Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0004036

Physical Location & Seq

Genomic Coordinates Reverse (-)

4652642 .. 4657206

Gene Structure 4565 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG054300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGCCTGCCGAGACGCTCTCTCAGCACCCAAACGGCGCCGTCGCCAACGGCGATCTGAACCCGCTCGCTAACGGCGCCGTTAAAAAAGCGAGGGAGATCGAACGACGCCGTCGGAGGAGAAAGCAGAAGAAGAACCACAAAGCTTCTCAATCCACCACCGCCAGCGACGTTAGCGACGGCGAAGATGTGAAGGAGAACAACGATCCTCAACAGGTTGTTGAGCAAGTTGAAATCGAGTATGTTCCAGAGAAAGCTGAGCTAAATGAAGACATGGATGAGGAGTTCAGGAAAATTTTCGAAAAATTCACATTCAAGAATGCTGCGGGTGTTGAGGAGGAAAAGAAAGATGAGTCTCAAGAAGGAGCCTCAAAGAAGAAGGCTGATTCCGATTCTGAAGAGGAGGAACAGGATAATGAACAAAAAGAGAAAGGCGTTTCAAACAAGAAGAAAAAGCTTCAACGGCGCATGAAGATTGCAGAATTGAAACAGATCTGTGCAAGGCCCGATGTTGTTGAGGTGTGGGATGCAACTGCAGCTGATCCTAAATTGCTGGTCTTTTTGAAATCGTACCGGAATACTGTACCGGTGCCAAGGCATTGGTGCCAGAAAAGGAAATTTTTACAGGGTAAACGTGGTATCGAGAAGCAACCGTTCCAGCTTCCTGATTTCATTGCTGCAACTGGAATTGAGAAAATTAGACAGGCATACATTGAAAAAGAAGATAGTAAGAAGTTGAAGCAAAAGCAACGAGAACGTATGCAGCCAAAGATGGGCAAAATGGATATTGATTATCAGGTTCTTCATGATGCTTTCTTCAAGTACCAAACTAAGCCAAAGCTCACAACACTTGGTGATCTGTACCATGAAGGGAAAGAGTTTGAGGTAAAATTAAGAGAGATGAAGCCAGGCATGCTGTCACATGAACTGAAAGAAGCTCTGGGTATGCCAGATGGTGCTCCTCCCCCATGGCTCATTAATATGCAGAGATATGGTCCTCCTCCATCATATCCACATTTGAAAATCCCTGGGCTGAATGCTCCAATCCCCGCTGGAGCTAGCTTTGGTTATCATCCAGGTGGCTGGGGAAAGCCTCCTGTTGATGAATATGGCCAACCGTTGTATGGAGACGTTTTTGGTGTTCAGCAGCAAGATCAGCCTAATTATGAGGAAGAGCCGGTTGATAAGACAAAGCATTGGGGTGATTTGGAGGAAGAGGAAGAGGAAGAAGAGGAGGAGGAAGAGGAAGAACTGATGGAGGACGAAGATTTAGAGGATGGTATTGAATCTGTAGATAGCATTTCAAGGTACATGCTTTCCCATTTTCATTTTGTATTAATACTTTGTGAAGTTCCTACTCCCACTGGTGTTGAGACACCTGATGTCATGGACCTTCGCAAGCAGCAGAGAAAGGAACCTGAAAGGCCTTTATACCAAGTACTTGAAGAGAAAGAAGAAAGGGTTGCCTCAGGGACATTGCTTGGAACGACTCACACCTATGTTGTTGGTAGTGGCACGCAAGACAAAGCAGGAGCTAAAAGGGTGGATCTACTCAGAGGTCAGAAAGCAGATAAAGTGGATGTCACTCTACAACCTGAAGAATTGGAAGCTATGGAGAATGTCTTGCCTGAAAAGTATGAACAAGCAAGGGAGGAGGAGAAGCTGCGGAGTCAGCGAGAGGATTTCAGTGATATGGTTGCGGAGAATGAGAAGAAGAGGAAACGTAAGATGCAGGACAAGGAAGGGAAATCCAACAAAAAGAAAGATTTCAAGTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005686 GO:0005689 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0030532 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0070013 GO:0071011 GO:0071013 GO:0071704 GO:0090304 GO:0097525 GO:0120114 GO:1901360 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DUF382 PSP

