1 cut(s)	930
BsgI	GTGCAG	1 cut(s)	756
Bsh1236I	CGCG	3 cut(s)	182, 472, 474
Bsh1285I	CGRYCG	1 cut(s)	26
BshFI	GGCC	4 cut(s)	25, 343, 960, 1329
BshNI	GGYRCC	2 cut(s)	421, 427
BshTI	ACCGGT	1 cut(s)	424
BsiEI	CGRYCG	1 cut(s)	26
BsiHKAI	GWGCWC	1 cut(s)	808
BsiHKCI	CYCGRG	1 cut(s)	874
BsiSI	CCGG	7 cut(s)	22, 412, 425, 522, 875, 1022, 1496
BslFI	GGGAC	2 cut(s)	377, 1294
BslI	CCNNNNNNNGG	3 cut(s)	418, 611, 971
BsmAI	GTCTC	1 cut(s)	869
BsmFI	GGGAC	2 cut(s)	377, 1294
BsmI	GAATGC	2 cut(s)	603, 889
BsnI	GGCC	4 cut(s)	25, 343, 960, 1329
BsoBI	CYCGRG	1 cut(s)	874
Bsp1286I	GDGCHC	1 cut(s)	808
Bsp143I	GATC	6 cut(s)	58, 76, 379, 694, 1003, 1192
BspACI	CCGC	8 cut(s)	180, 182, 474, 812, 897, 975, 1320, 1520
BspANI	GGCC	4 cut(s)	25, 343, 960, 1329
BspCNI	CTCAG	2 cut(s)	106, 235
BspFNI	CGCG	3 cut(s)	182, 472, 474
BspHI	TCATGA	1 cut(s)	643
BspLI	GGNNCC	3 cut(s)	423, 429, 443
BspMAI	CTGCAG	1 cut(s)	376
BspMI	ACCTGC	1 cut(s)	778
BspOI	GCTAGC	1 cut(s)	909
BspPI	GGATC	2 cut(s)	53, 374
BspQI	GCTCTTC	1 cut(s)	1011
BspT107I	GGYRCC	2 cut(s)	421, 427
BsrDI	GCAATG	2 cut(s)	510, 1283
BsrFI	RCCGGY	2 cut(s)	424, 1021
BssAI	RCCGGY	2 cut(s)	424, 1021
BssECI	CCNNGG	7 cut(s)	180, 431, 815, 874, 875, 1330, 1467
BssMI	GATC	6 cut(s)	58, 76, 379, 694, 1003, 1192
BssSI	CACGAG	1 cut(s)	588
BssT1I	CCWWGG	1 cut(s)	431
Bst2BI	CACGAG	1 cut(s)	588
Bst2UI	CCWGG	3 cut(s)	753, 924, 1468
Bst4CI	ACNGT	3 cut(s)	421, 1177, 1592
Bst6I	CTCTTC	9 cut(s)	186, 237, 443, 1011, 1131, 1248, 1352, 1413, 1529
BstBAI	YACGTR	1 cut(s)	1305
BstC8I	GCNNGC	5 cut(s)	267, 300, 907, 962, 1464
BstDEI	CTNAG	4 cut(s)	114, 222, 776, 901
BstDSI	CCRYGG	2 cut(s)	180, 815
BstEII	GGTNACC	1 cut(s)	914
BstF5I	GGATG	2 cut(s)	919, 1153
BstFNI	CGCG	3 cut(s)	182, 472, 474
BstH2I	RGCGCY	1 cut(s)	42
BstHHI	GCGC	4 cut(s)	41, 319, 474, 1277
BstKTI	GATC	6 cut(s)	61, 79, 382, 697, 1006, 1195
BstMAI	GTCTC	1 cut(s)	869
BstMBI	GATC	6 cut(s)	58, 76, 379, 694, 1003, 1192
BstMCI	CGRYCG	1 cut(s)	26
BstMWI	GCNNNNNNNGC	6 cut(s)	374, 512, 1326, 1335, 1492, 1549
BstNI	CCWGG	3 cut(s)	753, 924, 1468
BstNSI	RCATGY	1 cut(s)	832
BstPI	GGTNACC	1 cut(s)	914
BstSCI	CCNGG	5 cut(s)	751, 873, 874, 922, 1466
BstSFI	CTRYAG	2 cut(s)	9, 372
BstUI	CGCG	3 cut(s)	182, 472, 474
BstV1I	GCAGC	4 cut(s)	386, 613, 1358, 1470
BstV2I	GAAGAC	1 cut(s)	234
BstXI	CCANNNNNNTGG	3 cut(s)	391, 438, 926
BstZI	CGGCCG	1 cut(s)	23
BsuI	GTATCC	1 cut(s)	39
BsuRI	GGCC	4 cut(s)	25, 343, 960, 1329
BtgI	CCRYGG	2 cut(s)	180, 815
BtsCI	GGATG	2 cut(s)	919, 1153
BtsIMutI	CAGTG	1 cut(s)	731
BveI	ACCTGC	1 cut(s)	778
Cac8I	GCNNGC	5 cut(s)	267, 300, 907, 962, 1464
CaiI	CAGNNNCTG	1 cut(s)	1181
CciI	TCATGA	1 cut(s)	643
CfoI	GCGC	4 cut(s)	41, 319, 474, 1277
Cfr10I	RCCGGY	2 cut(s)	424, 1021
Cfr13I	GGNCC	1 cut(s)	842
Cfr42I	CCGCGG	1 cut(s)	183
Cfr9I	CCCGGG	1 cut(s)	874
CseI	GACGC	2 cut(s)	374, 1475
Csp6I	GTAC	9 cut(s)	422, 457, 468, 638, 700, 1163, 1178, 1240, 1247
CspAI	ACCGGT	1 cut(s)	424
CspCI	CAANNNNNGTGG	2 cut(s)	1573, 1608
CviAII	CATG	6 cut(s)	130, 644, 829, 861, 1010, 1513
CviQI	GTAC	9 cut(s)	422, 457, 468, 638, 700, 1163, 1178, 1240, 1247
DdeI	CTNAG	4 cut(s)	114, 222, 776, 901
DpnI	GATC	6 cut(s)	60, 78, 381, 696, 1005, 1194
DpnII	GATC	6 cut(s)	58, 76, 379, 694, 1003, 1192
DraI	TTTAAA	1 cut(s)	145
EaeI	YGGCCR	3 cut(s)	23, 958, 1327
EagI	CGGCCG	1 cut(s)	23
Eam1104I	CTCTTC	9 cut(s)	186, 237, 443, 1011, 1131, 1248, 1352, 1413, 1529
EarI	CTCTTC	9 cut(s)	186, 237, 443, 1011, 1131, 1248, 1352, 1413, 1529
EciI	GGCGGA	1 cut(s)	801
EclXI	CGGCCG	1 cut(s)	23
Eco130I	CCWWGG	1 cut(s)	431
Eco147I	AGGCCT	1 cut(s)	343
Eco47I	GGWCC	1 cut(s)	842
Eco52I	CGGCCG	1 cut(s)	23
Eco57I	CTGAAG	1 cut(s)	1437
Eco88I	CYCGRG	1 cut(s)	874
Eco91I	GGTNACC	1 cut(s)	914
EcoO65I	GGTNACC	1 cut(s)	914
EcoRII	CCWGG	3 cut(s)	751, 922, 1466
EcoT14I	CCWWGG	1 cut(s)	431
EcoT22I	ATGCAT	1 cut(s)	741
ErhI	CCWWGG	1 cut(s)	431
FaeI	CATG	6 cut(s)	133, 647, 832, 864, 1013, 1516
FaqI	GGGAC	2 cut(s)	377, 1294
FatI	CATG	6 cut(s)	129, 643, 828, 860, 1009, 1512
FauI	CCCGC	2 cut(s)	175, 904
FbaI	TGATCA	1 cut(s)	1003
FblI	GTMKAC	1 cut(s)	1408
Fnu4HI	GCNGC	4 cut(s)	375, 602, 1347, 1484
FokI	GGATG	2 cut(s)	906, 1160
Fsp4HI	GCNGC	4 cut(s)	375, 602, 1347, 1484
FspBI	CTAG	2 cut(s)	906, 1606
FspI	TGCGCA	1 cut(s)	318
GlaI	GCGC	4 cut(s)	40, 318, 473, 1276
GluI	GCNGC	4 cut(s)	375, 602, 1347, 1484
GsaI	CCCAGC	1 cut(s)	934
HaeII	RGCGCY	1 cut(s)	42
HaeIII	GGCC	4 cut(s)	25, 343, 960, 1329
HapII	CCGG	7 cut(s)	22, 412, 425, 522, 875, 1022, 1496
HgaI	GACGC	2 cut(s)	374, 1475
HhaI	GCGC	4 cut(s)	41, 319, 474, 1277
Hin1II	CATG	6 cut(s)	133, 647, 832, 864, 1013, 1516
Hin6I	GCGC	4 cut(s)	39, 317, 472, 1275
HinP1I	GCGC	4 cut(s)	39, 317, 472, 1275
HinfI	GANTC	2 cut(s)	125, 1405
HpaII	CCGG	7 cut(s)	22, 412, 425, 522, 875, 1022, 1496