Protein Analysis

591

Amino Acids

68.11

Weight (kDa)

5.34

Isoelectric Point (pI)

58.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF382	PF04037	167 - 292	9.1e-60	Domain of unknown function (DUF382)
PSP	PF04046	301 - 346	1e-22	PSP

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004036)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11520 AT4G21660 AT4G21660 AT4G21660
fragaria_vesca	FvH4_3g04740 FvH4_6g45300
malus_domestica	MD05G1318200.v1.1 MD10G1297600.v1.1
prunus_persica	Prupe.4G042600_v2.0.a1 Prupe.4G042600_v2.0.a1
pyrus_communis	pycom05g29460 pycom10g25110
rosa_chinensis	RchiOBHm_Chr2g0163041 RchiOBHm_Chr5g0007761
rosa_laevigata	RLG00000021367 RLG00000031486
rosa_multiflora	Rmu_co8286435.1_g000001 Rmu_co8351911.1_g000001 Rmu_sc0005098.1_g000019 Rmu_sc0007039.1_g000007
rosa_roxburghii	Rroxscaffold_1G00068650 Rroxscaffold_2G00087600
rosa_rugosa	Rorug02G0500000.1 Rorug04G0430100
rosa_samantha	Rh2AG566300 Rh2BG578600 Rh2CG548500 Rh5AG058500 Rh5BG055300 Rh5CG065100 Rh5DG054300
rosa_wichuraiana	Rw2G046870 Rw5G006120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	4 cut(s)	35, 74, 586, 600
AccBSI	CCGCTC	1 cut(s)	64
AciI	CCGC	6 cut(s)	62, 159, 323, 1047, 1663, 1697
AclWI	GGATC	3 cut(s)	197, 533, 1551
AcoI	YGGCCR	1 cut(s)	1108
AcsI	RAATTY	3 cut(s)	291, 302, 614
AcuI	CTGAAG	2 cut(s)	414, 1614
AcyI	GRCGYC	3 cut(s)	36, 75, 106
AdeI	CACNNNGTG	1 cut(s)	851
AfaI	GTAC	6 cut(s)	569, 582, 821, 860, 1307, 1437
AfiI	CCNNNNNNNGG	2 cut(s)	770, 1121
AgeI	ACCGGT	1 cut(s)	583
AjnI	CCWGG	3 cut(s)	904, 1024, 1072
AloI	GAACNNNNNNTCC	2 cut(s)	266, 298
Alw21I	GWGCWC	1 cut(s)	958
Alw26I	GTCTC	4 cut(s)	5, 357, 1119, 1364
AlwI	GGATC	3 cut(s)	197, 533, 1551
AoxI	GGCC	3 cut(s)	500, 1108, 1421
ApeKI	GCWGC	7 cut(s)	320, 533, 674, 760, 1144, 1399, 1660
ApoI	RAATTY	3 cut(s)	291, 302, 614
AseI	ATTAAT	2 cut(s)	975, 1334
AsiGI	ACCGGT	1 cut(s)	583
Asp700I	GAANNNNTTC	2 cut(s)	293, 1763
AspLEI	GCGC	3 cut(s)	38, 77, 465
AspS9I	GGNCC	3 cut(s)	501, 992, 1387
AsuHPI	GGTGA	2 cut(s)	863, 1211
AsuII	TTCGAA	1 cut(s)	297
AsuNHI	GCTAGC	1 cut(s)	1055
AvaII	GGWCC	2 cut(s)	992, 1387
AxyI	CCTNAGG	1 cut(s)	1465
BalI	TGGCCA	1 cut(s)	1110
BanI	GGYRCC	4 cut(s)	35, 74, 586, 600
BbsI	GAAGAC	1 cut(s)	273
Bbv12I	GWGCWC	1 cut(s)	958
BbvI	GCAGC	7 cut(s)	307, 545, 661, 772, 1156, 1411, 1647
BccI	CCATC	5 cut(s)	763, 944, 1009, 1246, 1268
BceAI	ACGGC	8 cut(s)	23, 49, 62, 64, 88, 93, 193, 476
BciT130I	CCWGG	3 cut(s)	906, 1026, 1074
BcoDI	GTCTC	4 cut(s)	5, 357, 1119, 1364
BfaI	CTAG	1 cut(s)	1056
BfmI	CTRYAG	2 cut(s)	531, 1287
BfoI	RGCGCY	2 cut(s)	39, 78
BglII	AGATCT	1 cut(s)	489
BisI	GCNGC	7 cut(s)	321, 534, 675, 761, 1145, 1400, 1661
BlpI	GCTNAGC	1 cut(s)	255
BlsI	GCNGC	7 cut(s)	322, 535, 676, 762, 1146, 1401, 1662
BmcAI	AGTACT	1 cut(s)	1437
Bme1390I	CCNGG	3 cut(s)	906, 1026, 1074
Bme18I	GGWCC	2 cut(s)	992, 1387
BmgT120I	GGNCC	3 cut(s)	501, 992, 1387
BmiI	GGNNCC	6 cut(s)	37, 76, 364, 588, 602, 1413
BmrFI	CCNGG	3 cut(s)	906, 1026, 1074
BmsI	GCATC	3 cut(s)	514, 796, 1716
BmtI	GCTAGC	1 cut(s)	1059
BpiI	GAAGAC	1 cut(s)	273
BplI	GAGNNNNNCTC	1 cut(s)	34
BpmI	CTGGAG	1 cut(s)	1071
Bpu1102I	GCTNAGC	1 cut(s)	255
Bpu14I	TTCGAA	1 cut(s)	297
BpuEI	CTTGAG	1 cut(s)	339
BsaHI	GRCGYC	3 cut(s)	36, 75, 106
BsaJI	CCNNGG	4 cut(s)	590, 965, 1024, 1025
BsaWI	WCCGGW	2 cut(s)	570, 583
Bsc4I	CCNNNNNNNGG	2 cut(s)	770, 1121
Bse118I	RCCGGY	2 cut(s)	583, 1174
Bse1I	ACTGG	2 cut(s)	685, 1366
Bse21I	CCTNAGG	1 cut(s)	1465
Bse3DI	GCAATG	2 cut(s)	669, 1472
BseBI	CCWGG	3 cut(s)	906, 1026, 1074
BseDI	CCNNGG	4 cut(s)	590, 965, 1024, 1025
BseGI	GGATG	5 cut(s)	280, 529, 1069, 1279, 1582
BseLI	CCNNNNNNNGG	2 cut(s)	770, 1121
BseMI	GCAATG	2 cut(s)	669, 1472
BseMII	CTCAG	4 cut(s)	35, 246, 1479, 1564
BseNI	ACTGG	2 cut(s)	685, 1366
BseXI	GCAGC	7 cut(s)	307, 545, 661, 772, 1156, 1411, 1647
BseYI	CCCAGC	1 cut(s)	1080
BshFI	GGCC	3 cut(s)	502, 1110, 1423
BshNI	GGYRCC	4 cut(s)	35, 74, 586, 600
BshTI	ACCGGT	1 cut(s)	583
BsiHKAI	GWGCWC	1 cut(s)	958
BsiSI	CCGG	3 cut(s)	571, 584, 1175
BslFI	GGGAC	1 cut(s)	1483
BslI	CCNNNNNNNGG	2 cut(s)	770, 1121
BsmAI	GTCTC	4 cut(s)	5, 357, 1119, 1364
BsmBI	CGTCTC	2 cut(s)	5, 1119
BsmFI	GGGAC	1 cut(s)	1483
BsmI	GAATGC	2 cut(s)	322, 1039
BsnI	GGCC	3 cut(s)	502, 1110, 1423
Bsp119I	TTCGAA	1 cut(s)	297
Bsp1286I	GDGCHC	1 cut(s)	958
Bsp143I	GATC	8 cut(s)	52, 96, 202, 489, 538, 853, 1150, 1543
Bsp1720I	GCTNAGC	1 cut(s)	255
Bsp19I	CCATGG	1 cut(s)	965
BspACI	CCGC	6 cut(s)	62, 159, 323, 1047, 1663, 1697