HphI	GGTGA	5 cut(s)	704, 759, 1058, 1235, 1414
Hpy166II	GTNNAC	3 cut(s)	165, 1072, 1409
Hpy188I	TCNGA	6 cut(s)	241, 539, 726, 799, 1200, 1292
Hpy188III	TCNNGA	4 cut(s)	101, 157, 224, 644
Hpy8I	GTNNAC	3 cut(s)	165, 1072, 1409
HpyAV	CCTTC	5 cut(s)	661, 701, 794, 1242, 1252
HpyCH4III	ACNGT	3 cut(s)	421, 1177, 1592
HpyCH4IV	ACGT	3 cut(s)	549, 981, 1304
HpyCH4V	TGCA	8 cut(s)	137, 374, 397, 601, 739, 773, 832, 1552
HpyF10VI	GCNNNNNNNGC	6 cut(s)	374, 512, 1326, 1335, 1492, 1549
HpyF3I	CTNAG	4 cut(s)	114, 222, 776, 901
HpySE526I	ACGT	3 cut(s)	549, 981, 1304
Hsp92II	CATG	6 cut(s)	133, 647, 832, 864, 1013, 1516
HspAI	GCGC	4 cut(s)	39, 317, 472, 1275
KpnI	GGTACC	1 cut(s)	425
Ksp22I	TGATCA	1 cut(s)	1003
KspI	CCGCGG	1 cut(s)	183
Kzo9I	GATC	6 cut(s)	58, 76, 379, 694, 1003, 1192
LguI	GCTCTTC	1 cut(s)	1011
LmnI	GCTCC	5 cut(s)	441, 504, 811, 892, 1366
Lsp1109I	GCAGC	4 cut(s)	386, 613, 1358, 1470
LweI	GCATC	5 cut(s)	406, 637, 670, 726, 1539
MaeI	CTAG	2 cut(s)	906, 1606
MaeII	ACGT	3 cut(s)	549, 981, 1304
MaeIII	GTNAC	6 cut(s)	765, 914, 977, 1379, 1508, 1595
MalI	GATC	6 cut(s)	60, 78, 381, 696, 1005, 1194
MboI	GATC	6 cut(s)	58, 76, 379, 694, 1003, 1192
MhlI	GDGCHC	1 cut(s)	808
MlsI	TGGCCA	1 cut(s)	960
MluCI	AATT	6 cut(s)	87, 107, 150, 235, 760, 1269
MluNI	TGGCCA	1 cut(s)	960
MlyI	GAGTC	1 cut(s)	1414
MmeI	TCCRAC	2 cut(s)	1032, 1404
Mox20I	TGGCCA	1 cut(s)	960
Mph1103I	ATGCAT	1 cut(s)	741
MroXI	GAANNNNTTC	1 cut(s)	96
MscI	TGGCCA	1 cut(s)	960
MseI	TTAA	6 cut(s)	110, 144, 575, 669, 825, 1530
MslI	CAYNNNNRTG	5 cut(s)	827, 859, 924, 1044, 1305
Msp20I	TGGCCA	1 cut(s)	960
MspA1I	CMGCKG	1 cut(s)	182
MspI	CCGG	7 cut(s)	22, 412, 425, 522, 875, 1022, 1496
MspR9I	CCNGG	5 cut(s)	753, 875, 876, 924, 1468
Mva1269I	GAATGC	2 cut(s)	603, 889
MvaI	CCWGG	3 cut(s)	753, 924, 1468
MvnI	CGCG	3 cut(s)	182, 472, 474
MwoI	GCNNNNNNNGC	6 cut(s)	374, 512, 1326, 1335, 1492, 1549
NciI	CCSGG	2 cut(s)	875, 876
NdeII	GATC	6 cut(s)	58, 76, 379, 694, 1003, 1192
NheI	GCTAGC	1 cut(s)	905
NlaIII	CATG	6 cut(s)	133, 647, 832, 864, 1013, 1516
NlaIV	GGNNCC	3 cut(s)	423, 429, 443
NmeAIII	GCCGAG	1 cut(s)	1355
NmuCI	GTSAC	3 cut(s)	765, 1379, 1508
NsbI	TGCGCA	1 cut(s)	318
NsiI	ATGCAT	1 cut(s)	741
NspI	RCATGY	1 cut(s)	832
PagI	TCATGA	1 cut(s)	643
PaqCI	CACCTGC	1 cut(s)	778
PceI	AGGCCT	1 cut(s)	343
PciSI	GCTCTTC	1 cut(s)	1011
PctI	GAATGC	2 cut(s)	603, 889