BspANI	GGCC	3 cut(s)	502, 1110, 1423
BspCNI	CTCAG	4 cut(s)	34, 247, 1478, 1563
BspHI	TCATGA	1 cut(s)	802
BspLI	GGNNCC	6 cut(s)	37, 76, 364, 588, 602, 1413
BspMAI	CTGCAG	1 cut(s)	535
BspOI	GCTAGC	1 cut(s)	1059
BspPI	GGATC	3 cut(s)	197, 533, 1551
BspQI	GCTCTTC	1 cut(s)	1164
BspT104I	TTCGAA	1 cut(s)	297
BspT107I	GGYRCC	4 cut(s)	35, 74, 586, 600
BsrBI	CCGCTC	1 cut(s)	64
BsrDI	GCAATG	2 cut(s)	669, 1472
BsrFI	RCCGGY	2 cut(s)	583, 1174
BsrI	ACTGG	2 cut(s)	685, 1366
BssAI	RCCGGY	2 cut(s)	583, 1174
BssECI	CCNNGG	4 cut(s)	590, 965, 1024, 1025
BssMI	GATC	8 cut(s)	52, 96, 202, 489, 538, 853, 1150, 1543
BssNI	GRCGYC	3 cut(s)	36, 75, 106
BssT1I	CCWWGG	2 cut(s)	590, 965
Bst2UI	CCWGG	3 cut(s)	906, 1026, 1074
Bst4CI	ACNGT	3 cut(s)	580, 651, 1116
Bst6I	CTCTTC	8 cut(s)	390, 1164, 1206, 1212, 1221, 1233, 1437, 1706
BstACI	GRCGYC	3 cut(s)	36, 75, 106
BstBI	TTCGAA	1 cut(s)	297
BstC8I	GCNNGC	7 cut(s)	6, 66, 163, 911, 1057, 1397, 1514
BstDEI	CTNAG	5 cut(s)	21, 255, 828, 1465, 1550
BstDSI	CCRYGG	1 cut(s)	965
BstF5I	GGATG	5 cut(s)	280, 529, 1069, 1279, 1582
BstH2I	RGCGCY	2 cut(s)	39, 78
BstHHI	GCGC	3 cut(s)	38, 77, 465
BstKTI	GATC	8 cut(s)	55, 99, 205, 492, 541, 856, 1153, 1546
BstMAI	GTCTC	4 cut(s)	5, 357, 1119, 1364
BstMBI	GATC	8 cut(s)	52, 96, 202, 489, 538, 853, 1150, 1543
BstMWI	GCNNNNNNNGC	8 cut(s)	22, 74, 171, 460, 533, 910, 1153, 1669
BstNI	CCWGG	3 cut(s)	906, 1026, 1074
BstNSI	RCATGY	2 cut(s)	913, 1312
BstSCI	CCNGG	3 cut(s)	904, 1024, 1072
BstSFI	CTRYAG	2 cut(s)	531, 1287
BstV1I	GCAGC	7 cut(s)	307, 545, 661, 772, 1156, 1411, 1647
BstV2I	GAAGAC	1 cut(s)	273
BstX2I	RGATCY	2 cut(s)	489, 1543
BstXI	CCANNNNNNTGG	2 cut(s)	597, 1080
BstYI	RGATCY	2 cut(s)	489, 1543
Bsu36I	CCTNAGG	1 cut(s)	1465
BsuRI	GGCC	3 cut(s)	502, 1110, 1423
BtgI	CCRYGG	1 cut(s)	965
BtsCI	GGATG	5 cut(s)	280, 529, 1069, 1279, 1582
BtsIMutI	CAGTG	2 cut(s)	1359, 1690
Cac8I	GCNNGC	7 cut(s)	6, 66, 163, 911, 1057, 1397, 1514
CciI	TCATGA	1 cut(s)	802
CfoI	GCGC	3 cut(s)	38, 77, 465
Cfr10I	RCCGGY	2 cut(s)	583, 1174
Cfr13I	GGNCC	3 cut(s)	501, 992, 1387
CseI	GACGC	2 cut(s)	22, 114
Csp6I	GTAC	6 cut(s)	568, 581, 820, 859, 1306, 1436
CspAI	ACCGGT	1 cut(s)	583
CspCI	CAANNNNNGTGG	2 cut(s)	1348, 1383
CviAII	CATG	9 cut(s)	271, 466, 803, 863, 910, 920, 966, 1309, 1384
CviQI	GTAC	6 cut(s)	568, 581, 820, 859, 1306, 1436
DdeI	CTNAG	5 cut(s)	21, 255, 828, 1465, 1550
DinI	GGCGCC	2 cut(s)	37, 76
DpnI	GATC	8 cut(s)	54, 98, 204, 491, 540, 855, 1152, 1545
DpnII	GATC	8 cut(s)	52, 96, 202, 489, 538, 853, 1150, 1543
DraIII	CACNNNGTG	1 cut(s)	851
EaeI	YGGCCR	1 cut(s)	1108
Eam1104I	CTCTTC	8 cut(s)	390, 1164, 1206, 1212, 1221, 1233, 1437, 1706
EarI	CTCTTC	8 cut(s)	390, 1164, 1206, 1212, 1221, 1233, 1437, 1706
Eco130I	CCWWGG	2 cut(s)	590, 965
Eco147I	AGGCCT	1 cut(s)	1423
Eco47I	GGWCC	2 cut(s)	992, 1387
Eco57I	CTGAAG	2 cut(s)	414, 1614
Eco81I	CCTNAGG	1 cut(s)	1465
EcoRII	CCWGG	3 cut(s)	904, 1024, 1072
EcoT14I	CCWWGG	2 cut(s)	590, 965
EgeI	GGCGCC	2 cut(s)	37, 76
EheI	GGCGCC	2 cut(s)	37, 76
ErhI	CCWWGG	2 cut(s)	590, 965
Esp3I	CGTCTC	2 cut(s)	5, 1119
FaeI	CATG	9 cut(s)	274, 469, 806, 866, 913, 923, 969, 1312, 1387
FaqI	GGGAC	1 cut(s)	1483
FatI	CATG	9 cut(s)	270, 465, 802, 862, 909, 919, 965, 1308, 1383
FauI	CCCGC	3 cut(s)	69, 316, 1054
Fnu4HI	GCNGC	7 cut(s)	321, 534, 675, 761, 1145, 1400, 1661
FokI	GGATG	5 cut(s)	287, 536, 1056, 1286, 1589
Fsp4HI	GCNGC	7 cut(s)	321, 534, 675, 761, 1145, 1400, 1661
FspBI	CTAG	1 cut(s)	1056
GlaI	GCGC	3 cut(s)	37, 76, 464
GluI	GCNGC	7 cut(s)	321, 534, 675, 761, 1145, 1400, 1661
GsaI	CCCAGC	1 cut(s)	1084
GsuI	CTGGAG	1 cut(s)	1071
HaeII	RGCGCY	2 cut(s)	39, 78
HaeIII	GGCC	3 cut(s)	502, 1110, 1423
HapII	CCGG	3 cut(s)	571, 584, 1175
HgaI	GACGC	2 cut(s)	22, 114
HhaI	GCGC	3 cut(s)	38, 77, 465
Hin1I	GRCGYC	3 cut(s)	36, 75, 106
Hin1II	CATG	9 cut(s)	274, 469, 806, 866, 913, 923, 969, 1312, 1387
Hin6I	GCGC	3 cut(s)	36, 75, 463
HinP1I	GCGC	3 cut(s)	36, 75, 463
HindIII	AAGCTT	2 cut(s)	141, 452
HinfI	GANTC	6 cut(s)	350, 383, 389, 1283, 1486, 1666
HpaII	CCGG	3 cut(s)	571, 584, 1175
HphI	GGTGA	2 cut(s)	863, 1211
Hpy166II	GTNNAC	1 cut(s)	629
Hpy188I	TCNGA	6 cut(s)	57, 114, 388, 394, 1553, 1560
Hpy188III	TCNNGA	7 cut(s)	245, 286, 313, 356, 640, 662, 803
Hpy8I	GTNNAC	1 cut(s)	629
Hpy99I	CGWCG	5 cut(s)	44, 108, 114, 170, 179
HpyAV	CCTTC	6 cut(s)	184, 353, 370, 860, 1400, 1733
HpyCH4III	ACNGT	3 cut(s)	580, 651, 1116
HpyCH4IV	ACGT	5 cut(s)	168, 631, 754, 1128, 1720
HpyCH4V	TGCA	8 cut(s)	476, 497, 527, 533, 677, 760, 982, 1729