PdmI	GAANNNNTTC	1 cut(s)	96
PfeI	GAWTC	1 cut(s)	125
PinAI	ACCGGT	1 cut(s)	424
PkrI	GCNGC	4 cut(s)	376, 603, 1348, 1485
PleI	GAGTC	1 cut(s)	1413
PpsI	GAGTC	1 cut(s)	1413
Ppu21I	YACGTR	1 cut(s)	1305
Psp1406I	AACGTT	1 cut(s)	981
Psp6I	CCWGG	3 cut(s)	751, 922, 1466
PspEI	GGTNACC	1 cut(s)	914
PspFI	CCCAGC	1 cut(s)	930
PspGI	CCWGG	3 cut(s)	751, 922, 1466
PspN4I	GGNNCC	3 cut(s)	423, 429, 443
PspPI	GGNCC	1 cut(s)	842
PstI	CTGCAG	1 cut(s)	376
PstNI	CAGNNNCTG	1 cut(s)	1181
RsaI	GTAC	9 cut(s)	423, 458, 469, 639, 701, 1164, 1179, 1241, 1248
RsaNI	GTAC	9 cut(s)	422, 457, 468, 638, 700, 1163, 1178, 1240, 1247
RseI	CAYNNNNRTG	5 cut(s)	827, 859, 924, 1044, 1305
SacII	CCGCGG	1 cut(s)	183
SapI	GCTCTTC	1 cut(s)	1011
SaqAI	TTAA	6 cut(s)	110, 144, 575, 669, 825, 1530
SatI	GCNGC	4 cut(s)	375, 602, 1347, 1484
Sau3AI	GATC	6 cut(s)	58, 76, 379, 694, 1003, 1192
Sau96I	GGNCC	1 cut(s)	842
ScaI	AGTACT	2 cut(s)	458, 1248
SchI	GAGTC	1 cut(s)	1414
ScrFI	CCNGG	5 cut(s)	753, 875, 876, 924, 1468
SduI	GDGCHC	1 cut(s)	808
SfaNI	GCATC	5 cut(s)	406, 637, 670, 726, 1539
SfcI	CTRYAG	2 cut(s)	9, 372
Sfr303I	CCGCGG	1 cut(s)	183
SgrBI	CCGCGG	1 cut(s)	183
SinI	GGWCC	1 cut(s)	842
SmaI	CCCGGG	1 cut(s)	876
SmiMI	CAYNNNNRTG	5 cut(s)	827, 859, 924, 1044, 1305
Sse9I	AATT	6 cut(s)	87, 107, 150, 235, 760, 1269
SseBI	AGGCCT	1 cut(s)	343
SsiI	CCGC	8 cut(s)	180, 182, 474, 812, 897, 975, 1320, 1520
SspMI	CTAG	2 cut(s)	906, 1606
StuI	AGGCCT	1 cut(s)	343
StyD4I	CCNGG	5 cut(s)	751, 873, 874, 922, 1466
StyI	CCWWGG	1 cut(s)	431
TaaI	ACNGT	3 cut(s)	421, 1177, 1592
TaiI	ACGT	3 cut(s)	552, 984, 1307
TaqI	TCGA	5 cut(s)	79, 156, 189, 480, 1208
TasI	AATT	6 cut(s)	87, 107, 150, 235, 760, 1269
TatI	WGTACW	3 cut(s)	456, 699, 1246
TfiI	GAWTC	1 cut(s)	125
Tru1I	TTAA	6 cut(s)	110, 144, 575, 669, 825, 1530
Tru9I	TTAA	6 cut(s)	110, 144, 575, 669, 825, 1530
TscAI	CASTG	1 cut(s)	738
TseFI	GTSAC	3 cut(s)	765, 1379, 1508
TseI	GCWGC	4 cut(s)	374, 601, 1346, 1483
Tsp45I	GTSAC	3 cut(s)	765, 1379, 1508
TspMI	CCCGGG	1 cut(s)	874
TspRI	CASTG	1 cut(s)	738
VpaK11BI	GGWCC	1 cut(s)	842
XapI	RAATTY	3 cut(s)	150, 235, 760
XceI	RCATGY	1 cut(s)	832
XcmI	CCANNNNNNNNNTGG	1 cut(s)	968
XmaI	CCCGGG	1 cut(s)	874
XmiI	GTMKAC	1 cut(s)	1408
XmnI	GAANNNNTTC	1 cut(s)	96
XspI	CTAG	2 cut(s)	906, 1606
ZrmI	AGTACT	2 cut(s)	458, 1248
Zsp2I	ATGCAT	1 cut(s)	741

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.