HpyF10VI	GCNNNNNNNGC	8 cut(s)	22, 74, 171, 460, 533, 910, 1153, 1669
HpyF3I	CTNAG	5 cut(s)	21, 255, 828, 1465, 1550
HpySE526I	ACGT	5 cut(s)	168, 631, 754, 1128, 1720
Hsp92I	GRCGYC	3 cut(s)	36, 75, 106
Hsp92II	CATG	9 cut(s)	274, 469, 806, 866, 913, 923, 969, 1312, 1387
HspAI	GCGC	3 cut(s)	36, 75, 463
KasI	GGCGCC	2 cut(s)	35, 74
Kzo9I	GATC	8 cut(s)	52, 96, 202, 489, 538, 853, 1150, 1543
LguI	GCTCTTC	1 cut(s)	1164
LmnI	GCTCC	5 cut(s)	362, 961, 1042, 1052, 1529
Lsp1109I	GCAGC	7 cut(s)	307, 545, 661, 772, 1156, 1411, 1647
LweI	GCATC	3 cut(s)	514, 796, 1716
MaeI	CTAG	1 cut(s)	1056
MaeII	ACGT	5 cut(s)	168, 631, 754, 1128, 1720
MaeIII	GTNAC	2 cut(s)	915, 1579
MalI	GATC	8 cut(s)	54, 98, 204, 491, 540, 855, 1152, 1545
MbiI	CCGCTC	1 cut(s)	64
MboI	GATC	8 cut(s)	52, 96, 202, 489, 538, 853, 1150, 1543
MflI	RGATCY	2 cut(s)	489, 1543
MhlI	GDGCHC	1 cut(s)	958
MlsI	TGGCCA	1 cut(s)	1110
MluNI	TGGCCA	1 cut(s)	1110
Mly113I	GGCGCC	2 cut(s)	36, 75
MlyI	GAGTC	3 cut(s)	359, 1480, 1675
MmeI	TCCRAC	2 cut(s)	92, 1773
Mox20I	TGGCCA	1 cut(s)	1110
MroXI	GAANNNNTTC	2 cut(s)	293, 1763
MscI	TGGCCA	1 cut(s)	1110
MseI	TTAA	4 cut(s)	81, 890, 975, 1334
MslI	CAYNNNNRTG	4 cut(s)	977, 1074, 1197, 1494
Msp20I	TGGCCA	1 cut(s)	1110
MspA1I	CMGCKG	2 cut(s)	536, 1049
MspI	CCGG	3 cut(s)	571, 584, 1175
MspR9I	CCNGG	3 cut(s)	906, 1026, 1074
Mva1269I	GAATGC	2 cut(s)	322, 1039
MvaI	CCWGG	3 cut(s)	906, 1026, 1074
MwoI	GCNNNNNNNGC	8 cut(s)	22, 74, 171, 460, 533, 910, 1153, 1669
NarI	GGCGCC	2 cut(s)	36, 75
NcoI	CCATGG	1 cut(s)	965
NdeII	GATC	8 cut(s)	52, 96, 202, 489, 538, 853, 1150, 1543
NheI	GCTAGC	1 cut(s)	1055
NlaIII	CATG	9 cut(s)	274, 469, 806, 866, 913, 923, 969, 1312, 1387
NlaIV	GGNNCC	6 cut(s)	37, 76, 364, 588, 602, 1413
NmeAIII	GCCGAG	1 cut(s)	34
NmuCI	GTSAC	2 cut(s)	915, 1579
NspI	RCATGY	2 cut(s)	913, 1312
NspV	TTCGAA	1 cut(s)	297
PaeI	GCATGC	1 cut(s)	913
PagI	TCATGA	1 cut(s)	802
PasI	CCCWGGG	1 cut(s)	1025
PceI	AGGCCT	1 cut(s)	1423
PciSI	GCTCTTC	1 cut(s)	1164
PcsI	WCGNNNNNNNCGW	1 cut(s)	48
PctI	GAATGC	2 cut(s)	322, 1039
PdmI	GAANNNNTTC	2 cut(s)	293, 1763
PfeI	GAWTC	3 cut(s)	383, 389, 1283
PflFI	GACNNNGTC	1 cut(s)	108
PinAI	ACCGGT	1 cut(s)	583
PkrI	GCNGC	7 cut(s)	322, 535, 676, 762, 1146, 1401, 1662
PleI	GAGTC	3 cut(s)	358, 1480, 1674
PluTI	GGCGCC	2 cut(s)	39, 78
PpsI	GAGTC	3 cut(s)	358, 1480, 1674
PshBI	ATTAAT	2 cut(s)	975, 1334
Psp6I	CCWGG	3 cut(s)	904, 1024, 1072
PspFI	CCCAGC	1 cut(s)	1080
PspGI	CCWGG	3 cut(s)	904, 1024, 1072
PspN4I	GGNNCC	6 cut(s)	37, 76, 364, 588, 602, 1413
PspPI	GGNCC	3 cut(s)	501, 992, 1387
PstI	CTGCAG	1 cut(s)	535
PsuI	RGATCY	2 cut(s)	489, 1543
PsyI	GACNNNGTC	1 cut(s)	108
PvuII	CAGCTG	1 cut(s)	536
RsaI	GTAC	6 cut(s)	569, 582, 821, 860, 1307, 1437
RsaNI	GTAC	6 cut(s)	568, 581, 820, 859, 1306, 1436
RseI	CAYNNNNRTG	4 cut(s)	977, 1074, 1197, 1494
SapI	GCTCTTC	1 cut(s)	1164
SaqAI	TTAA	4 cut(s)	81, 890, 975, 1334
SatI	GCNGC	7 cut(s)	321, 534, 675, 761, 1145, 1400, 1661
Sau3AI	GATC	8 cut(s)	52, 96, 202, 489, 538, 853, 1150, 1543
Sau96I	GGNCC	3 cut(s)	501, 992, 1387
ScaI	AGTACT	1 cut(s)	1437
SchI	GAGTC	3 cut(s)	359, 1480, 1675
ScrFI	CCNGG	3 cut(s)	906, 1026, 1074
SduI	GDGCHC	1 cut(s)	958
SfaNI	GCATC	3 cut(s)	514, 796, 1716
SfcI	CTRYAG	2 cut(s)	531, 1287
SfoI	GGCGCC	2 cut(s)	37, 76
SfuI	TTCGAA	1 cut(s)	297
SinI	GGWCC	2 cut(s)	992, 1387
SmiMI	CAYNNNNRTG	4 cut(s)	977, 1074, 1197, 1494
SmlI	CTYRAG	1 cut(s)	354
SmoI	CTYRAG	1 cut(s)	354
SphI	GCATGC	1 cut(s)	913
SseBI	AGGCCT	1 cut(s)	1423
SsiI	CCGC	6 cut(s)	62, 159, 323, 1047, 1663, 1697
SspDI	GGCGCC	2 cut(s)	35, 74
SspMI	CTAG	1 cut(s)	1056
StuI	AGGCCT	1 cut(s)	1423
StyD4I	CCNGG	3 cut(s)	904, 1024, 1072
StyI	CCWWGG	2 cut(s)	590, 965
TaaI	ACNGT	3 cut(s)	580, 651, 1116
TaiI	ACGT	5 cut(s)	171, 634, 757, 1131, 1723
TaqI	TCGA	4 cut(s)	99, 234, 297, 639
TatI	WGTACW	1 cut(s)	1435
TfiI	GAWTC	3 cut(s)	383, 389, 1283
Tru1I	TTAA	4 cut(s)	81, 890, 975, 1334
Tru9I	TTAA	4 cut(s)	81, 890, 975, 1334
TscAI	CASTG	2 cut(s)	1366, 1690
TseFI	GTSAC	2 cut(s)	915, 1579
TseI	GCWGC	7 cut(s)	320, 533, 674, 760, 1144, 1399, 1660
Tsp45I	GTSAC	2 cut(s)	915, 1579
TspRI	CASTG	2 cut(s)	1366, 1690
Tth111I	GACNNNGTC	1 cut(s)	108
VpaK11BI	GGWCC	2 cut(s)	992, 1387
VspI	ATTAAT	2 cut(s)	975, 1334
XapI	RAATTY	3 cut(s)	291, 302, 614
XceI	RCATGY	2 cut(s)	913, 1312
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1118
XmnI	GAANNNNTTC	2 cut(s)	293, 1763
XspI	CTAG	1 cut(s)	1056
ZrmI	AGTACT	1 cut(s)	1437

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.